Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 9743 cluster # 9743       Sequences # 6       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9743#0 length = 1937 sequences # 5  
consensus_9743#1 length = 1661 sequences # 1  

consensusID : consensus_9743#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1937
fasta sequence
                              [ACCTCAATGATTAATTCTGACCTTTCAATTTTCAGAACAATTTTGACAATCTTAGACACTACTGTTCTCTTAGCAAATTCACAAACTTCAGCAAGTTTTCATGGGAGGACCCTCCCTCTGCTATGCTTGTGCATGCCGCATGCTTCCACTTTGCTGCCCTCGCCTTGATCTCCTTGTCGTCAACCAGCTGCTCGACCTTGTTCTTGATCTCCTCCTTGGTGACAACCCCTCGCTCATCCGCCTGGAGCTTCACTCCAGTCCCCCACACATTGCATATGTAGCTCTGGTTGCAGTACTGGTCGGCGAAGTACGGCCAGCACAGAAACGGCACACCATGCCGGAGCCCTTCCATCGTCGAGTTCCACCCGCAGTGCGACACGAAGCATGCGATCGACGGGTGCGAGAGCACGCTCTGCTGGGGAGCCCAACCGACGATCATTCCCTTGCCGCTGACACGGTGCCTGAACTCCTCCAGCCAGCCTTCGCCGGCACCATTGGTGAAGTTTTGCCTGATCACCCACAGGAATGGCCGGCCAGAAAGCACTAGCCCATCGGCGAGCTCTTGGACCCGCGCCATGTCGAAGACGGTGAAGCTCCCAAACGCCACGTAGACGACGGAGCAGGCGTCCTGTTCGTCGAGCCATGCCAGGCAGGTCGTGTCCTCCGGCCAGAAATGGCCGGCTAACCTCGACGTCGCCGGCGCTTCGAGCGGTCCAACCGGCAGCACGTTGGGGACGAGGGCCAGCGCCCCCGGCTCGATGTCCTGGAACGTGTTGCAGATGATGACCTCGGCCGAGGATATTGTCGGGTTGGTCTTGAACACGTTCTGGATGACCATCCTGCGCCCGTCCGGCGTGCCGCTCAGGGTAACCCAGGGGAGCTCGACTGCTAGAACGGGCGGCATCGTGGGTCTCAATTGGATCATCTCGTTTCTCCTCACATTCCCTGAAATGATTATATGTTCTTGATCTCAATTAACCACATGAGTAATACAACAAACAACTCCAATACGACATTTGTAATTGTAAGAGGCAGAATTCATGATTTTGCATTTGCTGTTCATGGATGATTACTGATGTGTTCTTACCAATTTCGTCCAGGACGCCATCCTGGGTCAGCTTGGGGACTTGCAGCCTGTGCGCCACAACGGCGGCGGAGTAAGTCGAGAACAAGGCGACGTGGACACCCACCGTGGCGGCCAGCTCCGTCACCCAGGCCATGGACACATCGGCGATCACCCACCTGATCCCCTCCGATCTGATCATCTCCTCGATGCCGCCGAGCATGGCGGCCGGCAAGCCGTCACCCAGCTTGGCGATGTTGGCACGGTCACCGGCAGGGTCCATGCCGTCCGGGAAGGACACCATGTGGATCCCATCAGGGATCGCCCCCGTCTCGTTCGCCATGGCGTTGATGACGCGGTCGCGGTTGAAGTCGGTGTGCACGAATTCGACCTCGAAGCCGAGGCCGACGAGCCGGTGAGAGAGCTCCATCAGAGGCATGACATGGCCTTGCGCAGGGAAGGGAAGCACCATGACATGAGGCTGAGGACGAGGAGGAGGAGGAGCCGCCATGGATGCCAATGGAGCGTGCTAGTGTGTGACTTCACTGCAAGAACTTTTTGAGTTGGGTGTGATTTATACAAGAAAGTTGTCAGTTGCCATTCAGTCTATGTGGATCTGGATGTGCTTAGATGCCTAGAAAGGCGATACAGTCGGCGCTGTTGCATCGGATCGTGATGCATGCATCACCTTTTTTGTACTGCCTGTTGGACCTGTAGACATCTGCTTTCTTTTTTCTGGTACAGCTTGATGTTGAAAATGTGTTGTTTCGAGTGACAGCCAAATGGCCGTGTAGAATTGCCGGCTTCCCATCACATGGCTGCCAAAAAAAAAAAAAAACAGAGGCTACGAAGCTACTACTCCCAAAAAAAGGAA]

[+] EMBL AK105674             [ACCTCAATGATTAATTCTGACCTTTCAATTTTCAGAACAATTTTGACAATCTTAGACACTACTGTTCTCTTAGCAAATTCACAAACTTCAGCAAGTTTTCATGGGAGGACCCTCCCTCTGCTATGCTTGTGCATGCCGCATGCTTCCACTTTGCTGCCCTCGCCTTGATCTCCTTGTCGTCAACCAGCTGCTCGACCTTGTTCTTGATCTCCTCCTTGGTGACAACCCCTCGCTCATCCGCCTGGAGCTTCACTCCAGTCCCCCACACATTGCATATGTAGCTCTGGTTGCAGTACTGGTCGGCGAAGTACGGCCAGCACAGAAACGGCACACCATGCCGGAGCCCTTCCATCGTCGAGTTCCACCCGCAGTGCGACACGAAGCATGCGATCGACGGGTGCGAGAGCACGCTCTGCTGGGGAGCCCAACCGACGATCATTCCCTTGCCGCTGACACGGTGCCTGAACTCCTCCAGCCAGCCTTCGCCGGCACCATTGGTGAAGTTTTGCCTGATCACCCACAGGAATGGCCGGCCAGAAAGCACTAGCCCATCGGCGAGCTCTTGGACCCGCGCCATGTCGAAGACGGTGAAGCTCCCAAACGCCACGTAGACGACGGAGCAGGCGTCCTGTTCGTCGAGCCATGCCAGGCAGGTCGTGTCCTCCGGCCAGAAATGGCCGGCTAACCTCGACGTCGCCGGCGCTTCGAGCGGTCCAACCGGCAGCACGTTGGGGACGAGGGCCAGCGCCCCCGGCTCGATGTCCTGGAACGTGTTGCAGATGATGACCTCGGCCGAGGATATTGTCGGGTTGGTCTTGAACACGTTCTGGATGACCATCCTGCGCCCGTCCGGCGTGCCGCTCAGGGTAACCCAGGGGAGCTCGACTGCTAGAACGGGCGGCATCGTGGGTCTCAATTGGATCATCTCGTTTCTCCTCACATTCCCTGAAATGATTATATGTTCTTGATCTCAATTAACCACATGAGTAATACAACAAACAACTCCAATACGACATTTGTAATTGTAAGAGGCAGAATTCATGATTTTGCATTTGCTGTTCATGGATGATTACTGATGTGTTCTTACCAATTTCGTCCAGGACGCCATCCTGGGTCAGCTTGGGGACTTGCAGCCTGTGCGCCACAACGGCGGCGGAGTAAGTCGAGAACAAGGCGACGTGGACACCCACCGTGGCGGCCAGCTCCGTCACCCAGGCCATGGACACATCGGCGATCACCCACCTGATCCCCTCCGATCTGATCATCTCCTCGATGCCGCCGAGCATGGCGGCCGGCAAGCCGTCACCCAGCTTGGCGATGTTGGCACGGTCACCGGCAGGGTCCATGCCGTCCGGGAAGGACACCATGTGGATCCCATCAGGGATCGCCCCCGTCTCGTTCGCCATGGCGTTGATGACGCGGTCGCGGTTGAAGTCGGTGTGCACGAATTCGACCTCGAAGCCGAGGCCGGCGAGCCGGTGAGAGAGCTCCATCAGAGGCATGACATGGCCTTGCGCAGGGAAGGGAAGCACCATGACATGAGGCTGAGGACGAGGAGGAGGAGGAGCCGCCATGGATGCCAATGGAGCGTGCTAGTGTGTGACTTCACTGCAAGAACTTTTTGAGTTGGGTGTGATTTATACAAGAAAGTTGTCAGTTGCCATTCAGTCTATGTGGATCTGGATGTGCTTAGATGCCTAGAAAGGCGATACAGTCGGCGCTGTTGCATCGGATCGTGATGCATGCATCACCTTTTTTGTACTGCCTGTTGGACCTGTAGACATCTGCTTTCTTTTTTCTGGTACAGCTTGATGTTGAAAATGTGTTGTTTCG                                                                                                        ]
[-] EMBL CB628951             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                GTAAGAGGCAGAATTCATGATTTTGCATTTGCTGTTCATGGATGATTACTGATGTGTTCTTACCAATTTCGTCCAGGACGCCATCCTGGATCAGCTTGGGGACTTGCAGCCTGTGCGCCACAACGGCGGCGGAGTAAGTCGAGAACAAGGCGACGTGGACACCCACCGTGGCGGCCAGCTCCGTCACCCAGGCCATGGACACATCGGCGATCACCCACCTGATCCCCTCCGATCTGATCATCTCCTCGATGCCGCCGAGCATGGCGGCCGGCAAGCCGTCACCCAGCTTGGCGATGTTGGCACGGTCACCGGCAGGGTCCATGCCGTCCGGGAAGGACACCATGTGGATCCCATCAGGGATCGCCCCCGTCTCGTTCGCCATGGCGTTGATGACGCGGTCGCGGTTGAAGTCGGTGTGCACGAATTCGACCTCGAAGCCGAGGCCGACGAGCCGGTGAGAGAGCTCCATGAGAGGCATGACATGGCCTTGCGCAGGGAAGGGAAGCACCATGACATGAGGCTGAGGACGAGGAGGAGGAGGAGCCGCCATGGATGCCAATGGAGCGTGCTAGTGTGTGACTTCACTGCAAGAACTTTTTGAGTTGGGTGTGATTTATACAAGAAAGTTGTCAGTTGCCATTCAGTCTATGTGGATCTGGATGTGCTTAGATGCCTAGAAAGGCGATACAGTCGGCGCTGTTGCATCGGATCGTGATGCATGCATCACCTATTTTGTACTGCCTGTTGGACCTGTAGACATCTGCTTTCTT                                                                                                                                               ]
[-] EMBL CB665251             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TGGACACATCGGCGATCACCCACCTGATCCCCTCCGATCTGATCATCTCCTCGATGCCGCCGAGCATGGCGGCCGGCAAGCCGTCACCCAGCTTGGCGATGTTGGCACGGTCACCGGCAGGGTCCATGCCGTCCGGGAAGGACACCATGTGGATCCCATCAGGGATCGCCCCCGTCTCGTTCGCCATGGCGTTGATGACGCGGTCGCGGTTGAAGTCGGTGTGCACGAATTCGCCCTCGAAGCCGAGGCCGACGAGCCGGTGAGAGAGCTCCATCAGAGGCATGACATGGCCTTGCGCAGGGAAGGGAAGCACCATGCCATGAGGCTGAGGACGAGGAGGAGGAGGACCCGCCATGGATGCCAATGGAGCGTGTTAGTGTGTGACTTCACTGCAAGAACTTTTTGAGTTGGGTGTGATTTATACAAGAAAGTTGTCAGTTGCCATTCAGTCTATGTGGATCTGGATGTGCTTAGATGCCTAGAAAGGCGATACAGTCGGCGCTGTTGCATCGGATCGTGATGCATGCATCACCTTTTTTGTACTGCCTGTTGGACCTGTAGACATCTGCTTTCTTTTTTCTGGTACAGCTTGATGTTGAAAATGTGTTGTTTCGAGTGACAGCCAAATGGCCGTGTAGAATTGCCGGCTTCCCATCACATGGCTGCCAAAAAAAGAAAAAAACAGAGGCTACGAAGCTACTACTCCCAAAAAAAGGAA]
[-] EMBL CB663430             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       CACATCGGCGATCACCCACCTGATCCCCTCCGATCTGATCATCTCCTCGATGCCGCCGAGCATGGCGGCCGGCAAGCCGTCACCCAGCTTGGCGATGTTGGCACGGTCACCGGCAGGGTCCATGCCGTCCGGGAAGGACACCATGTGGATCCCATCAGGGATCGCCCCCGTCTCGTTCGCCATGGCGTTGATGACGCGGTCGCGGTTGAAGTCGGTGTGCACGAATTCGACCTCGAAGCCGAGGCCGACGAGCCGGTGAGAGAGCTCCATCAGAGGCATGACATGGCCTTGCGCAGGGAAGGGAAGCACCATGACATGAGGCTGAGGACGAGGAGGAGGAGGAGCCCCCATGGATGCCAATGGAGCGTGCTAGTGTGTGACTTCACTGCAAGAACTTTTTGAGTTGGGTGTGATTTATACAAGAAAGTTGTCAGTTGCCATTCAGTCTATGTGGATCTGGATGTGCTTAGATGCCTAGAAAGGCGATACAGTCGGCGCTGTTGCATCGGATCGTGATGCATGCATCCCCTTTTTTGTACTGCCTGTTGGACCTGTAGACATCTGCTTTCTTTTTTCTGGTACAGCTTGATGTTGAAAATGTGTTGTTTCGAGTGACAGCCAAATGGCCGTGTAGAATTGCCGGCTTCCCATCACATGGCTGCCAAAAAAAAAAAAAAACAGAGGCTACGAAGCT                    ]
[+] EMBL BI805469             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      GAA TCGGTGTGCACGAATTCGACCTCGAAGCCGAGNCCGACGAGCCGGTGAGAGAGCTCCATCAGAGGCATGACAT GCCTTGCGCAGGGAAGGGAAGCACCATGACATGAGGCTGAGGACGAGGAGGAGGAGGAGCCGCCATGGATGCCAATGGAGCGTGCTAGTGTGTGACTTCACTGCAAGAACTTTTTGAGTTGGGTGTGATTTATACAAGAAAGTTGTCAGTTGCCATTCAGTCTATGTGGATCTGGATGTGCTTAGATGCCTAGAAAGGCGATACAGTCGGCGCTGTTGCCTCGNCTCGTGATGCATGCATCACCCTTTTTGTACTGCCTGTTGGACCTGTAGACATCTGCTTTCTTTTTTCTGGTACAGCTTGATGTTGAAAATGTGTTGTTTCGAGTGACAGCCAAATGGCCGCGTAGNATTGCCGGCTTCCCATCACATGGCTGCCAAAAAAAAA                                          ]


>consensus_9743#0 ACCTCAATGATTAATTCTGACCTTTCAATTTTCAGAACAATTTTGACAATCTTAGACACT ACTGTTCTCTTAGCAAATTCACAAACTTCAGCAAGTTTTCATGGGAGGACCCTCCCTCTG CTATGCTTGTGCATGCCGCATGCTTCCACTTTGCTGCCCTCGCCTTGATCTCCTTGTCGT CAACCAGCTGCTCGACCTTGTTCTTGATCTCCTCCTTGGTGACAACCCCTCGCTCATCCG CCTGGAGCTTCACTCCAGTCCCCCACACATTGCATATGTAGCTCTGGTTGCAGTACTGGT CGGCGAAGTACGGCCAGCACAGAAACGGCACACCATGCCGGAGCCCTTCCATCGTCGAGT TCCACCCGCAGTGCGACACGAAGCATGCGATCGACGGGTGCGAGAGCACGCTCTGCTGGG GAGCCCAACCGACGATCATTCCCTTGCCGCTGACACGGTGCCTGAACTCCTCCAGCCAGC CTTCGCCGGCACCATTGGTGAAGTTTTGCCTGATCACCCACAGGAATGGCCGGCCAGAAA GCACTAGCCCATCGGCGAGCTCTTGGACCCGCGCCATGTCGAAGACGGTGAAGCTCCCAA ACGCCACGTAGACGACGGAGCAGGCGTCCTGTTCGTCGAGCCATGCCAGGCAGGTCGTGT CCTCCGGCCAGAAATGGCCGGCTAACCTCGACGTCGCCGGCGCTTCGAGCGGTCCAACCG GCAGCACGTTGGGGACGAGGGCCAGCGCCCCCGGCTCGATGTCCTGGAACGTGTTGCAGA TGATGACCTCGGCCGAGGATATTGTCGGGTTGGTCTTGAACACGTTCTGGATGACCATCC TGCGCCCGTCCGGCGTGCCGCTCAGGGTAACCCAGGGGAGCTCGACTGCTAGAACGGGCG GCATCGTGGGTCTCAATTGGATCATCTCGTTTCTCCTCACATTCCCTGAAATGATTATAT GTTCTTGATCTCAATTAACCACATGAGTAATACAACAAACAACTCCAATACGACATTTGT AATTGTAAGAGGCAGAATTCATGATTTTGCATTTGCTGTTCATGGATGATTACTGATGTG TTCTTACCAATTTCGTCCAGGACGCCATCCTGGGTCAGCTTGGGGACTTGCAGCCTGTGC GCCACAACGGCGGCGGAGTAAGTCGAGAACAAGGCGACGTGGACACCCACCGTGGCGGCC AGCTCCGTCACCCAGGCCATGGACACATCGGCGATCACCCACCTGATCCCCTCCGATCTG ATCATCTCCTCGATGCCGCCGAGCATGGCGGCCGGCAAGCCGTCACCCAGCTTGGCGATG TTGGCACGGTCACCGGCAGGGTCCATGCCGTCCGGGAAGGACACCATGTGGATCCCATCA GGGATCGCCCCCGTCTCGTTCGCCATGGCGTTGATGACGCGGTCGCGGTTGAAGTCGGTG TGCACGAATTCGACCTCGAAGCCGAGGCCGACGAGCCGGTGAGAGAGCTCCATCAGAGGC ATGACATGGCCTTGCGCAGGGAAGGGAAGCACCATGACATGAGGCTGAGGACGAGGAGGA GGAGGAGCCGCCATGGATGCCAATGGAGCGTGCTAGTGTGTGACTTCACTGCAAGAACTT TTTGAGTTGGGTGTGATTTATACAAGAAAGTTGTCAGTTGCCATTCAGTCTATGTGGATC TGGATGTGCTTAGATGCCTAGAAAGGCGATACAGTCGGCGCTGTTGCATCGGATCGTGAT GCATGCATCACCTTTTTTGTACTGCCTGTTGGACCTGTAGACATCTGCTTTCTTTTTTCT GGTACAGCTTGATGTTGAAAATGTGTTGTTTCGAGTGACAGCCAAATGGCCGTGTAGAAT TGCCGGCTTCCCATCACATGGCTGCCAAAAAAAAAAAAAAACAGAGGCTACGAAGCTACT ACTCCCAAAAAAAGGAA



consensusID : consensus_9743#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1661
fasta sequence
                              [AAAAACAGTATTTATCCGTTTGCAAATATAAGCATTTCTGGCTATACATTGCATAGCCTGAAATGCTTATATTTGAAAACAGAGGTAGTAGTTTTTATTATATTGCATTACATTTAGCAGTAGCACTGGTGATTCATCTATTACACTTTTCAGAAAAAAAAAAGAGAAGGTATACTTCCAGTCCCATGAATTTGCCAAAGCACCTCAATGATTAATTCTGACCTTTCAATTTTCAGAACAATTTTGACAATCTTAGACACTACTGTTCTCTTAGCAAATTCACAAACTTCAGCAAGTTTTCATGGGAGGACCCTCCCTCTGCTATGCTTGTGCATGCCGCATGCTTCCACTTTGCTGCCCTCGCCTTGATCTCCTTGTCGTCAACCAGCTGCTCGACCTTGTTCTTGATCTCCTCCTTGGTGACAACCCCTCGCTCATCCGCCTGGAGCTTCACTCCAGTCCCCCACACATTGCATATGTAGCTCTGGTTGCAGTACTGGTCGGCGAAGTACGGCCAGCACAGAAACGGCACACCATGCCGGAGCCCTTCCATCGTCGAGTTCCACCCGCAGTGCGACACGAAGCATGCGATCGACGGGTGCGAGAGCACGCTCTGCTGGGGAGCCCAACCGACGATCATTCCCTTGCCGCTGACACGGTGCCTGAACTCCTCCAGCCAGCCTTCGCCGGCACCATTGGTGAAGTTTTGCCTGATCACCCACAGGAATGGCCGGCCAGAAAGCACTAGCCCATCGGCGAGCTCTTGGACCCGCGCCATGTCGAAGACGGTGAAGCTCCCAAACGCCACGTAGACGACGGAGCAGGCGTCCTGTTCGTCGAGCCATGCCAGGCAGGTCGTGTCCTCCGGCCAGAAATGGCCGGCTAACCTCGACGTCGCCGGCGCTTCGAGCGGTCCAACCGGCAGCACGTTGGGGACGAGGGCCAGCGCCCCCGGCTCGATGTCCTGGAACGTGTTGCAGATGATGACCTCGGCCGAGGATATTGTCGGGTTGGTCTTGAACACGTTCTGGATGACCATCCTGCGCCCGTCCGGCGTGCCGCTCAGGGTAACCCAGGGGAGCTCGACTGCTAGAACGGGCGGCATCGTGGGTCTCAATTGGATCATCTCGTTTCTCCTCACATTCCCAATTTCGTCCAGGACGCCATCCTGGATCAGCTTGGGGACTTGCAGCCTGTGCGCCACAACGGCGGCGGAGTAAGTCGAGAACAAGGCGACGTGGACACCCACCGTGGCGGCCAGCTCCGTCACCCAGGCCATGGACACATCGGCGATCACCCACCTGATCCCCTCCGATCTGATCATCTCCTCGATGCCGCCGAGCATGGCGGCCGGCAAGCCGTCACCCAGCTTGGCGATGTTGGCACGGTCACCGGCAGGGTCCATGCCGTCCGGGAAGGACACCATGTGGATCCCATCAGGGATCGCCCCCGTCTCGTTCGCCATGGCGTTGATGACGCGGTCGCGGTTGAAGTCGGTGTGCACGAATTCGACCTCGAAGCCGAGGCCGACGAGCCGGTGAGAGAGCTCCATCAGAGGCATGACATGGCCTTGCGCAGGGAAGGGAAGCACCATGACATGAGGCTGAGGACGAGGAGGAGGAGGAGCCGCCATGGATGCCAATGGAGCGTGCTAGTGTGTG]

[-] EMBL AK069049             [AAAAACAGTATTTATCCGTTTGCAAATATAAGCATTTCTGGCTATACATTGCATAGCCTGAAATGCTTATATTTGAAAACAGAGGTAGTAGTTTTTATTATATTGCATTACATTTAGCAGTAGCACTGGTGATTCATCTATTACACTTTTCAGAAAAAAAAAAGAGAAGGTATACTTCCAGTCCCATGAATTTGCCAAAGCACCTCAATGATTAATTCTGACCTTTCAATTTTCAGAACAATTTTGACAATCTTAGACACTACTGTTCTCTTAGCAAATTCACAAACTTCAGCAAGTTTTCATGGGAGGACCCTCCCTCTGCTATGCTTGTGCATGCCGCATGCTTCCACTTTGCTGCCCTCGCCTTGATCTCCTTGTCGTCAACCAGCTGCTCGACCTTGTTCTTGATCTCCTCCTTGGTGACAACCCCTCGCTCATCCGCCTGGAGCTTCACTCCAGTCCCCCACACATTGCATATGTAGCTCTGGTTGCAGTACTGGTCGGCGAAGTACGGCCAGCACAGAAACGGCACACCATGCCGGAGCCCTTCCATCGTCGAGTTCCACCCGCAGTGCGACACGAAGCATGCGATCGACGGGTGCGAGAGCACGCTCTGCTGGGGAGCCCAACCGACGATCATTCCCTTGCCGCTGACACGGTGCCTGAACTCCTCCAGCCAGCCTTCGCCGGCACCATTGGTGAAGTTTTGCCTGATCACCCACAGGAATGGCCGGCCAGAAAGCACTAGCCCATCGGCGAGCTCTTGGACCCGCGCCATGTCGAAGACGGTGAAGCTCCCAAACGCCACGTAGACGACGGAGCAGGCGTCCTGTTCGTCGAGCCATGCCAGGCAGGTCGTGTCCTCCGGCCAGAAATGGCCGGCTAACCTCGACGTCGCCGGCGCTTCGAGCGGTCCAACCGGCAGCACGTTGGGGACGAGGGCCAGCGCCCCCGGCTCGATGTCCTGGAACGTGTTGCAGATGATGACCTCGGCCGAGGATATTGTCGGGTTGGTCTTGAACACGTTCTGGATGACCATCCTGCGCCCGTCCGGCGTGCCGCTCAGGGTAACCCAGGGGAGCTCGACTGCTAGAACGGGCGGCATCGTGGGTCTCAATTGGATCATCTCGTTTCTCCTCACATTCCCAATTTCGTCCAGGACGCCATCCTGGATCAGCTTGGGGACTTGCAGCCTGTGCGCCACAACGGCGGCGGAGTAAGTCGAGAACAAGGCGACGTGGACACCCACCGTGGCGGCCAGCTCCGTCACCCAGGCCATGGACACATCGGCGATCACCCACCTGATCCCCTCCGATCTGATCATCTCCTCGATGCCGCCGAGCATGGCGGCCGGCAAGCCGTCACCCAGCTTGGCGATGTTGGCACGGTCACCGGCAGGGTCCATGCCGTCCGGGAAGGACACCATGTGGATCCCATCAGGGATCGCCCCCGTCTCGTTCGCCATGGCGTTGATGACGCGGTCGCGGTTGAAGTCGGTGTGCACGAATTCGACCTCGAAGCCGAGGCCGACGAGCCGGTGAGAGAGCTCCATCAGAGGCATGACATGGCCTTGCGCAGGGAAGGGAAGCACCATGACATGAGGCTGAGGACGAGGAGGAGGAGGAGCCGCCATGGATGCCAATGGAGCGTGCTAGTGTGTG]


>consensus_9743#1 AAAAACAGTATTTATCCGTTTGCAAATATAAGCATTTCTGGCTATACATTGCATAGCCTG AAATGCTTATATTTGAAAACAGAGGTAGTAGTTTTTATTATATTGCATTACATTTAGCAG TAGCACTGGTGATTCATCTATTACACTTTTCAGAAAAAAAAAAGAGAAGGTATACTTCCA GTCCCATGAATTTGCCAAAGCACCTCAATGATTAATTCTGACCTTTCAATTTTCAGAACA ATTTTGACAATCTTAGACACTACTGTTCTCTTAGCAAATTCACAAACTTCAGCAAGTTTT CATGGGAGGACCCTCCCTCTGCTATGCTTGTGCATGCCGCATGCTTCCACTTTGCTGCCC TCGCCTTGATCTCCTTGTCGTCAACCAGCTGCTCGACCTTGTTCTTGATCTCCTCCTTGG TGACAACCCCTCGCTCATCCGCCTGGAGCTTCACTCCAGTCCCCCACACATTGCATATGT AGCTCTGGTTGCAGTACTGGTCGGCGAAGTACGGCCAGCACAGAAACGGCACACCATGCC GGAGCCCTTCCATCGTCGAGTTCCACCCGCAGTGCGACACGAAGCATGCGATCGACGGGT GCGAGAGCACGCTCTGCTGGGGAGCCCAACCGACGATCATTCCCTTGCCGCTGACACGGT GCCTGAACTCCTCCAGCCAGCCTTCGCCGGCACCATTGGTGAAGTTTTGCCTGATCACCC ACAGGAATGGCCGGCCAGAAAGCACTAGCCCATCGGCGAGCTCTTGGACCCGCGCCATGT CGAAGACGGTGAAGCTCCCAAACGCCACGTAGACGACGGAGCAGGCGTCCTGTTCGTCGA GCCATGCCAGGCAGGTCGTGTCCTCCGGCCAGAAATGGCCGGCTAACCTCGACGTCGCCG GCGCTTCGAGCGGTCCAACCGGCAGCACGTTGGGGACGAGGGCCAGCGCCCCCGGCTCGA TGTCCTGGAACGTGTTGCAGATGATGACCTCGGCCGAGGATATTGTCGGGTTGGTCTTGA ACACGTTCTGGATGACCATCCTGCGCCCGTCCGGCGTGCCGCTCAGGGTAACCCAGGGGA GCTCGACTGCTAGAACGGGCGGCATCGTGGGTCTCAATTGGATCATCTCGTTTCTCCTCA CATTCCCAATTTCGTCCAGGACGCCATCCTGGATCAGCTTGGGGACTTGCAGCCTGTGCG CCACAACGGCGGCGGAGTAAGTCGAGAACAAGGCGACGTGGACACCCACCGTGGCGGCCA GCTCCGTCACCCAGGCCATGGACACATCGGCGATCACCCACCTGATCCCCTCCGATCTGA TCATCTCCTCGATGCCGCCGAGCATGGCGGCCGGCAAGCCGTCACCCAGCTTGGCGATGT TGGCACGGTCACCGGCAGGGTCCATGCCGTCCGGGAAGGACACCATGTGGATCCCATCAG GGATCGCCCCCGTCTCGTTCGCCATGGCGTTGATGACGCGGTCGCGGTTGAAGTCGGTGT GCACGAATTCGACCTCGAAGCCGAGGCCGACGAGCCGGTGAGAGAGCTCCATCAGAGGCA TGACATGGCCTTGCGCAGGGAAGGGAAGCACCATGACATGAGGCTGAGGACGAGGAGGAG GAGGAGCCGCCATGGATGCCAATGGAGCGTGCTAGTGTGTG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9743#0      ------------------------------------------------------------
consensus_9743#1      AAAAACAGTATTTATCCGTTTGCAAATATAAGCATTTCTGGCTATACATTGCATAGCCTG 60
                                                                                  

consensus_9743#0      ------------------------------------------------------------
consensus_9743#1      AAATGCTTATATTTGAAAACAGAGGTAGTAGTTTTTATTATATTGCATTACATTTAGCAG 120
                                                                                  

consensus_9743#0      ------------------------------------------------------------
consensus_9743#1      TAGCACTGGTGATTCATCTATTACACTTTTCAGAAAAAAAAAAGAGAAGGTATACTTCCA 180
                                                                                  

consensus_9743#0      ---------------------ACCTCAATGATTAATTCTGACCTTTCAATTTTCAGAACA 39
consensus_9743#1      GTCCCATGAATTTGCCAAAGCACCTCAATGATTAATTCTGACCTTTCAATTTTCAGAACA 240
                                           ***************************************

consensus_9743#0      ATTTTGACAATCTTAGACACTACTGTTCTCTTAGCAAATTCACAAACTTCAGCAAGTTTT 99
consensus_9743#1      ATTTTGACAATCTTAGACACTACTGTTCTCTTAGCAAATTCACAAACTTCAGCAAGTTTT 300
                      ************************************************************

consensus_9743#0      CATGGGAGGACCCTCCCTCTGCTATGCTTGTGCATGCCGCATGCTTCCACTTTGCTGCCC 159
consensus_9743#1      CATGGGAGGACCCTCCCTCTGCTATGCTTGTGCATGCCGCATGCTTCCACTTTGCTGCCC 360
                      ************************************************************

consensus_9743#0      TCGCCTTGATCTCCTTGTCGTCAACCAGCTGCTCGACCTTGTTCTTGATCTCCTCCTTGG 219
consensus_9743#1      TCGCCTTGATCTCCTTGTCGTCAACCAGCTGCTCGACCTTGTTCTTGATCTCCTCCTTGG 420
                      ************************************************************

consensus_9743#0      TGACAACCCCTCGCTCATCCGCCTGGAGCTTCACTCCAGTCCCCCACACATTGCATATGT 279
consensus_9743#1      TGACAACCCCTCGCTCATCCGCCTGGAGCTTCACTCCAGTCCCCCACACATTGCATATGT 480
                      ************************************************************

consensus_9743#0      AGCTCTGGTTGCAGTACTGGTCGGCGAAGTACGGCCAGCACAGAAACGGCACACCATGCC 339
consensus_9743#1      AGCTCTGGTTGCAGTACTGGTCGGCGAAGTACGGCCAGCACAGAAACGGCACACCATGCC 540
                      ************************************************************

consensus_9743#0      GGAGCCCTTCCATCGTCGAGTTCCACCCGCAGTGCGACACGAAGCATGCGATCGACGGGT 399
consensus_9743#1      GGAGCCCTTCCATCGTCGAGTTCCACCCGCAGTGCGACACGAAGCATGCGATCGACGGGT 600
                      ************************************************************

consensus_9743#0      GCGAGAGCACGCTCTGCTGGGGAGCCCAACCGACGATCATTCCCTTGCCGCTGACACGGT 459
consensus_9743#1      GCGAGAGCACGCTCTGCTGGGGAGCCCAACCGACGATCATTCCCTTGCCGCTGACACGGT 660
                      ************************************************************

consensus_9743#0      GCCTGAACTCCTCCAGCCAGCCTTCGCCGGCACCATTGGTGAAGTTTTGCCTGATCACCC 519
consensus_9743#1      GCCTGAACTCCTCCAGCCAGCCTTCGCCGGCACCATTGGTGAAGTTTTGCCTGATCACCC 720
                      ************************************************************

consensus_9743#0      ACAGGAATGGCCGGCCAGAAAGCACTAGCCCATCGGCGAGCTCTTGGACCCGCGCCATGT 579
consensus_9743#1      ACAGGAATGGCCGGCCAGAAAGCACTAGCCCATCGGCGAGCTCTTGGACCCGCGCCATGT 780
                      ************************************************************

consensus_9743#0      CGAAGACGGTGAAGCTCCCAAACGCCACGTAGACGACGGAGCAGGCGTCCTGTTCGTCGA 639
consensus_9743#1      CGAAGACGGTGAAGCTCCCAAACGCCACGTAGACGACGGAGCAGGCGTCCTGTTCGTCGA 840
                      ************************************************************

consensus_9743#0      GCCATGCCAGGCAGGTCGTGTCCTCCGGCCAGAAATGGCCGGCTAACCTCGACGTCGCCG 699
consensus_9743#1      GCCATGCCAGGCAGGTCGTGTCCTCCGGCCAGAAATGGCCGGCTAACCTCGACGTCGCCG 900
                      ************************************************************

consensus_9743#0      GCGCTTCGAGCGGTCCAACCGGCAGCACGTTGGGGACGAGGGCCAGCGCCCCCGGCTCGA 759
consensus_9743#1      GCGCTTCGAGCGGTCCAACCGGCAGCACGTTGGGGACGAGGGCCAGCGCCCCCGGCTCGA 960
                      ************************************************************

consensus_9743#0      TGTCCTGGAACGTGTTGCAGATGATGACCTCGGCCGAGGATATTGTCGGGTTGGTCTTGA 819
consensus_9743#1      TGTCCTGGAACGTGTTGCAGATGATGACCTCGGCCGAGGATATTGTCGGGTTGGTCTTGA 1020
                      ************************************************************

consensus_9743#0      ACACGTTCTGGATGACCATCCTGCGCCCGTCCGGCGTGCCGCTCAGGGTAACCCAGGGGA 879
consensus_9743#1      ACACGTTCTGGATGACCATCCTGCGCCCGTCCGGCGTGCCGCTCAGGGTAACCCAGGGGA 1080
                      ************************************************************

consensus_9743#0      GCTCGACTGCTAGAACGGGCGGCATCGTGGGTCTCAATTGGATCATCTCGTTTCTCCTCA 939
consensus_9743#1      GCTCGACTGCTAGAACGGGCGGCATCGTGGGTCTCAATTGGATCATCTCGTTTCTCCTCA 1140
                      ************************************************************

consensus_9743#0      CATTCCCTGAAATGATTATATGTTCTTGATCTCAATTAACCACATGAGTAATACAACAAA 999
consensus_9743#1      CATTCCC----------------------------------------------------- 1147
                      *******                                                     

consensus_9743#0      CAACTCCAATACGACATTTGTAATTGTAAGAGGCAGAATTCATGATTTTGCATTTGCTGT 1059
consensus_9743#1      ------------------------------------------------------------
                                                                                  

consensus_9743#0      TCATGGATGATTACTGATGTGTTCTTACCAATTTCGTCCAGGACGCCATCCTGGGTCAGC 1119
consensus_9743#1      -----------------------------AATTTCGTCCAGGACGCCATCCTGGATCAGC 1178
                                                   ************************* *****

consensus_9743#0      TTGGGGACTTGCAGCCTGTGCGCCACAACGGCGGCGGAGTAAGTCGAGAACAAGGCGACG 1179
consensus_9743#1      TTGGGGACTTGCAGCCTGTGCGCCACAACGGCGGCGGAGTAAGTCGAGAACAAGGCGACG 1238
                      ************************************************************

consensus_9743#0      TGGACACCCACCGTGGCGGCCAGCTCCGTCACCCAGGCCATGGACACATCGGCGATCACC 1239
consensus_9743#1      TGGACACCCACCGTGGCGGCCAGCTCCGTCACCCAGGCCATGGACACATCGGCGATCACC 1298
                      ************************************************************

consensus_9743#0      CACCTGATCCCCTCCGATCTGATCATCTCCTCGATGCCGCCGAGCATGGCGGCCGGCAAG 1299
consensus_9743#1      CACCTGATCCCCTCCGATCTGATCATCTCCTCGATGCCGCCGAGCATGGCGGCCGGCAAG 1358
                      ************************************************************

consensus_9743#0      CCGTCACCCAGCTTGGCGATGTTGGCACGGTCACCGGCAGGGTCCATGCCGTCCGGGAAG 1359
consensus_9743#1      CCGTCACCCAGCTTGGCGATGTTGGCACGGTCACCGGCAGGGTCCATGCCGTCCGGGAAG 1418
                      ************************************************************

consensus_9743#0      GACACCATGTGGATCCCATCAGGGATCGCCCCCGTCTCGTTCGCCATGGCGTTGATGACG 1419
consensus_9743#1      GACACCATGTGGATCCCATCAGGGATCGCCCCCGTCTCGTTCGCCATGGCGTTGATGACG 1478
                      ************************************************************

consensus_9743#0      CGGTCGCGGTTGAAGTCGGTGTGCACGAATTCGACCTCGAAGCCGAGGCCGACGAGCCGG 1479
consensus_9743#1      CGGTCGCGGTTGAAGTCGGTGTGCACGAATTCGACCTCGAAGCCGAGGCCGACGAGCCGG 1538
                      ************************************************************

consensus_9743#0      TGAGAGAGCTCCATCAGAGGCATGACATGGCCTTGCGCAGGGAAGGGAAGCACCATGACA 1539
consensus_9743#1      TGAGAGAGCTCCATCAGAGGCATGACATGGCCTTGCGCAGGGAAGGGAAGCACCATGACA 1598
                      ************************************************************

consensus_9743#0      TGAGGCTGAGGACGAGGAGGAGGAGGAGCCGCCATGGATGCCAATGGAGCGTGCTAGTGT 1599
consensus_9743#1      TGAGGCTGAGGACGAGGAGGAGGAGGAGCCGCCATGGATGCCAATGGAGCGTGCTAGTGT 1658
                      ************************************************************

consensus_9743#0      GTGACTTCACTGCAAGAACTTTTTGAGTTGGGTGTGATTTATACAAGAAAGTTGTCAGTT 1659
consensus_9743#1      GTG--------------------------------------------------------- 1661
                      ***                                                         

consensus_9743#0      GCCATTCAGTCTATGTGGATCTGGATGTGCTTAGATGCCTAGAAAGGCGATACAGTCGGC 1719
consensus_9743#1      ------------------------------------------------------------
                                                                                  

consensus_9743#0      GCTGTTGCATCGGATCGTGATGCATGCATCACCTTTTTTGTACTGCCTGTTGGACCTGTA 1779
consensus_9743#1      ------------------------------------------------------------
                                                                                  

consensus_9743#0      GACATCTGCTTTCTTTTTTCTGGTACAGCTTGATGTTGAAAATGTGTTGTTTCGAGTGAC 1839
consensus_9743#1      ------------------------------------------------------------
                                                                                  

consensus_9743#0      AGCCAAATGGCCGTGTAGAATTGCCGGCTTCCCATCACATGGCTGCCAAAAAAAAAAAAA 1899
consensus_9743#1      ------------------------------------------------------------
                                                                                  

consensus_9743#0      AACAGAGGCTACGAAGCTACTACTCCCAAAAAAAGGAA 1937
consensus_9743#1      --------------------------------------
                                                            




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)