These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9773#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 2815 fasta sequence [AGCTGACCTACTTTCGGAAATCCTTCTTCGGCCTGGTGGGTACCATATCAGCGATGCTAGTGAAGGTGGAGAAAGGCTCCTTCTGCAGGATGGAAGGGGTACGGCTAATGCTGGCGCGCGTTTTGCTGGTTCTCCAGCTGGTGGTGCTGGTGGTGATCCTCTCCCCTCTCGCGGTGTTCTACCTGTTCGGCCTCCTCATCACCGCCGGCCTCTCGCTGTGGCGCTTGCTGCAGCGCGACTACGGCGCCGGCGAGGAGGCGGCCAACCTCGCGCCGGCGCTCAACGTGCTCTACTCGCTG-GCGCTCGTCCAGGGCGCCCTCTTCTTCTACTACTTCACCTCGCGCCTCCTCGGGAGGCGGCTGGCGAACTTGGTCGCCGGAGTTTACAGCTTCGGCGGCGAGGGGGAGGAGGAGGATGACGGCGGGCGCACGTCGGTGGTGGAGTACATGCGGCAGACGAGGAACGGATGCGAGAAGGACCCGTCGTCGGTGAGAGGGAGGAACCTCGTCACGTTCGCCGTGACGATGATGAAGGAGTCGTCGCCGTCGTCGNTGTCGCCCGGCGACTACTCCTCCGCGGCTACGATCCTCGACAAGCTCCTGTCACAGGCCTGGCTGCGGGAGCAGCACGAGCTCATCAGGCAGCTCGTCGGGTCGTCCACCGACCTGATGGACAAGCTGCTGCAGACGCTCCGGTGCACGGGGACCCGCGACCGCGGCGTTCGGGAGCACGCCGCGAGGATCGTGGCGCACCTCGCCGGCGAGATCACGCTCGCCAGGTTCCCGCAAGGGATCCGGTGCATATACTCGCTGCTCACCACCCCGAGAAACCAGCAGCAAGACGACGACAACGACGACGACGACGACGACAGCGCCCAGTCCTCCGATCACTACAAGAAGCTCATGGTGCAGGGCCTCGTCATCCTCCACAAGCTAGCCGCCGCGGAGCACAACCGGCGGATCATCATCAACAGCACCCAGGGACGGCAGCTGCTCTCCATGGCCATGGCGCCCGTCAGCGCCGACCTGCTCCACCGCATCGACCACGAAGCGTGGAACGACATCGTCGCCTGCTCGCTGCAGCTCATGTGCCGGCTCGTCACCGCCCCCGGCGAGACCGGCGACAAGCTGCGTTCCCAGGTGCTGAACGACAAGGACGCCATCGGCACCATGGAGAGGATCCTCAACTGCGACGGATGCAACGAGAAGAGGCTCTATATTCTCGCCATTAACATCCTCACGCAGCTTCCCATGGCGGCGAAGAACAAGGTGGTGGACGAGGCTTCGAGCATGAGCGTCGAGAGCAGAAGGAAATTCACCAAGCTACTTCTACTCATCTATACCGACGAAGAGAAGGACGCCTTTATGAGACAAATGGCAGGTGAAGCATTGGCAATGCTGTCCGAACGAAGCAAGAGCGACGCCACAATCATCTTGAAAGCAAGTGACAGCACTCTCAAGGACCTCACCGCAATGCTCTTGGATGTAAATAGCAACAGAGGATACAGAATATGTGCAGCTGAAATCCTGGAGCATCTGTACATTCGATACACCAAGCAAGATGGCTATCTCAACAATCTGACGGAAGCCATGAAAGATGTGTTGCCAAAGGTGCTCGGAGAAATTTTTCTTGTGTCATGGACGCATAAAGAAAAGCAACCAGGAATGACAGAACAAGGAACAGAGGGAGTTAATTTCTCGGCACAAAAAGCTGACATTGAAAGTCAAGATCCCGTTGCTTGTCAACATGAAAAGGTTAAAGAGGAAAACGAAAAGGTTAAAGAGGAAAATGAAAAAGTTAAAGAGCAAGATGAAAAGGTTAAAGAGCAAACTGTGGATATGAAACTTTATGCAGCTTTACTGTCACTTAGTGAGGCAATATTTCAAAGATTGGTCAATGATGATAAAGATTTGGCTGAACTGACTGATAAAATTGCCCCAGGAGGAGGCACTGCATTTAGCTTCGCCGGAAAGCTCAAGGAGATGGTAGAAGGAAACAGTGAACAAGCAACAGCCAATTGCCTGAGAATGCTGAAGATTACTACCAGGATGATCATATCATTGATAAATCTCAATGGAGCCAAAGTCGGAGCAGACCTGGAGAGCTTGATGCA-TTCTCTGTTAAAAGCTTCAGAAAAGAT-GTTGGAACTGGAGGGCTTCATGATTTTCTCTAGCA-GCGATCGTACCGAAAGCACGAATCCTGCCAACATTCTCGCTTCCCTCGTGAAAGAAGCACAGGAGCTTCTGGAGAAGAAGAGGCAGGCACAAACTACACCCGCTCCATCAATGGAGACCAGCTGATTGAGTAAACAGACTATCAACACGATCGTATGCTGATCTGCAGACTGTTGGCAGTAATACCTGGAAACTGACACCGTACAATCCCTGAAAACTGTCTCTGTAATCTGTATGTGTGCTGAAACTTATCTATCTTGTCAATTGTCCCATCTATTTCAAAAACTTTCAAGTTGAACTTTACAACAAACTGTTGAGCTTTATTGGCAGTTCGTATAATATCCTCTTGGAACAGTAGATAAAACCTATCTGAAGAGGTGAAGAGGCCAAGGATCTGCATCAACCTACTGCACATTCAGTACTTGCTCACCTATGTTAGGGGTGAAACAACTATTACATAATTCGGGTATTTTGTATGCATTTTAAAACAAGTTGGATAATCAGAGACACCAATTCTGATGTACTCGTCTAATAAATTTATCCAGGACTTCGGACGGAACTCAGCCCATCTGAAGTATTCAGTTAGTTTGTTAGGCTTTGTTAGATAGGGTTGTTAGTCAATTAGAATCAATCAATCAAGA] [+] EMBL AK101180 [AGCTGACCTACTTTCGGAAATCCTTCTTCGGCCTGGTGGGTACCATATCAGCGATGCTAGTGAAGGTGGAGAAAGGCTCCTTCTGCAGGATGGAAGGGGTACGGCTAATGCTGGCGCGCGTTTTGCTGGTTCTCCAGCTGGTGGTGCTGGTGGTGATCCTCTCCCCTCTCGCGGTGTTCTACCTGTTCGGCCTCCTCATCACCGCCGGCCTCTCGCTGTGGCGCTTGCTGCAGCGCGACTACGGCGCCGGCGAGGAGGCGGCCAACCTCGCGCCGGCGCTCAACGTGCTCTACTCGCTG GCGCTCGTCCAGGGCGCCCTCTTCTTCTACTACTTCACCTCGCGCCTCCTCGGGAGGCGGCTGGCGAACTTGGTCGCCGGAGTTTACAGCTTCGGCGGCGAGGGGGAGGAGGAGGATGACGGCGGGCGCACGTCGGTGGTGGAGTACATGCGGCAGACGAGGAACGGATGCGAGAAGGACCCGTCGTCGGTGAGAGGGAGGAACCTCGTCACGTTCGCCGTGACGATGATGAAGGAGTCGTCGCCGTCGTCGNTGTCGCCCGGCGACTACTCCTCCGCGGCTACGATCCTCGACCAGCTCCTGTCACAGGCCTGGCTGCGGGAGCAGCACGAGCTCATCAGGCAGCTCGTCGGGTCGTCCACCGACCTGATGGACAAGCTGCTGCAGACGCTCTGGTGCATGGGGACCCGCGACGGTGGTGTTCGGGAGCATGCCTCCAGGATCGTGGCGCACCTCGCGGGNGAGATCAGGCTCGCCAGGTTCCCGCAAGGGATCGGGTGCATATACTCGCTGCTCACCACCCCGAGAAACCAGCAGCAAGACGACGACAACGACGACGACGACGACGACAGCGCCCAGTCCTCCGATCACTACAAGAAGCTCATGGTGCAGGGCCTCGTCATCCTCCACAAGCTAGCCGCCGCGGAGCACAACCGGCGGATCATCATCAACAGCACCCAGGGACGGCAGCTGCTCTCCATGGCCATGGCGCCCGTCAGCGCCGACCTGCTCCACCGCATCGACCACGAAGCGTGGAACGACATCGTCGCCTGCTCGCTGCAGCTCATGTGCCGGCTCGTCACCGCCCCCGGCGAGACCGGCGACAAGCTGCGTTCCCAGGTGCTGAACGACAAGGACGCCATCGGCACCATGGAGAGGATCCTCAACTGCGACGGATGCAACGAGAAGAGGCTCTATATTCTCGCCATTAACATCCTCACGCAGCTTCCCATGGCGGCGAAGAACAAGGTGGTGGACGAGGCTTCGAGCATGAGCGTCGAGAGCAGAAGGAAATTCACCAAGCTACTTCTACTCATCTATACCGACGAAGAGAAGGACGCCTTTATGAGACAAATGGCAGGTGAAGCATTGGCAATGCTGTCCGAACGAAGCAAGAGCGACGCCACAATCATCTTGAAAGCAAGTGACAGCACTCTCAAGGACCTCACCGCAATGCTCTTGGATGTAAATAGCAACAGAGGATACAGAATATGTGCAGCTGAAATCCTGGAGCATCTGTACATTCGATACACCAAGCAAGATGGCTATCTCAACAATCTGACGGAAGCCATGAAAGATGTGTTGCCAAAGGTGCTCGGAGAAATTTTTCTTGTGTCATGGACGCATAAAGAAAAGCAACCAGGAATGACAGAACAAGGAACAGAGGGAGTTAATTTCTCGGCACAAAAAGCTGACATTGAAAGTCAAGATCCCGTTGCTTGTCAACATGAAAAGGTTAAAGAGGAAAACGAAAAGGTTAAAGAGGAAAATGAAAAAGTTAAAGAGCAAGATGAAAAGGTTAAAGAGCAAACTGTGGATATGAAACTTTATGCAGCTTTACTGTCACTTAGTGAGGCAATATTTCAAAGATTGGTCAATGATGATAAAGATTTGGCTGAACTGACTGATAAAATTGCCCCAGGAGGAGGCACTGCATTTAGCTTCGCCGGAAAGCTCAAGGAGATGGTAGAAGGAAACAGTGAACAAGCAACAGCCAATTGCCTGAGAATGCTGAAGATTACTACCAGGATGATCATATCATTGATAAATCTCAATGGAGCCAAAGTCGGAGCAGACCTGGAGAGCTTGATGCA TTCTCTGTTAAAAGCTTCAGAAAAGAT GTTGGAACTGGAGGGCTTCATGATTTTCTCTAGCA GCGATCGTACCGAAAGCACGAATCCTGCCAACATTCTCGCTTCCCTCGTGAAAGAAGCACAGGAGCTTCTGGAGAAGAAGAGGCAGGCACAAACTACACCCGCTCCATCAATGGAGACCAGCTGATTGAGTAAACAGACTATCAACACGATCGTATGCTGATCTGCAGACTGTTGGCAGTAATACCTGGAAACTGACACCGTACAATCCCTGAAAACTGTCTCTGTAATCTGTATGTGTGCTGAAACTTATCTATCTTGTCAATTGTCCCATCTATTTCAAAAACTTTCAAGTTGAACTTTACAACAAACTGTTGAGCTTTATTGGCAGTTCGTATAATATCCTCTTGGAACAGTAGATAAAACCTATCTGAAGAGGTGAAGAGGCCAAGGATCTGCATCAACCTACTGCACATTCAGTACTTGCTCACCTATGTTAGGGGTGAAACAACTATTACATAATTCGGGTATTTTGTATGCATTTTAAAACAAGTTGGATAATCAGAGACACCAATTCTGATGTACTCGTCTAATAAATTTATCCAGGACTTCGGACGGAACTCAGCCCATCTGAAGTATTCAGTTAGTTTGTTAGGCTTTGTTAGATAGGGTTGTTAGTCAATTAGAATCAATCAATCAAGA] [+] EMBL AK060733 [ CTGCAGGATGGAAGGGGTACGGCTAATGCTGGCGCGCGTTTTGCTGGTTCTCCAGCTGGTGGTGCTGGTGGTGATCCTCTCCCCTCTCGCGGTGTTCTACCTGTTCGGCCTCCTCATCACCGCCGGCCTCTCGCTGTGGCGCTTGCTGCAGCGCGGCTACGGCGCCGGCGAGGAGGCGGCCAACCTCGCGCCGGCGCTCAACGTGCTCTACTCGCTG GCGCTCGTCCAGGGCGCCCTCTTCTTCTACTACTTCACCTCGCGCCTCCTCGGGAGGCGGCTGGCGAACTTGGTCGCCGGAGTTTACAGCTTCGGCGGCGAGGG GGAGGAGGATGACGGCGGGCGCACGTCGGTGGTGGAGTACATGCGGCAGACGAGGAACGGATGCGAGAAGGACCCGTCGTCGGTGAGAGGGAGGAACCTCGTCACGTTCGCCGTGACGATGATGAAGGAGTCGTCGTCGTCGTCGCTGTCGTCCGGCGACTACTCCTCCGGGGCTAGGATCCTCGACAAGCTCCTGTCACAGGCCTGGCTGCGGGAGCAGCACGAGCTCATCAGGCAGCTCGTCGGGTCGTCCACCGACCTGATGGACAAGCTGCTGCAGACGCTCCGGTGCACGGGGACCCGCGACCGCGGCGTTCGGGAGCACGCCGCGAGGATCGTGGCGCACCTCGCCGGCGAGATCACGCTCGCCAGGTTCCCGCAAGGGATCCGGTGCATATACTCGCTGCTCACCACCCCGAGAAACCAGCAGCAAGACGACGACAACGACGACGACGACGACGACAGCGCCCAGTCCTCCGATCACTACAAGAAGCTCATGGTGCAGGGCCTCGTCATCCTCCACAAGCTAGCCGCCGCGGAGCACAACCGGCGGATCATCATCAACAGCACCCAGGGACGGCAGCTGCTCTCCATGGCCATGGCGCCCGTCAGCGCCGACCTGCTCCACCGCATCGACCACGAAGCGTGGAACGACATCGTCGCCTGCTCGCTGCAGCTCATGTGCCGGCTCGTCACCGCCCCCGGCGAGACCGGCGACAAGCTGCGTTCCCAGGTGCTGAACGACAAGGACGCCATCGGCACCATGGAGAGGATCCTCAACTGCGACGGATGCAACGAGAAGAGGCTCTATATTCTCGCCATTAACATCCTCACGCAGCTTCCCATGGCGGCGAAGAACAAGGTGGTGGACGAGGCTTCGAGCATGAGCGTCGAGAGCAGAAGGAAATTCACCAAGCTACTTCTACTCATCTATACCGACGAAGAGAAGGACGCCTTTATGAGACAAATGGCAGGTGAAGCATTGGCAATGCTGTCCGAACGAAGCAAGAGCGACGCCACAATCATCTTGAAAGCAAGTGACAGCACTCTCAAGGACCTCACCGCAATGCTCTTGGATGTAAATAGCAACAGAGGATACAGAATATGTGCAGCTGAAATCCTGGAGCATCTGTACATTCGATACACCAAGCAAGATGGCTATCTCAACAATCTGACGGAAGCCATGAAAGATGTGTTGCCAAAGGTGCTCGGAGAAATTTTTCTTGTGTCATGGACGCATAAAGAAAAGCAACCAGGAATGACAGAACAAGGAACAGAGGGAGTTAATTTCTCGGCACAAAAAGCTGACATTGAAAGTCAAGATCCCGTTGCTTGTCAACATGAAAAGGTTAAAGAGGAAAACGAAAAGGTTAAAGAGGAAAATGAAAAAGTTAAAGAGCAAGATGAAAAGGTTAAAGAGCAAACTGTGGATATGAAACTTTATGCAGCTTTACTGTCACTTAGTGAGGCAATATTTCAAAGATTGGTCAATGATGATAAAGATTTGGCTGAACTGACTGATAAAATTGCCCCAGGAGGAGGCACTGCATTTAGCTTCGCCGGAAAGCTCAAGGAGATGGTAGAAGGAAACAGTGAACAAGCAACAGCCAATTGCCTGAGAATGCTGAAGATTACTACCAGGATGATCATATCATTGATAAATCTCAATGGAGCCAAAGTCGGAGCAGACCTGGAGAGCTTGATGCA TTCTCTGTTAAAAGCTTCAGAAAAGAT GTTGGAACTGGAGGGCTTCATGATTTTCTCTAGCA GCGATCGTACCGAAAGCGCGAATCCTGCCAACATTCTCGCTTCCCTCGTGAAAGAAGCACAGGAGCTTCTGGAGAAGAAGAGGCAGGCACAAACTACACCCGCTCCATCAATGGAGACCAGCTGATTGAGTAAACAGACTATCAACACGATCGTATGCTGATCTGCAGACTGTTGGCAGTAATACCTGGAAACTGACACCGTACAATCCCTGAAAACTGTCTCTGTAATCTGTATGTGTGCTGAAACTTATCTATCTTGTCAATTGTCCCATCTATTTCAAAAACTTTCAA ] [+] EMBL CB640691 [ TGCCGGTTCTCCAGCTGGTGGTGCTGGTGGTGATCCTCTCCCCTCTCGCGGTGTTCTACCTGTTCGGCCTCCTCATCACCGCCGGCCTCTCGCTGTGGCGCTTGCTGCAGCGCGACTACGGCGCCGGCGAGGAGGCGGCCAACCTCGCGCCGGCGCTCAACGTGCTCTACTCTTTGTTTTCTCGTACAGGGCGCCCTCTTC ] [+] EMBL CB638263 [ ACAAGCTCCTGT ACTAGCCTGGCTGCGGGAGCAGCACGAGCTCATCAGGCAGCTCGTCGGGTCGTCCACCGACCTGATGGACAAGCTGCTGCAGACGCTCCGGTGCACGGGGACCCGCGACCGCGGCGTTCGGGAGCACGCCGCGAGGATCGTGGCGCACCTCGCCGGCGAGATCACGCTCGCCAGGTTCCCGCAAGGGATCCGGTGCATATACTCGCTGCTCACCACCCCGAGAAACCAGCAGCAAGACGACGACAACGACGACGACGACGACGACAGCGCCCAGTCCTCCGATCACTACAAGAAGCTCATGGTGCAGGGCCTCGTCATCCTCCACAAGCTAGCCGCCGCGGAGCACAACCGGCGGATCATCATCAACAGCACCCATGGACGGCAGCTGCTCTCCATGGCCATGGCGCCCGTCAGCGCCGACCTGCTCCACCGCATCGACCACGAAGCGTGGAACGACATCGTCGCCTGCTCGCTGCAGC ] [-] EMBL CB638264 [ CTGTGGATATGAAACTTTATGCAGCTTTACTGTCACTTAGTGAGGCAATATTTCAAAGATTGGTCAATGATGATAAAGATTTGGCTGAACTGACTGATAAAATTGCCCCAGGAGGAGGCACTGCATTTAGCTTCGCCGGAAAGCTCAAGGAGATGGTAGAAGGAAACAGTGAACAAGCAACAGCCAATTGCTTGAGAATGCTGAAGATTACTACCAGGATGATCATATCATTGATAAATCTCAATGGAGCCAAAGTCGGAGCAGACCTGGAGAGCTTGATGCA TTCTCTGTTAAAAGCTTCAGAAAAGAT GTTGGAACTGGAGGGCTTCATGATTTTCTCTAGCA GCGATCGTACCGAAAGCACGAATCCTGCCAACATTCTCGCTTCCCTCGTGAAAGAAGCACAGGAGCTTCTGGAGAAGAAGAGGCAGGCACAAACTACACCCGCTCCATCAATGGAGACCAGCTGATTGAGTAAACAGACTATCAACACGATCGTATGCTGATCTGCAGACTGTTGGCAGTAATACCTGGAAACTGACACCGTACAATCCCTGAAAACTGTCTCTGTAATCTGTATGTGTGCTGAAACTTATCTATCTTGTCAATTGTCCCAT TATTTCAAAAA TTTCAAGTTGA ] [+] EMBL BI812951 [ ggAAGCTCAAGGAGATGGTAGAA GAACCCGTGAACAA C ACAGCC ATTGCCTGAGAATGCTGAAGATTACTACCAGGATGATCATATCATTGATAAATCTC ATGGAGCCCAAGTCGGAGCAGACCTGGAGAGCTTGATGCACTTCTCTGTTAAAAGCTTCAGAAAAGATCGTTGGAACTGGAGGGCTTCATGATTTTCTCTAGCACGCGATCGTACCGAAAGCACGAATCCTGCCAACATTCTCGCTTCCCTCGTGAAAGAAGCACAGGAGCTTCTGGAGAAGAAGAGGCAGGCAC AACTACACCCGCTCCATCAATGGAGACCAGCTGATTGAGTAGACAGACTATC ACACGATCGTATGCTGATCTGCAGACTGTT GCAGTAATCCCTGGAAACTGTCACCGTACAATCCCTGAAAACTGTCTCTGTAATCTGTATGTGTGCTGAAACTTATCTATCTTGTC ATTGTCCCATCTATTTC AAAACTTTGAAGTTGAACTTTACCAC AACTGTTGAGCTTTAaaaaaa ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||