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Oryza sativa
cluster # 9702 cluster # 9702       Sequences # 6       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9702#0 length = 1566 sequences # 6  

consensusID : consensus_9702#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1566
fasta sequence
                              [CCATCCACCCGCACCCTCCCAATTCTTCCCACGAAAACCTCCCAAATTCCGTAGCCGATCTCTCCCCCCCACCGGCGGCCGCCGCCGATGGAGACCTAACGCCGGATCGATCTCTCCCACCGGCCCGAGGCGGGTGAGGCAGGGCGCGTCGCCTCCATGGAGACCGAGCGGATCCGTCACCTCCTCCTCCTCACGCTCCGCGCGCCGCACGCCCGCCTCGCCCTCGTGGGTGGCAACCACACCGCCGCCCGCTTCTGCACCCGCTAATCCCCCCCTCCCTCGCCGGAAGACTCATCATCCTCTTCGTCTTCGCCACCGTCTCTGTGCGGTATAGCTCTCTCTCTCGCTCGCTCGCTCAGATGCCGGACGGCTGCGTGGTGATCCGGCTCCCGGACCCGCGCGTCCTCCGCGTGATCGCGCGCTCGGTGCTCCTCGCCGTCGCGCTGCTCTCCCTGGCCTGGCTCCGCGATGCCGAGGCCCCCGCCGGGGACGCGCTCCAGGTGGGGCTCCTGCTCCGCGACCTCCGCCGCGAGGGCCTGCTCGCCCCCGGCGCGCGCGCCGTCTTCCTCGGCGCCGCCGATGGAGACTGCCACCACCACCCTCCCGCCCTCGACGGCGACGACATGCGACGCATCACGCCGCGGGAGTTGCTGACGACGGGGGACCTGTCCGTCGACTTCGTGCTGGATTTCGGCTACTTCGACAAGGACGGCGACAGGGTTGGCCTCGTCGACAGGGTGCTCAAGGATGGCGGCATCTTTGCCGCCCCAATTGGCTCGGCGAGCGAGTTCCGCTTGCCGCCGAACTACCGCGTGGTTTACATCCGTCGGTTCACCGAGACTTTCGTCGGGATCAAGAAGATTGCCCGCGTCGGCGGCGACAATGGGATTGCCGGCGCCAGAACAGGGATGGCAGCGACGACTCCTGCTCTGAAGGAAGGAGTTCTTGCGTTTTCTGCTCAAACAGCTGACACTGCCCTCGCTGAACTCAAGAACTTCAGGAGGAAGCTCTTACTGCCTCACATCACTGGAGCATCAGCGGCTCACGCGCATCAAGCGTGGCTAAAATTGCGTCATCGTCCAGTGATTGCAGTTGATTTCCCAGCAATGTGGAATGTGAATAAGCTGCAGCCAGCACATCCTCTCGTCCTTCAGGATAAGGCTGTTCATGGAGCGCAACAGCAGCAGCTCAACAGGAGCGTGAGACTGAACCCATCTACAGGATATTGAAACGAAGCCTGAATTGGAACAGGGAAAAAGCTCAACTGAAGAAGAGCATTCTTGTCCATTGCAAATCCAGGGGGGTGATGCTCTCTGCCTGCCAAAAGAAATGGTTGGTTTGCTTTTTTCTGAAGTTCTTTATTTAAGTTGTCTGTCGTGCGTGATGATTGAGTTTGATGGTGTGCTACTGCTTACCAGTATGTGTGTATGCTTCGTTCGATAGTCTCCAATTTGTTGTTTTGTATTCAGTGGTGACTGGTGATCTACTGATCTCCAATTGCACTACTGTATGGTATCCGTTTGGAATGAGCATTGTTCGTCTTGATCAAAAAAAAAAAAAAAAAGA]

[+] EMBL AK069088             [CCATCCACCCGCACCCTCCCAATTCTTCCCACGAAAACCTCCCAAATTCCGTAGCCGATCTCTCCCCCCCACCGGCGGCCGCCGCCGATGGAGACCTAACGCCGGATCGATCTCTCCCACCGGCCCGAGGCGGGTGAGGCAGGGCGCGTCGCCTCCATGGAGACCGAGCGGATCCGTCACCTCCTCCTCCTCACGCTCCGCGCGCCGCACGCCCGCCTCGCCCTCGTGGGTGGCAACCACACCGCCGCCCGCTTCTGCACCCGCTAATCCCCCCCTCCCTCGCCGGAAGACTCATCATCCTCTTCGTCTTCGCCACCGTCTCTGTGCGGTATAGCTCTCTCTCTCGCTCGCTCGCTCAGATGCCGGACGGCTGCGTGGTGATCCGGCTCCCGGACCCGCGCGTCCTCCGCGTGATCGCGCGCTCGGTGCTCCTCGCCGTCGCGCTGCTCTCCCTGGCCTGGCTCCGCGATGCCGAGGCCCCCGCCGGGGACGCGCTCCAGGTGGGGCTCCTGCTCCGCGACCTCCGCCGCGAGGGCCTGCTCGCCCCCGGCGCGCGCGCCGTCTTCCTCGGCGCCGCCGATGGAGACTGCCACCACCACCCTCCCGCCCTCGACGGCGACGACATGCGACGCATCACGCCGCGGGAGTTGCTGACGACGGGGGACCTGTCCGTCGACTTCGTGCTGGATTTCGGCTACTTCGACAAGGACGGCGACAGGGTTGGCCTCGTCGACAGGGTGCTCAAGGATGGCGGCATCTTTGCCGCCCCAATTGGCTCGGCGAGCGAGTTCCGCTTGCCGCCGAACTACCGCGTGGTTTACATCCGTCGGTTCACCGAGACTTTCGTCGGGATCAAGAAGATTGCCCGCGTCGGCGGCGACAATGGGATTGCCGGCGCCAGAACAGGGATGGCAGCGACGACTCCTGCTCTGAAGGAAGGAGTTCTTGCGTTTTCTGCTCAAACAGCTGACACTGCCCTCGCTGAACTCAAGAACTTCAGGAGGAAGCTCTTACTGCCTCACATCACTGGAGCATCAGCGGCTCACGCGCATCAAGCGTGGCTAAAATTGCGTCATCGTCCAGTGATTGCAGTTGATTTCCCAGCAATGTGGAATGTGAATAAGCTGCAGCCAGCACATCCTCTCGTCCTTCAGGATAAGGCTGTTCATGGAGCGCAACAGCAGCAGCTCAACAGGAGCGTGAGACTGAACCCATCTACAGGATATTGAAACGAAGCCTGAATTGGAACAGGGAAAAAGCTCAACTGAAGAAGAGCATTCTTGTCCATTGCAAATCCAGGGGGGTGATGCTCTCTGCCTGCCAAAAGAAATGGTTGGGTTGCTTTTTTCTGAAGTTCTTTATTTAAGTTGTCTGTCGTGCGTGATGATTGAGTTTGATGGTGTGCTACTGCTTACCAGTATGTGTGTATGCTTCGTTCGATAGTCTCCAATTTGTTGTTTTGTATTCAGTGGTGACTGGTGATCTACTGATCTCCAATTGCACTACTGTATGGTATCCGTTTGGAATGAGCATTGTTCGT                          ]
[+] EMBL CB661599             [                           CCCACGAAAACCTCCCAAATTCCGTAGCCGATCTCTCCCCCCCACCGGCGGCCGCCGCCGATGGAGACCTAACGCCGGATCGATCTCTCCCACCGGCCCGAGGCGGGTGAGGCAGGGCGCGTCGCCTCCATGGAGACCGAGCGGATCCGTCACCTCCTCCTCCTCACGCTCCGCGCGCCGCACGCCCGCCTCGCCCTCGTGGGTGGCAACCACACCGCCGCCCGCTTCTGCACCCGCTAATCCCCCCCTCCCTCGCCGGAAGACTCATCATCCTCTTCGTCTTCGCCACCGTCTCTGTGCGGTATAGCTCTCTCTCTCGCTCGCTCGCTCAGATGCCGGACGGCTGCGTGGTGATCCGGCTCCCGGACCCGCGCGTCCTCCGCGTGATCGCGCGCTCGGTGCTCCTCGCCGTCGCGCTGCTCTCCCTGGCCTGGCTCCGCGATGCCGAGGCCCCCGCCGGGGACGCGCTCCAGGTGGGGCTCCTGCTCCGCGACCTCCGCCGCGAGGGCCTGCTCGCCCCCGGTGCGCGCGCCGTCTTCCTCGGCGCCGCCGATGGAGACTGCCACCACCACCCTCCCGCCCTCGACGGCGACGACATGCGACGCATCACGCCGCGGGAGTTGCTGACGACGGGGGACCTGTCCGTCGACTTCGTGCTGGATT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CB625695             [                                                                                                                                                                                                                                                                                                     ATCATCCCCTTCGTCTTCGCCACCGTCTCTGTGCGGTATAGCTCTCTCTCTCGCTCGCTCGCTCAGATGCCGGACGGCTGCGTGGTGATCCGGCTCCCGGACCCGCGCGTCCTCCGCGTGATCGCGCGCTCGGTGCTCCTCGCCGTCGCGCTGCTCTCCCTGGCCTGGCTCCGCGATGCCGAGGCCCCCGCCGGGGACGCGCTCCAGGTGGGGCTCCTGCTCCGCGACCTCCGCCGCGAGGGCCTGCTCGCCCCCGGCGCGCGCGCCGTCTTCCTCGGCGCCGCCGATGGAGACTGCCACCACCACCCTCCCGCCCTCGACGGCGACGACATGCGACGCATCATGCCGCGGGAGTTGCTGACGACGGGGGACCTGTCCGTCGACTTTGTGCTGGATTTCGGCTACTTCGACAAGGACGGCGACAGGGTTGGCCTCGTCGACAGGGTGCTCAAGGATGGCGGCATCTTTGCCGCCCCAATTGGCTCGGCGAGCGCGTTCCGCTTGCCGCCGAACTACCGCGTGGTTTACATCCGTCGGTTCACCGAGACTTTCGTCGGGATCAAGAAGATTGCCCGCGTCGGCGGCGACAATGGGATTGCCGGCGCCAGAACAGGGATGGCAGCGACGACTCCTGCTCTGAAGGAAGGAGTTCTTGCGTTTTCTGCTCAAACAGCTGACACTGCCCTCGCTGAACTCAAGAACTTCAGGAGGAAGCTCTTACTGCCTCACATCACTGGAGCATCAGCGGCTCACGCGCATC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CA997834             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  TCGGCTACTTCGACAAGGACGGCGACAGGGTTGGCCTCGTCGACAGGGTGCTCAAGGATGGCGGCATCTTTGCCGCCCCAATTGGCTCGGCGAGCGAGTTCCGCTTGCCGCCGAACTACCGCGTGGTTTACATCCGTCGGTTCACCGAGACTTTCGTCGGGATCAAGAAGATTGCCCGCGTCGGCGGCGACAATGGGATTGCCGGCGCCAGAACAGGGATGGCAGCGACGACTCCTGCTCTGAAGGAAGGAGTTCTTGCGTTTTCTGCTCAAACAGCTGACACTGCCCTCGCTGAACTCAAGAACTTCAGGAGGAAGCTCTTACTGCCTCACATCACTGGAGCATCAGCGGCTCACGCGCATCAAGCGTGGCTAAAATTGCGTCATCGTCCAGTGATTGCAGTTGATTTCCCAGCAATGTGGAATGTGAATAAGCTGCAGCCAGCACATCCTCTCGTCCTTCAGGATAAGGCTGTTCATGGAGCGCAACAGCAGCAGCTCAACAGGAGCGTGAGACTGAACCCATCTACAGGATATTGAAACGAAGCCTGAATTGGAACAGGGAAAAAGCTCAACTGAAGAAGAGCATTCTTGTCCATTGCAAATCCAGGGGGGTGATGCTCTCTGCCTGCCCAAAGAAATGGTTGGTTTGCTTTTTTCTGAAGTTCTTTATTTAAGTTGTCTGTCGTGCGTGATGATTG                                                                                                                                                                                ]
[-] EMBL CB661600             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          TCGGTTCACCGAGACTTTCGTCGGGATCAAGAAGATTGCCCGCGTCGGCGGCGACAATGGGATTGCCGGCGCCAGAACAGGGATGGCAGCGACGACTCCTGCTCTGAAGGAAGGAGTTCTTGCGTTTTCTGCTCAAACAGCTGACACTGCCCTCGCTGAACTCAAGAACTTCAGGAGGAAGCTCTTACTGCCTCACATCACTGGAGCATCAGCGGCTCACGCGCATCAAGCGTGGCTAAAATTGCGTCATCGTCCAGTGATTGCAGTTGATTTCCCAGCAATGTGGAATGTGAATAAGCTGCAGCCAGCACATCCTCTCGTCCTTCAGGATAAGGCTGTTCATGGAGCGCAACAGCAGCAGCTCAACAGGAGCGTGAGACTGAACCCATCTACAGGATATTGAAACGAAGCCTGAATTGGAACAGGGAAAAAGCTCAACTGAAGAAGAGCATTCTTGTCCATTGCAAATCCAGGGGGGTGATGCTCTCTGCCTGCCAAAAGAAATGGTTGGTTTGCTTTTTTCTGAAGTTCTTTATTTAAGTTGTCTGTCGTGCGTGATGATTGAGTTTGATGGTGTGCTACTGCTTACCAGTATGTGTGTATGCTTCGTTCGATAGTCTCCAATTTGTTGTTTTGTATTCAGTGGTGACTGGTGATCTACTGATCTCCAATTGCACTACTGTATGGTATCCGTTTGGAATGAGCATTGTTCGTCTTGATCAAAAAAAAAAAAAAAAAGA]
[-] EMBL CB625696             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             TTGCCCGCGTCGGCGGCGACAATGGGATTGCCGGCGCCAGAACAGGGATGGCAGCGACGACTCCTGCTTTGAAGGAAGGAGTTCTTGCGTTTTTTGCTCAAACAGTTGACACTGCCCTCGCTGAACTCAAGAACTTCAGGAGGAAGCTCTTACTGCCTCACATCACTGGAGCATCAGCGGCTCACGCGCATCAAGGGTGGCTAAAATTGCGTCATCGTCCAGTGATTGCAGTTGATTTCCCAGCAATGTGGAATGTGAATAAGCTGCAGCCAGCACATCCTTTCGTCCTTCAGGATAAGGCTGTTCATGGAGCGCAACAGCAGCAGCTCAACAGGAGCGTGAGACTGAACCCATTTCCAGGATATTGAAACGAACCCTGAATTGGAACAGGGAAAAAGCTCAACTGAAGAAGAGCATTTTTGTCCATTGCAAATCCAGGGGGGTGATGCTCTCTCCCTGCCAAAAGAAATGGTTGGTTTGCTTGTTTCTGAAGTTCTTTATTTAAGTTGTCTGTCGTGCGTGATGATTGAGTTTGATGGTGTGTTACTGCTTACCAGTATGTGTGTATGCTTCGTTCGATAGTCTCCAATTTGTTGTTTGGTATTCAGTGGTGACTGGTGATTTACTGATCTCCAATTGCACTACTGTATGGTATCCGTTTGGAATGATCAAGGGTCTTC                         ]


>consensus_9702#0 CCATCCACCCGCACCCTCCCAATTCTTCCCACGAAAACCTCCCAAATTCCGTAGCCGATC TCTCCCCCCCACCGGCGGCCGCCGCCGATGGAGACCTAACGCCGGATCGATCTCTCCCAC CGGCCCGAGGCGGGTGAGGCAGGGCGCGTCGCCTCCATGGAGACCGAGCGGATCCGTCAC CTCCTCCTCCTCACGCTCCGCGCGCCGCACGCCCGCCTCGCCCTCGTGGGTGGCAACCAC ACCGCCGCCCGCTTCTGCACCCGCTAATCCCCCCCTCCCTCGCCGGAAGACTCATCATCC TCTTCGTCTTCGCCACCGTCTCTGTGCGGTATAGCTCTCTCTCTCGCTCGCTCGCTCAGA TGCCGGACGGCTGCGTGGTGATCCGGCTCCCGGACCCGCGCGTCCTCCGCGTGATCGCGC GCTCGGTGCTCCTCGCCGTCGCGCTGCTCTCCCTGGCCTGGCTCCGCGATGCCGAGGCCC CCGCCGGGGACGCGCTCCAGGTGGGGCTCCTGCTCCGCGACCTCCGCCGCGAGGGCCTGC TCGCCCCCGGCGCGCGCGCCGTCTTCCTCGGCGCCGCCGATGGAGACTGCCACCACCACC CTCCCGCCCTCGACGGCGACGACATGCGACGCATCACGCCGCGGGAGTTGCTGACGACGG GGGACCTGTCCGTCGACTTCGTGCTGGATTTCGGCTACTTCGACAAGGACGGCGACAGGG TTGGCCTCGTCGACAGGGTGCTCAAGGATGGCGGCATCTTTGCCGCCCCAATTGGCTCGG CGAGCGAGTTCCGCTTGCCGCCGAACTACCGCGTGGTTTACATCCGTCGGTTCACCGAGA CTTTCGTCGGGATCAAGAAGATTGCCCGCGTCGGCGGCGACAATGGGATTGCCGGCGCCA GAACAGGGATGGCAGCGACGACTCCTGCTCTGAAGGAAGGAGTTCTTGCGTTTTCTGCTC AAACAGCTGACACTGCCCTCGCTGAACTCAAGAACTTCAGGAGGAAGCTCTTACTGCCTC ACATCACTGGAGCATCAGCGGCTCACGCGCATCAAGCGTGGCTAAAATTGCGTCATCGTC CAGTGATTGCAGTTGATTTCCCAGCAATGTGGAATGTGAATAAGCTGCAGCCAGCACATC CTCTCGTCCTTCAGGATAAGGCTGTTCATGGAGCGCAACAGCAGCAGCTCAACAGGAGCG TGAGACTGAACCCATCTACAGGATATTGAAACGAAGCCTGAATTGGAACAGGGAAAAAGC TCAACTGAAGAAGAGCATTCTTGTCCATTGCAAATCCAGGGGGGTGATGCTCTCTGCCTG CCAAAAGAAATGGTTGGTTTGCTTTTTTCTGAAGTTCTTTATTTAAGTTGTCTGTCGTGC GTGATGATTGAGTTTGATGGTGTGCTACTGCTTACCAGTATGTGTGTATGCTTCGTTCGA TAGTCTCCAATTTGTTGTTTTGTATTCAGTGGTGACTGGTGATCTACTGATCTCCAATTG CACTACTGTATGGTATCCGTTTGGAATGAGCATTGTTCGTCTTGATCAAAAAAAAAAAAA AAAAGA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)