These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9770#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 2103 fasta sequence [TCACACCACACGCCTCGCATCGCATCCCCACCTCCGCCGATCCCGCCGTCTCCGGCCATCTCCGCCGCCGGCAGCCACCACCACCTCCTCCTCTTCCCCTCTCCCCCTTCCGCCCAATTGGTTGCCCCGACCAAACCCTACACGCGGAAGGGCTCGCTCGCTCGATCCGGTGCGGGCAGCGCGCGCGCGGGGCTCGACGCGGGCGGCGACGGGGGGCGGGCTCGATCCGGCGGAGCAGTGGGCGCTCTCTTCCACGATGCGTCTACCCTCTTCGCGCGAGCACGACAAGGTTCTTTTTGCGGGGTCAACAATAATGAGGAGAATTTGAGTTGGTCTGGAATTACTCTGGGATGTTATCATTGGCGAAAAGTATAGATCCCTTTTGGTAGCTGAGGAGAGATCTCAATTTTTTCAGAGAGTAGATGTCGTTTCGCAGCATCGTGCGCGATGTGAGGGATGGATTTGGGAGCCTATCGAGGAGGGGATTTGAGGTCAGGATTCTGGGGCATCGCAGGGGGAAGTCTCATGGTGCTGTCCATGAGTTGCATGACCCGGTGCCTGTAATCCAGAGCAGCTGCTGGGCTAGCTTGCCTCCGGAATTGCTTCGTGATATCATTGAGAGGTTGGAAGAAAGTGAGGCTACATGGCCTTCTAGGAAGCATGTGGTTGCTTGTGCGGGTGTCTGCAGAACATGGAGGGAGATGTGTAAAGAGATCGTCAAGAATCCAGAGTTGTGTGGGAAGATCACCTTCCCTATTTCTCTG----AGCCTGGGCCACGAGATGGAACTATGCAGTGTTTCATTAGGAGGGATAAGTCTACGCAGACCTACTATTTGTACCTCTCTCTTGGCTCTGCTGTGCTTGTTGACAATGGCAAATTCCTTCTATCAGCAAAAAGAAACTGGCATGCAACATGTACAGAATATGTGATATCTATGAATGCTAACAATTTATCTAGGTCTACCAACACAAACATTGGAAAATTGAGGTCAAACTTCCTTGGCACAAAGTTTGTAATATATGATACCCACACTCCGTACAATGCAACTAGTGATTCACAGTCAGGGAAAACAAGCCGAAGATTCTCCAACAAGGGAACAGCAAAGCATCCCTGCAGCACATATAGCATAGCAAACATCTCATATGAGCTAAACGTCTTTGGAACTCGGGGTCCTAGGCGGATGTGCTGTTTAATGCACTCCATCCCTGCCTCATCTCTTGAGGCTGGT-GGGACTGTTCCTAGCCAGCCGGATAGCATCCTTGCCCATTCCCTCAATGAATCCTCCTTT-AGGAGTGTCTCCTTTTCGAAATCGTCCGTTATGGACCATTCCATGCATTTCAGCAGTGCTCAGTTCTCTGACATCTCAATTGGAGATGGCCCAAGGATTGGGGG-CCGGGTATTGAGCGATGA-TGAGGAGTGCAAGGAGACACCTTTGATTCTCCAAAACAAGGCTCCAAGATGGCATGAGCAGCTACAGTGCTGGTGCTTAAACTTCCGGGGCCGGGTAACTGTTGCTTCTGTCAAGAACTTCCAGCTCATCGC-AGCCACGCAGCCTGCTGCGGGAGCCCCAACTCCA-TCACA-GCCTGTTCCACCACCCCCACCA-GAGCATGATAAGGTCAT-ACTG-CAATTCGGGAAGGTT-GCCA-AGGACATGTTCACCA-TGGATTACCACTACCCGCTCTCAGCCTTCCAGGCATTTGCTATCTCCCTGAGTAGTTTCGACACCAAGCTGGCCT-GCGAATAGAACTTCCAGGCAGG-CCAGAAACATCATGGATGCTTCTTATTTGACG-CCCTGAGGGCATGC-CCCTGGAT-GGAGCTGACCATCCCCA-AGTTTAGCCTGGGAC-CCGTTCTGTTGTATGTTACTGATGATGTGTTAACTCAGAAACACCCA-AGCAACAAAAGGCA-AATTGTTATTTTAGCA-TTTAGCTTATTTATTCTGATTTTGCTTTGTAATTGAATGTTATCTTTATTTCTTTTTGACCCATAGCTCTCTCTATAACAGGTATTCTGTATGTGCATCGGATAATTTTCGCAGAATTCATTTGACTGTTCTCCAGTGATTTATTAACTGAGAAAGCTAATAATTTGGTGATTCAAAAAAAAAAA] [+] EMBL AK070139 [TCACACCACACGCCTCGCATCGCATCCCCACCTCCGCCGATCCCGCCGTCTCCGGCCATCTCCGCCGCCGGCAGCCACCACCACCTCCTCCTCTTCCCCTCTCCCCCTTCCGCCCAATTGGTTGCCCCGACCAAACCCTACACGCGGAAGGGCTCGCTCGCTCGATCCGGTGCGGGCAGCGCGCGCGCGGGGCTCGACGCGGGCGGCGACGGGGGGCGGGCTCGATCCGGCGGAGCAGTGGGCGCTCTCTTCCACGATGCGTCTACCCTCTTCGCGCGAGCACGACAAGGTTCTTTTTGCGGGGTCAACAATAATGAGGAGAATTTGAGTTGGTCTGGAATTACTCTGGGATGTTATCATTGGCGAAAAGTATAGATCCCTTTTGGTAGCTGAGGAGAGATCTCAATTTTTTCAGAGAGTAGATGTCGTTTCGCAGCATCGTGCGCGATGTGAGGGATGGATTTGGGAGCCTATCGAGGAGGGGATTTGAGGTCAGGATTCTGGGGCATCGCAGGGGGAAGTCTCATGGTGCTGTCCATGAGTTGCATGACCCGGTGCCTGTAATCCAGAGCAGCTGCTGGGCTAGCTTGCCTCCGGAATTGCTTCGTGATATCATTGAGAGGTTGGAAGAAAGTGAGGCTACATGGCCTTCTAGGAAGCATGTGGTTGCTTGTGCGGGTGTCTGCAGAACATGGAGGGAGATGTGTAAAGAGATCGTCAAGAATCCAGAGTTGTGTGGGAAGATCACCTTCCCTATTTCTCTG AGCCTGGGCCACGAGATGGAACTATGCAGTGTTTCATTAGGAGGGATAAGTCTACGCAGACCTACTATTTGTACCTCTCTCTTGGCTCTGCTGTGCTTGTTGACAATGGCAAATTCCTTCTATCAGCAAAAAGAAACTGGCATGCAACATGTACAGAATATGTGATATCTATGAATGCTAACAATTTATCTAGGTCTACCAACACAAACATTGGAAAATTGAGGTCAAACTTCCTTGGCACAAAGTTTGTAATATATGATACCCACACTCCGTACAATGCAACTAGTGATTCACAGTCAGGGAAAACAAGCCGAAGATTCTCCAACAAGGGAACAGCAAAGCATCCCTGCAGCACATATAGCATAGCAAACATCTCATATGAGCTAAACGTCTTTGGAACTCGGGGTCCTAGGCGGATGTGCTGTTTAATGCACTCCATCCCTGCCTCATCTCTTGAGGCTGGT GGGACTGTTCCTAGCCAGCCGGATAGCATCCTTGCCCATTCCCTCAATGAATCCTCCTTT AGGAGTGTCTCCTTTTCGAAATCGTCCGTTATGGACCATTCCATGCATTTCAGCAGTGCTCAGTTCTCTGACATCTCAATTGGAGATGGCCCAAGGATTGGGGG CCGGGTATTGAGCGATGA TGAGGAGTGCAAGGAGACACCTTTGATTCTCCAAAACAAGGCTCCAAGATGGCATGAGCAGCTACAGTGCTGGTGCTTAAACTTCCGGGGCCGGGTAACTGTTGCTTCTGTCAAGAACTTCCAGCTCATCGC AGCCACGCAGCCTGCTGCGGGAGCCCCAACTCCA TCACA GCCTGTTCCACCACCCCCACCA GAGCATGATAAGGTCAT ACTG CAATTCGGGAAGGTT GCCA AGGACATGTTCACCA TGGATTACCACTACCCGCTCTCAGCCTTCCAGGCATTTGCTATCTCCCTGAGTAGTTTCGACACCAAGCTGGCCT GCGAATAGAACTTCCAGGCAGG CCAGAAACATCATGGATGCTTCTTATTTGACG CCCTGAGGGCATGC CCCTGGAT GGAGCTGACCATCCCCA AGTTTAGCCTGGGACGCCGTTCTGTTGTATGTTACTGATGATGTGTTAACTCAGAAACACCCA AGCAACAAAAGGCA AATTGTTATTTTAGCA TTTAGCTTATTTATTCTGATTTTGCTTTGTAATTGAATGTTATCTTTATTTCTTTTTGACCCATAGCTCTCTCTATAACAGGTATTCTGTATGTGCATCGGATAATTTTCGCAGAATTCATTTGACTGTTCTCCA ] [+] EMBL CB096226 [ CGGTGCCTGTAATCCAGAGCAGCTGCTGGGCTAGCTTGCCTCCGGAATTGCTTCGTGATATCATTGAGAGGTTGGAAGAAAGTGAGGCTACATGGCCTTCTAGGAAGCATGTGGTTGCTTGTGCGGGTGTCTGCAGAACATGGAGGGAGATGTGTAAAGAGATCGTCAAGAATCCAGAGTTGTGTGGGAAGATCACCTTCCCTATTTCTCTGAGGCAGCCTGGGCCACGAGATGGAACTATGCAGTGTTTCATTAGGAGGGATAAGTCTACGCAGACCTACTATTTGTACCTCTCTCTTGGCTCTGCTGTGCTTGTTGACAATGGCAAATTCCTTCTATCAGCAAAAAGAAACTGGCGTGCAACATGTACAGAATATGTGATATCTATGAATGCTAACAATTTATCTAGGTCTACCAACACAAACATTGGAAAATTGAGGTCAAACTTCCTTGGCACAAAGTTTGTAATATATGATACCCACACTCCGTACAATGCAACTAGTGATTCACAGTCAGGGAAAACAAGCCGAAGATTCTCCAACAAGGGAACAGCAAAGCATCCCTGCAGCACATATAGCATAGCAAACATCTCATATGAGCTAAACGTCTTTGGAACTCGGGGTCCTAGGCGGATGCGCTGNTTAATGCACTCCATCCCTGCCTCATCTCTTGAGGCTGGTGGGGACTGNTCCTAGCCAGCCGGATAGCCTCCTTGCCCATTCCCTTAATGAATCCTNCTTTAAGGAGTGTCTCCTTTTCGAAATCGTCCGNTATGGACCATTCCATGCATTTCAGCAGTACTCAGTTCTCTGACATCTCAATNGGAGATGGNCCAAGGATTGGGGGNCCAGGTNTTGAGCGATGATTAAGGAGTGCCAGGga ] [-] EMBL CB964845 [ GCATTTCATCAGTGCTCAGTTCTCGGACATCTCAATTGGAGATGGCCCAAGGATTGGGGC CCGGGTATTGAGCGATGA TGAGGAGTGCAAGGAGACACCTTTGATTCTCCCAAACAAGGCTCCAAGATGGCATGAGCAGCTACAGTGCTGGTGCTTAAACTTCCGGGGCCGGGTAACTGTTGCTTCTGTCAAGAACTTCCAGCTCATCGC AGCCACGCAGCCTGCTGCGGGAGCCCCAACTCCA TCACA GCCTGTTCCACCACCCCCACCA GAGCATGATAAGGTCAT ACTG CAATTCGGGAAGGTT GCCA AGGACATGTTCACCA TGGATTACCACTACCCGCTCTCAGCCTTCCAGGCATTTGCTATCTCCCTGAGTAGTTTCGACACCAAGCTGGCCT GCGAATAGAACTTCCAGGCAGG CCAGAAACATCATGGATGCTTCTTATTTGACG CCCTGAGGGCATGC CCCTGGAT GGAGCTGACCATCCCCA AGTTTAGCCTGGGACGCCGTTCTGTTGTATGTTACTGATGATGTGTTAACTCAGAAACACCCA AGCAACAAAAGGCA AATTGTTATTTTAGCA TTTAGCTTATTTATTCTGATTTTGCTTTGTAA TGAATGTTATCTTTATTTCTTTTTGACCCATAGCTCTCTCTATAACAGGTATTCTGTATGTGCATCGGAT ] [+] EMBL BI812889 [ AGCTCATCTCAACCCAC CAG CTGCT C GGACCCCCAACTCCA TCACA GCCTGTTCCACCACCCCCACCACGAGCATGATAAGGTCAT ACT CAATTCGGGAAGGTT CCA AGGACATGTTCACCA TGGATTACCGCTACCCGCTCTCAGCCTTCCAGGCATTTGCTATCTCCCTGAGTAGTTTCGACACCAAGCT GCCTGGCGAATAGAACTTCCAGGCAGG CCAGAAACATCATGGATGCTTCTTATTTGACG CCCTGAGGGCATGC TCCTGGATGGGAGCTGACCATCCCCACAGTTTAGCCTGGGAC CCGTTCTGTTGTATGTTACTGATGATGTGTTAACTCAGAAACACCCACAGCCACCAAAGGCACAATTGTTATTTTAGCACTTTAGCTTATTTATTCTGATTTTGCTTTGTAATTGAATGTTATCTTTATTTCTTTTTGACCCATAGCTCTCTCTATAACAGGTATTCTGTATGTGCATCGGATAATTTTCGCAGAATTCATTTGACTGTTCTCCAGTGATTTATTAACTGAGAAAGCTAATAATTTGGTGATTCAAAAAAAAAA ] [+] EMBL BI812870 [ GGAGCCCCTACTCCAGTCACATGCCTGTTCCACCACCCCCACCA GAGCATGATAAGGTCATAACTGCCAATTCGGGAAGGTTGGCCACAGGACATGTTCACCACTGGATTACCGCTACCCGCTCTCAGCCTT CAGGCATTTGCTATCTCCCTGAGTAGTTTCGACACCAA CTGGCCT GCGAATAGAACTTCCAGGCAGGCCCAGAAACATCATGGATGCTTCTTATTTGACGCCCCTGAGGGCATGCTCGCTGGAT GGAGCTGACCATCCCCA AGTTTAGCCTGGGAC CCGTTCT TTGTATGTTACTGATGATGTGTTAACTCAG AACACCCA AGC ACAAAAGGCA AATTGTTATTTTAGCA TTTAGCTTATTTATTCTGATTTTGCTTTGTAATTGAATGTTATCTTTATTTCTTTTTGACCCATAGCTCTCTCTATAACAGGTATTCTGTATGTGCATCGGATAATTTTCGCAGAATTCATTTGACTGTTCTCCAGTGATTTATTAACTGAGAAAGCTAATAATTTGGTGATTCCAAAAAAAAAA] [+] EMBL BI812824 [ ATGC TCCTGGAT GGA CTGACCATCCCCA AGTTTAGCCTGGGAC CCGTTCTGTTGTATGTTACTGATGATGTGTTAACTCAGAAACACCCA AGC ACCAAAGGCC AATTGTTATTTTAGCA TTTAGCTTATTTATTCTGATTTTGCTTTGTAATTGAATGTTATCTTTATTTCTTTTTGACCCATAGCTCTCTCTATAACAGGTATTCTGTATGTGCATCGGATAATTTTCGCAGAATTCATTTGACTGTTCTCCCGTGATTTATTAACTGAGAAAGCTAATAATTTGGTGATTCAAAAAAAAAA ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||