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Oryza sativa
cluster # 9699 cluster # 9699       Sequences # 6       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9699#0 length = 2523 sequences # 6  

consensusID : consensus_9699#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 2523
fasta sequence
                              [ACCGCTCTTCTCCAATCTCCACACAGATGTCACTGCAACCTCCTCTCTATCTCTCTCTCTCTCTCTCTTGGTTTTCCGCTAATTAACCGCAGGGAGCGTGAGAAATTAAGTGATTGATTGAGAGATAGTAGTGGGGGTGGAAAAAGGAGGCGCCTTTAGTGGAAAAAGCTGCTCCTTTTTTCGCTTCTTCCTCCGCTCCCATTTCAATTTCGTGCGTGTGGCTTTCTCCTCTCCGCGTTTTGGTTTCCCGCGCGCGGAGGAGGG-AAAGATTTTGCCGTGTTCTTGCCGGCG----GCGAGCCGCCATGGAGGCGGCCGAATCCTTGGAGTATGAGCTGCAGAAGGAGGTCTCCAACATCATGATCCAGAGCTACATTACTAGCATGCGTCGAGAGTTCGAGACAAAGTTATGGGAGAATCAGAACTGCATTAGTACCTTGAACAAAAACTGGAAGGAAAAGATATCTAAGATTGCCGCACTGCGAGATGAACTCAGTACTATTTACAGTGTTGTATCAGCTTCAGAATCTGGTGTGTTTTCTTCTCATGGTAGTCACGAAAAGGTCGAAGAGCTCAACTTTTTGAAGATGAAGGATGATAACGAGTCATCAATCACAGAGAGAACTACAGATTCAGGTGAGCTCATGTTTGATATCCCGGACTTCTCACTCTTAAAGCACATGCCAAGTGAAGAAGTCACAAATTTTCTAAAATCAGAATGGCTGAAGTTGCGAAGACAGCACGAGTCTGAATTGCATGAGAAAACAGAAGAGTTGTTTAGGCTAAAAAGGGAATTTGCGAAAGATATAGCTTTGTTGCCTTCTAGGAAAGAGAGAGAACTTGAAATCATCAAATCAAAGTTGCTTCAAAGCATTTCAAAATTGGATGAAATCACCTTGAGAGAAGATAACCCTTATTGTGATAATTATGATGGTGCCGAGGTTTGCGGATTTGAGGACAGAATCGGCTCTTTACTTCATGAAAATGAACAACTACAAGGTTTGCTAGCTGACAAAAAAATGGTGGCTAAACATCTGTCTTTACAAGTATTAGATGCAGAGAGGAAAATGGCACAGCACTCGTTGTCCGAGTTAAAACTTGTGAAACAAGTTGAGAAGCTTAGCCATGAACTTGAAGATTTAAAGATTGAGAGCCACATTAAAGATTTATTGGAGCTGTCGACATTAAGAGAAGTTTTTGATAATTATGAGAATCATATTGATGATGCTAATCAGGAGGAGACCTTCCTCAGAGAGTTGCTTATAGAAAAAGAAGAGCAGTTGAGTATTATGTATGAAGACAGACAGAAGCTAAAGTATGAAAACAATCAACTTGTAGCAATTGCAGGATCAACATTAATGCAGCACCATGAGCAAGTCAACTTGGTTAATGACCTTACCAATTTTAGGGAGAAGGTGTGCGAGCAAGAGTTGTTGATCTTAGAGTCCAAGAGTGAGTCTAATTCAATGAAGAGTAGCTTGTATGAGGCTTTGCAGCAAATTAATGTATGCAAGCAAGAGATACATGGTCTGACTGACAACTTAACTGCCATGTCTATTGCTTTGGAGGAAGCCAAAGAACAGAATGCCTCACTTGATGCCACCATCCAGGAAATGAAGAAAACATCGGCGCCAAGCATTAACAGTCATAAGGGACAAGCAGGGCACCTAGAATATGCCCTTGTTAGTATGGAGAAGTTATCTAAATCATACAGCGATTTTGAAAGCAGATTGGCTCAAAGTATGAAGAGAAATGAAATTAGGTTGACTAATATAATTTGCCAGTTTAACCCACTGGTGCAGCAAGTTGCTGTATTAAAGAAAAAAGAATTCTGGTATAAACAGATACTCGAGATTAAATGCTCTAATCTCCAGAAAGCAGAAGCTGAGGTTGATATACTTGGGGATGAAGTTGATGCTCTTCTTAGTATTCTTGGGAAGATCTACATAGCACTTGATCATTATTCTCCTGTATTGAAGCATTATCCTGGGGTTACAGAGATTTTGAATCTGGTTCAGAAAGCATTGAAAGGAGAAAGTATTTAGTAGGATCAGGAAAAACCTTAACACTATTCATGAAAAGGCTTGACATGGATAGAATTATGACTGAGATTTTTCAATACTTCAGTTACCTGATTGCCGTAGGCA-AATTTTTTTTGCATTGTCTCACAGGGAAGAAAGATTAAGATCTTAACACACAAAGGCAAAGCATAGTAAACTAGCTAGCTACCATTGTTCCATTGATAGGGTTACCAACCGCATCTGTTGATTTATATGATTGTATCAGTGTTCAGTTAGTGGTGTTGTGAGTACAGTAGTACAGGCTTATAGGGTCTATTTGTATTGGTTGTAGTTTCAGGTTTCACTGTGAGTAGTTTACTTGTCTGCATGCAACAAAGTGCAGCTTGCTATAGTTATAGATGGTTTTGTCAGTGATCTTTTTTAGATGGCTTTGTAAAGATTCTTTGTGGAATGGAAGGCAGTAGGTAGGAGTTGTAATATCAGGTGGCTAATTAATGAAATCTGTG]

[+] EMBL CB635011             [ACCGCTCTTCTCCAATCTCCACACAGATGTCACTGCAACCTCCTCTCTATCTCTCTCTCTCTCTCTCTTGGTTTTCCGCTAATTAACCGCAGGGAGCGTGAGAAATTAAGTGATTGATTGAGAGATAGTAGTGGGGGTGGAAAAAGGAGGCGCCTTTAGTGGAAAAAGCTGCTCCTTTTTTCGCTTCTTCCTCCGCTCCCATTTCAATTTCGTGCGTGTGGCTTTCTCCTCTCCGCGTTTTGGTTTCCCGCGCGCGGAGGAGGG AAAGATTTTGCCGTGTTCTTGCCGGCG    GCGAGCCGCCATGGAGGCGGCCGAATCCTTGGAGTATGAGCTGCAGAAGGAGGTCTCCAACATCATGATCCAGAGCTACATTACTAGCATGCGTCGAGAGTTCGAGACAAAGTTATGGGAGAATCAGAACTGCATTAGTACCTTGAACAAAAACTGGAAGGAAAAGATATCTAAGATTGCCGCACTGCGAGATGAACTCAGTACTATTTACAGTGTTGTATCAGCTTCAGAATCTGGTGTGTTTTCTTCTCATGGTAGTCACGAAAAGGTCGAAGAGCTCAACTTTTTGAAGATGAAGGATGATAACGAGTCATCAATCACAGAGAGAACTACAGATTCAGATGAGCTCATGTTTGATATCCCGGACTTCTCACTCTTAAAGCACATGCCAAGTGAAGAAGTCACAAAATTTCTAAAATCAGAATGGCTGAAGTTGCGAAGACAGCACGAGTCTGAATTGCATGAGATAACAGAGGAGTTGTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL AK070162             [                                                                                                                                                               TGGAAAAAGCTGCTCCTTTTTTCGCTTCTTCCTCCGCTCCCATTTCAATTTCGTGCGTGTGGCTTTCTCCTCTCCGCGTTTTGGTTTCCCGCGCGCGGAGGAGGG AAAGATTTTGCCGTGTTCTTGCCGGCG    GCGAGCCGCCATGGAGGCGGCCGAATCCTTGGAGTATGAGCTGCAGAAGGAGGTCTCCAACATCATGATCCAGAGCTACATTACTAGCATGCGTCGAGAGTTCGAGACAAAGTTATGGGAGAATCAGAACTGCATTAGTACCTTGAACAAAAACTGGAAGGAAAAGATATCTAAGATTGCCGCACTGCGAGATGAACTCAGTACTATTTACAGTGTTGTATCAGCTTCAGAATCTGGTGTGTTTTCTTCTCATGGTAGTCACGAAAAGGTCGAAGAGCTCAACTTTTTGAAGATGAAGGATGATAACGAGTCATCAATCACAGAGAGAACTACAGATTCAGGTGAGCTCATGTTTGATATCCCGGACTTCTCACTCTTAAAGCACATGCCAAGTGAAGAAGTCACAAATTTTCTAAAATCAGAATGGCTGAAGTTGCGAAGACAGCACGAGTCTGAATTGCATGAGAAAACAGAAGAGTTGTTTAGGCTAAAAAGGGAATTTGCGAAAGATATAGCTTTGTTGCCTTCTAGGAAAGAGAGAGAACTTGAAATCATCAAATCAAAGTTGCTTCAAAGCATTTCAAAATTGGATGAAATCACCTTGAGAGAAGATAACCCTTATTGTGATAATTATGATGGTGCCGAGGTTTGCGGATTTGAGGACAGAATCGGCTCTTTACTTCATGAAAATGAACAACTACAAGGTTTGCTAGCTGACAAAAAAATGGTGGCTAAACATCTGTCTTTACAAGTATTAGATGCAGAGAGGAAAATGGCACAGCACTCGTTGTCCGAGTTAAAACTTGTGAAACAAGTTGAGAAGCTTAGCCATGAACTTGAAGATTTAAAGATTGAGAGCCACATTAAAGATTTATTGGAGCTGTCGACATTAAGAGAAGTTTTTGATAATTATGAGAATCATATTGATGATGCTAATCAGGAGGAGACCTTCCTCAGAGAGTTGCTTATAGAAAAAGAAGAGCAGTTGAGTATTATGTATGAAGACAGACAGAAGCTAAAGTATGAAAACAATCAACTTGTAGCAATTGCAGGATCAACATTAATGCAGCACCATGAGCAAGTCAACTTGGTTAATGACCTTACCAATTTTAGGGAGAAGGTGTGCGAGCAAGAGTTGTTGATCTTAGAGTCCAAGAGTGAGTCTAATTCAATGAAGAGTAGCTTGTATGAGGCTTTGCAGCAAATTAATGTATGCAAGCAAGAGATACATGGTCTGACTGACAACTTAACTGCCATGTCTATTGCTTTGGAGGAAGCCAAAGAACAGAATGCCTCACTTGATGCCACCATCCAGGAAATGAAGAAAACATCGGCGCCAAGCATTAACAGTCATAAGGGACAAGCAGGGCACCTAGAATATGCCCTTGTTAGTATGGAGAAGTTATCTAAATCATACAGCGATTTTGAAAGCAGATTGGCTCAAAGTATGAAGAGAAATGAAATTAGGTTGACTAATATAATTTGCCAGTTTAACCCACTGGTGCAGCAAGTTGCTGTATTAAAGAAAAAAGAATTCTGGTATAAACAGATACTCGAGATTAAATGCTCTAATCTCCAGAAAGCAGAAGCTGAGGTTGATATACTTGGGGATGAAGTTGATGCTCTTCTTAGTATTCTTGGGAAGATCTACATAGCACTTGATCATTATTCTCCTGTATTGAAGCATTATCCTGGGGTTACAGAGATTTTGAATCTGGTTCAGAAAGCATTGAAAGGAGAAAGTATTTAGTAGGATCAGGAAAAACCTTAACACTATTCATGAAAAGGCTTGACATGGATAGAATTATGACTGAGATTTTTCAATACTTCAGTTACCTGATTGCCGTAGGCA AATTTTTTTTGCATTGTCTCACAGGGAAGAAAGATTAAGATCTTAACACACAAAGGCAAAGCATAGTAAACTAGCTAGCTACCATTGTTCCATTGATAGGGTTACCAACCGCATCTGTTGATTTATATGATTGTATCAGTGTTCAGTTAGTGGTGTTGTGAGTACAGTAGTACAGGCTTATAGGGTCTATTTGTATTGGTTGTAGTTTCAGGTTTCACTGTGAGTAGTTTACTTGTCTGCATGCAACAAAGTGCAGCTTGCTATAGTTATAGATGGTTTTGTCAGTGATCTTTTTTAGATGGCTTTGTAAAGATTCTTTGTGGAATGGAAGGCAGTAGGTAGGAGTTGTAATATCAGGTGGCTAATTAATGAAATCTGTG]
[+] EMBL BF475219             [                                                                                                                                                                                                   CTCCCATTTCAATTTCGTGCGTGTGGCTTTCTCCTCTCCGCGTTTTGGTTTCCCGCGCGCGGAGAAGGGAAAAGATTTTGCCGTGTTCTTGCCGGCGGCGAGCGAGCCGCCATGGAGGCGGCCGAATCCTTGGAGTATGAGCTGCAGAAGGAGGTCTCCAACATCATGATCCAGAGCTACATTACTAGCATGCGTCGAGAGTTCGAGACAAAGTTATGGGAGAATCAGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL BF475217             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           AGTGTTGTATCAGCTTCAGAATCTGGTGTGTTTTCTTCTCATGGTAGTCACGAAAAGGTCGAAGAGCTCAACTTTTTGAAGATGAAGGATGATAACGAGTCATCAATCACAGAGAGAATTACAGATTCAGGTGAGCTCATGCTTGATATCCCGGACTTCTCACTCTTAAAGCACATGCCAAGTGAAGAAGTCACAAATTTTCTAAAATCAGAATGGCTGAAGTTGCGAAGACAGCATGAATCTGAATTGCATGAGAAAACAGAAGAGTTGTTTAGGCTAAAAAGGGAATTTGCGAAAGATATAGCTTTGTTGCCTTCTAGGAAAGAGAGAGAACTTGAAATCATCAAATCAAAGTTGCCTCAAAGCATTTCAAAATTGGATGAAATCACCTCGAGAGAAGATAACCCTTATTGTGATAATTATGATGATGCCGAGGTTTGCGGATTTGAGGACAGAATCGGCTCTTTACTTCATGAAAATGAACAACTACAAGGTTTGCTAGCTGACAAAAAAATGGTGGCTAAACATCTGTCTTTACAAGTATTAGATGCAGAGAGGAAAATGGCACAGCACTCGTTGTCCGAGTTAAAACTTGTGAAACAAATTGAGAAGCTTA CCATGAACTTGAAGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL CB635012             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                AGATTGGCTCAAAGTATGAAGAGAAATGAAATTAGGTTGACTAATATAATTTGCCAGTTTAACCCACTGGTGCAGCAAGTTGCTGTATTAAAGAAAAAAGAATTCTGGTATAAACAGATACTCGAGATTAAATGCTCTAATCTCCAGAAAGCAGAAGCTGAGGTTGATATACTTGGGGATGAAGTTGATGCTCTTCTTAGTATTCTTGGGAAGATCTACATAGCACTTGATCATTATTCTCCTGTATTGAAGCATTATCCTGGGGTTACAGAGATTTTGAATCTGGTTCAGAAAGCATTGAAAGGAGAAAGTATTTAGTAGGATCAGGAAAAACCTTAACACTATTCATGAAAAGGCTTGACATGGATAGAATTATGACTGAGATTTTTCAATACTTCAGTTACCTGATTGCCGTAGGCA AATTTTTTTTGCATTGTCTCACAGGGAAGAAAGATTAAGATGTTAACACACAAAGGCAAAGCATAGTAAACTAGCTAGCTACCATTGTTCCATTGATAGGGTTACCAACCGCATCTGTTGATTTATATGATTGTATCAGTGTTCAGTTAGTGGTGTTGTGAGTACAGTAGTACAGGCTTATAGGGTCTATTTGTATTGGTTGTAGTTTCAGGTTTCACTGTGAGTAGTTTACTTGTCTGCATGCAACAAAGTGCAGCTTGGTATAGTTATAGATGGTTTTGTCAGTGATCTTTTTTAGATGGCTTTGTAAAGATTCTTTGTGGAATTGAAAGGAGTAGGTAGGAGT                                  ]
[+] EMBL CB680748             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CGGAGGCATTATTTTTTTTGCATTGTCTCACAGGGAAGAAAGATTAAGATCTTAACACACAAAGGCAAAGCATAGTAAACTAGCTAGCTACCATTGTTCCATTGATAGGGTTACCAACCGCATCTGTTGATTTATATGATTGTATCAGTGTTCAGTTAGTGGTGTTGTGAGTACAGTAGTACAGGCTTATAAGGTCTATTTGTATTGGTTGTAGTTTCAGGTTTCACTGTGAGTAGTTTACTTGGCTGCATGCAACAAAGTGCAGCTTGCTATAGTTATAGATGGTTTTGTCAGTGATCTTTTTTAGATGGCTTTGTAAAGATTCTTTGTGGAATGGAAGGCAGTAGGTAGGAGTTGTAATATCAGGTGGCTAATTAATGAAATCTGTG]


>consensus_9699#0 ACCGCTCTTCTCCAATCTCCACACAGATGTCACTGCAACCTCCTCTCTATCTCTCTCTCT CTCTCTCTTGGTTTTCCGCTAATTAACCGCAGGGAGCGTGAGAAATTAAGTGATTGATTG AGAGATAGTAGTGGGGGTGGAAAAAGGAGGCGCCTTTAGTGGAAAAAGCTGCTCCTTTTT TCGCTTCTTCCTCCGCTCCCATTTCAATTTCGTGCGTGTGGCTTTCTCCTCTCCGCGTTT TGGTTTCCCGCGCGCGGAGGAGGGAAAGATTTTGCCGTGTTCTTGCCGGCGGCGAGCCGC CATGGAGGCGGCCGAATCCTTGGAGTATGAGCTGCAGAAGGAGGTCTCCAACATCATGAT CCAGAGCTACATTACTAGCATGCGTCGAGAGTTCGAGACAAAGTTATGGGAGAATCAGAA CTGCATTAGTACCTTGAACAAAAACTGGAAGGAAAAGATATCTAAGATTGCCGCACTGCG AGATGAACTCAGTACTATTTACAGTGTTGTATCAGCTTCAGAATCTGGTGTGTTTTCTTC TCATGGTAGTCACGAAAAGGTCGAAGAGCTCAACTTTTTGAAGATGAAGGATGATAACGA GTCATCAATCACAGAGAGAACTACAGATTCAGGTGAGCTCATGTTTGATATCCCGGACTT CTCACTCTTAAAGCACATGCCAAGTGAAGAAGTCACAAATTTTCTAAAATCAGAATGGCT GAAGTTGCGAAGACAGCACGAGTCTGAATTGCATGAGAAAACAGAAGAGTTGTTTAGGCT AAAAAGGGAATTTGCGAAAGATATAGCTTTGTTGCCTTCTAGGAAAGAGAGAGAACTTGA AATCATCAAATCAAAGTTGCTTCAAAGCATTTCAAAATTGGATGAAATCACCTTGAGAGA AGATAACCCTTATTGTGATAATTATGATGGTGCCGAGGTTTGCGGATTTGAGGACAGAAT CGGCTCTTTACTTCATGAAAATGAACAACTACAAGGTTTGCTAGCTGACAAAAAAATGGT GGCTAAACATCTGTCTTTACAAGTATTAGATGCAGAGAGGAAAATGGCACAGCACTCGTT GTCCGAGTTAAAACTTGTGAAACAAGTTGAGAAGCTTAGCCATGAACTTGAAGATTTAAA GATTGAGAGCCACATTAAAGATTTATTGGAGCTGTCGACATTAAGAGAAGTTTTTGATAA TTATGAGAATCATATTGATGATGCTAATCAGGAGGAGACCTTCCTCAGAGAGTTGCTTAT AGAAAAAGAAGAGCAGTTGAGTATTATGTATGAAGACAGACAGAAGCTAAAGTATGAAAA CAATCAACTTGTAGCAATTGCAGGATCAACATTAATGCAGCACCATGAGCAAGTCAACTT GGTTAATGACCTTACCAATTTTAGGGAGAAGGTGTGCGAGCAAGAGTTGTTGATCTTAGA GTCCAAGAGTGAGTCTAATTCAATGAAGAGTAGCTTGTATGAGGCTTTGCAGCAAATTAA TGTATGCAAGCAAGAGATACATGGTCTGACTGACAACTTAACTGCCATGTCTATTGCTTT GGAGGAAGCCAAAGAACAGAATGCCTCACTTGATGCCACCATCCAGGAAATGAAGAAAAC ATCGGCGCCAAGCATTAACAGTCATAAGGGACAAGCAGGGCACCTAGAATATGCCCTTGT TAGTATGGAGAAGTTATCTAAATCATACAGCGATTTTGAAAGCAGATTGGCTCAAAGTAT GAAGAGAAATGAAATTAGGTTGACTAATATAATTTGCCAGTTTAACCCACTGGTGCAGCA AGTTGCTGTATTAAAGAAAAAAGAATTCTGGTATAAACAGATACTCGAGATTAAATGCTC TAATCTCCAGAAAGCAGAAGCTGAGGTTGATATACTTGGGGATGAAGTTGATGCTCTTCT TAGTATTCTTGGGAAGATCTACATAGCACTTGATCATTATTCTCCTGTATTGAAGCATTA TCCTGGGGTTACAGAGATTTTGAATCTGGTTCAGAAAGCATTGAAAGGAGAAAGTATTTA GTAGGATCAGGAAAAACCTTAACACTATTCATGAAAAGGCTTGACATGGATAGAATTATG ACTGAGATTTTTCAATACTTCAGTTACCTGATTGCCGTAGGCAAATTTTTTTTGCATTGT CTCACAGGGAAGAAAGATTAAGATCTTAACACACAAAGGCAAAGCATAGTAAACTAGCTA GCTACCATTGTTCCATTGATAGGGTTACCAACCGCATCTGTTGATTTATATGATTGTATC AGTGTTCAGTTAGTGGTGTTGTGAGTACAGTAGTACAGGCTTATAGGGTCTATTTGTATT GGTTGTAGTTTCAGGTTTCACTGTGAGTAGTTTACTTGTCTGCATGCAACAAAGTGCAGC TTGCTATAGTTATAGATGGTTTTGTCAGTGATCTTTTTTAGATGGCTTTGTAAAGATTCT TTGTGGAATGGAAGGCAGTAGGTAGGAGTTGTAATATCAGGTGGCTAATTAATGAAATCT GTG



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)