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Oryza sativa
cluster # 9767 cluster # 9767       Sequences # 6       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9767#0 length = 1675 sequences # 4  
consensus_9767#1 length = 781 sequences # 1  
consensus_9767#2 length = 763 sequences # 1  

consensusID : consensus_9767#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1675
fasta sequence
                              [CTCGTCCCCTTCCCTCTCCTCTCTCGCTCGCTCCTCTTCCGCGGCGCGCGCGCCGGCGACTCGCCGCGTCGGGCCGGCCGACAACCGCCGCGAGGGAGAAGCCCCCTCCCCTTGGGGGGCACCCATGACGTCGTGCGGGTGCCTGGTGCTCGAGAAGGTGGAGGACCACGGCGGCGAGGCGGCGGGGAGGGGGAGAGGGAGGCTCGCGCAGGGTGGCGGCGGCGGCGGCGGTGGCTGCGGATCGTGCGCGGGGGAGTGGAGGAGCCGGTCGGAGACCATGTTCCCCATCTACGTGATGGGGAGCTCGCGGGCCAGCTCCGCCGCGGCGGCGCGGGGCATAGTCGACGCCGCCGGGGACCCCATATGGGAGGCCGTCAAGTCGGAGGCCAAGTCTGAGGCAGAGAAGGAACCTATTTTAAGTAGCTTCTTGTACGCCAGCGTACTATCTCATGACTGTCTCGAGAGGGCGTTGAGTTTCGTCCTTGCAAACAGGCTCGAAGATCCAACATTGCTTGCAACTCAGTTAATAGACATTTTCAATGATGTTATGATGAACAACAAAGATATACGCCGTTCTATTCGCCTTGATGCTCAGGCCTTTAAAGACAGAGATCCTGCCTGTGCACAATACAGTTGGGCATTGTTGTACCTCAAGGGTTACCATTCCGTGCAATCCTATAGGATAGCTCATGTATTATGGAATCAAGGTCGTAAAGTTCTGGCATTGGCACTGCAGAGCCGTATCAGTGAGGTTTTTGCAGTGGATATACACCCAGCGGCCAGAATTGGAGAGGGAATATTGTTGGATCATGGAACGGGTCTAGTTATTGGTGAAACTGCCATTGTTGGAAACTGGGTTTCATTAATGCAGGGTGTTACACTTGGTGGTACTGGCAAGGAAAATGGAGATAGACACCCCAAGATTGGTCAGGGGGCTCTTCTTGGAGCTGGTGCTACTATCCTCGGCAACATAAACGTAGGCGAAGGTGCCATGATTGCTGCTGGTTCCCTTGTTTTAAAGGATGTACCTCCCCACA-GTATGGCA-GTAGGAAACCCTGCA-AAGGTAGTTGGGTATAAAGATAAGGAAGACCCTTCTTTAACTATGAAACATGATGCCAGAAGAGATTATTTTGAGCATGTTGCCGTTAGTTTTTCAGATGACAGAGCTAATGGAAGTGTTGTGAAGTAAAAAAAGGTTCGATGATGTTTGGCTGGCAGTTCAAAGGAATAGCATATGTTTCGACATTTCTTCCCAGAGGACAGCACTGGGTATCTGATTATGCAAGGGTGCTTCTCTTTTTTGCCCAGGTACCCATGGTCCTGAAGCTCCCCAGTTATATTTTCTCGTGGCCTTTGGACCGCTGTAATAATGTGATGTTTATTTTTCTGGTTACTTTGTAAGGACTATGTACTGGTAGTGGAGACCAGTACATAGTTGCTACTGGTAGTAGAGACCAGCAGCAACTATGTACTTCAGAATACAAGCTTTCTTTTTTGAATCCCAGTAGCATCAGCGTAGTGCTTAAGACTTAGTGCAAGCTTTCTTTTCTGAATCAGTAGCGTGAAGTATATTCTACAGTACTAGCCTATTAGGTAAAGATGTTTTTCTTTTGATGTACTAACCCATCAGAAAAAAAATGTTACATCTGGATGGGATAATAAAAAAGGAGGCAAT]

[+] EMBL AK067089             [CTCGTCCCCTTCCCTCTCCTCTCTCGCTCGCTCCTCTTCCGCGGCGCGCGCGCCGGCGACTCGCCGCGTCGGGCCGGCCGACAACCGCCGCGAGGGAGAAGCCCCCTCCCCTTGGGGGGCACCCATGACGTCGTGCGGGTGCCTGGTGCTCGAGAAGGTGGAGGACCACGGCGGCGAGGCGGCGGGGAGGGGGAGAGGGAGGCTCGCGCAGGGTGGCGGCGGCGGCGGCGGTGGCTGCGGATCGTGCGCGGGGGAGTGGAGGAGCCGGTCGGAGACCATGTTCCCCATCTACGTGATGGGGAGCTCGCGGGCCAGCTCCGCCGCGGCGGCGCGGGGCATAGTCGACGCCGCCGGGGACCCCATATGGGAGGCCGTCAAGTCGGAGGCCAAGTCTGAGGCAGAGAAGGAACCTATTTTAAGTAGCTTCTTGTACGCCAGCGTACTATCTCATGACTGTCTCGAGAGGGCGTTGAGTTTCGTCCTTGCAAACAGGCTCGAAGATCCAACATTGCTTGCAACTCAGTTAATAGACATTTTCAATGATGTTATGATGAACAACAAAGATATACGCCGTTCTATTCGCCTTGATGCTCAGGCCTTTAAAGACAGAGATCCTGCCTGTGCACAATACAGTTGGGCATTGTTGTACCTCAAGGGTTACCATTCCGTGCAATCCTATAGGATAGCTCATGTATTATGGAATCAAGGTCGTAAAGTTCTGGCATTGGCACTGCAGAGCCGTATCAGTGAGGTTTTTGCAGTGGATATACACCCAGCGGCCAGAATTGGAGAGGGAATATTGTTGGATCATGGAACGGGTCTAGTTATTGGTGAAACTGCCATTGTTGGAAACTGGGTTTCATTAATGCAGGGTGTTACACTTGGTGGTACTGGCAAGGAAAATGGAGATAGACACCCCAAGATTGGTCAGGGGGCTCTTCTTGGAGCTGGTGCTACTATCCTCGGCAACATAAACGTAGGCGAAGGTGCCATGATTGCTGCTGGTTCCCTTGTTTTAAAGGATGTACCTCCCCACA GTATGGCA GTAGGAAACCCTGCA AAGGTAGTTGGGTATAAAGATAAGGAAGACCCTTCTTTAACTATGAAACATGATGCCAGAAGAGATTATTTTGAGCATGTTGCCGTTAGTTTTTCAGATGACAGAGCTAATGGAAGTGTTGTGAAGTAAAAAAAGGTTCGATGATGTTTGGCTGGCAGTTCAAAGGAATAGCATATGTTTCGACATTTCTTCCCAGAGGACAGCACTGGGTATCTGATTATGCAAGGGTGCTTCTCTTTTTTGCCCAGGTACCCATGGTCCTGAAGCTCCCCAGTTATATTTTCTCGTGGCCTTTGGACCGCTGTAATAATGTGATGTTTATTTTTCTGGTTACTTTGTAAGGACTATGTACTGGTAGTGGAGACCAGTACATAGTTGCTACTGGTAGTAGAGACCAGCAGCAACTATGTACTTCAGAATACAAGCTTTCTTTTTTGAATCCCAGTAGCATCAGCGTAGTGCTTAAGACTTAGTGCAAGCTTTCTTTTCTGAATCAGTAGCGTGAAGTATATTCTACAGTACTAGCCTATTAGGTAAAGATGTTTTTCTTTTGATGTACTAACCCATCAGAAAAAAAATGTTACATCTGGATGGGATAATAAAAAAGGAGGCAAT]
[+] EMBL CB674564             [            CCTCTCCTCTCTCGCTCGCTCCTCTTCCGCGGCGCGCGCGCCGGCGACTCGCCGCGTCGGGCCGGCCGACAACCGCCGCGAGGGAGAAGCCCCCTCCCCTTGGGGGGCACCCATGACGTCGTGCGGGTGCCTGGTGCTCGAGAAGGTGGAGGACCACGGCGGCGAGGCGGCGGGGAGGGGGAGAGGGAGGCTCGCGCAGGGTGGCGGCGGCGGCGGCGGTGGCTGCGGATCGTGCGCGGGGGAGTGGAGGAGCCGGTCGGAGACCATGTTCCCCATCTACGTGATGGGGAGCTCGCGGGCCAGCTCCGCCGCGGCGGCGCGGGGCATAGTCGACGCCGCCGGGGACCCCATATGGGAGGCCGTCAAGTCGGAGGCCAAGTCTGAGGCAGAGAAGGAACCTATTTTAAGTAGCTTCTTGTACGCCAGCGTACTATCTCATGACTGTCTCGAGAGGGCGTTGAGTTTCGTCCTTGCAAACAGGCTCGAAGATCCAACATTGCTTGCAACTCAGTTAATAGACATTTTCAATGATGTTATGATGAACAACAAAGATATACGCCGTTCTATTCGCCTTGATGCTCAGGCCTTTAAAGACAGAGATCCTGCCTGTGCACAATACAGTTGGGCATTGTTGTACCTCAAGGGTTACCATTCCGTGCAATCCTATAGGATAGCTCATGTATTATGGAATCAAGGTCGTAAAGTTCTGGCATTGGCACTGCAGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CB677506             [                                                                                                                                                                                      CGGGGAGGGGGAGAGGGAGGCTCGCGCAGGGTGGCGGCGGCGGCGGCGGTGGCTGCGGATCGTGCGCGGGGGAGTGGAGGAGCCGGTCGGAGACCATGTTCCCCATCTACGTGATGGGGAGCTCGCGGGCCAGCTCCGCCGCGGCGGCGCGGGGCATAGTCGACGCCGCCGGGGACCCCATATGGGAGGCCGTCAAGTCGGAGGCCAAGTCTGAGGCAGAGAAGGAACCTATTTTAAGTAGCTTCTTGTACGCCAGCGTACTATCTCATGACTGTCTCGAGAGGGCGTTGAGTTTCGTCCTTGCAAACAGGCTCGAAGATCCAACATTGCTTGCAACTCAGTTAATAGACATTTTCAATGATGTTATGATGAACAACAAAGATATACGCCGTTCTATTCGCCTTGATGCTCAGGCCTTTAAAGACAGAGATCCTGCCTGTGCACAATACAGTTGGGCATTGTTGTACCTCAAGGGTTACCATTCCGTGCAATCCTATAGGATAGCTCATGTATTATGGAATCAAGGTCGTAAAGTTCTGGCATTGGCACTGCAGAGCCGTATCAGTGAGGTTTTTGCAGTGGATATACACCCAGCGGCCAGAATTGGAGAGGGAATATTGTTGGATCATGGAACGGGTCTAGTTATTGGTGAAACTGCCATTGTTGGAAACTGGGTTTCATTAATGCAGGGTGTTACACTTGGTGGTACTGGCAAGGAAAATGGAGATAGACACCCCAAGATTGGTCAGGGGGCTCTTCTTGGAGCTGGTGCTACTATCCTCGGCAACATAAACGTAGGCGAAGGTGCa                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL BI812593             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         CTACTATCCTCGGC ACATAAACGTA GCGAAGGTGCCATGATTGCTGCTGGTTCCCTTGTTTTAAAGGATGTACCTCCCCACACGTATGGCACGTAGGAAACCCTGCACAAGGTAGTTGGGTATAAAGATAAGGAAGACCCTTCTTTAACTATGAAACATGATGCCAGAAGAGATTATTTTGAGCATGTTGCCGTTAGTTTTTCAGATGACA AGCTAATGGAAGTGTTGTGAAGTAAAAAAAGGTTCGATGATGTTTGGCTGGCAGTTCAAAGGAATAGCATATGTTTCGACATTTCTTCCCAGAGGACAGCACTGGGTATCTGATTATGCAAGGGTGCTTCTCTTTTTTGCCCAGGTACCCATGGTCCTGAAGCTCCCCAGTTATATTTTCTCGTGGCCTTTGGACCGCTGTAATAATGTGATGTTTATTTTTCTGGTTACTTTGTAAGGACTATGTACTGGTAGTGGAGACCAGTACATAGTTGCTACTGGTAGTAGAGACCAGCAGC ACTATGTACTTCAGAATACAAGCTTTCTTTTTTGAAaaa                                                                                                                                                                             ]


>consensus_9767#0 CTCGTCCCCTTCCCTCTCCTCTCTCGCTCGCTCCTCTTCCGCGGCGCGCGCGCCGGCGAC TCGCCGCGTCGGGCCGGCCGACAACCGCCGCGAGGGAGAAGCCCCCTCCCCTTGGGGGGC ACCCATGACGTCGTGCGGGTGCCTGGTGCTCGAGAAGGTGGAGGACCACGGCGGCGAGGC GGCGGGGAGGGGGAGAGGGAGGCTCGCGCAGGGTGGCGGCGGCGGCGGCGGTGGCTGCGG ATCGTGCGCGGGGGAGTGGAGGAGCCGGTCGGAGACCATGTTCCCCATCTACGTGATGGG GAGCTCGCGGGCCAGCTCCGCCGCGGCGGCGCGGGGCATAGTCGACGCCGCCGGGGACCC CATATGGGAGGCCGTCAAGTCGGAGGCCAAGTCTGAGGCAGAGAAGGAACCTATTTTAAG TAGCTTCTTGTACGCCAGCGTACTATCTCATGACTGTCTCGAGAGGGCGTTGAGTTTCGT CCTTGCAAACAGGCTCGAAGATCCAACATTGCTTGCAACTCAGTTAATAGACATTTTCAA TGATGTTATGATGAACAACAAAGATATACGCCGTTCTATTCGCCTTGATGCTCAGGCCTT TAAAGACAGAGATCCTGCCTGTGCACAATACAGTTGGGCATTGTTGTACCTCAAGGGTTA CCATTCCGTGCAATCCTATAGGATAGCTCATGTATTATGGAATCAAGGTCGTAAAGTTCT GGCATTGGCACTGCAGAGCCGTATCAGTGAGGTTTTTGCAGTGGATATACACCCAGCGGC CAGAATTGGAGAGGGAATATTGTTGGATCATGGAACGGGTCTAGTTATTGGTGAAACTGC CATTGTTGGAAACTGGGTTTCATTAATGCAGGGTGTTACACTTGGTGGTACTGGCAAGGA AAATGGAGATAGACACCCCAAGATTGGTCAGGGGGCTCTTCTTGGAGCTGGTGCTACTAT CCTCGGCAACATAAACGTAGGCGAAGGTGCCATGATTGCTGCTGGTTCCCTTGTTTTAAA GGATGTACCTCCCCACAGTATGGCAGTAGGAAACCCTGCAAAGGTAGTTGGGTATAAAGA TAAGGAAGACCCTTCTTTAACTATGAAACATGATGCCAGAAGAGATTATTTTGAGCATGT TGCCGTTAGTTTTTCAGATGACAGAGCTAATGGAAGTGTTGTGAAGTAAAAAAAGGTTCG ATGATGTTTGGCTGGCAGTTCAAAGGAATAGCATATGTTTCGACATTTCTTCCCAGAGGA CAGCACTGGGTATCTGATTATGCAAGGGTGCTTCTCTTTTTTGCCCAGGTACCCATGGTC CTGAAGCTCCCCAGTTATATTTTCTCGTGGCCTTTGGACCGCTGTAATAATGTGATGTTT ATTTTTCTGGTTACTTTGTAAGGACTATGTACTGGTAGTGGAGACCAGTACATAGTTGCT ACTGGTAGTAGAGACCAGCAGCAACTATGTACTTCAGAATACAAGCTTTCTTTTTTGAAT CCCAGTAGCATCAGCGTAGTGCTTAAGACTTAGTGCAAGCTTTCTTTTCTGAATCAGTAG CGTGAAGTATATTCTACAGTACTAGCCTATTAGGTAAAGATGTTTTTCTTTTGATGTACT AACCCATCAGAAAAAAAATGTTACATCTGGATGGGATAATAAAAAAGGAGGCAAT



consensusID : consensus_9767#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 781
fasta sequence
                              [GGTTCCCTTGTTTTAAAGGATGTACCTCCCCACAGAGAGCAAAATCAGGGGAGGCGGGCAGGCCGGGGTGGGCGGGGGGATAACATGATCATGATAAAGTAATTTTGGACTAGGAACTTCATTATATCGGATATAAAAAAAAGTATGGCAGTAGGAAACCCTGCAAAGGTAGTTGGGTATAAAGATAAGGAAGACCCTTCTTTAACTATGAAACATGATGCCAGAAGAGATTATTTTGAGCATGTTGCCGTTAGTTTTTCAGATGACAAAGCTAATGGAAGTGTTGTGAAGTAAAAAAAGGTTCGATGATGTTTGGCTGGCAGTTCAAAGGAATAGCATATGTTTCGACATTTCTTCCCAGAGGACAGCACTGGGTATCTGATTATGCAAGGGTGCTTCTCTTTTTTGCCCAGGTACCCATGGTCCTGAAGCTCCCCAGTTATATTTTCTCGTGGCCTTTGGACCGCTGTAATAATGTGATGTTTATTTTTCTGGTTACTTTGTAAGGACTATGTACTGGTAGTGGAGACCAGTACATAGTTGCTACTGGTAGTAGAGACCAGCAGCAACTATGTACTTCAGAATACAAGCTTTCTTTTTTGAATCCCAGTAGCATCAGCGTAGTGCTTAAGACTTAGTGCAAGCTTTCTTTTCTGAATCAGTAGCGTGAAGTATATTCTACAGTACTAGCCTATTAGGTAAAGATGTTTTTCTTTTGATGTACTAACCCATCAGAAAAAAAATGTTACATCTGGATGGGATAATAAAAAAGGAGGCAATT]

[-] EMBL CB674565             [GGTTCCCTTGTTTTAAAGGATGTACCTCCCCACAGAGAGCAAAATCAGGGGAGGCGGGCAGGCCGGGGTGGGCGGGGGGATAACATGATCATGATAAAGTAATTTTGGACTAGGAACTTCATTATATCGGATATAAAAAAAAGTATGGCAGTAGGAAACCCTGCAAAGGTAGTTGGGTATAAAGATAAGGAAGACCCTTCTTTAACTATGAAACATGATGCCAGAAGAGATTATTTTGAGCATGTTGCCGTTAGTTTTTCAGATGACAAAGCTAATGGAAGTGTTGTGAAGTAAAAAAAGGTTCGATGATGTTTGGCTGGCAGTTCAAAGGAATAGCATATGTTTCGACATTTCTTCCCAGAGGACAGCACTGGGTATCTGATTATGCAAGGGTGCTTCTCTTTTTTGCCCAGGTACCCATGGTCCTGAAGCTCCCCAGTTATATTTTCTCGTGGCCTTTGGACCGCTGTAATAATGTGATGTTTATTTTTCTGGTTACTTTGTAAGGACTATGTACTGGTAGTGGAGACCAGTACATAGTTGCTACTGGTAGTAGAGACCAGCAGCAACTATGTACTTCAGAATACAAGCTTTCTTTTTTGAATCCCAGTAGCATCAGCGTAGTGCTTAAGACTTAGTGCAAGCTTTCTTTTCTGAATCAGTAGCGTGAAGTATATTCTACAGTACTAGCCTATTAGGTAAAGATGTTTTTCTTTTGATGTACTAACCCATCAGAAAAAAAATGTTACATCTGGATGGGATAATAAAAAAGGAGGCAATT]


>consensus_9767#1 GGTTCCCTTGTTTTAAAGGATGTACCTCCCCACAGAGAGCAAAATCAGGGGAGGCGGGCA GGCCGGGGTGGGCGGGGGGATAACATGATCATGATAAAGTAATTTTGGACTAGGAACTTC ATTATATCGGATATAAAAAAAAGTATGGCAGTAGGAAACCCTGCAAAGGTAGTTGGGTAT AAAGATAAGGAAGACCCTTCTTTAACTATGAAACATGATGCCAGAAGAGATTATTTTGAG CATGTTGCCGTTAGTTTTTCAGATGACAAAGCTAATGGAAGTGTTGTGAAGTAAAAAAAG GTTCGATGATGTTTGGCTGGCAGTTCAAAGGAATAGCATATGTTTCGACATTTCTTCCCA GAGGACAGCACTGGGTATCTGATTATGCAAGGGTGCTTCTCTTTTTTGCCCAGGTACCCA TGGTCCTGAAGCTCCCCAGTTATATTTTCTCGTGGCCTTTGGACCGCTGTAATAATGTGA TGTTTATTTTTCTGGTTACTTTGTAAGGACTATGTACTGGTAGTGGAGACCAGTACATAG TTGCTACTGGTAGTAGAGACCAGCAGCAACTATGTACTTCAGAATACAAGCTTTCTTTTT TGAATCCCAGTAGCATCAGCGTAGTGCTTAAGACTTAGTGCAAGCTTTCTTTTCTGAATC AGTAGCGTGAAGTATATTCTACAGTACTAGCCTATTAGGTAAAGATGTTTTTCTTTTGAT GTACTAACCCATCAGAAAAAAAATGTTACATCTGGATGGGATAATAAAAAAGGAGGCAAT T



consensusID : consensus_9767#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 763
fasta sequence
                              [TTTTGCAGTGGATATACACCCAGCGGCCAGAATTGGAGAGGGAATATTGTTGGATCATGGAACGGGTCTAGTTATTGGTGAAACTGCCATTGTTGGAAACTGGGTTTCATTAATGCAGGGTGTTACACTTGGTGGTTCTGGCAAGGAAAATGGAGATAGACACCCCTAGATTGGTCAGGGGGCTCTTCTTGGAGCTGGTGCTTCTATCCTCGGCAACATAAACGTAGGCGAAGGTGCCATGATTGCTGCTGGTTCCCTTGTTTTAAAGGATGTACCTCCCCACAGTATGGCAGTAGGAAACCCTGCAAAGGTAGTTGGGTATAAAGATAAGGAAGACCCTTCTTTAACTATGAAACATGATGCCAGAAGAGATTATTTTGAGCATGTTGCCGTTAGTTTTTCAGATGACAAAGCTAATGGAAGTGTTGTGAAGTAAAAAAAGGTTCGACGATGTTTGGCTGGCAGTTCAAAGGAATAGCATATGTTTCGACATTTCTTCTCCAGAGGCCAGACACTGGGTATCTGATTATGCAAGGGTGCTTTTTTTTTTTGCCCAGGTACCCATGGTCCTGAAGCTCCCCAGTTATATTTTTTCGTGGCCTTTGGCCCGCTGTAATAATGTGATGTTTATTTTTGTGGTTACTTTGTAAGGCCCTATGTACTGGTAGTGGAGCCCAGTACATAGTTGCTCCTGGTAGTAGAGACCAGCAGCAACTATGTACTTCAGAATACAACGCTTTCTTTTTTGTCAAACAAAAAGGGG]

[-] EMBL CB677507             [TTTTGCAGTGGATATACACCCAGCGGCCAGAATTGGAGAGGGAATATTGTTGGATCATGGAACGGGTCTAGTTATTGGTGAAACTGCCATTGTTGGAAACTGGGTTTCATTAATGCAGGGTGTTACACTTGGTGGTTCTGGCAAGGAAAATGGAGATAGACACCCCTAGATTGGTCAGGGGGCTCTTCTTGGAGCTGGTGCTTCTATCCTCGGCAACATAAACGTAGGCGAAGGTGCCATGATTGCTGCTGGTTCCCTTGTTTTAAAGGATGTACCTCCCCACAGTATGGCAGTAGGAAACCCTGCAAAGGTAGTTGGGTATAAAGATAAGGAAGACCCTTCTTTAACTATGAAACATGATGCCAGAAGAGATTATTTTGAGCATGTTGCCGTTAGTTTTTCAGATGACAAAGCTAATGGAAGTGTTGTGAAGTAAAAAAAGGTTCGACGATGTTTGGCTGGCAGTTCAAAGGAATAGCATATGTTTCGACATTTCTTCTCCAGAGGCCAGACACTGGGTATCTGATTATGCAAGGGTGCTTTTTTTTTTTGCCCAGGTACCCATGGTCCTGAAGCTCCCCAGTTATATTTTTTCGTGGCCTTTGGCCCGCTGTAATAATGTGATGTTTATTTTTGTGGTTACTTTGTAAGGCCCTATGTACTGGTAGTGGAGCCCAGTACATAGTTGCTCCTGGTAGTAGAGACCAGCAGCAACTATGTACTTCAGAATACAACGCTTTCTTTTTTGTCAAACAAAAAGGGG]


>consensus_9767#2 TTTTGCAGTGGATATACACCCAGCGGCCAGAATTGGAGAGGGAATATTGTTGGATCATGG AACGGGTCTAGTTATTGGTGAAACTGCCATTGTTGGAAACTGGGTTTCATTAATGCAGGG TGTTACACTTGGTGGTTCTGGCAAGGAAAATGGAGATAGACACCCCTAGATTGGTCAGGG GGCTCTTCTTGGAGCTGGTGCTTCTATCCTCGGCAACATAAACGTAGGCGAAGGTGCCAT GATTGCTGCTGGTTCCCTTGTTTTAAAGGATGTACCTCCCCACAGTATGGCAGTAGGAAA CCCTGCAAAGGTAGTTGGGTATAAAGATAAGGAAGACCCTTCTTTAACTATGAAACATGA TGCCAGAAGAGATTATTTTGAGCATGTTGCCGTTAGTTTTTCAGATGACAAAGCTAATGG AAGTGTTGTGAAGTAAAAAAAGGTTCGACGATGTTTGGCTGGCAGTTCAAAGGAATAGCA TATGTTTCGACATTTCTTCTCCAGAGGCCAGACACTGGGTATCTGATTATGCAAGGGTGC TTTTTTTTTTTGCCCAGGTACCCATGGTCCTGAAGCTCCCCAGTTATATTTTTTCGTGGC CTTTGGCCCGCTGTAATAATGTGATGTTTATTTTTGTGGTTACTTTGTAAGGCCCTATGT ACTGGTAGTGGAGCCCAGTACATAGTTGCTCCTGGTAGTAGAGACCAGCAGCAACTATGT ACTTCAGAATACAACGCTTTCTTTTTTGTCAAACAAAAAGGGG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9767#0      CTCGTCCCCTTCCCTCTCCTCTCTCGCTCGCTCCTCTTCCGCGGCGCGCGCGCCGGCGAC 60
consensus_9767#2      ------------------------------------------------------------
consensus_9767#1      ------------------------------------------------------------
                                                                                  

consensus_9767#0      TCGCCGCGTCGGGCCGGCCGACAACCGCCGCGAGGGAGAAGCCCCCTCCCCTTGGGGGGC 120
consensus_9767#2      ------------------------------------------------------------
consensus_9767#1      ------------------------------------------------------------
                                                                                  

consensus_9767#0      ACCCATGACGTCGTGCGGGTGCCTGGTGCTCGAGAAGGTGGAGGACCACGGCGGCGAGGC 180
consensus_9767#2      ------------------------------------------------------------
consensus_9767#1      ------------------------------------------------------------
                                                                                  

consensus_9767#0      GGCGGGGAGGGGGAGAGGGAGGCTCGCGCAGGGTGGCGGCGGCGGCGGCGGTGGCTGCGG 240
consensus_9767#2      ------------------------------------------------------------
consensus_9767#1      ------------------------------------------------------------
                                                                                  

consensus_9767#0      ATCGTGCGCGGGGGAGTGGAGGAGCCGGTCGGAGACCATGTTCCCCATCTACGTGATGGG 300
consensus_9767#2      ------------------------------------------------------------
consensus_9767#1      ------------------------------------------------------------
                                                                                  

consensus_9767#0      GAGCTCGCGGGCCAGCTCCGCCGCGGCGGCGCGGGGCATAGTCGACGCCGCCGGGGACCC 360
consensus_9767#2      ------------------------------------------------------------
consensus_9767#1      ------------------------------------------------------------
                                                                                  

consensus_9767#0      CATATGGGAGGCCGTCAAGTCGGAGGCCAAGTCTGAGGCAGAGAAGGAACCTATTTTAAG 420
consensus_9767#2      ------------------------------------------------------------
consensus_9767#1      ------------------------------------------------------------
                                                                                  

consensus_9767#0      TAGCTTCTTGTACGCCAGCGTACTATCTCATGACTGTCTCGAGAGGGCGTTGAGTTTCGT 480
consensus_9767#2      ------------------------------------------------------------
consensus_9767#1      ------------------------------------------------------------
                                                                                  

consensus_9767#0      CCTTGCAAACAGGCTCGAAGATCCAACATTGCTTGCAACTCAGTTAATAGACATTTTCAA 540
consensus_9767#2      ------------------------------------------------------------
consensus_9767#1      ------------------------------------------------------------
                                                                                  

consensus_9767#0      TGATGTTATGATGAACAACAAAGATATACGCCGTTCTATTCGCCTTGATGCTCAGGCCTT 600
consensus_9767#2      ------------------------------------------------------------
consensus_9767#1      ------------------------------------------------------------
                                                                                  

consensus_9767#0      TAAAGACAGAGATCCTGCCTGTGCACAATACAGTTGGGCATTGTTGTACCTCAAGGGTTA 660
consensus_9767#2      ------------------------------------------------------------
consensus_9767#1      ------------------------------------------------------------
                                                                                  

consensus_9767#0      CCATTCCGTGCAATCCTATAGGATAGCTCATGTATTATGGAATCAAGGTCGTAAAGTTCT 720
consensus_9767#2      ------------------------------------------------------------
consensus_9767#1      ------------------------------------------------------------
                                                                                  

consensus_9767#0      GGCATTGGCACTGCAGAGCCGTATCAGTGAGGTTTTTGCAGTGGATATACACCCAGCGGC 780
consensus_9767#2      ---------------------------------TTTTGCAGTGGATATACACCCAGCGGC 27
consensus_9767#1      ------------------------------------------------------------
                                                                                  

consensus_9767#0      CAGAATTGGAGAGGGAATATTGTTGGATCATGGAACGGGTCTAGTTATTGGTGAAACTGC 840
consensus_9767#2      CAGAATTGGAGAGGGAATATTGTTGGATCATGGAACGGGTCTAGTTATTGGTGAAACTGC 87
consensus_9767#1      ------------------------------------------------------------
                                                                                  

consensus_9767#0      CATTGTTGGAAACTGGGTTTCATTAATGCAGGGTGTTACACTTGGTGGTACTGGCAAGGA 900
consensus_9767#2      CATTGTTGGAAACTGGGTTTCATTAATGCAGGGTGTTACACTTGGTGGTTCTGGCAAGGA 147
consensus_9767#1      -------------------------------------------GGTTCCCTTGTTTTAAA 17
                                                                 ***     **      *

consensus_9767#0      AAATGGAGATAGACACCCCAAGATTGGTCAGGGGGCTCTTCTTGGAGCTGGTGCTACTAT 960
consensus_9767#2      AAATGGAGATAGACACCCCTAGATTGGTCAGGGGGCTCTTCTTGGAGCTGGTGCTTCTAT 207
consensus_9767#1      GGATGTACCTCCCCACAGAGAGCAAAATCAGGGGAGGCGGGCAGGCCGGGGTGGGCGGG- 76
                        *** *  *   ***    **     *******   *     **    ****       

consensus_9767#0      CCTCGGCAACATAAACGTAGGCGAAGGTGCCATGATTGCTGCTGGTTCCCTTGTTTTAAA 1020
consensus_9767#2      CCTCGGCAACATAAACGTAGGCGAAGGTGCCATGATTGCTGCTGGTTCCCTTGTTTTAAA 267
consensus_9767#1      --GGGATAACATGATCAT-GATAAAGTAATTTTGG-----ACTAGGAACTTCATTATATC 128
                          *  ***** * * * *   ***      **       ** *   * *  ** **  

consensus_9767#0      GGATGTACCTCCCCACAGTATGGCAGTAGGAAACCCTGCAAAGGTAGTTGGGTATAAAGA 1080
consensus_9767#2      GGATGTACCTCCCCACAGTATGGCAGTAGGAAACCCTGCAAAGGTAGTTGGGTATAAAGA 327
consensus_9767#1      GGATATAAA---AAAAAGTATGGCAGTAGGAAACCCTGCAAAGGTAGTTGGGTATAAAGA 185
                      **** **       * ********************************************

consensus_9767#0      TAAGGAAGACCCTTCTTTAACTATGAAACATGATGCCAGAAGAGATTATTTTGAGCATGT 1140
consensus_9767#2      TAAGGAAGACCCTTCTTTAACTATGAAACATGATGCCAGAAGAGATTATTTTGAGCATGT 387
consensus_9767#1      TAAGGAAGACCCTTCTTTAACTATGAAACATGATGCCAGAAGAGATTATTTTGAGCATGT 245
                      ************************************************************

consensus_9767#0      TGCCGTTAGTTTTTCAGATGACAGAGCTAATGGAAGTGTTGTGAAGTAAAAAAAGGTTCG 1200
consensus_9767#2      TGCCGTTAGTTTTTCAGATGACAAAGCTAATGGAAGTGTTGTGAAGTAAAAAAAGGTTCG 447
consensus_9767#1      TGCCGTTAGTTTTTCAGATGACAAAGCTAATGGAAGTGTTGTGAAGTAAAAAAAGGTTCG 305
                      *********************** ************************************

consensus_9767#0      ATGATGTTTGGCTGGCAGTTCAAAGGAATAGCATATGTTTCGACATTTCTTC-CCAGAGG 1259
consensus_9767#2      ACGATGTTTGGCTGGCAGTTCAAAGGAATAGCATATGTTTCGACATTTCTTCTCCAGAGG 507
consensus_9767#1      ATGATGTTTGGCTGGCAGTTCAAAGGAATAGCATATGTTTCGACATTTCTTC-CCAGAGG 364
                      * ************************************************** *******

consensus_9767#0      ACAG-CACTGGGTATCTGATTATGCAAGGGTGCTTCTCTTTTTTGCCCAGGTACCCATGG 1318
consensus_9767#2      CCAGACACTGGGTATCTGATTATGCAAGGGTGCTTTTTTTTTTTGCCCAGGTACCCATGG 567
consensus_9767#1      ACAG-CACTGGGTATCTGATTATGCAAGGGTGCTTCTCTTTTTTGCCCAGGTACCCATGG 423
                       *** ****************************** * **********************

consensus_9767#0      TCCTGAAGCTCCCCAGTTATATTTTCTCGTGGCCTTTGGACCGCTGTAATAATGTGATGT 1378
consensus_9767#2      TCCTGAAGCTCCCCAGTTATATTTTTTCGTGGCCTTTGGCCCGCTGTAATAATGTGATGT 627
consensus_9767#1      TCCTGAAGCTCCCCAGTTATATTTTCTCGTGGCCTTTGGACCGCTGTAATAATGTGATGT 483
                      ************************* ************* ********************

consensus_9767#0      TTATTTTTCTGGTTACTTTGTAAGGAC-TATGTACTGGTAGTGGAGACCAGTACATAGTT 1437
consensus_9767#2      TTATTTTTGTGGTTACTTTGTAAGGCCCTATGTACTGGTAGTGGAGCCCAGTACATAGTT 687
consensus_9767#1      TTATTTTTCTGGTTACTTTGTAAGGAC-TATGTACTGGTAGTGGAGACCAGTACATAGTT 542
                      ******** **************** * ****************** *************

consensus_9767#0      GCTACTGGTAGTAGAGACCAGCAGCAACTATGTACTTCAGAATACAA-GCTTTCTTTTTT 1496
consensus_9767#2      GCTCCTGGTAGTAGAGACCAGCAGCAACTATGTACTTCAGAATACAACGCTTTCTTTTTT 747
consensus_9767#1      GCTACTGGTAGTAGAGACCAGCAGCAACTATGTACTTCAGAATACAA-GCTTTCTTTTTT 601
                      *** ******************************************* ************

consensus_9767#0      GAATCCCAGTAGCATCAGCGTAGTGCTTAAGACTTAGTGCAAGCTTTCTTTTCTGAATCA 1556
consensus_9767#2      G---TCAAACAAAAAGGGG----------------------------------------- 763
consensus_9767#1      GAATCCCAGTAGCATCAGCGTAGTGCTTAAGACTTAGTGCAAGCTTTCTTTTCTGAATCA 661
                      *    * *  *  *   *                                          

consensus_9767#0      GTAGCGTGAAGTATATTCTACAGTACTAGCCTATTAGGTAAAGATGTTTTTCTTTTGATG 1616
consensus_9767#2      ------------------------------------------------------------
consensus_9767#1      GTAGCGTGAAGTATATTCTACAGTACTAGCCTATTAGGTAAAGATGTTTTTCTTTTGATG 721
                                                                                  

consensus_9767#0      TACTAACCCATCAGAAAAAAAATGTTACATCTGGATGGGATAATAAAAAAGGAGGCAAT- 1675
consensus_9767#2      ------------------------------------------------------------
consensus_9767#1      TACTAACCCATCAGAAAAAAAATGTTACATCTGGATGGGATAATAAAAAAGGAGGCAATT 781
                                                                                  




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)