These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9653#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1308 fasta sequence [TCGCCCGCCTCCGAGCAGTTGGGGAAGAGAACCGAAGCACAAACCCTAGCGGCGGCGCAGCTCAGCCGGGGTTTGCGGAGGAAGGGGAGGGGCACCGCCCGCGATGCTCGCGGCGTCGGCTCGGCGGGTGGCGGCCGCCGCCGCCGCGTCGTCCTCCCATTCCAGGCTCGCCAACCAGCTCGCCCACGCGCTGAATCCGCAGAGGTGGATCCATGACCGGAACAAGAAGGCGATGGAGTTGGTGGCCAAGGGGTGGAGCGCCCTGCAGGAGGTTGATCGCGTCATCGACTACGCCGACCGCAACGACAAGCGCCTGATCCCACTTCTCAGGGGTGCAAAGGAAAATTTTGAGCTGGCTCTGGAGATCGACAATATGAACACTCATGCGAGATTATGGCTTGCCAAGATGCATTTCAAGTATCATGTTCCTGGAGCTTGTAAGGCCATTGGTGCTGCTCTGTTGGTTGAAGCTGCAAACATGGGTGATCCAGATGCACAGTATGAACTTGGATGCCATTTGAGAATTGAGAATGACTACGTTCACTCTGACCAACAGGCTTTTTATTACATTGAGAAAGCTGTTGACCAGTTGCACCCTGGTGCTTTGTATCTTCTAGGTGCTGTATATTTAACTGGAGACTGTGTTAAGAGGGATATAGCTTCAGCAATGTGGTGTTTCCACAGAGCATCAGAAAAGGGACACTCTGGAGCTGCAATTGCATATGGATCACTTCTATTAAAAGGTGCTGAAGTGCCTGAGGTTATTACCAGGTTCAACTCAGGTAAGAGTCCATCAACTGGAAAGATGCGAAAAAGGCCCATACAGCA-GGATCCAGTGAAGC-TAGCAAAGGAGCAGTTTCAAA-TTGCAGCTGAAGCTGGATGTGATCTCGGTTTGCGATGGCTGAAGAGGCTTGGGGATTATGAAAAGCAGCAAGAACAACCAAAGCAAATCCAGCAATGACCACCTTCGAAATGATTTGCTTCACTTCGGCATTGCTCTATGTTGACATGCGTTTGTCATACACACTATACAGGTAGAACGTCAGATTCTCAACTGTAATCATGTAATTGAATCCAAGCACTATGTAAATTTTGATATCTGGCCCAACTCCTTGAAAAGGTAGACTTGAGTTGATCCCCTTTCTCTACAAAGGATTTTTATCGTACCAGTCCTTATAGAGTTCGTTACTTTGTTTTTTCACTTTTTCTCCCCAACTGTCTACTGGTATAACCTGTTACATGTCCCTTAATTATTCCCCGGTGTGTCAGAAAAGTGTTTAAATTCAAGCATACATGAAAAAACTGGAC] [+] EMBL AK068376 [TCGCCCGCCTCCGAGCAGTTGGGGAAGAGAACCGAAGCACAAACCCTAGCGGCGGCGCAGCTCAGCCGGGGTTTGCGGAGGAAGGGGAGGGGCACCGCCCGCGATGCTCGCGGCGTCGGCTCGGCGGGTGGCGGCCGCCGCCGCCGCGTCGTCCTCCCATTCCAGGCTCGCCAACCAGCTCGCCCACGCGCTGAATCCGCAGAGGTGGATCCATGACCGGAACAAGAAGGCGATGGAGTTGGTGGCCAAGGGGTGGAGCGCCCTGCAGGAGGTTGATCGCGTCATCGACTACGCCGACCGCAACGACAAGCGCCTGATCCCACTTCTCAGGGGTGCAAAGGAAAATTTTGAGCTGGCTCTGGAGATCGACAATATGAACACTCATGCGAGATTATGGCTTGCCAAGATGCATTTCAAGTATCATGTTCCTGGAGCTTGTAAGGCCATTGGTGCTGCTCTGTTGGTTGAAGCTGCAAACATGGGTGATCCAGATGCACAGTATGAACTTGGATGCCATTTGAGAATTGAGAATGACTACGTTCACTCTGACCAACAGGCTTTTTATTACATTGAGAAAGCTGTTGACCAGTTGCACCCTGGTGCTTTGTATCTTCTAGGTGCTGTATATTTAACTGGAGACTGTGTTAAGAGGGATATAGCTTCAGCAATGTGGTGTTTCCACAGAGCATCAGAAAAGGGACACTCTGGAGCTGCAATTGCATATGGATCACTTCTATTAAAAGGTGCTGAAGTGCCTGAGGTTATTACCAGGTTCAACTCAGGTAAGAGTCCATCAACTGGAAAGATGCGAAAAAGGCCCATACAGCA GGATCCAGTGAAGC TAGCAAAGGAGCAGTTTCAAA TTGCAGCTGAAGCTGGATGTGATCTCGGTTTGCGATGGCTGAAGAGGCTTGGGGATTATGAAAAGCAGCAAGAACAACCAAAGCAAATCCAGCAATGACCACCTTCGAAATGATTTGCTTCACTTCGGCATTGCTCTATGTTGACATGCGTTTGTCATACACACTATACAGGTAGAACGTCAGATTCTCAACTGTAATCATGTAATTGAATCCAAGCACTATGTAAATTTTGATATCTGGCCCAACTCCTTGAAAAGGTAGACTTGAGTTGATCCCCTTTCTCTACAAAGGATTTTTATCGTACCAGTCCTTATAGAGTTCGTTACT ] [+] EMBL AK101844 [ GAACCGAAGCACAAACCCTAGCGGCGGCGCAGCTCAGCCGGGGTTTGCGGAGGAAGGGGAGGGGCACCGCCCGCGATGCTCGCGGCGTCGGCTCGGCGGGTGGCGGCCGCCGCCGCCGCGTCGTCCTCCCATTCCAGGCTCGCCAACCAGCTCGCCCACGCGCTGAATCCGCAGAGGTGGATCCATGACCGGAACAAGAAGGCGATGGAGTTGGTGGCCAAGGGGTGGAGCGCCCTGCAGGAGGTTGATCGCGTCATCGACTACGCCGACCGCAACGACAAGCGCCTGATCCCACTTCTCAGGGGTGCAAAGGAAAATTTTGAGCTGGCTCTGGAGATCGACAATATGAACACTCATGCGAGATTATGGCTTGCCAAGATGCATTTCAAGTATCATGTTCCTGGAGCTTGTAAGGCCATTGGTGCTGCTCTGTTGGTTGAAGCTGCAAACATGGGTGATCCAGATGCACAGTATGAACTTGGATGCCATTTGAGAATTGAGAATGACTACGTTCACTCTGACCAACAGGCTTTTTATTACATTGAGAAAGCTGTTGACCAGTTGCACCCTGGTGCTTTGTATCTTCTAGGTGCTGTATATTTAACTGGAGACTGTGTTAAGAGGGATATAGCTTCAGCAATGTGGTGTTTCCACAGAGCATCAGAAAAGGGACACTCTGGAGCTGCAATTGCATATGGATCACTTCTATTAAAAGGTGCTGAAGTGCCTGAGGTTATTACCAGGTTCAACTCAGGTAAGAGTCCATCAACTGGAAAGATGCGAAAAAGGCCCATACAGCA GGATCCAGTGAAGC TAGCAAAGGAGCAGTTTCAAA TTGCAGCTGAAGCTGGATGTGATCTCGGTTTGCGATGGCTGAAGAGGCTTGGGGATTATGAAAAGCAGCAAGAACAACCAAAGCAAATCCAGCAATGACCACCTTCGAAATGATTTGCTTCACTTCGGCATTGCTCTATGTTGACATGCGTTTGTCATACACACTATACAGGTAGAACGTCAGATTCTCAACTGTAATCATGTAATTGAATCCAAGCACTATGTAAATTTTGATATCTGGCCCAACTCCTTGAAAAGGTAGACTTGAGTTGATCCCCTTTCTCTACAAAGGATTTTTATCGTACCAGTCCTTATAGAGTTCGTTACTTTGTTTTTTCACTTTTTCTCCCCAACTGTCTACTGGTATAACCTGTTACATGTCCCTTAATTATTCCCCGGTGTGTCAGAAAAGTGTTTAAATTCAAGCATACATGAAAAAACTGGAC] [+] EMBL AK099277 [ GAACCGAAGCACAAACCCTAGCGGCGGCGCAGCTCAGCCGGGGTTTGCGGAGGAAGGGGAGGGGCACCGCCCGCGATGCTCGCGGCGTCGGCTCGGCGGGTGGCGGCCGCCGCCGCCGCGTCGTCCTCCCATTCCAGGCTCGCCAACCAGCTCGCCCACGCGCTGAATCCGCAGAGGTGGATCCATGACCGGAACAAGAAGGCGATGGAGTTGGTGGCCAAGGGGTGGAGCGCCCTGCAGGAGGTTGATCGCGTCATCGACTACGCCGACCGCAACGACAAGCGCCTGATCCCACTTCTCAGGGGTGCAAAGGAAAATTTTGAGCTGGCTCTGGAGATCGACAATATGAACACTCATGCGAGATTATGGCTTGCCAAGATGCATTTCAAGTATCATGTTCCTGGAGCTTGTAAGGCCATTGGTGCTGCTCTGTTGGTTGAAGCTGCAAACATGGGTGATCCAGATGCACAGTATGAACTTGGATGCCATTTGAGAATTGAGAATGACTACGTTCACTCTGACCAACAGGCTTTTTATTACATTGAGAAAGCTGTTGACCAGTTGCACCCTGGTGCTTTGTATCTTCTAGGTGCTGTATATTTAACTGGAGACTGTGTTAAGAGGGATATAGCTTCAGCAATGTGGTGTTTCCACAGAGCATCAGAAAAGGGACACTCTGGAGCTGCAATTGCATATGGATCACTTCTATTAAAAGGTGCTGAAGTGCCTGAGGTTATTACCAGGTTCAACTCAGGTAAGAGTCCATCAACTGGAAAGATGCGAAAAAGGCCCATACAGCA GGATCCAGTGAAGC TAGCAAAGGAGCAGTTTCAAA TTGCAGCTGAAGCTGGATGTGATCTCGGTTTGCGATGGCTGAAGAGGCTTGGGGATTATGAAAAGCAGCAAGAACAACCAAAGCAAATCCAGCAATGACCACCTTCGAAATGATTTGCTTCACTTCGGCATTGCTCTATGTTGACATGCGTTTGTCATACACACTATACAGGTAGAACGTCAGATTCTCAACTGTAATCATGTAATTGAATCCAAGCACTATGTAAATTTTGATATCTGGCCCAACTCCTTGAAAAGGTAGACTTGAGTTGATCCCCTTTCTCTACAAAGGATTT ] [-] EMBL AU175049 [ TCGTCCTCCCATTCCAGGCTCGCCAACCAGCTCGCCCACGCGCTGAATCCGCAGAGGTGGATCCATGACCGGAACAAGAAGGCGATGGAGTTGGTGGCCAAGGGGTGGAGCGCCCTGCAGGAGGTTGATCGCGTCATCGACTACGCCGACCGCAACGACAAGCGCCTGATCCCACTTCTCAGGGGTGCAAAGGAAAATTTTGAGCTGGCTCTGGAGATCGACAATATGAACACTCATGCGAGATTATGGCTTGCCAAGATGCATTTCAAGTATCATGTTCCTGGAGCTTGTAAGGCCATTGGTGCTGCTCTGTTGGTTGAAGCTGCAAACATGGGTGATCCAGATGCACAGTATGAACTTGGATGCCATTTGAGAATTGAGAATGACTACGTTCACTCTGACCA ] [+] EMBL CF303248 [ CCACGCGCTGAATCCGCAGAGGTGGATCCATGACCGGAACAAGAAGGCGATGGAGTTGGTGGCCAAGGGGTGGAGCGCCCTGCAGGAGGTTGATCGCGTCATCGACTACGCCGACCGCAACGACAAGCGCCTGATCCCACTTCTCAGGGGTGCAAAGGAAAATTTTGAGCTGGCTCTGGAGATCGACAATATGAACACTCATGCGAGATTATGGCTTGCCAAGATGCATTTCAAGTATCATGTTCCTGGAGCTTGTAAGGCCATTGGTGCTGCTCTGTTGGTTGAAGCTGCAAACATGGGTGATCCAGATGCACAGTATGAACTTGGATGCCATTTGAGAATTGAGAATGACTACGTTCACTCTGACCAACAGGCTTTTTATTACATTGAGAAAGCTGTTGACCAGTTGCACCCTGGTGCTTTGTATCTTCTAGGTGCTGTATATTTAACTGGAGACTGTGTTAAGAGGGATATAGCTTCAGCAATGTGGTGTTTCCACAGAGCATCAGAAAAGGGACACTCTGGAGCTGCAATTGCATATGGATCACTTCTATTAAAAGGTGCTGAAGTGCCTGAGGTTATTACCAGGTTCAACTCAGGTAAGAGTCCATCAAC ] [-] EMBL C28698 [ cCCCANACAGCAGGGATCCAGTGAAGCTTAGCAAAGGAGCAGTTTNAAATTTGCA CTGAAGCTGGATGTGATCTCGGTTTGCGATGGCTGAAGAGGCTTGGGGATTATGAAAAGCAGCAAGAACAACCAAAGCAAATCCAGCAATGACCACCTTCGAAATGATTTGCTTCACTTCGGCATTGCTCTATGTTGACATGCGTTTGTCATACACACTATACAGGTAGAACGTCAGATTCTCAACTGTAATCATGTAATTGAATCCAAGCACTATGTAAATTTTGATATCTGGCCCAACTCCTTGAAAAGGTAGACTTGAGTTGATCCCCTTTCTCTACAAAGGATTTTTATCGTACCAGTCCTTATAGAGTTCGTTACTTTGTTTTTTCACTTTTTCTCCCCAACTGTCTACTGGT ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||