These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9782#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 2815 fasta sequence [GATATCTCCTCATCCGATCCTCTTCTTGCTTCACCTGCTGCCCTCTGCTCCGGTCGATCGCTTGCATATTGCATATTTGCATGCAGAGCTGCCATGGGAATACCTTCTTTCTACAGGTGGCTCGTGAACAGATACCCAAGCATCGTCTCCCCGGCAAAGGAGAGCCGCCCTGCAGATGGCATCGTCGTCTACGACAACCTCTACCTCGACATGAATCAAATCATCCATTATTCCTTCCACCCGCAGGACCAGATGAACGCCGGCACAGATGTGTGCGCTCCGACGACGGTCAGCGAGGTTTTCGAGTCCATGTTCGACTACCTGGACCGCTTGTTTCGCATCGTCAGGCCGAGAAGGCTCCTCTACTTGGCAGTGGATGGGGTTGCTCCGTGCGCCAAAATGAACGGAATGCGAAGAGGACGACGTTTCGCCTGGGCGAGTGAAGAGGAGGAAATGCAGAAGATATCAGAAGGGGTCTCTGACCCCAATGTCATCACGCCAGGGACTGAATTCATGGAGAAGATATCGCAAGCGCTCACGTACTACATCCGTGCCAGATTGAATAGCAGTGATCCAGGGTGGAAACACATCATGGTAATACTCTCTGATGCAAATGTTCCTGGAGAAGGAGAGCACAAGATCATGTCTTTCATCCGTGCACAGCGCAGCATGGAAGGCTATGACCCCAACACACGACACTGCTTGTTTGGGCATGATGCGGATTTGATCATGCTTGCTTTGGCATCTCACGAAGTCCACTTCTCTATTTTGCGTGAGGATAATTCCCAGCTAACAGAAGCGGATCCAGAGAAACAATATCTGTTTTTGAACATATGGGTTCTGAGAGAGTACTTGGAGATTGAATTAAAGATACTGGACCCAGTTTGTGAGCCTGATATTGAGAGGCTGATTGATGACTTCATCTTCATTTGTTTCTTGATGGGAAACGATTTCATCCCCCACATTCCGTCGCTTGAGATGAAGGAGTATGCACTTGATCTTCTCATCGAGGTATACAAGACAACCTTCAACAAAATGGGAGGGTATATTGTCAACATAGAAAAGGTAAAAGATAAACATGCTGCATATCTGGAAGTCTCAAGGTTGGAAATATTTTTTCATCAACTGTCCATGTATGAAGAGAAAATTTTTCTAAAACGATACGAACTGGAACAGGAATCCCTGAAGAAGTCATGTCGCGATGTGTTGCGTGAAGCTTCAGAAAGTGAAAGATTAGAGCTGAGCCGAAAACTAGAGGACCGCTTTTTTAATGAAGAACGTCCATATGACAAACTAAGACTTGGATTGCCAGGATGGAAGTCCCGGTTCTACAGGGAATATTTCGGTATCGAAACTTCTAATGAAATTGGAAATCTTCAAAACGACATGGCTCAGAAGTATTTAGAAGGACTTTGTTGGATGCTTCAATACTATCTTGCGGACGTACCATCATGGAGCTGGTACTACCCATTCTATGTTGCTCCTTTCGTATCTGACCTCAAAAGTAATTGTCGGTTCGAGATATCTTTCACCGTAGACAAACCACTGCGACCATTTGATCAGCTCATGGCAGTTTTACCACTACGAAGTTCGTGTGCTCTCCCAGAATGTTACAGAAAAGTAATGGGCCGTAAAGAATTTGACCATCCGAAGTTGCAGGCTGACACAATTGGAAAACGTTTCTTGTGGAAATGTATCTCTGAGGAAGAACTGCTTCAGGCCACCAAAGAGTTAGATAAAGAGCTGTCGATGCATGAGATGAGACGGAATACTCCCCGGCAAGAGAAGATCTTTCTGCAGAGGAACTCAAATGCTCAGGCACTTGCCAAAGTTATTGTGCAACTGCAAACATCGTCATGTTCGCCGGAGCAAAAGCTTCCAATAGATTCAGCTATAAGTGGACTTGGAGGCTGGTTATCGCCTGATGGCTTGAGCAATGGTTTCTTTTGCTCACCCCTACAAAATCTGCAGGACATCACGAATGATCAGGCAATATCAGCGATGTTCTTCAACCCTGAGGCAGGGAATCCAATTCCAAGACTACTTAGCAATGTCAAAGTACATGACAAGACGGTTACGGAAGCTGACATCTCAAGGAGGCTGCTCTGGCACACGTACCCGGGCTCGAGGCCGCCACCGCCCATCGTTGAGAGGCCGGACACCATCTGGAAGCCGATCAGCAAGCCGTCGGCGCCACGGGA-GGAGCACAAGAACGCCGGAACCGGGTGGATGGGGCGGGGGAGAGGGAACGCCGCCCTTGCCGCCGCCGAGACGACGACGCAGCTCCTCACCGCCAGCAGCAGCAGCAGCAGCAGCTACGGGCATGGGGCTGCAGGCAGCCGCACTGCCGCCGAGACGCAACGGAGCAGCAGCAGCAGCAGCTCCAGGAGAGGTTCCCGTCGTGCGGACATGGTGGCGCCGCAAAGCCGCAACAGCAGGTTTGATGACAGCGACGGCGGCGCATACGGTTTCCGACCGCTTGGGATTGGGAGTGCGCCGTGGACAGGAGACGGCAGCGGTGGCGGCCATGGCCGCGGGAGAGCGCAGCCACGTGGTTGGTAGGACACTGGGCTCCCGGCTCCGGGAATTAGAGATGTACAGCCATACTGAGAGACGCAGAGGGGTTTTCCAGCTATCTTAATAAGGCAGTGGCCTAGACGACTTAGGTGGTATTTACGATATTTTTAAGATGTACAGCTGTACCACCTCAAGACTTTGCAAATGTTTCTAAATCCAGTATTCCAGGGGCCTCCCAAATATTTTGGCTGGCAAACAACTTGCCAATTAACTAGGCATTGTCCCGGGGTTATATTTT] [+] EMBL AK066344 [GATATCTCCTCATCCGATCCTCTTCTTGCTTCACCTGCTGCCCTCTGCTCCGGTCGATCGCTTGCATATTGCATATTTGCATGCAGAGCTGCCATGGGAATACCTTCTTTCTACAGGTGGCTCGTGAACAGATACCCAAGCATCGTCTCCCCGGCAAAGGAGAGCCGCCCTGCAGATGGCATCGTCGTCTACGACAACCTCTACCTCGACATGAATCAAATCATCCATTATTCCTTCCACCCGCAGGACCAGATGAACGCCGGCACAGATGTGTGCGCTCCGACGACGGTCAGCGAGGTTTTCGAGTCCATGTTCGACTACCTGGACCGCTTGTTTCGCATCGTCAGGCCGAGAAGGCTCCTCTACTTGGCAGTGGATGGGGTTGCTCCGTGCGCCAAAATGAACGGAATGCGAAGAGGACGACGTTTCGCCTGGGCGAGTGAAGAGGAGGAAATGCAGAAGATATCAGAAGGGGTCTCTGACCCCAATGTCATCACGCCAGGGACTGAATTCATGGAGAAGATATCGCAAGCGCTCACGTACTACATCCGTGCCAGATTGAATAGCAGTGATCCAGGGTGGAAACACATCATGGTAATACTCTCTGATGCAAATGTTCCTGGAGAAGGAGAGCACAAGATCATGTCTTTCATCCGTGCACAGCGCAGCATGGAAGGCTATGACCCCAACACACGACACTGCTTGTTTGGGCATGATGCGGATTTGATCATGCTTGCTTTGGCATCTCACGAAGTCCACTTCTCTATTTTGCGTGAGGATAATTCCCAGCTAACAGAAGCGGATCCAGAGAAACAATATCTGTTTTTGAACATATGGGTTCTGAGAGAGTACTTGGAGATTGAATTAAAGATACTGGACCCAGTTTGTGAGCCTGATATTGAGAGGCTGATTGATGACTTCATCTTCATTTGTTTCTTGATGGGAAACGATTTCATCCCCCACATTCCGTCGCTTGAGATGAAGGAGTATGCACTTGATCTTCTCATCGAGGTATACAAGACAACCTTCAACAAAATGGGAGGGTATATTGTCAACATAGAAAAGGTAAAAGATAAACATGCTGCATATCTGGAAGTCTCAAGGTTGGAAATATTTTTTCATCAACTGTCCATGTATGAAGAGAAAATTTTTCTAAAACGATACGAACTGGAACAGGAATCCCTGAAGAAGTCATGTCGCGATGTGTTGCGTGAAGCTTCAGAAAGTGAAAGATTAGAGCTGAGCCGAAAACTAGAGGACCGCTTTTTTAATGAAGAACGTCCATATGACAAACTAAGACTTGGATTGCCAGGATGGAAGTCCCGGTTCTACAGGGAATATTTCGGTATCGAAACTTCTAATGAAATTGGAAATCTTCAAAACGACATGGCTCAGAAGTATTTAGAAGGACTTTGTTGGATGCTTCAATACTATCTTGCGGACGTACCATCATGGAGCTGGTACTACCCATTCTATGTTGCTCCTTTCGTATCTGACCTCAAAAGTAATTGTCGGTTCGAGATATCTTTCACCGTAGACAAACCACTGCGACCATTTGATCAGCTCATGGCAGTTTTACCACTACGAAGTTCGTGTGCTCTCCCAGAATGTTACAGAAAAGTAATGGGCCGTAAAGAATTTGACCATCCGAAGTTGCAGGCTGACACAATTGGAAAACGTTTCTTGTGGAAATGTATCTCTGAGGAAGAACTGCTTCAGGCCACCAAAGAGTTAGATAAAGAGCTGTCGATGCATGAGATGAGACGGAATACTCCCCGGCAAGAGAAGATCTTTCTGCAGAGGAACTCAAATGCTCAGGCACTTGCCAAAGTTATTGTGCAACTGCAAACATCGTCATGTTCGCCGGAGCAAAAGCTTCCAATAGATTCAGCTATAAGTGGACTTGGAGGCTGGTTATCGCCTGATGGCTTGAGCAATGGTTTCTTTTGCTCACCCCTACAAAATCTGCAGGACATCACGAATGATCAGGCAATATCAGCGATGTTCTTCAACCCTGAGGCAGGGAATCCAATTCCAAGACTACTTAGCAATGTCAAAGTACATGACAAGACGGTTACGGAAGCTGACATCTCAAGGAGGCTGCTCTGGCACACGTACCCGGGCTCGAGGCCGCCACCGCCCATCGTTGAGAGGCCGGACACCATCTGGAAGCCGATCAGCAAGCCGTCGGCGCCACGGGA GGAGCACAAGAACGCCGGAACCGGGTGGATGGGGCGGGGGAGAGGGAACGCCGCCCTTGCCGCCGCCGAGACGACGACGCAGCTCCTCACCGCCAGCAGCAGCAGCAGCAGCAGCTACGGGCATGGGGCTGCAGGCAGCCGCACTGCCGCCGAGACGCAACGGAGCAGCAGCAGCAGCAGCTCCAGGAGAGGTTCCCGTCGTGCGGACATGGTGGCGCCGCAAAGCCGCAACAGCAGGTTTGATGACAGCGACGGCGGCGCATACGGTTTCCGACCGCTTGGGATTGGGAGTGCGCCGTGGACAGGAGACGGCAGCGGTGGCGGCCATGGCCGCGGGAGAGCGCAGCCACGTGGTTGGTAGGACACTGGGCTCCCGGCTCCGGGAATTAGAGATGTACAGCCATACTGAGAGACGCAGAGGGGTTTTCCAGCTATCTTAATAAGGCAGTGGCCTAGACGACTTAGGTGGTATTTACGATATTTTTAAGATGTACAGCTGTACCACCTCAAGACTTTGCAAATGTTTCTAAATCCAGTATTCCAGGGGCCTCCCAAATATTTTGGCTGGCAAACAACTTGCCAATTAACTAGGCATTGTCCCGGGGTTATATTTT] [+] EMBL C27116 [ GAGGAACTCAAATGCTCAGGCACTTGCCAAAGTTATTGTGCAACTGCAAACATCGTCATGTTCGCCGGAGCAAAAGCTTCCAATAGATTCAGCTATAAGTGGACTTGGAGGCTGGTTATCGCCTGATGGCTTGAGCAATGGTTTCTTTTGCTCACCCCTACAAAATCTGCAGGACATCACGAATGATCAGGCAATATCAGCGATGTTCTTCAACCCTGAGGCAGGGAATCCAATTCCAAGACTACTTAGCAATGTCAAAGTACCTGACAAGACGGTTACGGAAGCTGACATCTCAAGGAGGCTGCTCTGGCACACGTACCCTGGCTCGAGGCNGCCACCGCCCATCGTTGAGAGGCCNGACACCATCTGGAAGCCGATCAGCAAGCCGTCGG TTCACGGGAGGGAGCAC AGGACGCCn ] consensusID : consensus_9782#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1039 fasta sequence [AGCTAGCCCGAAGTTATCATCAAACTGATATCTCCTCATCCGATCCTCTTCTTGCTTCACCTGCTGCCCTCTGCTCCGGTCGATCGCTTGCATATTGCATATTTGCATGCAGAGCTGCCATGGGAATACCTTCTTTCTACAGGTGGCTCGTGAACAGATACCCAAGCATCGTCTCCCCGGCAAAGGAGAGCCGCCCTGCAGATGGCATCGTCGTCTACGACAACCTCTACCTCGACATGAATCAAATCATCCATTATTCCTTCCACCCGCAGGACCAGATGAACGCCGGCACAGATGTGTGCGCTCCGACGACGGTCAGCGAGGTTTTCGAGTCCATGTTCGACTACCTGGACCGCTTGTTTCGCATCGTCAGGCCGAGAAGGCTCCTCTACTTGGCAGTGGGTTCGTCGTAGATGTACAGCAGATGGATCGTTGGATCGATTCTCTCGTCAAATTACTTAGTACCATATTGTCGTTTCAAGAATTAATCATGGATTTGTTTTTGTTGGTTGGCTTGGCTTCAATTATTTCTGCAGTTTATGTACTTCTTTTATTATTCTCTCTCACTGCACGCTCTCTTTTTTTTAAAAAAAAATGGTTTAATTCCATGTGCAGATGGGGTTGCTCCGTGCGCCAAAATGAACGGAATGCGAAGAGGACGACGTTTCGCCTGGGTAGCCAGAGTCAATCCTTTGCATTTATTTATTTTCTTGCATGTCGATCAGCTAGCTAGCTGCTGAAGCAATTGATCGGTCGAGAAAAAGGCATCCATGCTTTGGTTCAATTTTACAGGCGAGTGAAGAGGAGGAAATGCAGAAGATATCAGAAGGGGTCTCTGACCCCAATGTCATCACGCCAGGGACTGAATTCATGGAGAAGATATCGCAAGCGCTCACGTACTACATCCGTGCCAGATTGAATAGCAGTGATCCAGGGTGGAAACACATCATGGTTAATTAATTTTCTCTTGCACTTCTTCAGTATAAATGTACCTCGTATTCTTTCTTAATTTCCCGTTTTTTTTATCCAAGGAGAGTCC] [+] EMBL AK070782 [AGCTAGCCCGAAGTTATCATCAAACTGATATCTCCTCATCCGATCCTCTTCTTGCTTCACCTGCTGCCCTCTGCTCCGGTCGATCGCTTGCATATTGCATATTTGCATGCAGAGCTGCCATGGGAATACCTTCTTTCTACAGGTGGCTCGTGAACAGATACCCAAGCATCGTCTCCCCGGCAAAGGAGAGCCGCCCTGCAGATGGCATCGTCGTCTACGACAACCTCTACCTCGACATGAATCAAATCATCCATTATTCCTTCCACCCGCAGGACCAGATGAACGCCGGCACAGATGTGTGCGCTCCGACGACGGTCAGCGAGGTTTTCGAGTCCATGTTCGACTACCTGGACCGCTTGTTTCGCATCGTCAGGCCGAGAAGGCTCCTCTACTTGGCAGTGGGTTCGTCGTAGATGTACAGCAGATGGATCGTTGGATCGATTCTCTCGTCAAATTACTTAGTACCATATTGTCGTTTCAAGAATTAATCATGGATTTGTTTTTGTTGGTTGGCTTGGCTTCAATTATTTCTGCAGTTTATGTACTTCTTTTATTATTCTCTCTCACTGCACGCTCTCTTTTTTTTAAAAAAAAATGGTTTAATTCCATGTGCAGATGGGGTTGCTCCGTGCGCCAAAATGAACGGAATGCGAAGAGGACGACGTTTCGCCTGGGTAGCCAGAGTCAATCCTTTGCATTTATTTATTTTCTTGCATGTCGATCAGCTAGCTAGCTGCTGAAGCAATTGATCGGTCGAGAAAAAGGCATCCATGCTTTGGTTCAATTTTACAGGCGAGTGAAGAGGAGGAAATGCAGAAGATATCAGAAGGGGTCTCTGACCCCAATGTCATCACGCCAGGGACTGAATTCATGGAGAAGATATCGCAAGCGCTCACGTACTACATCCGTGCCAGATTGAATAGCAGTGATCCAGGGTGGAAACACATCATGGTTAATTAATTTTCTCTTGCACTTCTTCAGTATAAATGTACCTCGTATTCTTTCTTAATTTCCCGTTTTTTTTATCCAAGGAGAGTCC] consensusID : consensus_9782#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 744 fasta sequence [GAAGAAC-TTAAATGGGAGTTGATTGATAAGATGGGCAATATATTCTAGTGTGACAATCTTTAGAGAAAATCTTTTCAAACGAAGATAGCATTTGCCTATTACTTCCTCAATCCCATAATAATAAGGGATTATATTTTATTTCTTGCGAAAACTAAAGAAGTAGCAAAAGGACAAGTCAAGCTACAAAATGTAGTATTTGGGGGAATAAACTACTAGAAAAATTTGGATATAATTTTGAATTAAATATATGATCGATTGTTAGGGCTTTATCCAATATCCAGGATAACTAATACTACATTATATTAAAATGTACTCAATTTTAAAAATATCAAACATGCATTTTCGAAATAAAAAAAATATGGTTGTCAAATTTCACACCACATTAACACTACGCGGGCATAATCCTTCTTGGTTTTTCCTTTTTTTTTTGACCGAATGAAGCATCATCCTTATCATTATAATCTCCCCCTCCTCTTTTCTTTCTCCCTTTGAATTTAGGCTCAGAAGTATTTAGAAGGACTTTGTTGGATGCTTCAATACTATCTTGCGGACGTACCATCATGGAGCTGGTACTACCCATTCTATGTTGCTCCTTTCGTATCTGACCTCAAAAGTAATTGTCGGTTCGAGATATCTTTCACCGTAGACAAACCACTGCGACCATTTGATCAGCTCATGGCAGTTTTACCACTACGAAGTTCGTGTGCTCTCCCAGAATGTTACAGAAAAGTAATGGGCCGTAAA] [+] EMBL CB652713 [GAAGAAC TTAAATGGGAGTTGATTGATAAGATGGGCAATATATTCTAGTGTGACAATCTTTAGAGAAAATCTTTTCAAACGAAGATAGCATTTGCCTATTACTTCCTCAATCCCATAATAATAAGGGATTATATTTTATTTCTTGCGAAAACTAAAGAAGTAGCAAAAGGACAAGTCAAGCTACAAAATGTAGTATTTGGGGGAATAAACTACTAGAAAAATTTGGATATAATTTTGAATTAAATATATGATCGATTGTTAGGGCTTTATCCAATATCCAGGATAACTAATACTACATTATATTAAAATGTACTCAATTTTAAAAATATCAAACATGCATTTTCGAAATAAAAAAAATATGGTTGTCAAATTTCACACCACATTAACACTACGCGGGCATAATCCTTCTTGGTTTTTCCTTTTTTTTTTGACCGAATGAAGCATCATCCTTATCATTATAATCTCCCCCTCCTCTTTTCTTTCTCCCTTTGAATTTAGGCTCAGAAGTATTTAGAAGGACTTTGTTGGATGCTTCAATACTATCTTGCGGACGTACCATCATGGAGCTGGTACTACCCATTCTATGTTGCTCCTTTCGTATCTGACCTCAAAAGTAATTGTCGGTTCGAGATATCTTTCACCGTAGACAAACCACTGCGACCATTTGATCAGCTCATGGCAGTTTTACCACTACGAAGTTCGTGTGCTCTCCCAGAATGTTACAGAAAAGTAATGGGCCGTAAA] [+] EMBL CB652712 [GAAGAACTTTAAATGGGAGTTGATTGATAAGATGGGCAATATATTCTAGTGTGACAATCTTTAGAGAAAATCTTTTCAAACGAAGATAGCATTTGCCTATTACTTCCTCAATCCCATAATAATAAGGGATTATATTTTATTTCTTGCGAAAACTAAAGAAGTAGCAAAAGGACAAGTCAAGCTACAAAATGTAGTATTTGGGGGAATAAACTACTAGAAAAATTTGGATATAATTTTGAATTAAATATATGATCGATTGTTAGGGCTTTATCCAATATCCAGGATAACTAATACTACATTATATTAAAATGTACTCAATTTTAAAAATATCAAACATGCATTTTCGAAATAAAAAAAATATGGTTGTCAAATTTCACACCACATTAACACTACGCGGGCATAATCCTTCTTGGTTTTTCCTTTTTTTTTTGACCGAATGAAGCATCATCCTTATCATTATAATCTCCCCCTCCTCTTTTCTTTCTCCCTTTGAATTTAGGCTCAGAAGTATTTAGAAGGACTTTGTTGGATGCTTCAATACTATCTTGCGGACGTACCATCATGGAGCTGGTACTACCCATTCTATGTTGCTCCTTTCGTATCTGACCTCAAAAGTAATTGTCGGTTCGAGATATCTTTCACCGTAGACAAACCACTGCGACCATTTGATCAGCTCATGGCAGTTTTACCACTACGAAGTTCGTGTGCTCTCCCAGAATGTTACAGAAAAGTA ] consensusID : consensus_9782#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 420 fasta sequence [TACAGGGCATGGGGCTGCAGGCAGCCAGCACTGCCGCCGAGACGCAACGGAGCAGCAGCAGCAGCAGCTCCAGGAGAGGTTCCCAGTCGTGCGGACATGGTGGCCCGCAAAGCCGCAACAGCAGGTTTGATGACAGCGACGCGGCGCATACGGTTTCCGACCGCTTGGGATTGGGAGTGCGCCGTGGACAGGAGACGGCAGCGGTGGCGGCCATGCCGCGGGAGTGCGCAGCCACGTGGTTGGTAGGACACTGGGCTCCCGGCTCCGGGAATTAGAGATGTACAGCCATACTGAGAGACGCAGAGGGGCTTTCCAGCTATCTTAATAAGATGTACAGCTGTACCACCTCAAGACTTTGCAAATGTTTCTAAATCCAGTATTCCAGGGGCCTCCCAAATATTTTGGCTGGCAAAAAAAAAA] [+] EMBL BI813627 [TACAGGGCATGGGGCTGCAGGCAGCCAGCACTGCCGCCGAGACGCAACGGAGCAGCAGCAGCAGCAGCTCCAGGAGAGGTTCCCAGTCGTGCGGACATGGTGGCCCGCAAAGCCGCAACAGCAGGTTTGATGACAGCGACGCGGCGCATACGGTTTCCGACCGCTTGGGATTGGGAGTGCGCCGTGGACAGGAGACGGCAGCGGTGGCGGCCATGCCGCGGGAGTGCGCAGCCACGTGGTTGGTAGGACACTGGGCTCCCGGCTCCGGGAATTAGAGATGTACAGCCATACTGAGAGACGCAGAGGGGCTTTCCAGCTATCTTAATAAGATGTACAGCTGTACCACCTCAAGACTTTGCAAATGTTTCTAAATCCAGTATTCCAGGGGCCTCCCAAATATTTTGGCTGGCAAAAAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9782#0 GATATCTCCTCATCCGATCCTCTTCTTGCTTCACCTGCTGCCCTCTGCTCCGGTCGATCG 60 consensus_9782#3 ------------------------------------------------------------ consensus_9782#1 ------------------------------------------------------------ consensus_9782#2 ------------------------------------------------------------ consensus_9782#0 CTTGCATATTGCATATTTGCATGCAGAGCTGCCATGGGAATACCTTCTTTCTACAGGTGG 120 consensus_9782#3 ------------------------------------------------------------ consensus_9782#1 ------------------------------------------------------------ consensus_9782#2 ------------------------------------------------------------ consensus_9782#0 CTCGTGAACAGATACCCAAGCATCGTCTCCCCGGCAAAGGAGAGCCGCCCTGCAGATGGC 180 consensus_9782#3 ------------------------------------------------------------ consensus_9782#1 ------------------------------------------------------------ consensus_9782#2 ------------------------------------------------------------ consensus_9782#0 ATCGTCGTCTACGACAACCTCTACCTCGACATGAATCAAATCATCCATTATTCCTTCCAC 240 consensus_9782#3 ------------------------------------------------------------ consensus_9782#1 ------------------------------------------------------------ consensus_9782#2 ------------------------------------------------------------ consensus_9782#0 CCGCAGGACCAGATGAACGCCGGCACAGATGTGTGCGCTCCGACGACGGTCAGCGAGGTT 300 consensus_9782#3 ------------------------------------------------------------ consensus_9782#1 ------------------------------------------------------------ consensus_9782#2 ------------------------------------------------------------ consensus_9782#0 TTCGAGTCCATGTTCGACTACCTGGACCGCTTGTTTCGCATCGTCAGGCCGAGAAGGCTC 360 consensus_9782#3 ------------------------------------------------------------ consensus_9782#1 ------------------------------------------------------------ consensus_9782#2 ------------------------------------------------------------ consensus_9782#0 CTCTACTTGGCAGTGGATGGGGTTGCTCCGTGCGCCAAAATGAACGGAATGCGAAGAGGA 420 consensus_9782#3 ------------------------------------------------------------ consensus_9782#1 ------------------------------------------------------------ consensus_9782#2 ------------------------------------------------------------ consensus_9782#0 CGACGTTTCGCCTGGGCGAGTGAAGAGGAGGAAATGCAGAAGATATCAGAAGGGGTCTCT 480 consensus_9782#3 ------------------------------------------------------------ consensus_9782#1 ------------------------------------------------------------ consensus_9782#2 ------------------------------------------------------------ consensus_9782#0 GACCCCAATGTCATCACGCCAGGGACTGAATTCATGGAGAAGATATCGCAAGCGCTCACG 540 consensus_9782#3 ------------------------------------------------------------ consensus_9782#1 ------------------------------------------------------------ consensus_9782#2 ------------------------------------------------------------ consensus_9782#0 TACTACATCCGTGCCAGATTGAATAGCAGTGATCCAGGGTGGAAACACATCATGGTAATA 600 consensus_9782#3 ------------------------------------------------------------ consensus_9782#1 ------------------------------------------------------------ consensus_9782#2 ------------------------------------------------------------ consensus_9782#0 CTCTCTGATGCAAATGTTCCTGGAGAAGGAGAGCACAAGATCATGTCTTTCATCCGTGCA 660 consensus_9782#3 ------------------------------------------------------------ consensus_9782#1 ------------------------------------------------------------ consensus_9782#2 ------------------------------------------------------------ consensus_9782#0 CAGCGCAGCATGGAAGGCTATGACCCCAACACACGACACTGCTTGTTTGGGCATGATGCG 720 consensus_9782#3 ------------------------------------------------------------ consensus_9782#1 ------------------------------------------------------------ consensus_9782#2 ------------------------------------------------------------ consensus_9782#0 GATTTGATCATGCTTGCTTTGGCATCTCACGAAGTCCACTTCTCTATTTTGCGTGAGGAT 780 consensus_9782#3 ------------------------------------------------------------ consensus_9782#1 ------------------------------------------------------------ consensus_9782#2 ------------------------------------------------------------ consensus_9782#0 AATTCCCAGCTAACAGAAGCGGATCCAGAGAAACAATATCTGTTTTTGAACATATGGGTT 840 consensus_9782#3 ------------------------------------------------------------ consensus_9782#1 ------------------------------------------------------------ consensus_9782#2 ------------------------------------------------------------ consensus_9782#0 CTGAGAGAGTACTTGGAGATTGAATTAAAGATACTGGACCCAGTTTGTGAGCCTGATATT 900 consensus_9782#3 ------------------------------------------------------------ consensus_9782#1 ------------------------------------------------------------ consensus_9782#2 ------------------------------------------------------------ consensus_9782#0 GAGAGGCTGATTGATGACTTCATCTTCATTTGTTTCTTGATGGGAAACGATTTCATCCCC 960 consensus_9782#3 ------------------------------------------------------------ consensus_9782#1 ------------------------------------------------------------ consensus_9782#2 ------------------------------------------------------------ consensus_9782#0 CACATTCCGTCGCTTGAGATGAAGGAGTATGCACTTGATCTTCTCATCGAGGTATACAAG 1020 consensus_9782#3 ------------------------------------------------------------ consensus_9782#1 ------------------------------------------------------------ consensus_9782#2 ------------------------------------------------------------ consensus_9782#0 ACAACCTTCAACAAAATGGGAGGGTATATTGTCAACATAGAAAAGGTAAAAGATAAACAT 1080 consensus_9782#3 ------------------------------------------------------------ consensus_9782#1 ------------------------------------------------------------ consensus_9782#2 ------------------------------------------------------------ consensus_9782#0 GCTGCATATCTGGAAGTCTCAAGGTTGGAAATATTTTTTCATCAACTGTCCATGTATGAA 1140 consensus_9782#3 ------------------------------------------------------------ consensus_9782#1 ------------------------------------------------------------ consensus_9782#2 ------------------------------------------------------------ consensus_9782#0 GAGAAAATTTTTCTAAAACGATACGAACTGGAACAGGAATCCCTGAAGAAGTCATGTCGC 1200 consensus_9782#3 ------------------------------------------------------------ consensus_9782#1 ------------------------------------------------------------ consensus_9782#2 ------------------------------------------------------------ consensus_9782#0 GATGTGTTGCGTGAAGCTTCAGAAAGTGAAAGATTAGAGCTGAGCCGAAAACTAGAGGAC 1260 consensus_9782#3 ------------------------------------------------------------ consensus_9782#1 ------------------------------------------------------------ consensus_9782#2 ------------------------------------------------------------ consensus_9782#0 CGCTTTTTTAATGAAGAACGTCCATATGACAAACTAAGACTTGGATTGCCAGGATGGAAG 1320 consensus_9782#3 ------------------------------------------------------------ consensus_9782#1 ------------------------------------------------------------ consensus_9782#2 ------------------------------------------------------------ consensus_9782#0 TCCCGGTTCTACAGGGAATATTTCGGTATCGAAACTTCTAATGAAATTGGAAATCTTCAA 1380 consensus_9782#3 ------------------------------------------------------------ consensus_9782#1 ------------------------------------------------------------ consensus_9782#2 ------------------------------------------------------------ consensus_9782#0 AACGACATGGCTCAGAAGTATTTAGAAGGACTTTGTTGGATGCTTCAATACTATCTTGCG 1440 consensus_9782#3 ------------------------------------------------------------ consensus_9782#1 ------------------------------------------------------------ consensus_9782#2 ------------------------------------------------------------ consensus_9782#0 GACGTACCATCATGGAGCTGGTACTACCCATTCTATGTTGCTCCTTTCGTATCTGACCTC 1500 consensus_9782#3 ------------------------------------------------------------ consensus_9782#1 ------------------------------------------------------------ consensus_9782#2 ------------------------------------------------------------ consensus_9782#0 AAAAGTAATTGTCGGTTCGAGATATCTTTCACCGTAGACAAACCACTGCGACCATTTGAT 1560 consensus_9782#3 ------------------------------------------------------------ consensus_9782#1 ------------------------------------------------------------ consensus_9782#2 ------------------------------------------------------------ consensus_9782#0 CAGCTCATGGCAGTTTTACCACTACGAAGTTCGTGTGCTCTCCCAGAATGTTACAGAAAA 1620 consensus_9782#3 ------------------------------------------------------------ consensus_9782#1 ------------------------------------------------------------ consensus_9782#2 ------------------------------------------------------------ consensus_9782#0 GTAATGGGCCGTAAAGAATTTGACCATCCGAAGTTGCAGGCTGACACAATTGGAAAACGT 1680 consensus_9782#3 ------------------------------------------------------------ consensus_9782#1 ------------------------------------------------------------ consensus_9782#2 ------------------------------------------------------------ consensus_9782#0 TTCTTGTGGAAATGTATCTCTGAGGAAGAACTGCTTCAGGCCACCAAAGAGTTAGATAAA 1740 consensus_9782#3 ------------------------------------------------------------ consensus_9782#1 ------------------------------------------------------------ consensus_9782#2 ------------------------------------------------------------ consensus_9782#0 GAGCTGTCGATGCATGAGATGAGACGGAATACTCCCCGGCAAGAGAAGATCTTTCTGCAG 1800 consensus_9782#3 ------------------------------------------------------------ consensus_9782#1 ---------------------------------------------AGCTAGCCCGAAGTT 15 consensus_9782#2 ------------------------------------------------------------ consensus_9782#0 AGGAACTCAAATGCTCAGGCACTTGCCAAAGTTATTGTGCAACTGCAAACATCGTCATGT 1860 consensus_9782#3 ------------------------------------------------------------ consensus_9782#1 ATCATCAAACTGATATCTCCTCATCCGATCCTCTTCTTGCTTCACCTGCTGCCCTCTGCT 75 consensus_9782#2 ------------------------------------------------------------ consensus_9782#0 TCGCCGGAGCAAAAGCTTCCAATAGATTCAGCTATAAGTGGACTTGGAGGCTGGTTATCG 1920 consensus_9782#3 ------------------------------------------------------------ consensus_9782#1 CCGGTCGATCGCTTGCATATTGCATATTTGCATGCAGAGCTGCCATGGGAATACCTTCTT 135 consensus_9782#2 ------------------------------------------------------------ consensus_9782#0 CCTGATGGCTTGAGCAATGGTTTCTTTTGCTCACCCCTACAAAATCTGCAGGACATCACG 1980 consensus_9782#3 ------------------------------------------------------------ consensus_9782#1 TCTACAGGTGGCTCGTGAACAGATACCCAAGCATCGTCTCCCCGGCAAAGGAGAGCCGCC 195 consensus_9782#2 ------------------------------------------------------------ consensus_9782#0 AATGATCAGGCAATATCAGCGATGTTCTTCAACCCTGAGGCAGGGAATCCAATTCCAAGA 2040 consensus_9782#3 ------------------------------------------------------------ consensus_9782#1 CTGCAGATGGCATCGTCGTCTACGACAACCTCTACCTCGACATGAATCAAATCATCCATT 255 consensus_9782#2 ------------------------------------------------------------ consensus_9782#0 CTACTTAGCAATGTCAAAGTACATGACAAGACGGTTACGGAAGCTGACATCTCAAGGAGG 2100 consensus_9782#3 ------------------------------------------------------------ consensus_9782#1 ATTCCTTCCACCCGCAGGACCAGATGAACGCCGGCACAGATGTGTGCGCTCCGACGACGG 315 consensus_9782#2 ------------GAAGAACTTAAATGGGAGTTGATTGATAAGATGGGCAATATATTCTAG 48 consensus_9782#0 CTGCTCTGGCACACGTACCCGGGCTCGAGGCCGCCACCGCCCATCGTTGAGAGGCCGGAC 2160 consensus_9782#3 ------------------------------------------------------------ consensus_9782#1 TCAGCGAGGTTTTCGAGTCCATGTTCGACTACCTGGACCGCTTGTTTCGCATCGTCAGGC 375 consensus_9782#2 TGTGACAATCTTTAGAGAAAATCTTTTCAAACGAAGATAGCAT-TTGCCTATTACTTCCT 107 consensus_9782#0 ACCATCTGGAAGCCGATCAGCAAGCCGTCGGCGCCACGGGAGGAGCACAAGAACGCCGGA 2220 consensus_9782#3 ------------------------------------------------------------ consensus_9782#1 CGAGAAGGCTCCTCTACTTGGCAGTGGGTTCGTCGTAGATGTACAGCAGATGGATCGTTG 435 consensus_9782#2 CAA------TCCCATAATAATAAGGGATTATATTTTATTTCTTGCGAAAACTAAAGAAGT 161 consensus_9782#0 ACCGGGTGGATGGGGCGGGGGAGAGGGAACGCCGCCCTTGCCGCCGCCGAGACGACGACG 2280 consensus_9782#3 ------------------------------------------------------------ consensus_9782#1 GATCGATTCTCTCGTCAAATTACTTAGTACCATATTGTCGTTTCAAGAATTAATCATGGA 495 consensus_9782#2 AGCAAAAGGACAAGTCAAGCTACAAAATGTAGTATT-----TGGGGGAATAAACTACTAG 216 consensus_9782#0 CAGCTCCTCACCGCCAGCAGCAGCAGCAGCAGCAGCTAC-GGGCATGGGGCT-----GCA 2334 consensus_9782#3 ------------------------------------TACAGGGCATGGGGCT-----GCA 19 consensus_9782#1 TTTGTTTTTGTTGGTTGGCTTGGCTTCAATTATTTCTGCAGTTTATGTACTTCTTTTATT 555 consensus_9782#2 AAAAATTTGGATA--TAATTTTGAATTAAATATATGATCGATTGTTAGGGCT--TTATCC 272 * * * consensus_9782#0 GGCAGCC-GCACTGC-CGC---CGAGACGCAACGGAGCAGCAGC--AGCAGCAGCTCCAG 2387 consensus_9782#3 GGCAGCCAGCACTGC-CGC---CGAGACGCAACGGAGCAGCAGC--AGCAGCAGCTCCAG 73 consensus_9782#1 ATTCTCTCTCACTGCACGCTCTCTTTTTTTTAAAAAAAAATGGTTTAATTCCATGTGCAG 615 consensus_9782#2 AATATCCAGGATAACTAATA--CTACATTATATTAAAATGTACTC-AATTTTAAAAATAT 329 * * * * * * * * * consensus_9782#0 GAGAGGTTCCC-GTCGTGCGGACATGGTGGCGCCGCAAAGCCG-CAACAGCAGGTTTG-A 2444 consensus_9782#3 GAGAGGTTCCCAGTCGTGCGGACATGGTGGC-CCGCAAAGCCG-CAACAGCAGGTTTG-A 130 consensus_9782#1 ATGGGGTTGCTCCGTGCGCCAAAATGAACGGAATGCGAAGAGGACGACGTTTCGCCTG-G 674 consensus_9782#2 CAAACATGCATTTTCGAAATAAAAAAAATATGGTTGTCAAATT-TCACACCACATTAACA 388 * * * * * ** consensus_9782#0 TGA--CAGCGACGG--CGGCGCATACG---GTTTCCGACCGCTTGGGATTGGGAGTGCGC 2497 consensus_9782#3 TGA--CAGCGACG---CGGCGCATACG---GTTTCCGACCGCTTGGGATTGGGAGTGCGC 182 consensus_9782#1 GTAGCCAGAGTCAATCCTTTGCATTTATTTATTTTCTTGCATGTCGATCAGCTAGCTAGC 734 consensus_9782#2 CTACGCGGGCATAATCCTTCTTGGTTT----TTCCTTTTTTTTTTGACCGAATGAAGCAT 444 * * * * ** * * consensus_9782#0 CGTGGA--CAGGAGA-CGGCAGCGGT---GGCGGCCATGGCC--GCGGGAGAGCGCAGCC 2549 consensus_9782#3 CGTGGA--CAGGAGA-CGGCAGCGGT---GGCGGCCATG-CC--GCGGGAGTGCGCAGCC 233 consensus_9782#1 TGCTGAAGCAATTGATCGGTCGAGAAAAAGGCATCCATGCTTTGGTTCAATTTTACAGGC 794 consensus_9782#2 CATCCTTATCATTATAATCTCCCCCTCCTCTTTTCTTTCTCCCTTTGAATTTAGGCTCAG 504 * * * consensus_9782#0 ACGTGGTTGGTAGGACACT----GGGCTCCC------GGCTCCGGGAATTAGAGATGTAC 2599 consensus_9782#3 ACGTGGTTGGTAGGACACT----GGGCTCCC------GGCTCCGGGAATTAGAGATGTAC 283 consensus_9782#1 GAGTGAAGAGGAGGAAATGCA-GAAGATATCAGAAGGGGTCTCTGACCCCAATGTCATCA 853 consensus_9782#2 AAGTATTTAGAAGGACTTTGTTGGATGCTTCAATACTATCTTGCGGACGTACCATCATGG 564 ** * **** * * * * consensus_9782#0 AGCCAT--ACTGAGAG-ACGCAGAGGGGTTTTCCAGCTATCT--TAATAAGGCAGTGGCC 2654 consensus_9782#3 AGCCAT--ACTGAGAG-ACGCAGAGGGGCTTTCCAGCTATCT--TAATAAG--------- 329 consensus_9782#1 CGCCAGGGACTGAATTCATGGAGAAGATATCGCAAGCGCTCACGTACTACATCCGTGCCA 913 consensus_9782#2 AGCTGGT-ACTACCCATTCTATGTTGCTCCTTTCGTATCTGACCTCAAAAGTAATTGTCG 623 ** *** * * * * * consensus_9782#0 TAGACGACTTAGGTGGTATTTACGATATTTTTAAGATGTACAGCTGTACCACCTCAAGAC 2714 consensus_9782#3 -----------------------------------ATGTACAGCTGTACCACCTCAAGAC 354 consensus_9782#1 GATTGAATAGCAGTGATCCAGGGTGGAAACACATCATGGTTAATTAATTTTCTCTTGCAC 973 consensus_9782#2 GTTCGAGATATCTTTCACCGTAGACAAACCAC--TGCGACCATTTGATCAGCTCATGGCA 681 * * * * consensus_9782#0 TTTGCAAATGTTTCTAAATCCAGTATTCCAGG--GGCCTCCCAAATATTTTGGCTGGCAA 2772 consensus_9782#3 TTTGCAAATGTTTCTAAATCCAGTATTCCAGG--GGCCTCCCAAATATTTTGGCTGGCAA 412 consensus_9782#1 TTCTTCAGTATAAATGTACCTCGTATTCTTTCTTAATTTCCCGTTTTTTTTATCCAAGGA 1033 consensus_9782#2 GTTTTACCACTACGAAGTTCGTGTGCTCTCCCAGAATGTTACAGAAAAGTAATGGGCCGT 741 * * * ** ** * * * consensus_9782#0 ACAACTTGCCAATTAACTAGGCATTGTCCCGGGGTTATATTTT 2815 consensus_9782#3 AAAAAAAA----------------------------------- 420 consensus_9782#1 GAGTCC------------------------------------- 1039 consensus_9782#2 AAA---------------------------------------- 744 |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||