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Oryza sativa
cluster # 985 cluster # 985       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_985#0 length = 1450 sequences # 2  

consensusID : consensus_985#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1450
fasta sequence
                              [CGCCCGCCGGTACAGATGATCCACCCCCGTTCGCAGCCTCCGGTCATTACTCATTACGGCCACGCGATCGTCGTGCTCCACCCTCAACAAACCCACGCAAGCGTCCGCGCATATCGATCCAGAATGACGTTATTGGCGATATAGATGCTAGATCGGGGAACGGCGGGGCAATCTTGCTGCTGTTTGAGACGCCATCGGGCTTTGCAATTTTCTCTTTTGATGGGATCCGCCTCATCGCACCAACTGCCATGGAGGATATCTGGCAAAACTTTGCCATGGAATATAGGGCAAAATTTGTAGTTTGGCGTCTTGCTTTTCAAGTTTTTACAGACAAGTCTCTGGCAATTAACTGTGATACTGGTGTGGACGATCAGCTTAATCTCATGATAACAAAGTACCACCGCAAAGGGGGGAAAATAGCTGTTGGGAAACCCGAATATAAAACAATCATAGAAGCAAACCTGGGTATTTCCTGTCTGTATGATGAATTTGTGATGGAGGTGATGTGGGGTTTGACGAATCTTATGCATAGTTTAGTCCCTGAAGAAAACTCTCAGCTGAGTAAGGAGGACCGTCTCCAGATGAGTCAAGGATTAAAAATGCTCCTGAATCGTTATGGATTTGATGTCAAACCAGGGATGGTTAACAAACGTATTCTTGAGGCAGCATCTGACTTGTATGATTGTGATGATTGTGAGAAGAAAAATAATTGGTCCTTGCGTCGTGCTGGTCGGAACCTTATGGATATCTCTAGCATTAACAGTGAGGATTGGGGCCTGTTGAAACTTTCTACAGCTCTGATGATAGTATGTTACCCTGAAGAAAAGATCATAGCATGCTTGCTGAAACATTCTACAGATTTGCTGATAGCATCTTACCCTAGAAGGGAAGTTATAGAATACAGTCAAAAGATGTTTTCACCAGATGTGCTATCTAAGCTGGTAACTGATGCACCAAAATATGGCATTTGGATAAAAAAGCGCACTTCCAAGAGAATCCATGAAGAAATGGTATTTTTGTATCAACAAAGGATTGAAAAGCGAAAGCTCTTGGCCACCTTGATAGGGGAGGCTACAAAGGTTTATGAAGCTGAACAAGCGGAATTGCTGACAAACTAGAAGTGACCACAGGTATTCTGAAGCTGCTATCTATGCCCAAGATGACTTCCAGTGATTTCCAGACCACCACTTCTTTTGTGTTTTGTTTATCTCAAGTTAAATTTGGGAATTACTGATATGATCAGTGTACTGTTTGGTTTCTACTTTAGACAAGTTAGACTGTGCTTCTCCAAGCTGCTATTTGTTTTGGTTTTGGTAGTATTGGTTTCTACTTTAGACAAGTCAGACTGTGTTTCTCCAAGCTGCTATTTGTTTTGGTTTTGGTAGTACTAGCTGAAGCGCACAATGCCGCGCTGCCCGGATCAATTGAAGTCCAGTATATATATACTATT]

[+] EMBL CF322669             [CGCCCGCCGGTACAGATGATCCACCCCCGTTCGCAGCCTCCGGTCATTACTCATTACGGCCACGCGATCGTCGTGCTCCACCCTCAACAAACCCACGCAAGCGTCCGCGCATATCGATCCAGAATGACGTTATTGGCGATATAGATGCTAGATCGGGGAACGGCGGGGCAATCTTGCTGCTGTTTGAGACGCCATCGGGCTTTGCAATTTTCTCTTTTGATGGGATCCGCCTCATCGCACCAACTGCCATGGAGGATATCTGGCAAAACTTTGCCATGGAATATAGGGCAAAATTTGTAGTTTGGCGTCTTGCTTTTCAAGTTTTTACAGACAAGTCTCTGGCAATTAACTGTGATACTGGTGTGGACGATCAGCTTAATC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL AK069817             [                                                     TTACGGCCACGCGATCGTCGTGCTCCACCCTCAACAAACCCACGCAAGCGTCCGCGCATATCGATCCAGAATGACGTTATTGGCGATATAGATGCTAGATCGGGGAACGGCGGGGCAATCTTGCTGCTGTTTGAGACGCCATCGGGCTTTGCAATTTTCTCTTTTGATGGGATCCGCCTCATCGCACCAACTGCCATGGAGGATATCTGGCAAAACTTTGCCATGGAATATAGGGCAAAATTTGTAGTTTGGCGTCTTGCTTTTCAAGTTTTTACAGACAAGTCTCTGGCAATTAACTGTGATACTGGTGTGGACGATCAGCTTAATCTCATGATAACAAAGTACCACCGCAAAGGGGGGAAAATAGCTGTTGGGAAACCCGAATATAAAACAATCATAGAAGCAAACCTGGGTATTTCCTGTCTGTATGATGAATTTGTGATGGAGGTGATGTGGGGTTTGACGAATCTTATGCATAGTTTAGTCCCTGAAGAAAACTCTCAGCTGAGTAAGGAGGACCGTCTCCAGATGAGTCAAGGATTAAAAATGCTCCTGAATCGTTATGGATTTGATGTCAAACCAGGGATGGTTAACAAACGTATTCTTGAGGCAGCATCTGACTTGTATGATTGTGATGATTGTGAGAAGAAAAATAATTGGTCCTTGCGTCGTGCTGGTCGGAACCTTATGGATATCTCTAGCATTAACAGTGAGGATTGGGGCCTGTTGAAACTTTCTACAGCTCTGATGATAGTATGTTACCCTGAAGAAAAGATCATAGCATGCTTGCTGAAACATTCTACAGATTTGCTGATAGCATCTTACCCTAGAAGGGAAGTTATAGAATACAGTCAAAAGATGTTTTCACCAGATGTGCTATCTAAGCTGGTAACTGATGCACCAAAATATGGCATTTGGATAAAAAAGCGCACTTCCAAGAGAATCCATGAAGAAATGGTATTTTTGTATCAACAAAGGATTGAAAAGCGAAAGCTCTTGGCCACCTTGATAGGGGAGGCTACAAAGGTTTATGAAGCTGAACAAGCGGAATTGCTGACAAACTAGAAGTGACCACAGGTATTCTGAAGCTGCTATCTATGCCCAAGATGACTTCCAGTGATTTCCAGACCACCACTTCTTTTGTGTTTTGTTTATCTCAAGTTAAATTTGGGAATTACTGATATGATCAGTGTACTGTTTGGTTTCTACTTTAGACAAGTTAGACTGTGCTTCTCCAAGCTGCTATTTGTTTTGGTTTTGGTAGTATTGGTTTCTACTTTAGACAAGTCAGACTGTGTTTCTCCAAGCTGCTATTTGTTTTGGTTTTGGTAGTACTAGCTGAAGCGCACAATGCCGCGCTGCCCGGATCAATTGAAGTCCAGTATATATATACTATT]


>consensus_985#0 CGCCCGCCGGTACAGATGATCCACCCCCGTTCGCAGCCTCCGGTCATTACTCATTACGGC CACGCGATCGTCGTGCTCCACCCTCAACAAACCCACGCAAGCGTCCGCGCATATCGATCC AGAATGACGTTATTGGCGATATAGATGCTAGATCGGGGAACGGCGGGGCAATCTTGCTGC TGTTTGAGACGCCATCGGGCTTTGCAATTTTCTCTTTTGATGGGATCCGCCTCATCGCAC CAACTGCCATGGAGGATATCTGGCAAAACTTTGCCATGGAATATAGGGCAAAATTTGTAG TTTGGCGTCTTGCTTTTCAAGTTTTTACAGACAAGTCTCTGGCAATTAACTGTGATACTG GTGTGGACGATCAGCTTAATCTCATGATAACAAAGTACCACCGCAAAGGGGGGAAAATAG CTGTTGGGAAACCCGAATATAAAACAATCATAGAAGCAAACCTGGGTATTTCCTGTCTGT ATGATGAATTTGTGATGGAGGTGATGTGGGGTTTGACGAATCTTATGCATAGTTTAGTCC CTGAAGAAAACTCTCAGCTGAGTAAGGAGGACCGTCTCCAGATGAGTCAAGGATTAAAAA TGCTCCTGAATCGTTATGGATTTGATGTCAAACCAGGGATGGTTAACAAACGTATTCTTG AGGCAGCATCTGACTTGTATGATTGTGATGATTGTGAGAAGAAAAATAATTGGTCCTTGC GTCGTGCTGGTCGGAACCTTATGGATATCTCTAGCATTAACAGTGAGGATTGGGGCCTGT TGAAACTTTCTACAGCTCTGATGATAGTATGTTACCCTGAAGAAAAGATCATAGCATGCT TGCTGAAACATTCTACAGATTTGCTGATAGCATCTTACCCTAGAAGGGAAGTTATAGAAT ACAGTCAAAAGATGTTTTCACCAGATGTGCTATCTAAGCTGGTAACTGATGCACCAAAAT ATGGCATTTGGATAAAAAAGCGCACTTCCAAGAGAATCCATGAAGAAATGGTATTTTTGT ATCAACAAAGGATTGAAAAGCGAAAGCTCTTGGCCACCTTGATAGGGGAGGCTACAAAGG TTTATGAAGCTGAACAAGCGGAATTGCTGACAAACTAGAAGTGACCACAGGTATTCTGAA GCTGCTATCTATGCCCAAGATGACTTCCAGTGATTTCCAGACCACCACTTCTTTTGTGTT TTGTTTATCTCAAGTTAAATTTGGGAATTACTGATATGATCAGTGTACTGTTTGGTTTCT ACTTTAGACAAGTTAGACTGTGCTTCTCCAAGCTGCTATTTGTTTTGGTTTTGGTAGTAT TGGTTTCTACTTTAGACAAGTCAGACTGTGTTTCTCCAAGCTGCTATTTGTTTTGGTTTT GGTAGTACTAGCTGAAGCGCACAATGCCGCGCTGCCCGGATCAATTGAAGTCCAGTATAT ATATACTATT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)