These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9656#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 3484 fasta sequence [GAGGCCTGATCACCACCCTCTCTCCTCCCCTTTCCCTGACCCCGCGACCGCGCCGCGCGAGGCGAACTCGCCACTCCGATCTCTCTCTCCGGCGACGCCGCCGCCGCCGCACAGGGTTTTGCTCTCTCTCGCGCGGAATGGAGAGCGGCGGGGTCGACGGCGAGAGGCCCCTGCTGCGCGAGGCGGGGGATTTGGGTGGCGAGGACGGCGGCGCAGGCGGAGTCCCCGAGGAGGGGGATGCGAAGGGCGATGTGATGGCGGCGGCGGCGGCGCAGGGGGGCGATGGCGATGAGGGTGTGGAGGCGGTAGATGGGGACGGGAGTAACGAGGAGGAGGAGGTTGTGCAGACGCCCGATGTGAAGCAGACGCCCGGCGCCGCGGCCGCGGCGGCCTGGCGGGAGGCGGCGTGGGAGGAGGCTGACGGCGAGGAGTTCGTGGATGTCTTGGAAGGGGACGTGGATGAGAAGCGTGAGGATGGATCGGCCTTGGAGAATGGGGAGGATTTGTTGGCCTCCCGTTCTCTCGCTGTCGAGGGTGACGAAGAAGGGTATGGTTCTTGTGCTGATATTGGTATAGAAGAAGACGCTGAGGGTGATGCGAGTCGGGAGCGCTTGGAGGAGGAAGCCATGACGGAATCAATCAGGGAGTATGTGACAGAAGCTGTTTTGGCTGACCATATCCAGGAGCAACCGGACAAATCGAAGAGTGAATCTGAACATGTGAAGGTTGCTCAGCACAAGTCGCAGATTGCGAAGAGCAGGGAAGAGGGACCCAAACAATCTGGAGGCGAACCGTCCGTTGTTGTCGAGGAATTGAATGGATCAAGCTCGTCTGATGATGAGAGTAAAGCTACCTCCGCTCCTCCTGCACGATCCATTAGTGGTGCTGCAGGTCGTTCTAATGGCCCCTCTTTGCCATCTCGTCCTGCTGGGCTTGGAGCATCGACTTCCTTGTCGCAGCCCTCAGCTCGACCTGTTCAGCAGACCCGCGCTAATGGTCCAGTCGCTGTGGACAGAGAAACTCGGCAGGATGTTGAATCTCCTGAGGATGGAGACGAAAATGATGAAATCCGTGAGAAACTCCAGATGATCCGGGTTAAGTTTCTGCGTCTTGCTAACAGGTTTGGGCAAACACCTAATAATATGGTGGTTTCTCAGGTTCTTTACCGACTTGGGCTGGCAGAACAGCTTAGAAGAAATACAGGCCAGGGTGTTTTTAGTTTTGACCGGGCACAAGATATGGCAGAACGTCTTGAAGCTGCTGGAAACGAGCCCCTTGATTTTTCTTGCACCATCTTGGTTCTTGGTAAAACTGGGGTTGGCAAGAGTGCTACCATCAATTCTATTTTTGATGATGTCCGGTTGGAAACAAATGCTTTTGATACCAGCACTAGAAAGGTTCAAGAAGTAGTTGGTGCAGTTGAGGGAATCAAAGTAAAAGTTATCGATACTCCTGGCCTGTCATGCTCATCTTCAGACCAGCACCACAACCAGAAGATTCTCAATTCTGTCAAGCGACTTATCAGCAGAAACCCTCCTGATATTGTTCTTTATTTTGATAGACTGGATATGCAGACCAGGGACTATGGTGATGTGCCTCTTCTGCAAACCATTACAAGAGTCTTTGGAGCATCAATCTGGTTCAATGCCATAGTTGTGCTAACTCATGCTGCATCTGCACCACCTGATGGTCTGAATGGAATTCCCCTGAGCTATGAGATGTTTGTAACCCAAAGGTCTCATGTAGTCCAGCAAGCTATAAGGCAAGCCGCTGGTGATGTCCGTCTTATGAATCCAGTGTCCCTGGTTGAAAACCACTCAGCGTGCAGGACCAATAGGGCAGGCCAGAGGGTGTTGCCAAATGGGCATGTCTGGAAACCACAGTTGCTATTGCTTTGTTTTGCCTCAAAGGTTTTAGCAGAGGCCAACGCGCTTCTCAAGCTGCAGGACAATCCTGCTGGTAAACCTCGTATGAGGATTCCTCCACTTCCTTTCCTATTGTCTTCGCTTCTTCAGTCTCGAGCCCCACTGAAGTTACCAGAGGAGCAGTTTGGTGATGATGATGATATTGAAGACGATTTGGCTGATGATTCGGATTCAGATGATGGTTCAGACTATGATGACTTGCCTCCTTTTAAACGCCTCACAAAAGCTCAGCTTGCAAAGCTAAACCATGCTCAGAGGAAGGCATATCTTGAGGAGCTGGATTACAGAGAGAAGTTATTCTACAAAAAACAGCTAAAGGAGGAAAGGATGCGCCGTAAAATAATGAAGAAAATGGCAGCAGAGGCCAGTGCAAGAACAGATGACTTCAGTAACAGCAATCTTGAAGATGATGGCAGTGCTCCAACAAATGTTGCAGTGCCTATGCCCGACATGGTATTGCCCTCATCGTTTGATTCTGACCATCCTAGCCATCGCTATCGTTTCGTGGACACACCAAGTGAATGGCTTGTCAGGCCAGTGCTGGAGACCCAGGGATGGGATCATGATGTTGGTTATGAAGGTCTAAATGTTGAAAGGTTGTTTGCTGTGAAAGGTAAAGTTCCTTTATCAGTGTCTGGTCAACTTTCAAAAGACAAGAAGGATTGCTCCCTCCAAATGGAGGTCGCAAGTTCACTTAAGCACGGTGAGGGGAAAACCACTTCACTGGGGCTTGATTTGCAGTCTGTTGGCAAGGACATGGCATACACTCTTCGTGGCGAGTCGAGGTTTAAAAACTTCAGGCGCAATAACACGGCTGCTGGGATATCCGCCACACTCCTTGGAGATTCTGTATCCGCTGGTGTGAAGGTTGAAGACAAGCTTGTTGTGAACAAGCAGCTCAGGGTTCTGGTTAGTGGAGGCGCTATGAGCGGGAGGGGAGATGTGGCTTACGGAGGGCGGCTTGAAGCAACATTGAAAGACAAAGATTACCCAATTGGCCGCATGCTTTCTACCATAGCGCTCTCTGTTGTTGATTGGCATGGGGATCTTGCTGTTGGCTGCAACATCCAGTCTCAGATTCCTGCTGGAAGAGCTAGCAATTTGATTGGTCATGCGAATCTAAGCAACAAGGGAACTGGTCAAGTTGGCATTCGCCTCAACAGCTCGGAGCATCTTGAGATCGCCCTTATTGCCCTCGTGCCAATATACCAAAACATCAAGAAGTTATTG-CAGAGTTAATCCGTATCAACCAGTATTTATGTAAGCGAGAAAAGGCAGCAAGATAAATCCATTAGAGTTAATGCAAGCATAAATTAGAACTAGAGTTAATGCAAGCATAAATTAGAACTATCTATTTATTTTCTTCTTCCCTTACCTACACGTAATAGTGTTTTCTTCCAAGTTTTTTTT--TTTTTGATGAAGTTGGATTTGCAGAACACATCCTTTTCAGGATTTTTGTTGTTATCCTTGTACTCTCAATAGCTGATAAGAAAAAAAAATGCACTGCTGTTTTGAAGGC-TGCAAAAAAAAAAAAAAAAANAANAAANGGGGGGGCCCCN] [+] EMBL AK072270 [GAGGCCTGATCACCACCCTCTCTCCTCCCCTTTCCCTGACCCCGCGACCGCGCCGCGCGAGGCGAACTCGCCACTCCGATCTCTCTCTCCGGCGACGCCGCCGCCGCCGCACAGGGTTTTGCTCTCTCTCGCGCGGAATGGAGAGCGGCGGGGTCGACGGCGAGAGGCCCCTGCTGCGCGAGGCGGGGGATTTGGGTGGCGAGGACGGCGGCGCAGGCGGAGTCCCCGAGGAGGGGGATGCGAAGGGCGATGTGATGGCGGCGGCGGCGGCGCAGGGGGGCGATGGCGATGAGGGTGTGGAGGCGGTAGATGGGGACGGGAGTAACGAGGAGGAGGAGGTTGTGCAGACGCCCGATGTGAAGCAGACGCCCGGCGCCGCGGCCGCGGCGGCCTGGCGGGAGGCGGCGTGGGAGGAGGCTGACGGCGAGGAGTTCGTGGATGTCTTGGAAGGGGACGTGGATGAGAAGCGTGAGGATGGATCGGCCTTGGAGAATGGGGAGGATTTGTTGGCCTCCCGTTCTCTCGCTGTCGAGGGTGACGAAGAAGGGTATGGTTCTTGTGCTGATATTGGTATAGAAGAAGACGCTGAGGGTGATGCGAGTCGGGAGCGCTTGGAGGAGGAAGCCATGACGGAATCAATCAGGGAGTATGTGACAGAAGCTGTTTTGGCTGACCATATCCAGGAGCAACCGGACAAATCGAAGAGTGAATCTGAACATGTGAAGGTTGCTCAGCACAAGTCGCAGATTGCGAAGAGCAGGGAAGAGGGACCCAAACAATCTGGAGGCGAACCGTCCGTTGTTGTCGAGGAATTGAATGGATCAAGCTCGTCTGATGATGAGAGTAAAGCTACCTCCGCTCCTCCTGCACGATCCATTAGTGGTGCTGCAGGTCGTTCTAATGGCCCCTCTTTGCCATCTCGTCCTGCTGGGCTTGGAGCATCGACTTCCTTGTCGCAGCCCTCAGCTCGACCTGTTCAGCAGACCCGCGCTAATGGTCCAGTCGCTGTGGACAGAGAAACTCGGCAGGATGTTGAATCTCCTGAGGATGGAGACGAAAATGATGAAATCCGTGAGAAACTCCAGATGATCCGGGTTAAGTTTCTGCGTCTTGCTAACAGGTTTGGGCAAACACCTAATAATATGGTGGTTTCTCAGGTTCTTTACCGACTTGGGCTGGCAGAACAGCTTAGAAGAAATACAGGCCAGGGTGTTTTTAGTTTTGACCGGGCACAAGATATGGCAGAACGTCTTGAAGCTGCTGGAAACGAGCCCCTTGATTTTTCTTGCACCATCTTGGTTCTTGGTAAAACTGGGGTTGGCAAGAGTGCTACCATCAATTCTATTTTTGATGATGTCCGGTTGGAAACAAATGCTTTTGATACCAGCACTAGAAAGGTTCAAGAAGTAGTTGGTGCAGTTGAGGGAATCAAAGTAAAAGTTATCGATACTCCTGGCCTGTCATGCTCATCTTCAGACCAGCACCACAACCAGAAGATTCTCAATTCTGTCAAGCGACTTATCAGCAGAAACCCTCCTGATATTGTTCTTTATTTTGATAGACTGGATATGCAGACCAGGGACTATGGTGATGTGCCTCTTCTGCAAACCATTACAAGAGTCTTTGGAGCATCAATCTGGTTCAATGCCATAGTTGTGCTAACTCATGCTGCATCTGCACCACCTGATGGTCTGAATGGAATTCCCCTGAGCTATGAGATGTTTGTAACCCAAAGGTCTCATGTAGTCCAGCAAGCTATAAGGCAAGCCGCTGGTGATGTCCGTCTTATGAATCCAGTGTCCCTGGTTGAAAACCACTCAGCGTGCAGGACCAATAGGGCAGGCCAGAGGGTGTTGCCAAATGGGCATGTCTGGAAACCACAGTTGCTATTGCTTTGTTTTGCCTCAAAGGTTTTAGCAGAGGCCAACGCGCTTCTCAAGCTGCAGGACAATCCTGCTGGTAAACCTCGTATGAGGATTCCTCCACTTCCTTTCCTATTGTCTTCGCTTCTTCAGTCTCGAGCCCCACTGAAGTTACCAGAGGAGCAGTTTGGTGATGATGATGATATTGAAGACGATTTGGCTGATGATTCGGATTCAGATGATGGTTCAGACTATGATGACTTGCCTCCTTTTAAACGCCTCACAAAAGCTCAGCTTGCAAAGCTAAACCATGCTCAGAGGAAGGCATATCTTGAGGAGCTGGATTACAGAGAGAAGTTATTCTACAAAAAACAGCTAAAGGAGGAAAGGATGCGCCGTAAAATAATGAAGAAAATGGCAGCAGAGGCCAGTGCAAGAACAGATGACTTCAGTAACAGCAATCTTGAAGATGATGGCAGTGCTCCAACAAATGTTGCAGTGCCTATGCCCGACATGGTATTGCCCTCATCGTTTGATTCTGACCATCCTAGCCATCGCTATCGTTTCGTGGACACACCAAGTGAATGGCTTGTCAGGCCAGTGCTGGAGACCCAGGGATGGGATCATGATGTTGGTTATGAAGGTCTAAATGTTGAAAGGTTGTTTGCTGTGAAAGGTAAAGTTCCTTTATCAGTGTCTGGTCAACTTTCAAAAGACAAGAAGGATTGCTCCCTCCAAATGGAGGTCGCAAGTTCACTTAAGCACGGTGAGGGGAAAACCACTTCACTGGGGCTTGATTTGCAGTCTGTTGGCAAGGACATGGCATACACTCTTCGTGGCGAGTCGAGGTTTAAAAACTTCAGGCGCAATAACACGGCTGCTGGGATATCCGCCACACTCCTTGGAGATTCTGTATCCGCTGGTGTGAAGGTTGAAGACAAGCTTGTTGTGAACAAGCAGCTCAGGGTTCTGGTTAGTGGAGGCGCTATGAGCGGGAGGGGAGATGTGGCTTACGGAGGGCGGCTTGAAGCAACATTGAAAGACAAAGATTACCCAATTGGCCGCATGCTTTCTACCATAGCGCTCTCTGTTGTTGATTGGCATGGGGATCTTGCTGTTGGCTGCAACATCCAGTCTCAGATTCCTGCTGGAAGAGCTAGCAATTTGATTGGTCATGCGAATCTAAGCAACAAGGGAACTGGTCAAGTTGGCATTCGCCTCAACAGCTCGGAGCATCTTGAGATCGCCCTTATTGCCCTCGTGCCAATATACCAAAACATCAAGAAGTTATTG CAGAGTTAATCCGTATCAACCAGTATTTATGTAAGCGAGAAAAGGCAGCAAGATAAATCCATTAGAGTTAATGCAAGCATAAATTAGAACTAGAGTTAATGCAAGCATAAATTAGAACTATCTATTTATTTTCTTCTTCCCTTACCTACACGTAATAGTGTTTTCTTCCAAGTTTTTTTT TTTTTGATGAAGTTGGATTTGCAGAACACATCCTTTTCAGGATTTTTGTTGTTATCCTTGTACTCTCAATAGCTGATAAGAAAAAAAAATGCACTGCTGTTTTGAAGGC T ] [-] EMBL CA759009 [ TTCCGTATACGCTGGTGTGAAGTTTGAAGACAAGCTTGTTGTGAGCAAGCAGTTCAGGGTTCTGGGTAGTGGAGGCCCTATGACCGGGAGGGGAGATGTGGCTTACGCAGGGCGGCTTGAAGCAACATTGGAAGACAAAGATTCCCCAATTGGCCGCATGCTTTCTACCATAGCGCTCTCTGTTGTTGATCGGCATGGGGATCTTGCTGTTGGCTGCAACATCCAGTCTCAGATTCCTGCTGGAAGAACTAGCAATTTGATTGGTCATGCGAATCTAAGCAACAAGGGAACTGGTCAAGTTGGCATTCGCCTCAACAGCTCGGAGCATCTTGAGATCGCCCTTATTGCCCTCGTGCCAATATACCAAAACATCAAGAAGTTATTG CAGAGTTAATCCGTATCAACCAGTATTTATGTAAGCGAGAAAAGGCAGCAAGATAAATCCATTAGAGTTAATGCAAGCATAAATTAGAACTAGAGTTAATGCAAGCATAAATTAGAACTATCTATTTATTTTCTTCTTCCCTTACCTACACGTAATAGTGTTTTCTTCCAAGTTTTTTTTTCTTTTTGATGAAGTTGGATTTGCAGAACACATCCTTTTCAGGATTTTTGTTGTTATCCTTGTACTCTCAATAGCTGATAAGAAAAAAAAATGCACTGCTGTTTTGAAGGC TGCAAAAAA ] [+] EMBL CA999420 [ GGGCGGCTTGAAGCAACATTGAAAGACAAAGATTACCCAATTGGCCGCATGCTTTCTACCATAGCGCTCTCTGTTGTTGATTGGCATGGGGATCTTGCTGTTGGCTGCAACATCCAGTCTCAGATTCCTGCTGGAAGAGCTAGCAATTTGATTGGTCATGCGAATCTAAGCAACAAGGGAACTGGTC ] [-] EMBL AU181096 [ TTGCTGTTGGCTGCAACATCCAGTCTCAGATTCCTGCTGGAAGAGCTAGCAATTTGATTGGTCATGCGAATCTAAGCAACAAGGGAACTGGTCAAGTT GCATTCGCCTCAACAGCTCGGAGCATCTTGAGANCGCCCTTATTGCCCTCGTGCCAATATACCAAAACATCAAGAAGTTATTG CAGAGTTAATCCGTATCAACCAGTATTTATGTAAGCGAGNAAAGGCAGCAAGATAAATCCATTAGAGTTAATGCAAGCATAAATTAGAACTAGAGTTAATGCAAGCATAAATTAGAACTATCTAaaaaa ] [+] EMBL C98152 [ TGAGANCGCCCTTATTGCCCTCGTGCCAATATNCCAAAACATCAAGAAGTTATTGCCAGAGTTAATCCGTATCAACCAGTATTTATGTAAGCGAGAAAAGGCAGCAAGATAAATCCATTAGAGTTAATGCAAGCATAAATTAGAACTAGAGTTAATGCAAGCATAAATTAGNNCTATCTATTTATTTTCTTNTTCCCTTACCTACACGTAATAGTGTTTTCTTCCAAGTTTTTTTT TTTTTGATGAAGTTGGATTTGNAGAACACATCCTTTTNAGGATTTTTGTTGTTATCCTTGTACTCTCAATAGCTGATAAGAAAAAAAAATGCACTGCTGTTTTGAAGGC TGCAAAAAAAAAAAAAAA ] [+] EMBL OSC08092A [ GAGATCGCCCTTATTGCCCTCGTGCCAATATACCAAAACATCAAGAAGTTATTG CAGAGTTAATCCGTATCAACCAGTATTTATGTAAGCGAGAAAAGGCAGCAAGATAAATCCATTAGAGTTAATGCAAGCATAAATTAGAACTAGAGTTAATGCAAGCATAAATTAGAACTATCTATTTATTTTCTTCTTCCCTTACCTACACGTAATAGTGTTTTCTTCCAAGTTTTTTTT TTTTTGANGAAGTTGGNTTTGCAGAACACAACCTTTTCAGGATTTTNGTNGTTATCCTTGGACNCTCAATAGCTGATAAGAAAAAAAAATGCACNGCNGTTTTGAAGGCTTGCAAAAAAAANAAAANAAANAANAAANGGGGGGGCCCCN] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||