These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9686#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 4202 fasta sequence [TCCACCGAACTCTTCCACTCCTCCGCATCTCGCGATCTCTTCCCCCCCCCCCCCCCCGCGCGCCGCCTCTCTCCGGCGAACCCCTCACCGGCGGCGGCGGCGGGGCGAGTGGGACGCCGCATGGAGCAGTAGGGGACGGAGCGGAGGCTGCGTGAGGTGAAGGGCGGGCGCGGTGGCGATGGCGAACTACCTCGCGCAGTTCCAGACCATCAAGTCCTCCTGCGACCGCATCGTCGTCGCCGTTGAAGATGTGAGTGACTTGTGGCTCAATGTGAAAGAAAGTTTCGAGCAACGCTTACCAGTGAAGAAGGCCTGCCTCAATAACAAGGCGAGGAATCCTGTTTTTGTGGAAAACCTACCAGCTGAGTTTATACAGACCACTGATTCGAGGCTACGTAGTCGATTTCCACAAGATCAATACTTGTTTTGGTTCCGGGAACCATATGCAACTGTTGTTCTTGTCAGTTGCGAGGATCTTGATGAGTTCAAGACCATTCTTAAGCCTCGCCTCAAATTGATTGTGCAAAATGATGAGAGGGAATGGTTCATTGTATTTGTGTCTAAGGCCCATCCTAGCAATGACCAAGCATCTAAGATGGCAAAGAGAGTATATGCTAGGCTTGAGAGCGATTTCAACACTAAAAAAAGAGAAAGATGCTGTAAATTTGATCTCCATGGACCTGATGCGGAATTCTGGGATGATTTTGACTCCAAAATGGTGGACTGCATTAGAAACACATTGGATAGGCGGGTTCAATTTTATGAAGAGGAAATTCGCAGGTTAAGTGAGCAGAGATTCACTCCGATATGGAACTTCTGCAACTTTTTTATTCTTAAGGAAAGCTTGGCTTTCATGTTTGAGATGACTAATCTTCATGAAGATTCACTCCGTGAATACGACGAGCTTGAACTATGCTACTCAGAATCAGTTAATTCTCCTGGAAAACATCGAGAATTTGGAGGATTGGATACTGGTGATGATCAAGCGGCGCTGCTAAATCCAGGATTTAAAGCATTGACCCAAATTGTCCAGGATGATGTGTTCAGAGAATTTGAGTTTAGACAATACATATTTGCTTGCCAGGCTAAGTTATTGTTTAAATTGCATCGCCCAATTGAGGTTGCTGCAAGAGGATATGCTTTTGTGGTTAGCTTTTCCAAGACGCTAGCCTTGCAGGAGAATGGTCTACCATTTTGTTTTCGTGAAGTATGGGTGATAACTGCATGTATGGATTTAATAAAAGCAACAACCTCACACTATGATGGTACAGCTGTTGCTATCGACTCAGAGAGGGAGTTCTGTCGTATTCAGGGTGACCTCTATTCTCTGTGCCGTATTAAGTTTCTGAGGCTTGCTTATTTGATTGGTTATGGAGTTGAGATAGAAAAAAGTCCAGTCAACAGTGCATCTTTAAGCATGCTACCATGGCCAAAGCCAGCTACATGGCCTTCTATTCCACCGGATTCATCAGCAGAAACAATGGCAAAGGAGAAGATGATTCTCCAAGCAAAATCAAGAGAAAAGATCTTCAATATTCACAGGAAACCACTGCCATTAGAACCTTCTTTGCTTCTTCGTGAGGCTAATAGGCGTAGGGCTTTTCTTTCTGTTGGAAATATATCTGAATTATATGATTCAGGTGATGGTTCAGGTCTGGATGCAAATTCAAAACCTTCGCCCAACAAATCTGCTTCGAACTACATGGCCAGGACAATGTCAGGGCCAGCGACATCTGAGACTTCTCTGCCAGTTGATCGCCCCATGAGGTTGTCAGAAATTCATGTTGCAGCTGAGCATGCACTGAAGCAGACAGTATCTGACCCTAATTTTATGACATCACTTTCATCACTAGAAGAATTTGAGAAAAGATATATGGAGCTTACTAAAGGCGCAGCTGACAATTATCATCACTCTTGGTGGAAAAGACATGGAGTTGTGCTAGATGGAGAAATTGCAGCTCTATTCTTTAAGCATGAAAATTATGATTTGGCTGCAAAGTCCTATGAGAAAGTTTGTGCTCTCTATTCTGCAGAAGGCTGGGAAGAGCTGTTGGCAGATGTTCTTCCTGATCTTGCAGAATGCCAGAAGATTCTCAATGATGAAGCTGGTTATTTGACTTCCTGTGTGAAGTTACTTTCTCTAGAGAGTGGCTTATTTTCATCTAAAGAGCGGCAAGCTTTCCAGTCAGAGGTTGTTCGGCTTGCTCACAGTGAAATGAAGCATCCTGTGCCCCTTGATGTCTCATCACTTATTACATTTGCTGGAAATCCTGCTCCACCACTAGAGTTGTGTGATGGAGATCCTGGTACACTATCTGTAGCTGTTTGGAGTGCCTTCCCGGATGACATCACACTCGAGTCTCTCAGCTTAAGATTGTCGGCTTCCTCTAGTGCAGATGAAGGTCTTAAGGCGATAAAGAGTTCAGATGCTCGAGTTCTTGTACCCGGTAGAAATATCATCACCTTCGACATTCCTCCTCAAAAGCCTGGATCCTATGTGTTGGGTGCTCTGACGGGCCAGATTGGCAAGCTATCATTCAGATCGCATGGATTTTCTCAAGATGGTCCAGTGGACACTGATGAATTCATGAGCTTTGAGAAGCCAACAAGGCCTGTTTTGAAGGTGAGAAAACCAAGGGCTTTAGTTGATATTACTCCTGCTGTGTCCTCTGCATTGCTTATGAATGAACTTCAGTGGATTGGGTTAATTGTCAAGCCAATAGACTATTCTTTGAAAGATGGCATATTGCATATAGATGCGGGTGCTGGACTGAAAATTGAGGAGTCCCAGATGATTGAGATAGAAACTTATGGAAGTGATGTGGAGCATGTTGGTGGTACTGATGCTTCCAAGACATCATCAAGCTCCACTGATACTCGTAAGGTTGAGAAGGTCCCTATTGAAGATGGGAAGATAAAAATACCAGACTGGGCTAGTGATGTGACTACTCTTGTATGGTTTCCTGTTCGTGCTATTGATGATACAATTGCAAGGGGTGCATCGCCAGCATCCCCTCAGAAACAGAGCATAGTAGATGGGATGAGAATGATTGCTCTCAAGCTTGAATTTGGAGTTTTTCTTAATCAAGTGTTTGAAAGGACTATCGCAGTACATTTCACTAACCCATTCCATGTGAGCACACGCGTAGTAGATAAGTGCTATGATGGAACTCTACTACTGCAGGTGATATTGCATTCTGAAGTGAAGGCCACTCTGCATGTAAAGGATATATGGTTGGATCTGCAATCTGGATTTGAACACACAGGAAAGGGAGATGGACGACCAACTTCGAACTTGTTCCCTCTGGTTATTGCTCCTTCTTCGAGAGCTGGAATCTTATTTGTAATACGTTTAAGTGCCTTAGGAGATATGGATGAGCTAGAAAAGGCAGATAGCATGTTGAATATTAAGTATGGAATATCCGGTGACAGAACAACTGGAGCACACTCTCCAGTTCCTGTTAAACCTGATGATTCTGAGGAGCTTGTATTCAAGATTGCGGTGAAGATGAAGCGCCCTGTCCTGGACCCATGTGTGGCAGTTGGGTTCCTTCCGTTTTCTTCGGACTGCTTGAGGGTTGGCCAGCTGGTCAACATGAGATGGAGGGTTGAAAGGCTGAAGAACCCGGAGGATGCCTCTCTGTTAGCCGACGAAATACTTTATCAAGTCGACGCCAACCCACAGAACTGGATGGTTGCTGGGAGGAAATGCGGTCACGTATCGCTGTCAAACAAACAAGGTTCAAGGATAGAGATCACGGTGACGTGCGTGCCGCTGGTGTCCGGC-TACGTCCAT-CCGCCGCAGCTGGGCCTG-CCGCACGTCGGCGAGGCCAACATCAGCTGCAACCCGGCAGGCCCTCACCTGGTGT-GCGTCCTTCCTCCGACACTGAGCACCTCATACTGCATACCGGCTTGAT-CCATCCATCATACACAGATTGTATGTTAGGCTTGTAGCCTGTAGTAGAAGAGAAATGCCACTTACACTGGTCGGCTTGAGATGTATCGCCATTTGCACCGGATGAGATGTATGCTGTTTTTGCCGAGACATTCTTTT-GTGC--AGATGAGTTCTTTTTCGTCAGTAACATTCAGAACGTGTTCCATTGTTTCATGTACCATAAGATAAGTAACATAATTCTCCGTGTATATCAAATCAAGTGATAGACTGGATTTTGAAGTCTACCAGAATTCCGGCACAAGAGTTA] [+] EMBL AK072345 [TCCACCGAACTCTTCCACTCCTCCGCATCTCGCGATCTCTTCCCCCCCCCCCCCCCCGCGCGCCGCCTCTCTCCGGCGAACCCCTCACCGGCGGCGGCGGCGGGGCGAGTGGGACGCCGCATGGAGCAGTAGGGGACGGAGCGGAGGCTGCGTGAGGTGAAGGGCGGGCGCGGTGGCGATGGCGAACTACCTCGCGCAGTTCCAGACCATCAAGTCCTCCTGCGACCGCATCGTCGTCGCCGTTGAAGATGTGAGTGACTTGTGGCTCAATGTGAAAGAAAGTTTCGAGCAACGCTTACCAGTGAAGAAGGCCTGCCTCAATAACAAGGCGAGGAATCCTGTTTTTGTGGAAAACCTACCAGCTGAGTTTATACAGACCACTGATTCGAGGCTACGTAGTCGATTTCCACAAGATCAATACTTGTTTTGGTTCCGGGAACCATATGCAACTGTTGTTCTTGTCAGTTGCGAGGATCTTGATGAGTTCAAGACCATTCTTAAGCCTCGCCTCAAATTGATTGTGCAAAATGATGAGAGGGAATGGTTCATTGTATTTGTGTCTAAGGCCCATCCTAGCAATGACCAAGCATCTAAGATGGCAAAGAGAGTATATGCTAGGCTTGAGAGCGATTTCAACACTAAAAAAAGAGAAAGATGCTGTAAATTTGATCTCCATGGACCTGATGCGGAATTCTGGGATGATTTTGACTCCAAAATGGTGGACTGCATTAGAAACACATTGGATAGGCGGGTTCAATTTTATGAAGAGGAAATTCGCAGGTTAAGTGAGCAGAGATTCACTCCGATATGGAACTTCTGCAACTTTTTTATTCTTAAGGAAAGCTTGGCTTTCATGTTTGAGATGACTAATCTTCATGAAGATTCACTCCGTGAATACGACGAGCTTGAACTATGCTACTCAGAATCAGTTAATTCTCCTGGAAAACATCGAGAATTTGGAGGATTGGATACTGGTGATGATCAAGCGGCGCTGCTAAATCCAGGATTTAAAGCATTGACCCAAATTGTCCAGGATGATGTGTTCAGAGAATTTGAGTTTAGACAATACATATTTGCTTGCCAGGCTAAGTTATTGTTTAAATTGCATCGCCCAATTGAGGTTGCTGCAAGAGGATATGCTTTTGTGGTTAGCTTTTCCAAGACGCTAGCCTTGCAGGAGAATGGTCTACCATTTTGTTTTCGTGAAGTATGGGTGATAACTGCATGTATGGATTTAATAAAAGCAACAACCTCACACTATGATGGTACAGCTGTTGCTATCGACTCAGAGAGGGAGTTCTGTCGTATTCAGGGTGACCTCTATTCTCTGTGCCGTATTAAGTTTCTGAGGCTTGCTTATTTGATTGGTTATGGAGTTGAGATAGAAAAAAGTCCAGTCAACAGTGCATCTTTAAGCATGCTACCATGGCCAAAGCCAGCTACATGGCCTTCTATTCCACCGGATTCATCAGCAGAAACAATGGCAAAGGAGAAGATGATTCTCCAAGCAAAATCAAGAGAAAAGATCTTCAATATTCACAGGAAACCACTGCCATTAGAACCTTCTTTGCTTCTTCGTGAGGCTAATAGGCGTAGGGCTTTTCTTTCTGTTGGAAATATATCTGAATTATATGATTCAGGTGATGGTTCAGGTCTGGATGCAAATTCAAAACCTTCGCCCAACAAATCTGCTTCGAACTACATGGCCAGGACAATGTCAGGGCCAGCGACATCTGAGACTTCTCTGCCAGTTGATCGCCCCATGAGGTTGTCAGAAATTCATGTTGCAGCTGAGCATGCACTGAAGCAGACAGTATCTGACCCTAATTTTATGACATCACTTTCATCACTAGAAGAATTTGAGAAAAGATATATGGAGCTTACTAAAGGCGCAGCTGACAATTATCATCACTCTTGGTGGAAAAGACATGGAGTTGTGCTAGATGGAGAAATTGCAGCTCTATTCTTTAAGCATGAAAATTATGATTTGGCTGCAAAGTCCTATGAGAAAGTTTGTGCTCTCTATTCTGCAGAAGGCTGGGAAGAGCTGTTGGCAGATGTTCTTCCTGATCTTGCAGAATGCCAGAAGATTCTCAATGATGAAGCTGGTTATTTGACTTCCTGTGTGAAGTTACTTTCTCTAGAGAGTGGCTTATTTTCATCTAAAGAGCGGCAAGCTTTCCAGTCAGAGGTTGTTCGGCTTGCTCACAGTGAAATGAAGCATCCTGTGCCCCTTGATGTCTCATCACTTATTACATTTGCTGGAAATCCTGCTCCACCACTAGAGTTGTGTGATGGAGATCCTGGTACACTATCTGTAGCTGTTTGGAGTGCCTTCCCGGATGACATCACACTCGAGTCTCTCAGCTTAAGATTGTCGGCTTCCTCTAGTGCAGATGAAGGTCTTAAGGCGATAAAGAGTTCAGATGCTCGAGTTCTTGTACCCGGTAGAAATATCATCACCTTCGACATTCCTCCTCAAAAGCCTGGATCCTATGTGTTGGGTGCTCTGACGGGCCAGATTGGCAAGCTATCATTCAGATCGCATGGATTTTCTCAAGATGGTCCAGTGGACACTGATGAATTCATGAGCTTTGAGAAGCCAACAAGGCCTGTTTTGAAGGTGAGAAAACCAAGGGCTTTAGTTGATATTACTCCTGCTGTGTCCTCTGCATTGCTTATGAATGAACTTCAGTGGATTGGGTTAATTGTCAAGCCAATAGACTATTCTTTGAAAGATGGCATATTGCATATAGATGCGGGTGCTGGACTGAAAATTGAGGAGTCCCAGATGATTGAGATAGAAACTTATGGAAGTGATGTGGAGCATGTTGGTGGTACTGATGCTTCCAAGACATCATCAAGCTCCACTGATACTCGTAAGGTTGAGAAGGTCCCTATTGAAGATGGGAAGATAAAAATACCAGACTGGGCTAGTGATGTGACTACTCTTGTATGGTTTCCTGTTCGTGCTATTGATGATACAATTGCAAGGGGTGCATCGCCAGCATCCCCTCAGAAACAGAGCATAGTAGATGGGATGAGAATGATTGCTCTCAAGCTTGAATTTGGAGTTTTTCTTAATCAAGTGTTTGAAAGGACTATCGCAGTACATTTCACTAACCCATTCCATGTGAGCACACGCGTAGTAGATAAGTGCTATGATGGAACTCTACTACTGCAGGTGATATTGCATTCTGAAGTGAAGGCCACTCTGCATGTAAAGGATATATGGTTGGATCTGCAATCTGGATTTGAACACACAGGAAAGGGAGATGGACGACCAACTTCGAACTTGTTCCCTCTGGTTATTGCTCCTTCTTCGAGAGCTGGAATCTTATTTGTAATACGTTTAAGTGCCTTAGGAGATATGGATGAGCTAGAAAAGGCAGATAGCATGTTGAATATTAAGTATGGAATATCCGGTGACAGAACAACTGGAGCACACTCTCCAGTTCCTGTTAAACCTGATGATTCTGAGGAGCTTGTATTCAAGATTGCGGTGAAGATGAAGCGCCCTGTCCTGGACCCATGTGTGGCAGTTGGGTTCCTTCCGTTTTCTTCGGACTGCTTGAGGGTTGGCCAGCTGGTCAACATGAGATGGAGGGTTGAAAGGCTGAAGAACCCGGAGGATGCCTCTCTGTTAGCCGACGAAATACTTTATCAAGTCGACGCCAACCCACAGAACTGGATGGTTGCTGGGAGGAAATGCGGTCACGTATCGCTGTCAAACAAACAAGGTTCAAGGATAGAGATCACGGTGACGTGCGTGCCGCTGGTGTCCGGC TACGTCCAT CCGCCGCAGCTGGGCCTG CCGCACGTCGGCGAGGCCAACATCAGCTGCAACCCGGCAGGCCCTCACCTGGTGT GCGTCCTTCCTCCGACACTGAGCACCTCATACTGCATACCGGCTTGAT CCATCCATCATACACAGATTGTATGTTAGGCTTGTAGCCTGTAGTAGAAGAGAAATGCCACTTACACTGGTCGGCTTGAGATGTATCGCCATTTGCACCGGATGAGATGTATGCTGTTTTTGCCGAGACATTCTTTT GTGC AGATGAGTTCTTTTTCGTCAGTAACATTCAGAACGTGTTCCATTGTTTCATGTACCATAAGATAAGTAACATAATTCTCCGTGTATATCAAATCAAGTGATAGACTGGAT ] [+] EMBL AK104059 [ CTTTGAAAGATGGCATATTGCATATAGATGCGGGTGCTGGACTGAAAATTGAGGAGTCCCAGATGATTGAGATAGAAACTTATGGAAGTGATGTGGAGCATGTTGGTGGTACTGATGCTTCCAAGACATCATCAAGCTCCACTGATACTCGTAAGGTTGAGAAGGTCCCTATTGAAGATGGGAAGATAAAAATACCAGACTGGGCTAGTGATGTGACTACTCTTGTATGGTTTCCTGTTCGTGCTATTGATGATACAATTGCAAGGGGTGCATCGCCAGCATCCCCTCAGAAACAGAGCATAGTAGATGGGATGAGAATGATTGCTCTCAAGCTTGAATTTGGAGTTTTTCTTAATCAAGTGTTTGAAAGGACTATCGCAGTACATTTCACTAACCCATTCCATGTGAGCACACGCGTAGTAGATAAGTGCTATGATGGAACTCTACTACTGCAGGTGATATTGCATTCTGAAGTGAAGGCCACTCTGCATGTAAAGGATATATGGTTGGATCTGCAATCTGGATTTGAACACACAGGAAAGGGAGATGGACGACCAACTTCGAACTTGTTCCCTCTGGTTATTGCTCCTTCTTCGAGAGCTGGAATCTTATTTGTAATACGTTTAAGTGCCTTAGGAGATATGGATGAGCTAGAAAAGGCAGATAGCATGTTGAATATTAAGTATGGAATATCCGGTGACAGAACAACTGGAGCACACTCTCCAGTTCCTGTTAAACCTGATGATTCTGAGGAGCTTGTATTCAAGATTGCGGTGAAGATGAAGCGCCCTGTCCTGGACCCATGTGTGGCAGTTGGGTTCCTTCCGTTTTCTTCGGACTGCTTGAGGGTTGGCCAGCTGGTCAACATGAGATGGAGGGTTGAAAGGCTGAAGAACCCGGAGGATGCCTCTCTGTTAGCCGACGAAATACTTTATCAAGTCGACGCCAACCCACAGAACTGGATGGTTGCTGGGAGGAAATGCGGTCACGTATCGCTGTCAAACAAACAAGGTTCAAGGATAGAGATCACGGTGACGTGCGTGCCGCTGGTGTCCGGC TACGTCCAT CCGCCGCAGCTGGGCCTG CCGCACGTCGGCGAGGCCAACATCAGCTGCAACCCGGCAGGCCCTCACCTGGTGT GCGTCCTTCCTCCGACACTGAGCACCTCATACTGCATACCGGCTTGAT CCATCCATCATACACAGATTGTATGTTAGGCTTGTAGCCTGTAGTAGAAGAGAAATGCCACTTACACTGGTCGGCTTGAGATGTATCGCCATTTGCACCGGATGAGATGTATGCTGTTTTTGCCGAGACATTCTTTT GTGC AGATGAGTTCTTTTTCGTCAGTAACATTCAGAACGTGTTCCATTGTTTCATGTACCATAAGATAAGTAACATAATTCTCCGTGTATATCAAATCAAGTGATAGACTGGATTTTGAAGTCTACCAGAATTCCGGCACAAGAGTTA] [+] EMBL OSR25451A [ AGATGCGGGTGCTGGACTGAAAATTGAGGAGTCCCAGATGATTGAGATAGAAACTTATGGAAGTGATGTGGAGCATGTTGGTGGTACTGATGCTTCCAAGACATCATCAAGCTCCACTGATACTCGTAAGGTTGAGAAGGTCCCTATTGAAGATGGGAAGATAAAAATACCAGACTGGGCTAGTGATGTGACTACTCTTGTATGGTTTCCTGTTCGTGCTATTGATGATACAATTGCAAGGGGTGCATCGCCAGCATCCCCTCAGAAACAGAGCATAGTAGATGGGATGAGAATGATTGCTCTCAAGCTTGAATTTGGAGTTTTTCTTAATCAAGTGTTTGAAAGGNCTATCGCAGTACATTTCACTAACCCATTCCATG ] [+] EMBL BE041111 [ ATATATGGTTGGATCTGCAATCTGGATTTGAACACACAGGAAAGGGAGATGGGCGACCAACTTCGAACTTGTTCCCTCTGGTTATTGCTCCTTCTTCGAGAGCTGGAATCTTATTTGTAATACGTTTAAGTGCCTTAGGAGATATGGATGAGCTAGAAAAGGCAGATAGCATGTTGAATATTAAGTATGGAATATCCGGTGACAGAACAACTGGAGCACACTCTCCAGTTCCTGTTAAACCTGATGATTCTGAGGAGCTTGTATTCAAGATTGCGGTGAAGATGAAGCGCCCTGTCCTGGACCCATGTGTGGCAGTTGGGTTCCTTCCGTTTTCTTCGGACTGCTTGAGGGTTGGCCAGCTGGTCAACATGAGATGGAGGGTTGAAAGGCTGAAGAACCCGGAGGATACCTCTCTGTTAGCCGACGAAATACTTTATCAAGTCGACGCCAACCCACAGAACTGGATGGTTGCTGGGAGGAAATGCGGTCACGTATCGCTGTCAAACAAACAAGGTTCAAGGATAGAGATCACGGTGACGTGCGTGCCGCTGGTGTCCGGCTTAC TCCATCCCGCCG AGCTTTGCCTG CCGAACGTTTGCGAGGTCAACATCATTTGAAACCCGGCAGGTCCTTACCTGGGGTGGCG CCCTCATTCGACACTGAGCACCTTATAC ] [+] EMBL CA755587 [ GTTGGATCTGCAATCTGGATTTGAACACACAGGAAAGGGAGATGGGCGACCAACTTCGAACTTGTTCCCTCTGGTTATTGCTCCTTCTTCGAGAGCTGGAATCTTATTTGTAATACGTTTAAGTGCCTTAGGAGATATGGATGAGCTAGAAAAGGCAGATAGCATGTTGAATATTAAGTATGGAATATCCGGTGACAGAACAACTGGAGCACACTCTCCAGTTCCTGTTAAACCTGATGATTCTGAGGAGCTTGTATTCAAGATTGCGGTGAAGATGAAGCGCCCTGTCCTGGACCCATGTGTGGCAGTTGGGTTCCTTCCGTTTTCTTCGGACTGCTTGAGGGTTGGCCAGCTGGTCAACATGAGATGGAGGGTTGAAAGGCTGAAGAACCCGGAGGATGCCTCTCTGTTAGCCGACGAAATACTTTATCAAGTCGACGCCAACCCACAGAACTGGATGGTTGCTGGGAGGAAATGCGGTCACGTATCGCTGTCAAACAAACAAGGTTCAAGGATAGAGATCACGGTGACGTGCGTGCCGCTGGTGTCCGGC TACGTCCAT CCGCCGCAGCTGGGCCTGCCCGCACGTC GCGAGGCC ACATCATTTGAAACCCGGCAGGCCCTCACCTGGGGTGGCG CCCTCATTCGACACTGAGCACCTCATACTGCATACCGGGCTGATCCCAT CTTCAAAC CAGATTGTAGGTTAGGCTTGTACNCCGTAATANAAAAAAATTGCCAC TACCCTGGTCGGCTTGAGA GTATCCCCCTTGGCCCCGAAGAAAATGT TGCTGTTTTTGCCAAAAATTTTTTTTGGGGCAAAAAAAATTTCTTTTTgcaaaa ] consensusID : consensus_9686#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 816 fasta sequence [GAGCTAGAAAAGGCAGATAGCATGTTGAATATTAAGTATGGAATATCCGGTGACAGAACAACTGGAGCACACTCTCCAGTTCCTGTTAAACCTGATGATTCTGAGGAGCTTGTATTCAAGATTGCGGTGAAGATGAAGCGCCCTGTCCTGGACCCATGTGTGGCAGTTGGGTTCCTTCCGTTTTCTTCGGACTGCTTGAGGGTTGGCCAGCTGGTCAACATGAGATGGAGGGTTGAAAGGCTGAAGAACCCGGAGGATGCCTCTCTGTTAGCCGACGAAATACTTTATCAAGTCGACGCCAACCCACAGAACTGGATGGTTGTTGGGAGGAAATGCGGTCACGTATCGCTGTCAAACAAACAAGGTTCAAGGATAGAGATCACGGTGACGTGCGTGCCGCTGGTGTCCGGCTACGTCCATCCGCCGCAGATGGGCCTGCCGCACGTCGGAGAGGCCAACATCAGCTGCAACCCGGCAGGCCCTCACCTGGTGTGCGTCCTTCCTCTGACACTGAGCACCTCATACTGCATACCGGCTGGATCCATCCATCATACCCAGATTGTATGTTAGGCTTGTAGCCTGTAGTAGAAGAGAAATGCCACTTACACTGGTCGGCTTGAGATGTATCGCTCATTTGCACCGTGATGATGATGTATGCTGTTTTTGCCGAGACATTCTTTTGTGCAGATGAGTTCTTTTTCGTCAGTAACATTCAGACCGTGTTCCATTGTTTCATGTCCCATAAGATAAGTAACATAATTCTCCGTGAAGGTCAAATCAAGTGATAGCCTGGATTTTGAAGTCTCTTAAAAGGGA] [-] EMBL CB665323 [GAGCTAGAAAAGGCAGATAGCATGTTGAATATTAAGTATGGAATATCCGGTGACAGAACAACTGGAGCACACTCTCCAGTTCCTGTTAAACCTGATGATTCTGAGGAGCTTGTATTCAAGATTGCGGTGAAGATGAAGCGCCCTGTCCTGGACCCATGTGTGGCAGTTGGGTTCCTTCCGTTTTCTTCGGACTGCTTGAGGGTTGGCCAGCTGGTCAACATGAGATGGAGGGTTGAAAGGCTGAAGAACCCGGAGGATGCCTCTCTGTTAGCCGACGAAATACTTTATCAAGTCGACGCCAACCCACAGAACTGGATGGTTGTTGGGAGGAAATGCGGTCACGTATCGCTGTCAAACAAACAAGGTTCAAGGATAGAGATCACGGTGACGTGCGTGCCGCTGGTGTCCGGCTACGTCCATCCGCCGCAGATGGGCCTGCCGCACGTCGGAGAGGCCAACATCAGCTGCAACCCGGCAGGCCCTCACCTGGTGTGCGTCCTTCCTCTGACACTGAGCACCTCATACTGCATACCGGCTGGATCCATCCATCATACCCAGATTGTATGTTAGGCTTGTAGCCTGTAGTAGAAGAGAAATGCCACTTACACTGGTCGGCTTGAGATGTATCGCTCATTTGCACCGTGATGATGATGTATGCTGTTTTTGCCGAGACATTCTTTTGTGCAGATGAGTTCTTTTTCGTCAGTAACATTCAGACCGTGTTCCATTGTTTCATGTCCCATAAGATAAGTAACATAATTCTCCGTGAAGGTCAAATCAAGTGATAGCCTGGATTTTGAAGTCTCTTAAAAGGGA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9686#0 TCCACCGAACTCTTCCACTCCTCCGCATCTCGCGATCTCTTCCCCCCCCCCCCCCCCGCG 60 consensus_9686#1 ------------------------------------------------------------ consensus_9686#0 CGCCGCCTCTCTCCGGCGAACCCCTCACCGGCGGCGGCGGCGGGGCGAGTGGGACGCCGC 120 consensus_9686#1 ------------------------------------------------------------ consensus_9686#0 ATGGAGCAGTAGGGGACGGAGCGGAGGCTGCGTGAGGTGAAGGGCGGGCGCGGTGGCGAT 180 consensus_9686#1 ------------------------------------------------------------ consensus_9686#0 GGCGAACTACCTCGCGCAGTTCCAGACCATCAAGTCCTCCTGCGACCGCATCGTCGTCGC 240 consensus_9686#1 ------------------------------------------------------------ consensus_9686#0 CGTTGAAGATGTGAGTGACTTGTGGCTCAATGTGAAAGAAAGTTTCGAGCAACGCTTACC 300 consensus_9686#1 ------------------------------------------------------------ consensus_9686#0 AGTGAAGAAGGCCTGCCTCAATAACAAGGCGAGGAATCCTGTTTTTGTGGAAAACCTACC 360 consensus_9686#1 ------------------------------------------------------------ consensus_9686#0 AGCTGAGTTTATACAGACCACTGATTCGAGGCTACGTAGTCGATTTCCACAAGATCAATA 420 consensus_9686#1 ------------------------------------------------------------ consensus_9686#0 CTTGTTTTGGTTCCGGGAACCATATGCAACTGTTGTTCTTGTCAGTTGCGAGGATCTTGA 480 consensus_9686#1 ------------------------------------------------------------ consensus_9686#0 TGAGTTCAAGACCATTCTTAAGCCTCGCCTCAAATTGATTGTGCAAAATGATGAGAGGGA 540 consensus_9686#1 ------------------------------------------------------------ consensus_9686#0 ATGGTTCATTGTATTTGTGTCTAAGGCCCATCCTAGCAATGACCAAGCATCTAAGATGGC 600 consensus_9686#1 ------------------------------------------------------------ consensus_9686#0 AAAGAGAGTATATGCTAGGCTTGAGAGCGATTTCAACACTAAAAAAAGAGAAAGATGCTG 660 consensus_9686#1 ------------------------------------------------------------ consensus_9686#0 TAAATTTGATCTCCATGGACCTGATGCGGAATTCTGGGATGATTTTGACTCCAAAATGGT 720 consensus_9686#1 ------------------------------------------------------------ consensus_9686#0 GGACTGCATTAGAAACACATTGGATAGGCGGGTTCAATTTTATGAAGAGGAAATTCGCAG 780 consensus_9686#1 ------------------------------------------------------------ consensus_9686#0 GTTAAGTGAGCAGAGATTCACTCCGATATGGAACTTCTGCAACTTTTTTATTCTTAAGGA 840 consensus_9686#1 ------------------------------------------------------------ consensus_9686#0 AAGCTTGGCTTTCATGTTTGAGATGACTAATCTTCATGAAGATTCACTCCGTGAATACGA 900 consensus_9686#1 ------------------------------------------------------------ consensus_9686#0 CGAGCTTGAACTATGCTACTCAGAATCAGTTAATTCTCCTGGAAAACATCGAGAATTTGG 960 consensus_9686#1 ------------------------------------------------------------ consensus_9686#0 AGGATTGGATACTGGTGATGATCAAGCGGCGCTGCTAAATCCAGGATTTAAAGCATTGAC 1020 consensus_9686#1 ------------------------------------------------------------ consensus_9686#0 CCAAATTGTCCAGGATGATGTGTTCAGAGAATTTGAGTTTAGACAATACATATTTGCTTG 1080 consensus_9686#1 ------------------------------------------------------------ consensus_9686#0 CCAGGCTAAGTTATTGTTTAAATTGCATCGCCCAATTGAGGTTGCTGCAAGAGGATATGC 1140 consensus_9686#1 ------------------------------------------------------------ consensus_9686#0 TTTTGTGGTTAGCTTTTCCAAGACGCTAGCCTTGCAGGAGAATGGTCTACCATTTTGTTT 1200 consensus_9686#1 ------------------------------------------------------------ consensus_9686#0 TCGTGAAGTATGGGTGATAACTGCATGTATGGATTTAATAAAAGCAACAACCTCACACTA 1260 consensus_9686#1 ------------------------------------------------------------ consensus_9686#0 TGATGGTACAGCTGTTGCTATCGACTCAGAGAGGGAGTTCTGTCGTATTCAGGGTGACCT 1320 consensus_9686#1 ------------------------------------------------------------ consensus_9686#0 CTATTCTCTGTGCCGTATTAAGTTTCTGAGGCTTGCTTATTTGATTGGTTATGGAGTTGA 1380 consensus_9686#1 ------------------------------------------------------------ consensus_9686#0 GATAGAAAAAAGTCCAGTCAACAGTGCATCTTTAAGCATGCTACCATGGCCAAAGCCAGC 1440 consensus_9686#1 ------------------------------------------------------------ consensus_9686#0 TACATGGCCTTCTATTCCACCGGATTCATCAGCAGAAACAATGGCAAAGGAGAAGATGAT 1500 consensus_9686#1 ------------------------------------------------------------ consensus_9686#0 TCTCCAAGCAAAATCAAGAGAAAAGATCTTCAATATTCACAGGAAACCACTGCCATTAGA 1560 consensus_9686#1 ------------------------------------------------------------ consensus_9686#0 ACCTTCTTTGCTTCTTCGTGAGGCTAATAGGCGTAGGGCTTTTCTTTCTGTTGGAAATAT 1620 consensus_9686#1 ------------------------------------------------------------ consensus_9686#0 ATCTGAATTATATGATTCAGGTGATGGTTCAGGTCTGGATGCAAATTCAAAACCTTCGCC 1680 consensus_9686#1 ------------------------------------------------------------ consensus_9686#0 CAACAAATCTGCTTCGAACTACATGGCCAGGACAATGTCAGGGCCAGCGACATCTGAGAC 1740 consensus_9686#1 ------------------------------------------------------------ consensus_9686#0 TTCTCTGCCAGTTGATCGCCCCATGAGGTTGTCAGAAATTCATGTTGCAGCTGAGCATGC 1800 consensus_9686#1 ------------------------------------------------------------ consensus_9686#0 ACTGAAGCAGACAGTATCTGACCCTAATTTTATGACATCACTTTCATCACTAGAAGAATT 1860 consensus_9686#1 ------------------------------------------------------------ consensus_9686#0 TGAGAAAAGATATATGGAGCTTACTAAAGGCGCAGCTGACAATTATCATCACTCTTGGTG 1920 consensus_9686#1 ------------------------------------------------------------ consensus_9686#0 GAAAAGACATGGAGTTGTGCTAGATGGAGAAATTGCAGCTCTATTCTTTAAGCATGAAAA 1980 consensus_9686#1 ------------------------------------------------------------ consensus_9686#0 TTATGATTTGGCTGCAAAGTCCTATGAGAAAGTTTGTGCTCTCTATTCTGCAGAAGGCTG 2040 consensus_9686#1 ------------------------------------------------------------ consensus_9686#0 GGAAGAGCTGTTGGCAGATGTTCTTCCTGATCTTGCAGAATGCCAGAAGATTCTCAATGA 2100 consensus_9686#1 ------------------------------------------------------------ consensus_9686#0 TGAAGCTGGTTATTTGACTTCCTGTGTGAAGTTACTTTCTCTAGAGAGTGGCTTATTTTC 2160 consensus_9686#1 ------------------------------------------------------------ consensus_9686#0 ATCTAAAGAGCGGCAAGCTTTCCAGTCAGAGGTTGTTCGGCTTGCTCACAGTGAAATGAA 2220 consensus_9686#1 ------------------------------------------------------------ consensus_9686#0 GCATCCTGTGCCCCTTGATGTCTCATCACTTATTACATTTGCTGGAAATCCTGCTCCACC 2280 consensus_9686#1 ------------------------------------------------------------ consensus_9686#0 ACTAGAGTTGTGTGATGGAGATCCTGGTACACTATCTGTAGCTGTTTGGAGTGCCTTCCC 2340 consensus_9686#1 ------------------------------------------------------------ consensus_9686#0 GGATGACATCACACTCGAGTCTCTCAGCTTAAGATTGTCGGCTTCCTCTAGTGCAGATGA 2400 consensus_9686#1 ------------------------------------------------------------ consensus_9686#0 AGGTCTTAAGGCGATAAAGAGTTCAGATGCTCGAGTTCTTGTACCCGGTAGAAATATCAT 2460 consensus_9686#1 ------------------------------------------------------------ consensus_9686#0 CACCTTCGACATTCCTCCTCAAAAGCCTGGATCCTATGTGTTGGGTGCTCTGACGGGCCA 2520 consensus_9686#1 ------------------------------------------------------------ consensus_9686#0 GATTGGCAAGCTATCATTCAGATCGCATGGATTTTCTCAAGATGGTCCAGTGGACACTGA 2580 consensus_9686#1 ------------------------------------------------------------ consensus_9686#0 TGAATTCATGAGCTTTGAGAAGCCAACAAGGCCTGTTTTGAAGGTGAGAAAACCAAGGGC 2640 consensus_9686#1 ------------------------------------------------------------ consensus_9686#0 TTTAGTTGATATTACTCCTGCTGTGTCCTCTGCATTGCTTATGAATGAACTTCAGTGGAT 2700 consensus_9686#1 ------------------------------------------------------------ consensus_9686#0 TGGGTTAATTGTCAAGCCAATAGACTATTCTTTGAAAGATGGCATATTGCATATAGATGC 2760 consensus_9686#1 ------------------------------------------------------------ consensus_9686#0 GGGTGCTGGACTGAAAATTGAGGAGTCCCAGATGATTGAGATAGAAACTTATGGAAGTGA 2820 consensus_9686#1 ------------------------------------------------------------ consensus_9686#0 TGTGGAGCATGTTGGTGGTACTGATGCTTCCAAGACATCATCAAGCTCCACTGATACTCG 2880 consensus_9686#1 ------------------------------------------------------------ consensus_9686#0 TAAGGTTGAGAAGGTCCCTATTGAAGATGGGAAGATAAAAATACCAGACTGGGCTAGTGA 2940 consensus_9686#1 ------------------------------------------------------------ consensus_9686#0 TGTGACTACTCTTGTATGGTTTCCTGTTCGTGCTATTGATGATACAATTGCAAGGGGTGC 3000 consensus_9686#1 ------------------------------------------------------------ consensus_9686#0 ATCGCCAGCATCCCCTCAGAAACAGAGCATAGTAGATGGGATGAGAATGATTGCTCTCAA 3060 consensus_9686#1 ------------------------------------------------------------ consensus_9686#0 GCTTGAATTTGGAGTTTTTCTTAATCAAGTGTTTGAAAGGACTATCGCAGTACATTTCAC 3120 consensus_9686#1 ------------------------------------------------------------ consensus_9686#0 TAACCCATTCCATGTGAGCACACGCGTAGTAGATAAGTGCTATGATGGAACTCTACTACT 3180 consensus_9686#1 ------------------------------------------------------------ consensus_9686#0 GCAGGTGATATTGCATTCTGAAGTGAAGGCCACTCTGCATGTAAAGGATATATGGTTGGA 3240 consensus_9686#1 ------------------------------------------------------------ consensus_9686#0 TCTGCAATCTGGATTTGAACACACAGGAAAGGGAGATGGACGACCAACTTCGAACTTGTT 3300 consensus_9686#1 ------------------------------------------------------------ consensus_9686#0 CCCTCTGGTTATTGCTCCTTCTTCGAGAGCTGGAATCTTATTTGTAATACGTTTAAGTGC 3360 consensus_9686#1 ------------------------------------------------------------ consensus_9686#0 CTTAGGAGATATGGATGAGCTAGAAAAGGCAGATAGCATGTTGAATATTAAGTATGGAAT 3420 consensus_9686#1 ----------------GAGCTAGAAAAGGCAGATAGCATGTTGAATATTAAGTATGGAAT 44 ******************************************** consensus_9686#0 ATCCGGTGACAGAACAACTGGAGCACACTCTCCAGTTCCTGTTAAACCTGATGATTCTGA 3480 consensus_9686#1 ATCCGGTGACAGAACAACTGGAGCACACTCTCCAGTTCCTGTTAAACCTGATGATTCTGA 104 ************************************************************ consensus_9686#0 GGAGCTTGTATTCAAGATTGCGGTGAAGATGAAGCGCCCTGTCCTGGACCCATGTGTGGC 3540 consensus_9686#1 GGAGCTTGTATTCAAGATTGCGGTGAAGATGAAGCGCCCTGTCCTGGACCCATGTGTGGC 164 ************************************************************ consensus_9686#0 AGTTGGGTTCCTTCCGTTTTCTTCGGACTGCTTGAGGGTTGGCCAGCTGGTCAACATGAG 3600 consensus_9686#1 AGTTGGGTTCCTTCCGTTTTCTTCGGACTGCTTGAGGGTTGGCCAGCTGGTCAACATGAG 224 ************************************************************ consensus_9686#0 ATGGAGGGTTGAAAGGCTGAAGAACCCGGAGGATGCCTCTCTGTTAGCCGACGAAATACT 3660 consensus_9686#1 ATGGAGGGTTGAAAGGCTGAAGAACCCGGAGGATGCCTCTCTGTTAGCCGACGAAATACT 284 ************************************************************ consensus_9686#0 TTATCAAGTCGACGCCAACCCACAGAACTGGATGGTTGCTGGGAGGAAATGCGGTCACGT 3720 consensus_9686#1 TTATCAAGTCGACGCCAACCCACAGAACTGGATGGTTGTTGGGAGGAAATGCGGTCACGT 344 ************************************** ********************* consensus_9686#0 ATCGCTGTCAAACAAACAAGGTTCAAGGATAGAGATCACGGTGACGTGCGTGCCGCTGGT 3780 consensus_9686#1 ATCGCTGTCAAACAAACAAGGTTCAAGGATAGAGATCACGGTGACGTGCGTGCCGCTGGT 404 ************************************************************ consensus_9686#0 GTCCGGCTACGTCCATCCGCCGCAGCTGGGCCTGCCGCACGTCGGCGAGGCCAACATCAG 3840 consensus_9686#1 GTCCGGCTACGTCCATCCGCCGCAGATGGGCCTGCCGCACGTCGGAGAGGCCAACATCAG 464 ************************* ******************* ************** consensus_9686#0 CTGCAACCCGGCAGGCCCTCACCTGGTGTGCGTCCTTCCTCCGACACTGAGCACCTCATA 3900 consensus_9686#1 CTGCAACCCGGCAGGCCCTCACCTGGTGTGCGTCCTTCCTCTGACACTGAGCACCTCATA 524 ***************************************** ****************** consensus_9686#0 CTGCATACCGGCTTGATCCATCCATCATACACAGATTGTATGTTAGGCTTGTAGCCTGTA 3960 consensus_9686#1 CTGCATACCGGCTGGATCCATCCATCATACCCAGATTGTATGTTAGGCTTGTAGCCTGTA 584 ************* **************** ***************************** consensus_9686#0 GTAGAAGAGAAATGCCACTTACACTGGTCGGCTTGAGATGTATCGC-CATTTGCACCG-G 4018 consensus_9686#1 GTAGAAGAGAAATGCCACTTACACTGGTCGGCTTGAGATGTATCGCTCATTTGCACCGTG 644 ********************************************** *********** * consensus_9686#0 ATGA-GATGTATGCTGTTTTTGCCGAGACATTCTTTTGTGCAGATGAGTTCTTTTTCGTC 4077 consensus_9686#1 ATGATGATGTATGCTGTTTTTGCCGAGACATTCTTTTGTGCAGATGAGTTCTTTTTCGTC 704 **** ******************************************************* consensus_9686#0 AGTAACATTCAGAACGTGTTCCATTGTTTCATGTACCATAAGATAAGTAACATAATTCTC 4137 consensus_9686#1 AGTAACATTCAGACCGTGTTCCATTGTTTCATGTCCCATAAGATAAGTAACATAATTCTC 764 ************* ******************** ************************* consensus_9686#0 CGTGTATATCAAATCAAGTGATAGACTGGATTTTGAAGTCTACCAGAATTCCGGCACAAG 4197 consensus_9686#1 CGTGAAGGTCAAATCAAGTGATAGCCTGGATTTTGAAGTCTCTTAAAA----GGGA---- 816 **** * **************** **************** * ** ** * consensus_9686#0 AGTTA 4202 consensus_9686#1 ----- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||