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Oryza sativa
cluster # 9764 cluster # 9764       Sequences # 6       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9764#0 length = 1636 sequences # 6  

consensusID : consensus_9764#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1636
fasta sequence
                              [AGTCCACTCCTCGCCTTCGTTTCTCCTCCCCCATTTCGTCCCTACCTGCTCCTCACCAGATCCTTCCGCCGCCGCCGCCGCCATGTGGAGGGGCGGAGCGACCGCCGCCTCCGCCGCGAGGGCTCTCCGCTCGCGCCTGATCCCCGACACGTCCCACCACCCGGCCACGGCTCTAGCTCCCATCGCATCGCCGCGCTCCTCCTCCTCCTCCTCCTCCTCGTCTGCCCCCACCATCGCCGCCGCTGTGCCCGCCGTCGCGGAGGCTACGGCGGCCGCGGCCGCTGTTTCGAGGCAAGCTGGATCCGTCTCCGACGCGCTGAGGCACTACGGGAGGTGCTACTTCGAGCTCTCCAAAGCCCGCCTAAGTGCCCTTGTTGTGGCAACATCTGGGGCTGGTTATGTGCTCGGAAGTGGCAACATGGTAGACATAGCTGGACTTTGTTGCACCTGCGCTGGTACCATGATGGTTGCAGCATCTGCAAATACTCTCAACCAGGTGTTTGAGATAAAGAATGACGCTAAAATGAAAAGAACCATGCGACGGCCCCTACCATCAGGGCGCATTAGTCCTGCACATGCTGCCATGTGGGCTACTAGTGTTGGAGTTGCTGGAACAGCTTTGTTGGCTTGGAAGGCTAATGGCTTGGCGGCTGGGCTCGCAGCTTCTAATCTTATTCTGTATGCATTTGTATACACACCATTGAAGCAAATACACCCTGTAAATACATGGGTTGGAGCAGTTGTTGGTGCCATACCACCACTTCTAGGGTGGGCAGCAGCTTCGTCTGAACTGTCACTGAATGCTATGATTCTCCCTGCTGCATTGTACTATTGGCAAATACCACATTTTATGGCCCTTGCATACTTATGTCGGAATGATTACCTTGCTGGAGGGTACCGAATGTTTTCTTTTGCTGATCCTACTGGTAAAAGAACTGCATGGGTATCACTCAGAAATTGTCTATACATGCTGCCCTTGGGATTTTTTGCATACAACTGGGGTCTCACATCTGAGTGGTTCAGTCTTGAAGCATCACTTCTAACTTTGGGCCTTACAATTGGAGCTCTATCATTTGTGCTGGAGCCAACCCCCAAAACTGCAAGGAGAATGTTCTATGGTAGCCTTTTGTATCTTCCTGCTTTTATGGCTGGACTTCTGTTGCATCGGCTGCCTAATGAGCAAAAGGAGCATAATGTCACTCAGACGAGTGAAATCACCGGAATTCTTTATGGTGCTGAACAGCAGGATGAAGAACGAGCTAGACAGAAGCGTGAGGACCGAAAACCTTCTCGTATTCACTCGCGCCCTCCGGTTGCCTATGCTTCTGTGGCCCCTTTTCCTTTCTTACCAGTACCTATATATGTCTCTACCCAAGGTCATGAGCTATGAAAGATATTACATGGACTAGGCTTGTGGACGCAATGTTGGTCCATATTTTTTTGGCTTCCAAAGGAAATTTTCCTGATCAAGTACTTTGTCCTTGATGTTGATATGATTCGAAAATAATGAA-CAAGAAATTTAGCTCTTGGGCTCACCTGACTGTAAAAATTGATGTCCATTTACATTTGATGTCTTGAGTAACATGAATGCACATACTTTCAGAAATAATCTGCATATTTTCAAACTTTGTTTGCT]

[+] EMBL AK061861             [AGTCCACTCCTCGCCTTCGTTTCTCCTCCCCCATTTCGTCCCTACCTGCTCCTCACCAGATCCTTCCGCCGCCGCCGCCGCCATGTGGAGGGGCGGAGCGACCGCCGCCTCCGCCGCGAGGGCTCTCCGCTCGCGCCTGATCCCCGACACGTCCCACCACCCGGCCACGGCTCTAGCTCCCATCGCATCGCCGCGCTCCTCCTCCTCCTCCTCCTCCTCGTCTGCCCCCACCATCGCCGCCGCTGTGCCCGCCGTCGCGGAGGCTACGGCGGCCGCGGCCGCTGTTTCGAGGCAAGCTGGATCCGTCTCCGACGCGCTGAGGCACTACGGGAGGTGCTACTTCGAGCTCTCCAAAGCCCGCCTAAGTGCCCTTGTTGTGGCAACATCTGGGGCTGGTTATGTGCTCGGAAGTGGCAACATGGTAGACATAGCTGGACTTTGTTGCACCTGCGCTGGTACCATGATGGTTGCAGCATCTGCAAATACTCTCAACCAGGTGTTTGAGATAAAGAATGACGCTAAAATGAAAAGAACCATGCGACGGCCCCTACCATCAGGGCGCATTAGTCCTGCACATGCTGCCATGTGGGCTACTAGTGTTGGAGTTGCTGGAACAGCTTTGTTGGCTTGGAAGGCTAATGGCTTGGCGGCTGGGCTCGCAGCTTCTAATCTTATTCTGTATGCATTTGTATACACACCATTGAAGCAAATACACCCTGTAAATACATGGGTTGGAGCAGTTGTTGGTGCCATACCACCACTTCTAGGGTGGGCAGCAGCTTCGTCTGAACTGTCACTGAATGCTATGATTCTCCCTGCTGCATTGTACTATTGGCAAATACCACATTTTATGGCCCTTGCATACTTATGTCGGAATGATTACCTTGCTGGAGGGTACCGAATGTTTTCTTTTGCTGATCCTACTGGTAAAAGAACTGCATGGGTATCACTCAGAAATTGTCTATACATGCTGCCCTTGGGATTTTTTGCATACAACTGGGGTCTCACATCTGAGTGGTTCAGTCTTGAAGCATCACTTCTAACTTTGGGCCTTACAATTGGAGCTCTATCATTTGTGCTGGAGCCAACCCCCAAAACTGCAAGGAGAATGTTCTATGGTAGCCTTTTGTATCTTCCTGCTTTTATGGCTGGACTTCTGTTGCATCGGCTGCCTAATGAGCAAAAGGAGCATAATGTCACTCAGACGAGTGAAATCACCGGAATTCTTTATGGTGCTGAACAGCAGGATGAAGAACGAGCTAGACAGAAGCGTGAGGACCGAAAACCTTCTCGTATTCACTCGCGCCCTCCGGTTGCCTATGCTTCTGTGGCCCCTTTTCCTTTCTTACCAGTACCTATATATGTCTCTACCCAAGGTCATGAGCTATGAAAGATATTACATGGACTAGGCTTGTGGACGCAATGTTGGTCCATATTTTTTTGGCTTCCAAAGGAAATTTTCCTGATCAAGTACTTTGTCCTTGATGTTGATATGATTCGAAAATAATGAA CAAGAAATTTAGCTCTTGGGCTCACCTGACTGTAAAAATTGATGTCCATTTACATTTGATGTCTTGAGTAACATGAATGCAC                                           ]
[+] EMBL AK099005             [                                        CCTACCTGCTCCTCACCAGATCCTTCCGCCGCCGCCGCCGCCATGTGGAGGGGCGGCGCGACCGCCGCCTCCGCCGCGAGGGCTCTCCGCTCGCGCCTGATCCCCGACACGTCCCACCACCCGGCCACGGCTCTAGCTCCCATCGCATCGCCGCGCTCCTCCTCCTCCTCCTCCTCCTCGTCTGCCCCCACCATCGCCGCCGCTGTGCCCGCCGTCGCGGAGGCTACGGCGGCCGCGGCCGCTGTTTCGAGGCAAGCTGGATCCGTCTCCGACGCGCTGAGGCACTACGGGAGGTGCTACTTCGAGCTCTCCAAAGCCCGCCTAAGTGCCCTTGTTGTGGCAACATCTGGGGCTGGTTATGTGCTCGGAAGTGGCAACATGGTAGACATAGCTGGACTTTGTTGCACCTGCGCTGGTACCATGATGGTTGCAGCATCTGCAAATACTCTCAACCAGGTGTTTGAGATAAAGAATGACGCTAAAATGAAAAGAACCATGCGACGGCCCCTACCATCAGGGCGCATTAGTCCTGCACATGCTGCCATGTGGGCTACTAGTGTTGGAGTTGCTGGAACAGCTTTGTTGGCTTGGAAGGCTAATGGCTTGGCGGCTGGGCTCGCAGCTTCTAATCTTATTCTGTATGCATTTGTATACACACCATTGAAGCAAATACACCCTGTAAATACATGGGTTGGAGCAGTTGTTGGTGCCATACCACCACTTCTAGGGTGGGCAGCAGCTTCGTCTGAACTGTCACTGAATGCTATGATTCTCCCTGCTGCATTGTACTATTGGCAAATACCACATTTTATGGCCCTTGCATACTTATGTCGGAATGATTACCTTGCTGGAGGGTACCGAATGTTTTCTTTTGCTGATCCTACTGGTAAAAGAACTGCATGGGTATCACTCAGAAATTGTCTATACATGCTGCCCTTGGGATTTTTTGCATACAACTGGGGTCTCACATCTGAGTGGTTCAGTCTTGAAGCATCACTTCTAACTTTGGGCCTTACAATTGGAGCTCTATCATTTGTGCTGGAGCCAACCCCCAAAACTGCAAGGAGAATGTTCTATGGTAGCCTTTTGTATCTTCCTGCTTTTATGGCTGGACTTCTGTTGCATCGGCTGCCTAATGAGCAAAAGGAGCATAATGTCACTCAGACGAGTGAAATCACCGGAATTCTTTATGGTGCTGAACAGCAGGATGAAGAACGAGCTAGACAGAAGCGTGAGGACCGAAAACCTTCTCGTATTCACTCGCGCCCTCCGGTTGCCTATGCTTCTGTGGCCCCTTTTCCTTTCTTACCAGTACCTATATATGTCTCTACCCAAGGTCATGAGCTATGAAAGATATTACATGGACTAGGCTTGTGGACGCAATGTTGGTCCATATTTTTTTGGCTTCCAAAGGAAATTTTCCTGATCAAGTACTTTGTCCTTGATGTTGATATGATTCGAAAATAATGAA CAAGAAATTTAGCTCTTGGGCTCACCTGACTGTAAAAATTGATGTCCATTTACATTTGATGTCTTGAGTAACATGAATGC                                             ]
[-] EMBL CB658975             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          CACATTTTATGGCCCTTGCATACTTATGTCGGAATGATTACCTTGCTGGAGGGTACCGAATGTTTTCTTTTGCTGATCCTACTGGTAAAAGAACTGCATGGGTATCACTCAGAAATTGTCTATACATGCTGCCCTTGGGATTTTTTGCATACAACTGGGGTCTCACATCTGAGTGGTTCAGTCTTGAAGCATCACTTCTAACTTTGGGCCTTACAATTGGAGCTCTATCATTTGTGCTGGAGCCAACCCCCAAAACTGCAAGGAGAATGTTCTATGGTAGCCTTTTGTATCTTCCTGCTTTTATGGCTGGACTTCTGTTGCATCGGCTGCCTAATGAGCAAAAGGAGCATAATGTCACTCAGACGAGTGAAATCACCGGAATTCTTTATGGTGCTGAACAGCAGGATGAAGAACGAGCTAGACAGAAGCGTGAGGACCGAAAACCTTCTCGTATTCACTCGCGCCCTCCGGTTGCCTATGCTTCTGTGGCCCCTTTTCCTTTCTTACCAGTACCTATATATGTCTCTACCCAAGGTCATGAGCTATGAAAGATATTACATGGACTAGGCTTGTGGACGCAATGTTGGTCCATATTTTTTTGGCTTCCAAAGGAAATTTTCCTGATCAAGTACTTTGTCCTTGATGTTGATATGATTCGAAAATAATGAA CAAGAAATTTAGCTCTTGGGCTCACCTGACTGTAAAAATTGATGTCCATTTACATTTGATGTCTTGAGTAACATGAATGCACATACTTTCAGAAATAATCTGCATATTTTCAAACTTTGTTTGCT]
[+] EMBL BQ906299             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ccgGTCACTCAGACGAGTGAAATCACCGGAATTCTTTATGGTGCTGAACAGCAGGATGAAGAACGAGCTAGACAGAAGCGTGAGGACCGAAAACCTTCTCGTATTCACTCGCGCCCTCCGGTTGCCTATGCTTCTGTGGCCCCTTTTCCTTTCTTACCAGTACCTATATATGTCTCTACCCAAGGTCATGAGCTATGAAAGATATTACATGAACTAGGCTTGTGGACGCAATGTTGGTCCATATTTTTTTGGCTTCCNAAGGAAATTTTCCTGATCAAGTACTTTGTCCTTGATGTTGATATGATTCGAAAATAATGAACCCAGAAATTTAGCTCTTGGGCTCAaaaaaaaaa                                                                                            ]
[+] EMBL BI812281             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ATATATGTCTCTACCCAAGGTCATGAGCTATGAAAGATATTACATGAACTAGGCTTGTGGACGCAATGTTGGTCCATATTTTTTTGGCTTCCAAAGGAAATTTTCCTGATCAAGTACTTTGTCCTTGATGTTGATATGATTCGAAAATAATGAA CAAGAAATTTAGCTCTTGGGCTCAaaaaaaaaa                                                                                            ]
[-] EMBL CA998178             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        TACCCAAGGTCATGAGCTATGAAAGATATTACATGGACTAGGCTTGTGGACGCAATGTGGGTCCATATTTTTTTGGCTTCCAAAGGAAATTTTCCTGATCAAGTACTTTGTCCTTGATGTTGATATGATTCGAAAATAATGAA CAAGAAATTTAGCTCTTGGGCTCACCTGACTGTAAAAATTGATGTC                                                                               ]


>consensus_9764#0 AGTCCACTCCTCGCCTTCGTTTCTCCTCCCCCATTTCGTCCCTACCTGCTCCTCACCAGA TCCTTCCGCCGCCGCCGCCGCCATGTGGAGGGGCGGAGCGACCGCCGCCTCCGCCGCGAG GGCTCTCCGCTCGCGCCTGATCCCCGACACGTCCCACCACCCGGCCACGGCTCTAGCTCC CATCGCATCGCCGCGCTCCTCCTCCTCCTCCTCCTCCTCGTCTGCCCCCACCATCGCCGC CGCTGTGCCCGCCGTCGCGGAGGCTACGGCGGCCGCGGCCGCTGTTTCGAGGCAAGCTGG ATCCGTCTCCGACGCGCTGAGGCACTACGGGAGGTGCTACTTCGAGCTCTCCAAAGCCCG CCTAAGTGCCCTTGTTGTGGCAACATCTGGGGCTGGTTATGTGCTCGGAAGTGGCAACAT GGTAGACATAGCTGGACTTTGTTGCACCTGCGCTGGTACCATGATGGTTGCAGCATCTGC AAATACTCTCAACCAGGTGTTTGAGATAAAGAATGACGCTAAAATGAAAAGAACCATGCG ACGGCCCCTACCATCAGGGCGCATTAGTCCTGCACATGCTGCCATGTGGGCTACTAGTGT TGGAGTTGCTGGAACAGCTTTGTTGGCTTGGAAGGCTAATGGCTTGGCGGCTGGGCTCGC AGCTTCTAATCTTATTCTGTATGCATTTGTATACACACCATTGAAGCAAATACACCCTGT AAATACATGGGTTGGAGCAGTTGTTGGTGCCATACCACCACTTCTAGGGTGGGCAGCAGC TTCGTCTGAACTGTCACTGAATGCTATGATTCTCCCTGCTGCATTGTACTATTGGCAAAT ACCACATTTTATGGCCCTTGCATACTTATGTCGGAATGATTACCTTGCTGGAGGGTACCG AATGTTTTCTTTTGCTGATCCTACTGGTAAAAGAACTGCATGGGTATCACTCAGAAATTG TCTATACATGCTGCCCTTGGGATTTTTTGCATACAACTGGGGTCTCACATCTGAGTGGTT CAGTCTTGAAGCATCACTTCTAACTTTGGGCCTTACAATTGGAGCTCTATCATTTGTGCT GGAGCCAACCCCCAAAACTGCAAGGAGAATGTTCTATGGTAGCCTTTTGTATCTTCCTGC TTTTATGGCTGGACTTCTGTTGCATCGGCTGCCTAATGAGCAAAAGGAGCATAATGTCAC TCAGACGAGTGAAATCACCGGAATTCTTTATGGTGCTGAACAGCAGGATGAAGAACGAGC TAGACAGAAGCGTGAGGACCGAAAACCTTCTCGTATTCACTCGCGCCCTCCGGTTGCCTA TGCTTCTGTGGCCCCTTTTCCTTTCTTACCAGTACCTATATATGTCTCTACCCAAGGTCA TGAGCTATGAAAGATATTACATGGACTAGGCTTGTGGACGCAATGTTGGTCCATATTTTT TTGGCTTCCAAAGGAAATTTTCCTGATCAAGTACTTTGTCCTTGATGTTGATATGATTCG AAAATAATGAACAAGAAATTTAGCTCTTGGGCTCACCTGACTGTAAAAATTGATGTCCAT TTACATTTGATGTCTTGAGTAACATGAATGCACATACTTTCAGAAATAATCTGCATATTT TCAAACTTTGTTTGCT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)