These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9836#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 2307 fasta sequence [AGGCGGGCCGCCTGGCGGCGGAGTACCTGGTGGCGAAGGGCGTGCTGCCGCCGGCCTCCCTGCAGCGCCGCGGCGTCGGCGGCGGGGGATGGGTCCAGCTCCCGCCTCCGCCCCCGCCACCTCCGCCGCCGCAGGGAACCCTGGCGTTCTATGGTGCCCAGAATGGCCGGCGGCGGTTGGATGATGATGATGATGGTAATCCTAACCCCCGCTCGCGGCGGAACCGCGGTGGTGAGAACAATAATGATGACAGTAGTAGTAGCTACAATGGTAGAGGGAAGAGGAAATTCGGTGCTTACAGTAGGCATTCGGATTGGGGGAGGGACAAGGGGAGGAGTAGGGGGAATTCGGATAGCCGGAGTTACGATGATGAGGATGATGACGGGCCTCCTGGTTATAGGAGAGAGCGGCGAGGTGGTGGGAGATTTGATGATGCTGGGAGTAGCATGTCGGGGGTGGCAGCGTCTAATACGGAGGCCATGGGGGAGTCGGAGCTGGAGGATACTGGGTCGAAGGTGGGCTCTAGCACTAATTTCAGGAAGGATGTCGATCCGCCACAATAAGTGGAGGGCGTTGATAAGTTGAATAAGATTAATGAGGAGAGTAATCCATCATATTCAGAGGTGGTGGAGCAAATGACTAATGGTGAGAGCACTAGGAATAGTGCTTCTTGTATTGTTATTGATGAGGAACAGACGAAGGCAAAATATTTGCCTGTGCCCTCAGATGACAAGGTTTCAGATGAGAAGCCTGACGATAGTAGTGTTTTGAATGAGAAGATTGAAGATGACGAGACTTTAGCTGAGAAAGCTGAAGATGATAAGACTTCTGATGAGAGGGTACCAGGTGTGAAGAATAACTTGCGTGATGATTGTAATAATTTGCTGAGCTATTGCAGTTATCCAAATGTACCGACAAGGCGGCGATCAATAGTTGCACACAGGAATGCAGCACCAGCCCATAGGGAAGTTGCTGTTGCCGAACAGATTGATCTGGTTTCCTCTGAGGATGAAACCCATATGGCCACTGATGTTACAGGGCATGGCAGCTCCTTGACTAATACCCAGGAAGGCAACAAAGATGGCCTTGCCTGCTTGGAACATACCGATACAAGCACTACTTGCAATCAGATGGTGGAGCCAGTAAGATTCCAGACAGAGGAAACACAGATTGGAACTGATGATTTGAGAGGACAGAAAAACATTGAGCAACATTATGCAGTTCACGAATCTAGGGAGGAGAATATGTTACCTCCTAAA-GNGGGTGTTCAGCAGCAAGTTGAGGAAGGAATGCAGATTTACAATGNTGATACACCGNCACAAGATGAAGACTTGATTGCTTCAGCTGATAAAGAGAAAGTAGCTGGTGTGGCATTATTACCTAGTATCAAAGCTGAAGCTGTTGTTGCGAAGGAAGAGGACAAGTTTGGTCAGTCAAGTTCATTTAAAATATGTGATCTAAACCTAGTTGGTAGTCCAGAGGTTGCTGAATTACGAAATGATCCTGGTTTGGGTCAATTCTCAACTGCTGGATGTTCAATGGAGCCACAAAATCAGCAACAAGAGTTTAGAAATACGGGTAACAGTGCAGATGATACCAACATGCATGCCCAAATTCCATTGCACAATAAGGTGGTTCAAGTTATTGATCTTGAAGATGACTCGCCAATTGAAGCTGGTGCATGTGATACTTCAAAAGCAAAAGAGGAAAACATGGCAAACCCTGCTGTGACCACAGATGTTCTTCCTGGTATCCAAGATGGATATAATTTTGCGATTTCAGATTATCTTGGTGCTGATATACCATGCTACCAACCAATGCAAACAGATCTTCCCAATGGGATGAGCCTAAATGATTCAGAGGGCATTACTGTCATGGATGATTCAATATATGGTTCTCTTAGCGATATCGGTTTTATGGAGGTTTGGGACCAGCAACCTCAGGACTACGAGAAGTTCTTCTGACCAGGCGCCAAATTGCTGTTGTCAGTGCTGTGACAGTTCTGTAACCCTGTAACTGCAATAATCAGAAAAACACACACACACAACACACATACAGGCACCCATGGTGGCCATATGATCCAGGCCAATGTCCTGTCTAACTACACATCATATATAGCTGGAGCCTTTGATCCTTCCAGGTCAATATCAACAGAGCATTCATCCTAAAAAGGATTGTTCTTGTGTAAACAGTTCGACAAGTTCATGTACCGTGAATACAATTTACTCTACAACTCTAGATATAAATACATTGTTTCACCTCGGAAAGGAAAATAAGAATACATTGTTTGATTA------AAAAAAAAGAAAA] [+] EMBL CB659610 [AGGCGGGCCGCCTGGCGGCGGAGTACCTGGTGGCGAAGGGCGTGCTGCCGCCGGCCTCCCTGCAGCGCCGCGGCGTCGGCGGCGGGGGATGGGTCCAGCTCCCGCCTCCGCCCCCGCCACCTCCGCCGCCGCAGGGAACCCTGGCGTTCTATGGTGCCCAGAATGGCCGGCGGCGGTTGGATGATGATGATGATGGTAATCCTAACCCCCGCTCGCGGCGGAACCGCGGTGGTGAGAACAATAATGATGACAGTAGTAGTAGCTACAATGGTAGAGGGAAGAGGAAATTCGGTGCTTACAGTAGGCATTCGGATTGGGGGAGGGACAAGGGGAGGAGTAGGGGGAATTCGGATAGCCGGAGTTACGATGATGAGGATGATGACGGGCCTCCTGGTTATAGGAGAGAGCGGCGAGGTGGTGGGAGATTTGATGATGCTGGGAGTAGCATGTCGGGGGTGGCAGCGTCTAATACGGAGGCCATGGGGGAGTCGGAGCTGGAGGATACTGGGTCGAAGGTGGGCTCTAGCACTAATTTCAGGAAGGATGTCGATCCGCCACAATAAGTGGAGGGCGTTGATAAGTTGAATAAGATTAATGAGGAGAGTAATCCATCATATTCAGAGGTGGTGGAGCAAATGACTAATGGTGAGAGCACTAGGAATAGTGCTTCTTGTA ] [+] EMBL CA765638 [ agggGGTGGTGGAGCAAATGACTAATGGTGAGAGCACTAGTAATAATGCTTCTTGTATTGTTATTGATGAGGAACAGACGAAGGCAAAATATTTGCCTGTGCCCTCAGATGACAAGGTTTCAGATGAGAAGCCTGACGATAGTAGTGTTTTGAATGAGAAGATTGAAGATGACGAGACTTTAGCTGAGAAAGCTGAAGATGATAAGACTTCTGATGAGAGGGTACCAGGTGTGAAGAATAACTTGCGTGATGATTGTAATAATTTGCTGAGCTATTGCAGTTATCCAAATGTACCGACAAGGCGGCGATCAATAGTTGCACACAGGAATGCAGCACCAGCCCATAGGGAAGTTGCTGTTGCCGAACAGATTGATCTGGTTTCCTCTGAGGATGAAACCCATATGGCCACTGATGTTACAGGGCATGGCAGCTCCTTGACTAATACCCAGGAAGGCAACAAAGATGGCCTTGCCTGCTTGGAACATACCGATACAAGCACTACTTGCAATCAGATGGTGGAGCCAGTAAGATTCCAGACAGAGGAAACACAGATTGGAACTGATGATTTGAGAGGACAGAAAAACATTGAGCAACATTATGCAGTTCACGAATCTAGGGAGGAGAATATGTTACCTCCTAAAGGNGGGTGTTCAGCAGCAAGTTGAGGAAGGAATGCAGATTTACAATGNTGATACACCGNCACAAGATGAAGACTTGATTGCTTC ] [+] EMBL AK111961 [ AACATTGAGCAACATTATGCAGTTCACGAATCTAGGGAGGAGAATATGTTACCTCCTAAA GTGGGTGTTCAGCAGCAAGTTGAGGAAGGAATGCAGATTTACAATGTTGATACACCGCCACAAGATGAAGACTTGATTGCTTCAGCTGATAAAGAGAAAGTAGCTGGTGTGGCATTATTACCTAGTATCAAAGCTGAAGCTGTTGTTGCGAAGGAAGAGGACAAGTTTGGTCAGTCAAGTTCATTTAAAATATGTGATCTAAACCTAGTTGGTAGTCCAGAGGTTGCTGAATTACGAAATGATCCTGGTTTGGGTCAATTCTCAACTGCTGGATGTTCAATGGAGCCACAAAATCAGCAACAAGAGTTTAGAAATACGGGTAACAGTGCAGATGATACCAACATGCATGCCCAAATTCCATTGCACAATAAGGTGGTTCAAGTTATTGATCTTGAAGATGACTCGCCAATTGAAGCTGGTGCATGTGATACTTCAAAAGCAAAAGAGGAAAACATGGCAAACCCTGCTGTGACCACAGATGTTCTTCCTGGTATCCAAGATGGATATAATTTTGCGATTTCAGATTATCTTGGTGCTGATATACCATGCTACCAACCAATGCAAACAGATCTTCCCAATGGGATGAGCCTAAATGATTCAGAGGGCATTACTGTCATGGATGATTCAATATATGGTTCTCTTAGCGATATCGGTTTTATGGAGGTTTGGGACCAGCAACCTCAGGACTACGAGAAGTTCTTCTGACCAGGCGCCAAATTGCTGTTGTCAGTGCTGTGACAGTTCTGTAACCCTGTAACTGCAATAATCAGAAAAACACACACACACAACACACATACAGGCACCCATGGTGGCCATATGATCCAGGCCAATGTCCTGTCTAACTACACATCATATATAGCTGGAGCCTTTGATCCTTCCAGGTCAATATCAACAGAGCATTCATCCTAAAAAGGATTGTTCTTGTGTAAACAGTTCGACAAGTTCATGTACCGTGAATACAATTTACTCTACAACTCTAGATATAAATACATTGTTTCACCTCGGAAAGGAAAATAAGAATACA ] [-] EMBL CB659611 [ TATGTGATCTAAACNTAGTTGGTAGTCCAGAGGTTGCTGAATTACGAAATGATCCTGGTTTGGGTCAATTCTCAACTGCTGGATGTTCAATGGAGCCACAAAATCAGCAACAAGAGTTTAGAAATACGGGTAACAGTGCAGATGATACCAACATGCATGCCCAAATTCCATTGCACAATAAGGTGGTTCAAGTTATTGATCTTGAAGATGACTCGCCAATTGAAGCTGGTGCATGTGATACTTCAAAAGCAAAAGAGGAAAACATGGCAAACCCTGCTGTGACCACAGATGTTCTTCCTGGTATCCAAGATGGATATAATTTTGCGATTTCAGATTATCTTGGTGCTGATATACCATGCTACCAACCAATGCAAACAGATCTTCCCAATGGGATGAGCCTAAATGATTCAGAGGGCATTACTGTCATGGATGATTCAATATATGGTTCTCTTAGCGATATCGGTTTTATGGAGGTTTGGGACCAGCAACCTCAGGACTACGAGAAGTTCTTCTGACCAGGCGCCAAATTGCTGTTGTCAGTGCTGTGACAGTTCTGTAACCCTGTAACTGCAATAATCAGAAAAACACACACACACAACACACATACAGGCACCCATGGTGGCCATATGATCCAGGCCAATGTCCTGTCTAACTACACATCATATATAGCTGGAGCCTTTGATCCTTCCAGGTCAATATCAACAGAGCATTCATCCTAAAAAGGATTGTTCTTGTGTAAACAGTTCGACAAGTTCATGTACCGTGAATACAATTTACTCTACAACTCTAGATATAAATACATTGTTTCACCTCGGAAAGGAAAATAAGAATACAT ] [+] EMBL BP184958 [ acgaggGTTCAATGGAGCCACAAAATCAGCAACAAGAGTTTAGAAATACGGGTAACAGTGCAGATGATACCAACATGCATGCCCAAATTCCATTGCACAATAAGGTGGTTCAAGTTATTGATCTTGAAGATGACTCGCCAATTGAAGCTGGTGCATGTGATACTTCAAAAGCAAAAGAGGAAAACATGGCAAACCCTGCTGTGACCACAGATGTTCTTCCTGGTATCCAAGATGGATATAATTTTGCGATTTCAGATTATCTTGGTGCTGATATACCATGCTACCAACCAATGCAAACAGATCTTCCCAATGGGATGAGCCTAAATGATTCAGAGGGCATTACTGTCATGGATGATTCAATATATGGTTCTCTTAGCGATATCGGTTTTATGGAGGTTTGGGACCAGCAACCTCAGGACTACGAGAAGTTCTTCTGACCAGGCGCCAAATTGCTGTTGTCAGTGCTGTGACAGTTCTGTAACCCTGTAACTGCAATAATCAGAAAAACACACACACACAACACACATACAGGCACCCATGGTGGCCATATGATCCAGGCCAATGTCCTGTCTAACTACACATCATATATAGCTGGAGCCTTTGATCCTTCCAGGTCAATATCAACAGAGCATTCATCCTAAAAAGG ] [-] EMBL CA760559 [ ATTGCATGGCGCAATAAGGTGGTTCAAGTTATTGATCTGAAAGATGACTCGCCAATTGAAGCTGGTGCATGTGAT CCTCAAAAGCAAAAGAGGAAAACATGGCAAACCCTGCTGTGACCACAGATGTTCTTCCTGGTATCCAAGATGGATATAATTNTGCGATTTCAGATTATCTTGGTGCTGATATACCATGCTACCAACCAATGCAAACAGATCTTCNCAATGGGATGAGCCTAAATGATTCAGAGGGCATTACTGTCATGGATGATTCAATATATGGTTCTCTTAGCGATATCGGTTTTATGGAGGTTTGGGACCAGCAACCTCAGGACTACGAGAAGTTCTTCTGACCAGGCGCCAAATTGCTGTTGTCAGTGCTGTGACAGTTCTGTAACCCTGTAACTGCAATAATCAGAAAAACACA NCACACAACACACATACAGGCACCCATGGTGGCCATATGATCCAGGCCAATGTCCTGTCTAACTACACATCATATATAGCTGGAGCCTTTGATCCTTCCAGGTCAATATCAACAGAGCATTCATCCTAAAAAGGATTGTCCTTGTGTAAACAGTTCGACAAGTTCATGTACCGTGAATACAATTTACTCTACAACTCTAGATATAAATACATTGTTTCACCTCGGAAAGGAAAATAAGAATACATTGTTTGATTA AAAAAAAAGAAAA] [+] EMBL BP184959 [ ACCACAGATGTTCTTCCTGGTATCCAAGATGGATATAATTTTGCGATTTCAGATTATCTTGGTGCTGATATACCATGCTACCAACCAATGCAAACAGATCTTCCCAATGGGATGAGCCTAAATGATTCAGAGGGCATTACTGTCATGGATGATTCAATATATGGTTCTCTTAGCGATATCGGTTTTATGGAGGTTTGGGACCAGCAACCTCAGGACTACGAGAAGTTCTTCTGACCAGGCGCCAAATTGCTGTTGTCAGTGCTGTGACAGTTCTGTAACCCTGTAACTGCAATAATCAGAAAAACACACACACACAACACACATACAGGCACCCATGGTGGCCATATGATCCAGGCCAATGTCCTGTCTAACTACACATCATATATAGCTGGAGCCTTTGATCCTTCCAGGTCAATATCAACAGAGCATTCATCCTAAAAAGGATTGTTCTTGTGTAAACAGTTCGACAAGTTCATGTACCGTGAATACAATTTACTCTACAACTCTAGATATAAATACATTGTTTCACCTCGGAAAGGAAAATAAGAATACATTGTTTGATTATCTGCTAAAAAAAAa ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||