These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9765#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 4271 fasta sequence [ACCACCTCCTCTCCTCTCCTCTCCTCTCCTTCTTCCTCTTCCCCTGCACTGCACTGCCACTGCATTAATCCCCTTCACCGATTCCTCCTCTCCTCTCCTCCACCTCCACCTCCACCGCACGCACCAAACCGCAGTTTCTCTCTCTCTCCCTTTCGCTGTTCCTGTGTGCCTTGCTTAGCTGCCGCTTTCCTCTCTCCCTCCCTCTCTTTCTTTCTTCCTCTCTCTGCTCAACCTCACAAAAATTCCCCCCTTTTGCTCTTTCTCTTTCTTTCCTCCCCGATCGACTTCTTCTTCTTCTTCACCTTCTCCAGTTCTCCTCATCCGTCTTCGGCGATCTTTGCCGCTGTGAACATTTGACAGTTTACAGGTTCCTCCATTTCAGTTGTTGGATTAAGAAAGAGGCTTTATGCTTTATAAATAAGTAAGCATCATCATCAATATAAGTTGTGGCTGCTCTTAAAGATCCTCAGATTCTGTACAAGTTCAGAGCTTCCTCTGTTTGGCAGTGTCAGTACACGTGCTTGCATAGTTCATAACTGGGGTGGAGATATCTTAGTTTCATGTTCTTTGTGCTTCTTGGCTCTTACCCAGCTGGTTTAACATCTGATGGGCTGCTCACCTTCTAAGGTGTGTTCATGTCCACATTATAAGGGCAGTTTGTGCTTCTGTGACTGTGGATGCTTTGGACAAACACCTGACTCCCCAAGAGAGTCAAGGGGAAAATCAAACCGGGTTAGGGGAAAGACAGATTCTAGTGCTTCAGATGCTTCTTCTGATGACCTAGAGGAAGATGATGATGGATTGCACCAAATGAACATTACAAGGGACTCTAATGTTGGTATCAATCGACTCTCAAGGGTCTCATCACAATTTCTTCCACCAGAAGGTTCACGTAAAGTTCGAATCCCATTGGGGAATTATGACCTGAGATATTCCTACTTGTCTCAAAGAGGCTACTACCCAGAATCATTGGACAAGCCAAACCAAGACAGTTTTTGTATACATACTCCATTTGGAACAAGCCCTGATGACCATTTCTTTGGTGTATTTGATGGCCATGGAGAATATGGAGCTCAGTGCTCACAATTTGTAAAGCGAAGACTATGCGAAAACCTGCTCAGAGATGACCGGTTCCGTACTGATGTTGTTCAGGCTCTTCATTCTGCTTTCTTGGCAACAAATTCACAGCTTCATGCAGACAGCTTAGATGATTCTATGAGTGGTACTACTGCAGTCACTGTGCTGGTGAGGGGTAAAACTATTTACATTGCGAATACGGGTGATTCACGTGCTGTTATTGCCGAAAAAAAGAGGGGAAGATGTTGTTGCTGTTGACCTGTCCATAGATCAAACACACTACAGGACTGATGAGCTTGAAAGGGTCAAGGAGTGTGGTGCTAGGGTTATGACGTTGGATCAGATAGAGGGGCTAAAGAACCCAGATGTACAGTGTTGGGGCACCGAGGAAAGTGATGACGGTGATCCTCCAAGGTTGTGGGTGCAAAATGGCATGTATCCAGGAACTGCTTTTACTCGCAGCATTGGAGATTCTGTCGCTGAATCTATCGGTGTTGTCGCTAATCCTGAGATTTTTATCCTGGAGCTCAATGCCAACCATCCATTCTTTGTTCTTGCTAGTGATGGAGTTTTTGAGTTTCTTTCTAGTCAAACTGTTGTCGACATGATTGCTAAATACAAGGATCCTCGTGATGCGTGCGCTGCAATTGTTGCTGAATCCTATCGCCTCTGGCTACAGTATGAAACTCGTACAGATGACATTACAATAATAGTTGTTCATATTAACGGGTTAACTGATATGGAATGTACTCAAACTGTAATGAAAGTATCTTTGCAACCTTCCCAACAAGTCGTAGAATTGGTAGGCTCAGAATCACCATCGACAATAAGTTTGAATCCCAAGAACCAGCGTTCCAGGCAAGATCTATCACGTGCTCGGCTGAGAGCACTTGAAAGTTCCCTGGAAAATGGTCGACTATGGGTCCCTCCATCCCCATCGCATCGGAAGACATGGGAAGAGCAAGCACATATTGAGCGAATACTACACGACCATTTCCTCTTCAGGAAGCTCACTGACTCACAGTGCCATGTTTTACTTGATTGCATGCAAAGAGTTGAGGTGAAAGCTGGGGATATAGTGGTGCAGCAGGGCGGTGAAGGCGAGTGCTTCTATGTAGTTGGGAGTGGTGAGTTTGAAGTGCTAGCCATTCAGGAAGAAGATGGAAAGGAAGTTACAAAGGTTCTACATCGGTATACTGCTGACAAACTATCTTCTTTTGGGGAGCTAGCACTAATGTATAATAAACCACTTCAAGCTTCAGTCCGTGCTGTGACTACTGGAACTTTATGGGCTCTAAAGCGAGAGGATTTTCGGGGAATTCTGATGTCAGAGTTTTCAAATATACCATCATTAAAGTTGCTCCGATCAGTGGAGCTGTTTACGAGATTGACAATGCTTCAACTAAGTCAACTTGCTGATTCTCTTGTTGAAGTAACTTTTGGGGATGGTCAAATGATAGTAGACAAGAATGATGATGCATCTTCCTTGTATATTATTCAAAGAGGTCGTGTGAAACTTAAATTGGCTGCAGATCAGGTAAATTCAGATGCCTGGGATCTTCTTAGTTCTCAAACAGAGGTGGCCCAATCAAGTCGAGAAGATGGTAATTACGTGTTTGAGATAGATGAAGGGGGACACTTTGGAGAGTGGGCTCTCTTTGGGGAGACAATTGCTTTTACTGCTATGTCAGTTGGTGATGTGACTTGTTCTACTATTGCAAAGGAGAAGTTTGACTCAATTATTGGGCCCTTGCCAAAAGTTTCCCAGTCTGATTCCAAGCTCAAAGATTCCTTGGTTCCTAAAGGGCATGGTGCAGATGATAGTTCCTTCAGGAAGGCGCAGCTATCTGATTT-------GGAATGGAAAATGTGCATATATGCCGCTGATTGCAGTGAGATTGGTCTTGTCCAACTAAGAGGTTCTGACAAGATCAAAAGCTTAAAGAGGTTTTACATCAAGAGAGTAAAAGACCTTCATAAGGAAAAACACGTATTTGATGAGAAGGATCTCATGAAATCTTTGAGCCAATCAACTTGTGTGCCAGAAGTTCTATGTACTTGCGCTGATCAATCCTACCTAGGAATACTGCTGAATTGTTGCCTTTGTTGCTCACTGGCTTCAATACTTCATGCACCACTAAATGAGTCGTCTGCACGATTCTATGTAGCCTCTGTCGTCGTAGCGCTAGAAAATCTCCATCAGAGGTCCATTCTTTACAGAGGTGTTTCTGCAGACATTCTTATGGTCGACCGATCAGGGCATCTTCAACTAGTTGACTTCAGGTTTGCAAAGAAGTTGCAAGGTGAAAGGACTTACACAATATGTGGGATTGCCGACTCTCTAGCTCCAGAGATAGTTCTTGGTAGGGGCCATGGATTTTCTGCTGACTGGTGGGCGCTGGGAGTGTTGATTTATTTCATGCTGCAATCAGACATGCCATTTGGCTCTTGGAGGGAGAGTGAACTGGAACCTTTTGCAAAGATTGCCAAGGGTCACCTTGTCATGCCATCAACATTCAGCATCGAAGTTGTTGACCTTATTACAAAGCTACTCGAGGTAAACGAAAATGCGCGCCTTGGGGCCAAGGGAGCGGAATCTGTGAAAAGACACCCCTGGTTTGATGGCATTGACTGGAAACAAATAGCAGATGGTACTTATACAGTACCCCAAGAAATCACCGATCGTGTCGACAGCTATGTAGAAACTCTTACAGAGGACTTGACAGCATCCCCTTCCAT-GCCA-AGTGAAGAAACAGCTGATCAGGCTGCTCCAGAATGGATCCAGGATTGGTGATCTCA-GTTGCTGCATGAACAAAAAGATGTTTGGGAAAACTTGTTTAGCATTTCA-AATGAAAAAAAAAACGGGTACATACA-TGATTACA-GCATGTGAATTTTTGTCGAAATGGTGGATTATACGTAGCAACAATTCTGTATAGAGGAATCATCAGCTCAACCTGCAACCATCTGATGGATATGCTAGCAAAAATGTGAAAAATGGTGTTGCAGTAGTTCAAGCA-GGAGCCAGAACTGGTCTGCAGGGAGAACTAATGATTCCTGTGGTACATATGTATAGACCCTTCTTTCATTTGTAAATTTATTTGTAT-TATTCATCTGTAGGTGAAAATTATAACTGCCTACCTATGTAATTTTGTATAACATTTTGATAAGAAAACCGGGGCCATGTGTCAAAAAAAAAA] [+] EMBL AK068697 [ACCACCTCCTCTCCTCTCCTCTCCTCTCCTTCTTCCTCTTCCCCTGCACTGCACTGCCACTGCATTAATCCCCTTCACCGATTCCTCCTCTCCTCTCCTCCACCTCCACCTCCACCGCACGCACCAAACCGCAGTTTCTCTCTCTCTCCCTTTCGCTGTTCCTGTGTGCCTTGCTTAGCTGCCGCTTTCCTCTCTCCCTCCCTCTCTTTCTTTCTTCCTCTCTCTGCTCAACCTCACAAAAATTCCCCCCTTTTGCTCTTTCTCTTTCTTTCCTCCCCGATCGACTTCTTCTTCTTCTTCACCTTCTCCAGTTCTCCTCATCCGTCTTCGGCGATCTTTGCCGCTGTGAACATTTGACAGTTTACAGGTTCCTCCATTTCAGTTGTTGGATTAAGAAAGAGGCTTTATGCTTTATAAATAAGTAAGCATCATCATCAATATAAGTTGTGGCTGCTCTTAAAGATCCTCAGATTCTGTACAAGTTCAGAGCTTCCTCTGTTTGGCAGTGTCAGTACACGTGCTTGCATAGTTCATAACTGGGGTGGAGATATCTTAGTTTCATGTTCTTTGTGCTTCTTGGCTCTTACCCAGCTGGTTTAACATCTGATGGGCTGCTCACCTTCTAAGGTGTGTTCATGTCCACATTATAAGGGCAGTTTGTGCTTCTGTGACTGTGGATGCTTTGGACAAACACCTGACTCCCCAAGAGAGTCAAGGGGAAAATCAAACCGGGTTAGGGGAAAGACAGATTCTAGTGCTTCAGATGCTTCTTCTGATGACCTAGAGGAAGATGATGATGGATTGCACCAAATGAACATTACAAGGGACTCTAATGTTGGTATCAATCGACTCTCAAGGGTCTCATCACAATTTCTTCCACCAGAAGGTTCACGTAAAGTTCGAATCCCATTGGGGAATTATGACCTGAGATATTCCTACTTGTCTCAAAGAGGCTACTACCCAGAATCATTGGACAAGCCAAACCAAGACAGTTTTTGTATACATACTCCATTTGGAACAAGCCCTGATGACCATTTCTTTGGTGTATTTGATGGCCATGGAGAATATGGAGCTCAGTGCTCACAATTTGTAAAGCGAAGACTATGCGAAAACCTGCTCAGAGATGACCGGTTCCGTACTGATGTTGTTCAGGCTCTTCATTCTGCTTTCTTGGCAACAAATTCACAGCTTCATGCAGACAGCTTAGATGATTCTATGAGTGGTACTACTGCAGTCACTGTGCTGGTGAGGGGTAAAACTATTTACATTGCGAATACGGGTGATTCACGTGCTGTTATTGCCGAAAAAAAGAGGGGAAGATGTTGTTGCTGTTGACCTGTCCATAGATCAAACACACTACAGGACTGATGAGCTTGAAAGGGTCAAGGAGTGTGGTGCTAGGGTTATGACGTTGGATCAGATAGAGGGGCTAAAGAACCCAGATGTACAGTGTTGGGGCACCGAGGAAAGTGATGACGGTGATCCTCCAAGGTTGTGGGTGCAAAATGGCATGTATCCAGGAACTGCTTTTACTCGCAGCATTGGAGATTCTGTCGCTGAATCTATCGGTGTTGTCGCTAATCCTGAGATTTTTATCCTGGAGCTCAATGCCAACCATCCATTCTTTGTTCTTGCTAGTGATGGAGTTTTTGAGTTTCTTTCTAGTCAAACTGTTGTCGACATGATTGCTAAATACAAGGATCCTCGTGATGCGTGCGCTGCAATTGTTGCTGAATCCTATCGCCTCTGGCTACAGTATGAAACTCGTACAGATGACATTACAATAATAGTTGTTCATATTAACGGGTTAACTGATATGGAATGTACTCAAACTGTAATGAAAGTATCTTTGCAACCTTCCCAACAAGTCGTAGAATTGGTAGGCTCAGAATCACCATCGACAATAAGTTTGAATCCCAAGAACCAGCGTTCCAGGCAAGATCTATCACGTGCTCGGCTGAGAGCACTTGAAAGTTCCCTGGAAAATGGTCGACTATGGGTCCCTCCATCCCCATCGCATCGGAAGACATGGGAAGAGCAAGCACATATTGAGCGAATACTACACGACCATTTCCTCTTCAGGAAGCTCACTGACTCACAGTGCCATGTTTTACTTGATTGCATGCAAAGAGTTGAGGTGAAAGCTGGGGATATAGTGGTGCAGCAGGGCGGTGAAGGCGAGTGCTTCTATGTAGTTGGGAGTGGTGAGTTTGAAGTGCTAGCCATTCAGGAAGAAGATGGAAAGGAAGTTACAAAGGTTCTACATCGGTATACTGCTGACAAACTATCTTCTTTTGGGGAGCTAGCACTAATGTATAATAAACCACTTCAAGCTTCAGTCCGTGCTGTGACTACTGGAACTTTATGGGCTCTAAAGCGAGAGGATTTTCGGGGAATTCTGATGTCAGAGTTTTCAAATATACCATCATTAAAGTTGCTCCGATCAGTGGAGCTGTTTACGAGATTGACAATGCTTCAACTAAGTCAACTTGCTGATTCTCTTGTTGAAGTAACTTTTGGGGATGGTCAAATGATAGTAGACAAGAATGATGATGCATCTTCCTTGTATATTATTCAAAGAGGTCGTGTGAAACTTAAATTGGCTGCAGATCAGGTAAATTCAGATGCCTGGGATCTTCTTAGTTCTCAAACAGAGGTGGCCCAATCAAGTCGAGAAGATGGTAATTACGTGTTTGAGATAGATGAAGGGGGACACTTTGGAGAGTGGGCTCTCTTTGGGGAGACAATTGCTTTTACTGCTATGTCAGTTGGTGATGTGACTTGTTCTACTATTGCAAAGGAGAAGTTTGACTCAATTATTGGGCCCTTGCCAAAAGTTTCCCAGTCTGATTCCAAGCTCAAAGATTCCTTGGTTCCTAAAGGGCATGGTGCAGATGATAGTTCCTTCAGGAAGGCGCAGCTATCTGATTT GGAATGGAAAATGTGCATATATGCCGCTGATTGCAGTGAGATTGGTCTTGTCCAACTAAGAGGTTCTGACAAGATCAAAAGCTTAAAGAGGTTTTACATCAAGAGAGTAAAAGACCTTCATAAGGAAAAACACGTATTTGATGAGAAGGATCTCATGAAATCTTTGAGCCAATCAACTTGTGTGCCAGAAGTTCTATGTACTTGCGCTGATCAATCCTACCTAGGAATACTGCTGAATTGTTGCCTTTGTTGCTCACTGGCTTCAATACTTCATGCACCACTAAATGAGTCGTCTGCACGATTCTATGTAGCCTCTGTCGTCGTAGCGCTAGAAAATCTCCATCAGAGGTCCATTCTTTACAGAGGTGTTTCTGCAGACATTCTTATGGTCGACCGATCAGGGCATCTTCAACTAGTTGACTTCAGGTTTGCAAAGAAGTTGCAAGGTGAAAGGACTTACACAATATGTGGGATTGCCGACTCTCTAGCTCCAGAGATAGTTCTTGGTAGGGGCCATGGATTTTCTGCTGACTGGTGGGCGCTGGGAGTGTTGATTTATTTCATGCTGCAATCAGACATGCCATTTGGCTCTTGGAGGGAGAGTGAACTGGAACCTTTTGCAAAGATTGCCAAGGGTCACCTTGTCATGCCATCAACATTCAGCATCGAAGTTGTTGACCTTATTACAAAGCTACTCGAGGTAAACGAAAATGCGCGCCTTGGGGCCAAGGGAGCGGAATCTGTGAAAAGACACCCCTGGTTTGATGGCATTGACTGGAAACAAATAGCAGATGGTACTTATACAGTACCCCAAGAAATCACCGATCGTGTCGACAGCTATGTAGAAACTCTTACAGAGGACTTGACAGCATCCCCTTCCAT GCCA AGTGAAGAAACAGCTGATCAGGCTGCTCCAGAATGGATCCAGGATTGGTGATCTCA GTTGTTGCATGAACAAAAAGATGTTTGGGAAAACTTGTTTAGCATTTCA AATGAAAAAAAAAACGGGTACATACA TGATTACA GCATGTGAATTTTTGTCGAAATGGTGGATTATACGTAGCAACAATTCTGTATAGAGGAATCATCAGCTCAACCTGCAACCATCTGATGGATATGCTAGCAAAAATGTGAAAAATGGTGTTGCAGTAGTTCAAGCA GGAGCCAGAACTGGTCTGCAGGGAGAACTAATGATTCCTGTGGTACATATGTATAGACCCTTCTTTCATTTGTAAATTTATTTGTAT TATTCATCTGTAGGTGAAAATTATAACTGCCTACCTATGTAATTTTGTATA ] [+] EMBL CB662633 [ aGAAGGCGCACCTATCTGATTTGGTACGGGGAATGGAAAATGTGCATATATGCCGCTGATTGCATTGAGATTGGTCTTGTCCAACTAAGAGGTGCTGACAACATCAAAAGCTTAAAGAGGTTTTACATCAAGAGAGTAAAAGACCTTCATAAGGAAAAACACGTATTTGATGAGAAGGATCTCATGAAATCTTTGAGCCAATCAACTTGTGTGCCACAAGTTCTATGTACTTGCGCTGATCAATCCTACCTACGAATACTGCTGAATTGTTGCCTTTGTTGCTCACTGGCTTCAATACTTCATGCACCACTAAATGAGTCTTCTGCACGATTCTATGCAGCCTCTGTCGTCGTAGCGCTAGAAAATCTCCATCACAGGTCCATTCTTTACAGAGGTGTTTCTGCAGACATTCTTATGGTCGACCGATCAAGGCATCTTCAACTATTTGACTTCAAGTTTGCAAAGAATTTGCAATGTGAAAGGACTTACACCATATGTGGGATTGCCGACTCTCTAACTCCAGATATAGTTCTTGGTAGGGGCCATGGATTTTCTGCTGACTGGTGGGCGCTGGGAGTGTTGATTTATTTCATGCTGCAATCAGACATGCCATTTGGCTCTTGGAGGGAGAGTGAACTGGAACCTTTTGCAAAGATTGCCAAGGGTCACCTTGTCATGCCATCAACATTCAACATCGAAGTTGTTGACCTTATTACAAAGCTACTCGAGGTAAACGAg ] [-] EMBL CB662597 [ TGCAAGGTGAAAGGACTTACACAATATGTGGGATTGCCGACTCTCTAGCTCCAGAGATAGTTCTTGGTAGGGGCCATGGATTTTCTGCTGACTGGTGGGCGCTGGGAGTGTTGATTTATTTCATGCTGCAATCAGACATGCCATTTGGCTCTTGGAGGGAGAGTGAACTGGAACCTTTTGCAAAGATTGCCAAGGGTCACCTTGTCATGCCATCAACATTCAGCATNGAAGTTGTTGACCTTATTACAAAGCTACTCGAGGTAAACGAAAATGCGCGCCTTGGGGCCAAGGGAGCGGAATCTGTGAAAAGACACCCCTGGTTTGATGGCATTGACTGGAAACAAATAGCAGATGGTACTTATACAGTACCCCAAGAAATCACCGATCGTGTCGACAGCTATGTAGAAACTCTTACAGAGGACTTGACAGCATCCCCTTCCAT GCCA AGTGAAGAAACAGCTGATCAGGCTGCTCCAGAATGGATCCAGGATTGGTGATCTCA GTTGCTGCATGAACAAAAAGATGTTTGGGAAAACTTGTTTAGCATTTCA AATGAAAAAAAAAACGGGTACATACA TGATTACA GCATGTGAATTTTTGTCGAAATGGTGGATTATACGTAGCAACAATTCTGTATAGAGGAATCATCAGCTCAACCTGCAACCATCTGATGGATATGCTAGCAAAAATGTGAAAAATGGTGTTGCAGTAGTTCAAGCA GGAGCCAGAACTGGTCTGCAGGGAGAACTAATGATTCCTGTGGTACATATGTATAGACCCTTCTTTCATTTGTAAATTTATTTGTATATAGGCATCTGTAGGTGAAAATTATAACTGCCTACCTAT ] [-] EMBL CB662598 [ CTCTCTAGCTCCAGAGATAGTTCTTGGTAGGGGCCATGGATTTTCTGCTGACTGGTGGGCGCTGGGAGTGTTGATTTATTTCATGCTGCAATCAGACATGCCATTTGGCTCTTGGAGGGAGAGTGAACTGGAACCTTTTGCAAAGATTGCCAAGGGTCACCTTGTCATGCCATCAACATTCAGCATCGAAGTTGTTGACCTTATTACAAAGCTACTCGAGGTAAACGAAAATGCGCGCCTTGGGGCCAAGGGAGCGGAATCTGTGAAAAGACACCCCTGGTTTGATGGCATTGACTGGAAACAAATAGCAGATGGTACTTATACAGTACCCCAAGAAATCACCGATCGTGTCGACAGCTATGTAGAAACTCTTACAGAGGACTTGACAGCATCCCCTTCCAT GCCA AGTGAAGAAACAGCTGATCAGGCTGCTCCAGAATGGATCCAGGATTGGTGATCTCA GTTGCTGCATGAACAAAAAGATGTTTGGGAAAACTTGTTTAGCATTTCA AATGAAAAAAAAAACGGGTACATACA TGATTACA GCATGTGAATTTTTGTCGAAATGGTGGATTATACGTAGCAACAATTCTGTATAGAGGAATCATCAGCTCAACCTGCAACCATCTGATGGATATGCTAGCAAAAATGTGAAAAATGGTGTTGCAGTAGTTCAAGCA GGAGCCAGAACTGGTCTGCAGGGAGAACTAATGATTCCTGTGGTACATATGTATAGACCCTTCTTTCATTTGTAAATTTATTTGTAT TATTCATCTGTAGGTGAAAATTATAACTGCCTACCTATGTA ] [+] EMBL BI812387 [ TTCCATGGCCACAGTGAAGAAACAGCTGATCAGGCTGCTCCAGAAT GATCCAGGATTGGTGATCTCACGTTGCTGCATGAAC AAAAGATGTTTGGGAAAACTTGTTTAGCATTTCACAATG AAAAAAAAACGGGTACATACACTGATTACACGCATGTGAATTTTTGTCGAAATGGTGGATTATACGTAGCAACCATTCTGTATAGAGGAATCATCAGCTCAACCTGCAACCATCTGATGGATATGCTAGCCAAAATGTGAAAAATGGTGTTGCAGTAGTTCAAGCACGGAGCCAGAACTGGTCTGCAGGGAGAACTAATGATTCCTGTGGTACATATGTATAGACCCTTCTTTCATTTGTAAATTTATTTGTAT TATTCATCTGTAGGTGAAAATTATAACTGCCTACCTATGTAATTTTGTATAACATTTTGATAAGAAAACCGGGGCCATGTGTCAAAAAAAAAA] consensusID : consensus_9765#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 235 fasta sequence [AGAATTGGTAGGCTCAGAATCACCATCGACAATAAGTTTGAATCCCAAGAACCAGCGTTCCAGGCAAGATCTATCACGTGCTCGGCTGAGAGCACTTGAAAGTTCCCTGGAAAATGGTCGACTATGGGTCCCTCCATCCCCATCGCATCGGAAGACATGGGAAGAGCAAGTAAGGTCACCAATTTCCATCACTGTTGAACTTTGTATTAGTTCAGGAGTTCTTGATATCCTATTA] [+] EMBL AK062696 [AGAATTGGTAGGCTCAGAATCACCATCGACAATAAGTTTGAATCCCAAGAACCAGCGTTCCAGGCAAGATCTATCACGTGCTCGGCTGAGAGCACTTGAAAGTTCCCTGGAAAATGGTCGACTATGGGTCCCTCCATCCCCATCGCATCGGAAGACATGGGAAGAGCAAGTAAGGTCACCAATTTCCATCACTGTTGAACTTTGTATTAGTTCAGGAGTTCTTGATATCCTATTA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9765#0 ACCACCTCCTCTCCTCTCCTCTCCTCTCCTTCTTCCTCTTCCCCTGCACTGCACTGCCAC 60 consensus_9765#1 ------------------------------------------------------------ consensus_9765#0 TGCATTAATCCCCTTCACCGATTCCTCCTCTCCTCTCCTCCACCTCCACCTCCACCGCAC 120 consensus_9765#1 ------------------------------------------------------------ consensus_9765#0 GCACCAAACCGCAGTTTCTCTCTCTCTCCCTTTCGCTGTTCCTGTGTGCCTTGCTTAGCT 180 consensus_9765#1 ------------------------------------------------------------ consensus_9765#0 GCCGCTTTCCTCTCTCCCTCCCTCTCTTTCTTTCTTCCTCTCTCTGCTCAACCTCACAAA 240 consensus_9765#1 ------------------------------------------------------------ consensus_9765#0 AATTCCCCCCTTTTGCTCTTTCTCTTTCTTTCCTCCCCGATCGACTTCTTCTTCTTCTTC 300 consensus_9765#1 ------------------------------------------------------------ consensus_9765#0 ACCTTCTCCAGTTCTCCTCATCCGTCTTCGGCGATCTTTGCCGCTGTGAACATTTGACAG 360 consensus_9765#1 ------------------------------------------------------------ consensus_9765#0 TTTACAGGTTCCTCCATTTCAGTTGTTGGATTAAGAAAGAGGCTTTATGCTTTATAAATA 420 consensus_9765#1 ------------------------------------------------------------ consensus_9765#0 AGTAAGCATCATCATCAATATAAGTTGTGGCTGCTCTTAAAGATCCTCAGATTCTGTACA 480 consensus_9765#1 ------------------------------------------------------------ consensus_9765#0 AGTTCAGAGCTTCCTCTGTTTGGCAGTGTCAGTACACGTGCTTGCATAGTTCATAACTGG 540 consensus_9765#1 ------------------------------------------------------------ consensus_9765#0 GGTGGAGATATCTTAGTTTCATGTTCTTTGTGCTTCTTGGCTCTTACCCAGCTGGTTTAA 600 consensus_9765#1 ------------------------------------------------------------ consensus_9765#0 CATCTGATGGGCTGCTCACCTTCTAAGGTGTGTTCATGTCCACATTATAAGGGCAGTTTG 660 consensus_9765#1 ------------------------------------------------------------ consensus_9765#0 TGCTTCTGTGACTGTGGATGCTTTGGACAAACACCTGACTCCCCAAGAGAGTCAAGGGGA 720 consensus_9765#1 ------------------------------------------------------------ consensus_9765#0 AAATCAAACCGGGTTAGGGGAAAGACAGATTCTAGTGCTTCAGATGCTTCTTCTGATGAC 780 consensus_9765#1 ------------------------------------------------------------ consensus_9765#0 CTAGAGGAAGATGATGATGGATTGCACCAAATGAACATTACAAGGGACTCTAATGTTGGT 840 consensus_9765#1 ------------------------------------------------------------ consensus_9765#0 ATCAATCGACTCTCAAGGGTCTCATCACAATTTCTTCCACCAGAAGGTTCACGTAAAGTT 900 consensus_9765#1 ------------------------------------------------------------ consensus_9765#0 CGAATCCCATTGGGGAATTATGACCTGAGATATTCCTACTTGTCTCAAAGAGGCTACTAC 960 consensus_9765#1 ------------------------------------------------------------ consensus_9765#0 CCAGAATCATTGGACAAGCCAAACCAAGACAGTTTTTGTATACATACTCCATTTGGAACA 1020 consensus_9765#1 ------------------------------------------------------------ consensus_9765#0 AGCCCTGATGACCATTTCTTTGGTGTATTTGATGGCCATGGAGAATATGGAGCTCAGTGC 1080 consensus_9765#1 ------------------------------------------------------------ consensus_9765#0 TCACAATTTGTAAAGCGAAGACTATGCGAAAACCTGCTCAGAGATGACCGGTTCCGTACT 1140 consensus_9765#1 ------------------------------------------------------------ consensus_9765#0 GATGTTGTTCAGGCTCTTCATTCTGCTTTCTTGGCAACAAATTCACAGCTTCATGCAGAC 1200 consensus_9765#1 ------------------------------------------------------------ consensus_9765#0 AGCTTAGATGATTCTATGAGTGGTACTACTGCAGTCACTGTGCTGGTGAGGGGTAAAACT 1260 consensus_9765#1 ------------------------------------------------------------ consensus_9765#0 ATTTACATTGCGAATACGGGTGATTCACGTGCTGTTATTGCCGAAAAAAAGAGGGGAAGA 1320 consensus_9765#1 ------------------------------------------------------------ consensus_9765#0 TGTTGTTGCTGTTGACCTGTCCATAGATCAAACACACTACAGGACTGATGAGCTTGAAAG 1380 consensus_9765#1 ------------------------------------------------------------ consensus_9765#0 GGTCAAGGAGTGTGGTGCTAGGGTTATGACGTTGGATCAGATAGAGGGGCTAAAGAACCC 1440 consensus_9765#1 ------------------------------------------------------------ consensus_9765#0 AGATGTACAGTGTTGGGGCACCGAGGAAAGTGATGACGGTGATCCTCCAAGGTTGTGGGT 1500 consensus_9765#1 ------------------------------------------------------------ consensus_9765#0 GCAAAATGGCATGTATCCAGGAACTGCTTTTACTCGCAGCATTGGAGATTCTGTCGCTGA 1560 consensus_9765#1 ------------------------------------------------------------ consensus_9765#0 ATCTATCGGTGTTGTCGCTAATCCTGAGATTTTTATCCTGGAGCTCAATGCCAACCATCC 1620 consensus_9765#1 ------------------------------------------------------------ consensus_9765#0 ATTCTTTGTTCTTGCTAGTGATGGAGTTTTTGAGTTTCTTTCTAGTCAAACTGTTGTCGA 1680 consensus_9765#1 ------------------------------------------------------------ consensus_9765#0 CATGATTGCTAAATACAAGGATCCTCGTGATGCGTGCGCTGCAATTGTTGCTGAATCCTA 1740 consensus_9765#1 ------------------------------------------------------------ consensus_9765#0 TCGCCTCTGGCTACAGTATGAAACTCGTACAGATGACATTACAATAATAGTTGTTCATAT 1800 consensus_9765#1 ------------------------------------------------------------ consensus_9765#0 TAACGGGTTAACTGATATGGAATGTACTCAAACTGTAATGAAAGTATCTTTGCAACCTTC 1860 consensus_9765#1 ------------------------------------------------------------ consensus_9765#0 CCAACAAGTCGTAGAATTGGTAGGCTCAGAATCACCATCGACAATAAGTTTGAATCCCAA 1920 consensus_9765#1 ------------AGAATTGGTAGGCTCAGAATCACCATCGACAATAAGTTTGAATCCCAA 48 ************************************************ consensus_9765#0 GAACCAGCGTTCCAGGCAAGATCTATCACGTGCTCGGCTGAGAGCACTTGAAAGTTCCCT 1980 consensus_9765#1 GAACCAGCGTTCCAGGCAAGATCTATCACGTGCTCGGCTGAGAGCACTTGAAAGTTCCCT 108 ************************************************************ consensus_9765#0 GGAAAATGGTCGACTATGGGTCCCTCCATCCCCATCGCATCGGAAGACATGGGAAGAGCA 2040 consensus_9765#1 GGAAAATGGTCGACTATGGGTCCCTCCATCCCCATCGCATCGGAAGACATGGGAAGAGCA 168 ************************************************************ consensus_9765#0 AGCACATATTGAGCGAATACTACACGACCATTTCCTCTTCAGGAAGCTCACTGACTCACA 2100 consensus_9765#1 AGTA-AGGTCA--CCAAT-TTCCATCACTGTTGAACTTTGTATTAGTTCAGGAGTTCTTG 224 ** * * * * *** * ** ** ** ** ** *** ** consensus_9765#0 GTGCCATGTTTTACTTGATTGCATGCAAAGAGTTGAGGTGAAAGCTGGGGATATAGTGGT 2160 consensus_9765#1 ATATCCTATTA------------------------------------------------- 235 * * * ** consensus_9765#0 GCAGCAGGGCGGTGAAGGCGAGTGCTTCTATGTAGTTGGGAGTGGTGAGTTTGAAGTGCT 2220 consensus_9765#1 ------------------------------------------------------------ consensus_9765#0 AGCCATTCAGGAAGAAGATGGAAAGGAAGTTACAAAGGTTCTACATCGGTATACTGCTGA 2280 consensus_9765#1 ------------------------------------------------------------ consensus_9765#0 CAAACTATCTTCTTTTGGGGAGCTAGCACTAATGTATAATAAACCACTTCAAGCTTCAGT 2340 consensus_9765#1 ------------------------------------------------------------ consensus_9765#0 CCGTGCTGTGACTACTGGAACTTTATGGGCTCTAAAGCGAGAGGATTTTCGGGGAATTCT 2400 consensus_9765#1 ------------------------------------------------------------ consensus_9765#0 GATGTCAGAGTTTTCAAATATACCATCATTAAAGTTGCTCCGATCAGTGGAGCTGTTTAC 2460 consensus_9765#1 ------------------------------------------------------------ consensus_9765#0 GAGATTGACAATGCTTCAACTAAGTCAACTTGCTGATTCTCTTGTTGAAGTAACTTTTGG 2520 consensus_9765#1 ------------------------------------------------------------ consensus_9765#0 GGATGGTCAAATGATAGTAGACAAGAATGATGATGCATCTTCCTTGTATATTATTCAAAG 2580 consensus_9765#1 ------------------------------------------------------------ consensus_9765#0 AGGTCGTGTGAAACTTAAATTGGCTGCAGATCAGGTAAATTCAGATGCCTGGGATCTTCT 2640 consensus_9765#1 ------------------------------------------------------------ consensus_9765#0 TAGTTCTCAAACAGAGGTGGCCCAATCAAGTCGAGAAGATGGTAATTACGTGTTTGAGAT 2700 consensus_9765#1 ------------------------------------------------------------ consensus_9765#0 AGATGAAGGGGGACACTTTGGAGAGTGGGCTCTCTTTGGGGAGACAATTGCTTTTACTGC 2760 consensus_9765#1 ------------------------------------------------------------ consensus_9765#0 TATGTCAGTTGGTGATGTGACTTGTTCTACTATTGCAAAGGAGAAGTTTGACTCAATTAT 2820 consensus_9765#1 ------------------------------------------------------------ consensus_9765#0 TGGGCCCTTGCCAAAAGTTTCCCAGTCTGATTCCAAGCTCAAAGATTCCTTGGTTCCTAA 2880 consensus_9765#1 ------------------------------------------------------------ consensus_9765#0 AGGGCATGGTGCAGATGATAGTTCCTTCAGGAAGGCGCAGCTATCTGATTTGGAATGGAA 2940 consensus_9765#1 ------------------------------------------------------------ consensus_9765#0 AATGTGCATATATGCCGCTGATTGCAGTGAGATTGGTCTTGTCCAACTAAGAGGTTCTGA 3000 consensus_9765#1 ------------------------------------------------------------ consensus_9765#0 CAAGATCAAAAGCTTAAAGAGGTTTTACATCAAGAGAGTAAAAGACCTTCATAAGGAAAA 3060 consensus_9765#1 ------------------------------------------------------------ consensus_9765#0 ACACGTATTTGATGAGAAGGATCTCATGAAATCTTTGAGCCAATCAACTTGTGTGCCAGA 3120 consensus_9765#1 ------------------------------------------------------------ consensus_9765#0 AGTTCTATGTACTTGCGCTGATCAATCCTACCTAGGAATACTGCTGAATTGTTGCCTTTG 3180 consensus_9765#1 ------------------------------------------------------------ consensus_9765#0 TTGCTCACTGGCTTCAATACTTCATGCACCACTAAATGAGTCGTCTGCACGATTCTATGT 3240 consensus_9765#1 ------------------------------------------------------------ consensus_9765#0 AGCCTCTGTCGTCGTAGCGCTAGAAAATCTCCATCAGAGGTCCATTCTTTACAGAGGTGT 3300 consensus_9765#1 ------------------------------------------------------------ consensus_9765#0 TTCTGCAGACATTCTTATGGTCGACCGATCAGGGCATCTTCAACTAGTTGACTTCAGGTT 3360 consensus_9765#1 ------------------------------------------------------------ consensus_9765#0 TGCAAAGAAGTTGCAAGGTGAAAGGACTTACACAATATGTGGGATTGCCGACTCTCTAGC 3420 consensus_9765#1 ------------------------------------------------------------ consensus_9765#0 TCCAGAGATAGTTCTTGGTAGGGGCCATGGATTTTCTGCTGACTGGTGGGCGCTGGGAGT 3480 consensus_9765#1 ------------------------------------------------------------ consensus_9765#0 GTTGATTTATTTCATGCTGCAATCAGACATGCCATTTGGCTCTTGGAGGGAGAGTGAACT 3540 consensus_9765#1 ------------------------------------------------------------ consensus_9765#0 GGAACCTTTTGCAAAGATTGCCAAGGGTCACCTTGTCATGCCATCAACATTCAGCATCGA 3600 consensus_9765#1 ------------------------------------------------------------ consensus_9765#0 AGTTGTTGACCTTATTACAAAGCTACTCGAGGTAAACGAAAATGCGCGCCTTGGGGCCAA 3660 consensus_9765#1 ------------------------------------------------------------ consensus_9765#0 GGGAGCGGAATCTGTGAAAAGACACCCCTGGTTTGATGGCATTGACTGGAAACAAATAGC 3720 consensus_9765#1 ------------------------------------------------------------ consensus_9765#0 AGATGGTACTTATACAGTACCCCAAGAAATCACCGATCGTGTCGACAGCTATGTAGAAAC 3780 consensus_9765#1 ------------------------------------------------------------ consensus_9765#0 TCTTACAGAGGACTTGACAGCATCCCCTTCCATGCCAAGTGAAGAAACAGCTGATCAGGC 3840 consensus_9765#1 ------------------------------------------------------------ consensus_9765#0 TGCTCCAGAATGGATCCAGGATTGGTGATCTCAGTTGCTGCATGAACAAAAAGATGTTTG 3900 consensus_9765#1 ------------------------------------------------------------ consensus_9765#0 GGAAAACTTGTTTAGCATTTCAAATGAAAAAAAAAACGGGTACATACATGATTACAGCAT 3960 consensus_9765#1 ------------------------------------------------------------ consensus_9765#0 GTGAATTTTTGTCGAAATGGTGGATTATACGTAGCAACAATTCTGTATAGAGGAATCATC 4020 consensus_9765#1 ------------------------------------------------------------ consensus_9765#0 AGCTCAACCTGCAACCATCTGATGGATATGCTAGCAAAAATGTGAAAAATGGTGTTGCAG 4080 consensus_9765#1 ------------------------------------------------------------ consensus_9765#0 TAGTTCAAGCAGGAGCCAGAACTGGTCTGCAGGGAGAACTAATGATTCCTGTGGTACATA 4140 consensus_9765#1 ------------------------------------------------------------ consensus_9765#0 TGTATAGACCCTTCTTTCATTTGTAAATTTATTTGTATTATTCATCTGTAGGTGAAAATT 4200 consensus_9765#1 ------------------------------------------------------------ consensus_9765#0 ATAACTGCCTACCTATGTAATTTTGTATAACATTTTGATAAGAAAACCGGGGCCATGTGT 4260 consensus_9765#1 ------------------------------------------------------------ consensus_9765#0 CAAAAAAAAAA 4271 consensus_9765#1 ----------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||