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Oryza sativa
cluster # 9851 cluster # 9851       Sequences # 7       consensus # 6


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9851#0 length = 912 sequences # 2  
consensus_9851#1 length = 716 sequences # 1  
consensus_9851#2 length = 692 sequences # 1  
consensus_9851#3 length = 440 sequences # 1  
consensus_9851#4 length = 401 sequences # 1  
consensus_9851#5 length = 332 sequences # 1  

consensusID : consensus_9851#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 912
fasta sequence
                              [ACCCACCGCCACCGCCGGCGTCGATCTGTCGTCGATTCCCATCTCCAGATCGACGCCACTAGCGCCCCCTCACGCCGCAAGAACGCTGTCGCCTCGGCTCATCGATCTCCGACAACGCCGCCGCGCGCCGCCGTCGATCTCCGCCGCAAGAACAACGTCGCCCCGCCTCACCGAGCTCCTCCGACGATATTCCGCGTCAATTAATCTTCAGAGCAATAAGGGACATCAATTTCCACCTTGCTGATATCGCGGCACCGTTGATACCGGTCACCGGAGAGCGTCTATTTCACCTGCACTGCTCCTGTTGTCATCCACGACCACACTGCATCAATGTCCTCGACCTCTACCTGTCGCTGACGACCATCCAGGAAGGTCGCCCTCGCAGCGTTCTAAGCTGGGTTCCGTCCGTGCCCACCATTGAGAATATCAGATTTTAGGCCTTTTAAGGTTTGTTTTCTGGTCACATTCTATGTCTCATATTTTCCATCACAATTTTGTCCCGAACTTTTTGGATCCCGCCTTTCTGTTTCTGTAGGTATTTGACAGCATTTTGATGCTTCGCTACTTCATGGACCTTTGCATGACCTTATTCAACATGTAATAAGTACTACCACAACGCATTTTATTTTGATGATGACTGAGCTAGGCTACTTTTGAGTTACTCACATTTGGATCTACAATTCTGCTGATCTAAATAATAATTGCTAATGTAACAGCAGTTCCAGGAGAATCTGACTTAGCAGATGTAAATATGTTTCTAACATTATATGAGATTTTCTTTTTATGCGTAGCTATGCAAGCCACAACTGAGTTCCTATACACCATTTCTCACCCAAAAGTTGTAAGAACTAGGAGGCACTTCAAGTTTTGAAGTTAATTTGAGCAGAATTTGTCTCCTGGATATAAAAAAAA]

[+] EMBL AK062920             [ACCCACCGCCACCGCCGGCGTCGATCTGTCGTCGATTCCCATCTCCAGATCGACGCCACTAGCGCCCCCTCACGCCGCAAGAACGCTGTCGCCTCGGCTCATCGATCTCCGACAACGCCGCCGCGCGCCGCCGTCGATCTCCGCCGCAAGAACAACGTCGCCCCGCCTCACCGAGCTCCTCCGACGATATTCCGCGTCAATTAATCTTCAGAGCAATAAGGGACATCAATTTCCACCTTGCTGATATCGCGGCACCGTTGATACCGGTCACCGGAGAGCGTCTATTTCACCTGCACTGCTCCTGTTGTCATCCACGACCACACTGCATCAATGTCCTCGACCTCTACCTGTCGCTGACGACCATCCAGGAAGGTCGCCCTCGCAGCGTTCTAAGCTGGGTTCCGTCCGTGCCCACCATTGAGAATATCAGATTTTAGGCCTTTTAAGGTTTGTTTTCTGGTCACATTCTATGTCTCATATTTTCCATCACAATTTTGTCCCGAACTTTTTGGATCCCGCCTTTCTGTTTCTGTAGGTATTTGACAGCATTTTGATGCTTCGCTACTTCATGGACCTTTGCATGACCTTATTCAACATGTAATAAGTACTACCACAACGCATTTTATTTTGATGATGACTGAGCTAGGCTACTTTTGAGTTACTCACATTTGGATCTACAATTCTGCTGATCTAAATAATAATTGCTAATGTAACAGCAGTTCCAGGAGAATCTGACTTAGCAGATGTAAATATGTTTCTAACATTATATGAGATTTTCTTTTTATGCGTAGCTATGCAAGCCACAACTGAGTTCCTATACACCATTTCTCACCCAAAAGTTGTAAGAACTAGGAGGCACTTCAAGTTTTGAAGT                                      ]
[+] EMBL CB000012             [                                                                                                                                                                                                                                                                                    AGCGTCTATTTCACCTGCACTGCTCCTGTTGTCCTTCACGACCACACTGCATCAATGTCCTCGACCTCTACCTGTCGCTGACGACCATCCAGGAAGGTCGCCCTCGCAGCGTTCTAAGCTGGGTTCCGTCCGTGCCCACCATTGAGAATATCAGATTTTAGGCCTTTTAAGGTTTGTTTTCTGGTCACATTCTATGTCTCATATTTTCCATCACAATTTTGTCCCGAACTTTTTGGATCCCGCCTTTCTGTTTCTGTAGGTATTTGACAGCATTTTGATGCTTCGCTACTTCATGGACCTTTGCATGACCTTATTCAACATGTAATAAGTACTACCACAACGCATTTTATTTTGATGATGACTGAGCTAGGCTACTTTTGAGTTACTCACATTTGGATCTACAATTCTGCTGATCTAAATAATAATTGCTAATGTAACAGCAGTTCCAGGAGAATCTGACTTAGCAGATGTAAATATGTTTCTAACATTATATGAGATTTTCTTTTTATGCGTAGCTATGCAAGCCACAACTGAGTTCCTATACACCATTTCTCACCCAAAAGTTGTAAGAACTAGGAGGCACTTCAAGTTTTGAAGTTAATTTGAGCAGAATTTGTCTCCTGGATATAAAAAAAA]


>consensus_9851#0 ACCCACCGCCACCGCCGGCGTCGATCTGTCGTCGATTCCCATCTCCAGATCGACGCCACT AGCGCCCCCTCACGCCGCAAGAACGCTGTCGCCTCGGCTCATCGATCTCCGACAACGCCG CCGCGCGCCGCCGTCGATCTCCGCCGCAAGAACAACGTCGCCCCGCCTCACCGAGCTCCT CCGACGATATTCCGCGTCAATTAATCTTCAGAGCAATAAGGGACATCAATTTCCACCTTG CTGATATCGCGGCACCGTTGATACCGGTCACCGGAGAGCGTCTATTTCACCTGCACTGCT CCTGTTGTCATCCACGACCACACTGCATCAATGTCCTCGACCTCTACCTGTCGCTGACGA CCATCCAGGAAGGTCGCCCTCGCAGCGTTCTAAGCTGGGTTCCGTCCGTGCCCACCATTG AGAATATCAGATTTTAGGCCTTTTAAGGTTTGTTTTCTGGTCACATTCTATGTCTCATAT TTTCCATCACAATTTTGTCCCGAACTTTTTGGATCCCGCCTTTCTGTTTCTGTAGGTATT TGACAGCATTTTGATGCTTCGCTACTTCATGGACCTTTGCATGACCTTATTCAACATGTA ATAAGTACTACCACAACGCATTTTATTTTGATGATGACTGAGCTAGGCTACTTTTGAGTT ACTCACATTTGGATCTACAATTCTGCTGATCTAAATAATAATTGCTAATGTAACAGCAGT TCCAGGAGAATCTGACTTAGCAGATGTAAATATGTTTCTAACATTATATGAGATTTTCTT TTTATGCGTAGCTATGCAAGCCACAACTGAGTTCCTATACACCATTTCTCACCCAAAAGT TGTAAGAACTAGGAGGCACTTCAAGTTTTGAAGTTAATTTGAGCAGAATTTGTCTCCTGG ATATAAAAAAAA



consensusID : consensus_9851#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 716
fasta sequence
                              [CCTCTCTCTCGCACACCCGCCGCCGCCGCTCTCCCCTCCTCTCTCTCGCACACCCGCCGCCGGCGCCGCCGGCGGCGTCGATCCGACGTCGATTCCCATCTTCAGATCGACGCCACCGGCGCCCCCTCACGCCGCTTCTACTCACGCCGCAAGAACGCTATCGCCTCGCCTCATCGATCTCCGACAACACCGCCGCGCGCCGCCGCCGATCTCCGCCGCAAGAACAACGTCGCTCCGCCTCACCGATCTCCTCCGACGATATTCCGCGTCAATTAATCTTCAGATCAATAAGGCAGTGGAGGCCGAGGAGGCCGCCATCCACAACCGACAACGACAACGCGATGCTGCTGCCGCCTCAAGATCCACCGCTGCCTATCCGTACTCACGCCACCGTTCCTCCTCCGCCGAAAGGTTCAGGGCACCCTTCGCCACCCCTACCCCATCCCTAATATGTCTCCTCTCTCCCGATAAGTATCCCTGATGTCGATCTTATGTAAAAGCATGATTTATGCTCAATATATATTCAATGTAATTTGTGCTGGAAATTGGGAATCATGGATGACATTTTCTGTATATCTACATCCAAAGCCAACTGTGAACAGTTGTATTTTCCTCTGATAAGCACTTTCAAACTCTTGAATATGTACCATACTGCTGATTTCAGTATGGTGGGGAATTGATGTGGCTGGAATAAGAAAAAACATTCTCACACCCTG]

[+] EMBL AK072563             [CCTCTCTCTCGCACACCCGCCGCCGCCGCTCTCCCCTCCTCTCTCTCGCACACCCGCCGCCGGCGCCGCCGGCGGCGTCGATCCGACGTCGATTCCCATCTTCAGATCGACGCCACCGGCGCCCCCTCACGCCGCTTCTACTCACGCCGCAAGAACGCTATCGCCTCGCCTCATCGATCTCCGACAACACCGCCGCGCGCCGCCGCCGATCTCCGCCGCAAGAACAACGTCGCTCCGCCTCACCGATCTCCTCCGACGATATTCCGCGTCAATTAATCTTCAGATCAATAAGGCAGTGGAGGCCGAGGAGGCCGCCATCCACAACCGACAACGACAACGCGATGCTGCTGCCGCCTCAAGATCCACCGCTGCCTATCCGTACTCACGCCACCGTTCCTCCTCCGCCGAAAGGTTCAGGGCACCCTTCGCCACCCCTACCCCATCCCTAATATGTCTCCTCTCTCCCGATAAGTATCCCTGATGTCGATCTTATGTAAAAGCATGATTTATGCTCAATATATATTCAATGTAATTTGTGCTGGAAATTGGGAATCATGGATGACATTTTCTGTATATCTACATCCAAAGCCAACTGTGAACAGTTGTATTTTCCTCTGATAAGCACTTTCAAACTCTTGAATATGTACCATACTGCTGATTTCAGTATGGTGGGGAATTGATGTGGCTGGAATAAGAAAAAACATTCTCACACCCTG]


>consensus_9851#1 CCTCTCTCTCGCACACCCGCCGCCGCCGCTCTCCCCTCCTCTCTCTCGCACACCCGCCGC CGGCGCCGCCGGCGGCGTCGATCCGACGTCGATTCCCATCTTCAGATCGACGCCACCGGC GCCCCCTCACGCCGCTTCTACTCACGCCGCAAGAACGCTATCGCCTCGCCTCATCGATCT CCGACAACACCGCCGCGCGCCGCCGCCGATCTCCGCCGCAAGAACAACGTCGCTCCGCCT CACCGATCTCCTCCGACGATATTCCGCGTCAATTAATCTTCAGATCAATAAGGCAGTGGA GGCCGAGGAGGCCGCCATCCACAACCGACAACGACAACGCGATGCTGCTGCCGCCTCAAG ATCCACCGCTGCCTATCCGTACTCACGCCACCGTTCCTCCTCCGCCGAAAGGTTCAGGGC ACCCTTCGCCACCCCTACCCCATCCCTAATATGTCTCCTCTCTCCCGATAAGTATCCCTG ATGTCGATCTTATGTAAAAGCATGATTTATGCTCAATATATATTCAATGTAATTTGTGCT GGAAATTGGGAATCATGGATGACATTTTCTGTATATCTACATCCAAAGCCAACTGTGAAC AGTTGTATTTTCCTCTGATAAGCACTTTCAAACTCTTGAATATGTACCATACTGCTGATT TCAGTATGGTGGGGAATTGATGTGGCTGGAATAAGAAAAAACATTCTCACACCCTG



consensusID : consensus_9851#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 692
fasta sequence
                              [GAAACCCAACTTCAGACAACTTTGCAACTGATAGGACATTAATAGAAAATTGAGACATTGTGTTGTGGTCAAGATCAAGAGACTTTCTAAACTACCGTGCATTTTTTTTACTAGATAATGCAAGATTTTCATTTCTTGTAATTTTGACAGCCATTTTGTCCAACTTTTCAGAATATCAGATTTTAGGCCTTTTAAGGTTTGTTTTCTGGTCACATTCTATGTCTCATATTTTCCATCACAATTTTGTCCCGAACTTTTTGGATCCCGCCTTTCTGTTTCTGTAGGTATTTGACAGCATTTTGAATNTTCGCTACTTCATGGACCTTTGCATGACCTTATTCAACATGTAATAAGTACTACCACAACGCATTTTATTTTGATGATGACTGAGCTAGGCTACTTTTGAGTTACTCACATTTGGATCTACAATTCTGCTGATCTAAATAATAATTGCTAATGTAACAGCAGTTCCAGGAGAATCTGACTTAGCAGATGTAAATATGTTTCTAACATTATATGAGATTTTCTTTTTATGCGTAGCTATGCAAGCCACAACTGAGTTCCTATACACCATTTCTCACCCAAAAGTTGTAAGAACTAGGAGGCACTTCAAGTTTTGAAGTTAATTTGAGCAGAATTTGTCTCCTGGATATATATTTTTTGGAGTAATAATCTAATCCTTTTTGAAAAAA]

[+] EMBL AU085853             [GAAACCCAACTTCAGACAACTTTGCAACTGATAGGACATTAATAGAAAATTGAGACATTGTGTTGTGGTCAAGATCAAGAGACTTTCTAAACTACCGTGCATTTTTTTTACTAGATAATGCAAGATTTTCATTTCTTGTAATTTTGACAGCCATTTTGTCCAACTTTTCAGAATATCAGATTTTAGGCCTTTTAAGGTTTGTTTTCTGGTCACATTCTATGTCTCATATTTTCCATCACAATTTTGTCCCGAACTTTTTGGATCCCGCCTTTCTGTTTCTGTAGGTATTTGACAGCATTTTGAATNTTCGCTACTTCATGGACCTTTGCATGACCTTATTCAACATGTAATAAGTACTACCACAACGCATTTTATTTTGATGATGACTGAGCTAGGCTACTTTTGAGTTACTCACATTTGGATCTACAATTCTGCTGATCTAAATAATAATTGCTAATGTAACAGCAGTTCCAGGAGAATCTGACTTAGCAGATGTAAATATGTTTCTAACATTATATGAGATTTTCTTTTTATGCGTAGCTATGCAAGCCACAACTGAGTTCCTATACACCATTTCTCACCCAAAAGTTGTAAGAACTAGGAGGCACTTCAAGTTTTGAAGTTAATTTGAGCAGAATTTGTCTCCTGGATATATATTTTTTGGAGTAATAATCTAATCCTTTTTGAAAAAA]


>consensus_9851#2 GAAACCCAACTTCAGACAACTTTGCAACTGATAGGACATTAATAGAAAATTGAGACATTG TGTTGTGGTCAAGATCAAGAGACTTTCTAAACTACCGTGCATTTTTTTTACTAGATAATG CAAGATTTTCATTTCTTGTAATTTTGACAGCCATTTTGTCCAACTTTTCAGAATATCAGA TTTTAGGCCTTTTAAGGTTTGTTTTCTGGTCACATTCTATGTCTCATATTTTCCATCACA ATTTTGTCCCGAACTTTTTGGATCCCGCCTTTCTGTTTCTGTAGGTATTTGACAGCATTT TGAATNTTCGCTACTTCATGGACCTTTGCATGACCTTATTCAACATGTAATAAGTACTAC CACAACGCATTTTATTTTGATGATGACTGAGCTAGGCTACTTTTGAGTTACTCACATTTG GATCTACAATTCTGCTGATCTAAATAATAATTGCTAATGTAACAGCAGTTCCAGGAGAAT CTGACTTAGCAGATGTAAATATGTTTCTAACATTATATGAGATTTTCTTTTTATGCGTAG CTATGCAAGCCACAACTGAGTTCCTATACACCATTTCTCACCCAAAAGTTGTAAGAACTA GGAGGCACTTCAAGTTTTGAAGTTAATTTGAGCAGAATTTGTCTCCTGGATATATATTTT TTGGAGTAATAATCTAATCCTTTTTGAAAAAA



consensusID : consensus_9851#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 440
fasta sequence
                              [ACACCCACCGCCACCGCCGGCGTCGATCTGTCGTCGATTCCCATCTCCAGATCGACGCCACTAGCGCCCCCTCACGCCGCAAGAACGCTGTCGCCTCGGCTCATCGATCTCCGACAACGCCGCCGCGCGCCGCCGTCGATCTCCGCCGCAAGAACAACGTCGCCCCGCCTCACCGAGCTCCTCCGACGATATTCCGCGTCAATTAATCTTCAGAGCAATAAGGGACATCAATTTCCACCTTGCTGATATCGCGGCACCGTTGATACCGGTCACCGGAGAGCGTCTATTTCANCTGCACTGCTCCTGTTGTCATCCACGACCACACTGCATCAATGTCCTCGACCTCTACCTGTCGTTGACGACCATNCAGGAAGGTCGNCCTTGGAAGCGTTCTAAGCTGGGTTCCGTCCGTGGCCAACATTGAGGGTAAATTATTNTAT]

[+] EMBL C72192               [ACACCCACCGCCACCGCCGGCGTCGATCTGTCGTCGATTCCCATCTCCAGATCGACGCCACTAGCGCCCCCTCACGCCGCAAGAACGCTGTCGCCTCGGCTCATCGATCTCCGACAACGCCGCCGCGCGCCGCCGTCGATCTCCGCCGCAAGAACAACGTCGCCCCGCCTCACCGAGCTCCTCCGACGATATTCCGCGTCAATTAATCTTCAGAGCAATAAGGGACATCAATTTCCACCTTGCTGATATCGCGGCACCGTTGATACCGGTCACCGGAGAGCGTCTATTTCANCTGCACTGCTCCTGTTGTCATCCACGACCACACTGCATCAATGTCCTCGACCTCTACCTGTCGTTGACGACCATNCAGGAAGGTCGNCCTTGGAAGCGTTCTAAGCTGGGTTCCGTCCGTGGCCAACATTGAGGGTAAATTATTNTAT]


>consensus_9851#3 ACACCCACCGCCACCGCCGGCGTCGATCTGTCGTCGATTCCCATCTCCAGATCGACGCCA CTAGCGCCCCCTCACGCCGCAAGAACGCTGTCGCCTCGGCTCATCGATCTCCGACAACGC CGCCGCGCGCCGCCGTCGATCTCCGCCGCAAGAACAACGTCGCCCCGCCTCACCGAGCTC CTCCGACGATATTCCGCGTCAATTAATCTTCAGAGCAATAAGGGACATCAATTTCCACCT TGCTGATATCGCGGCACCGTTGATACCGGTCACCGGAGAGCGTCTATTTCANCTGCACTG CTCCTGTTGTCATCCACGACCACACTGCATCAATGTCCTCGACCTCTACCTGTCGTTGAC GACCATNCAGGAAGGTCGNCCTTGGAAGCGTTCTAAGCTGGGTTCCGTCCGTGGCCAACA TTGAGGGTAAATTATTNTAT



consensusID : consensus_9851#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 401
fasta sequence
                              [TGCCGCCTCAAGATCCACCGCTGCCTATCCGTACTCACGCCACCGTTCCTCCTCCGCCGAAAGGTTCAGGGCACCCTTCGCCACCCCTACCCCATCCCTAATATGTCTCCTCTATCCCGATAAGTATCCCTGATGTCGATCTTATGTAAAAGCATGATTTATGCTCAATATATATTCAATGTAATTTGTGCTGGAAATTGGGAATCATGGATGACATTTTCTGTATATCTACATCCAAAGCCAACTGTGAACAGTTGTATTTTCCTCTGATAAGCACTTTCAAACTCTTGAATATGTACCATACTGCTGATTTCAGTATGGTGGGGAATTGATGTGGCTGGAATAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL BE040545             [TGCCGCCTCAAGATCCACCGCTGCCTATCCGTACTCACGCCACCGTTCCTCCTCCGCCGAAAGGTTCAGGGCACCCTTCGCCACCCCTACCCCATCCCTAATATGTCTCCTCTATCCCGATAAGTATCCCTGATGTCGATCTTATGTAAAAGCATGATTTATGCTCAATATATATTCAATGTAATTTGTGCTGGAAATTGGGAATCATGGATGACATTTTCTGTATATCTACATCCAAAGCCAACTGTGAACAGTTGTATTTTCCTCTGATAAGCACTTTCAAACTCTTGAATATGTACCATACTGCTGATTTCAGTATGGTGGGGAATTGATGTGGCTGGAATAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_9851#4 TGCCGCCTCAAGATCCACCGCTGCCTATCCGTACTCACGCCACCGTTCCTCCTCCGCCGA AAGGTTCAGGGCACCCTTCGCCACCCCTACCCCATCCCTAATATGTCTCCTCTATCCCGA TAAGTATCCCTGATGTCGATCTTATGTAAAAGCATGATTTATGCTCAATATATATTCAAT GTAATTTGTGCTGGAAATTGGGAATCATGGATGACATTTTCTGTATATCTACATCCAAAG CCAACTGTGAACAGTTGTATTTTCCTCTGATAAGCACTTTCAAACTCTTGAATATGTACC ATACTGCTGATTTCAGTATGGTGGGGAATTGATGTGGCTGGAATAAGAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA



consensusID : consensus_9851#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 332
fasta sequence
                              [ACCGCCACCACCACCCTCTATNNCCCGCACGCACCCCTNTNCCCTCCTCTCTCTCGCACACCCACCGCCACCGCCGGCGTCGATCTGTCGTCGATTCCCATCTCCAGATCGACGCCACTAGCGCCCCCTNACGCCGCAAGAACGCTGTCGCCTCGGCTCATCGATCTNCGACAACGNCGCCGCGCGCCGCCGTCGATCTTCGCCGCAAGAACAACGTNGNCCCGNCTTANCGAGCTNCTNCGACGATATTCGGNGTCAATTAATGTTAAGAGCAATAAGGGACATNAATTTCCAACTTTGGTTGATATTGGGGGGAACGGTTGATAACGGGT]

[+] EMBL OS1045A              [ACCGCCACCACCACCCTCTATNNCCCGCACGCACCCCTNTNCCCTCCTCTCTCTCGCACACCCACCGCCACCGCCGGCGTCGATCTGTCGTCGATTCCCATCTCCAGATCGACGCCACTAGCGCCCCCTNACGCCGCAAGAACGCTGTCGCCTCGGCTCATCGATCTNCGACAACGNCGCCGCGCGCCGCCGTCGATCTTCGCCGCAAGAACAACGTNGNCCCGNCTTANCGAGCTNCTNCGACGATATTCGGNGTCAATTAATGTTAAGAGCAATAAGGGACATNAATTTCCAACTTTGGTTGATATTGGGGGGAACGGTTGATAACGGGT]


>consensus_9851#5 ACCGCCACCACCACCCTCTATNNCCCGCACGCACCCCTNTNCCCTCCTCTCTCTCGCACA CCCACCGCCACCGCCGGCGTCGATCTGTCGTCGATTCCCATCTCCAGATCGACGCCACTA GCGCCCCCTNACGCCGCAAGAACGCTGTCGCCTCGGCTCATCGATCTNCGACAACGNCGC CGCGCGCCGCCGTCGATCTTCGCCGCAAGAACAACGTNGNCCCGNCTTANCGAGCTNCTN CGACGATATTCGGNGTCAATTAATGTTAAGAGCAATAAGGGACATNAATTTCCAACTTTG GTTGATATTGGGGGGAACGGTTGATAACGGGT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9851#1      ------------------------------------------------------------
consensus_9851#4      ------------------------------------------------------------
consensus_9851#5      ------------------------------------------------------------
consensus_9851#3      ------------------------------------------------------------
consensus_9851#0      ACCCACCGCCACCGCCGGCGTCGATCTGTCGTCGATTCCCATCTCCAGATCGACGCCACT 60
consensus_9851#2      ------------------------------------------------------------
                                                                                  

consensus_9851#1      ------------------------------------------------------------
consensus_9851#4      ------------------------------------------------------------
consensus_9851#5      ------------------------------------------------------------
consensus_9851#3      ------------------------------------------------------------
consensus_9851#0      AGCGCCCCCTCACGCCGCAAGAACGCTGTCGCCTCGGCTCATCGATCTCCGACAACGCCG 120
consensus_9851#2      ------------------------------------------------------------
                                                                                  

consensus_9851#1      ------CCTCTCTCTCGCACACCCGCCGCCGCCGCTCTCCCCTCCTCTCTCTCGCACACC 54
consensus_9851#4      ------------------------------------------------------------
consensus_9851#5      ------------------------------------------------------------
consensus_9851#3      ------------------------------------------------------------
consensus_9851#0      CCGCGCGCCGCCGTCGATCTCCGCCGCAAGAACAACGTCGCCCCGCCTCACCGAGCTCCT 180
consensus_9851#2      ------------------------------------------------------------
                                                                                  

consensus_9851#1      CGCCGCCGGCGCCGCCGGCGGCGTCGATCCGACGTCGATTCCCATCTTCAGATCGACGCC 114
consensus_9851#4      ------------------------------------------------------------
consensus_9851#5      ------------------------------------------------------------
consensus_9851#3      ------------------------------------------------------------
consensus_9851#0      CCGACGATATTCCGCGTCAATTAATCTTCAGAGCAATAAGGGACATCAATTTCCACCTTG 240
consensus_9851#2      --------------------------------------------------------GAAA 4
                                                                                  

consensus_9851#1      ACCGGCGCCCCCTCACGCCGCTTCTACTCACGCCGCAAGAACGCTATCGCCTCGCCTCAT 174
consensus_9851#4      ------------------------------------------------------------
consensus_9851#5      ------------------------------------------------------------
consensus_9851#3      ------------------------------------------------------------
consensus_9851#0      CTGATATCGCGGCACCGTTGATACCGGTCACCGGAGAGCGTCTATTTCACCTGCACTGCT 300
consensus_9851#2      CCCAACTTCAGACAACTTTGCAACTGAT------AGGACATTAATAGAAAATTGAGACAT 58
                                                                                  

consensus_9851#1      CGATCTCCGACAACACCGCCGCGCGCCGCCGCCGATCTCCGCCGCAAGAACAACGTC-GC 233
consensus_9851#4      ------------------------------------------------------------
consensus_9851#5      ------------------------------------------------------------
consensus_9851#3      ------------------------------------------------------------
consensus_9851#0      CCTGTTGTCATCCACGACCACACTGCATCAATGTCCTCGACCTCTACCTGTCGCTGACGA 360
consensus_9851#2      TGTGTTGTGGTC-AAGATCAAGAGACTTTCTAAACTACCGTGCATTTTTTTTACTA--GA 115
                                                                                  

consensus_9851#1      TCCGCCTCACCGATCTCCTCCGACGATATTCCGCGTCAATTAATCTTCAGATCAATAAGG 293
consensus_9851#4      ------------------------------------------------------------
consensus_9851#5      ------------------------------------------------------------
consensus_9851#3      ------------------------------------------------------------
consensus_9851#0      CCATCCAGGAAGGTCGCC-CTCGCAGCGTTCTAAGCTGGGTTCCGTCCGTGCCCACCATT 419
consensus_9851#2      TAATGCAAGATTTTCATTTCTTGTAATTTTGACAGCCA--TTTTGTCCA-----ACTTTT 168
                                                                                  

consensus_9851#1      CAGTGGAGGCCGAGGAGGCCGCCATCCACAACCGACAACGACAACGCGATGCTG-CTGCC 352
consensus_9851#4      --------------------------------------------------------TGCC 4
consensus_9851#5      ------------------------------------------------------------
consensus_9851#3      ------------------ACACCCACCGCCACCGCCGGCGTCGATCTGTCGTCGATTCCC 42
consensus_9851#0      GAGAATATCAGATTTTAGGCCTTTTAAGGTTTGTTTTCTGGTCACATTCTATGTCTCATA 479
consensus_9851#2      CAGAATATCAGATTTTAGGCCTTTTAAGGTTTGTTTTCTGGTCACATTCTATGTCTCATA 228
                                                                                  

consensus_9851#1      GCCTCAAGATCCACCGCTGCCTATCCGTACTCACGCCACCGTTCCTCCTCCGCCGAAAGG 412
consensus_9851#4      GCCTCAAGATCCACCGCTGCCTATCCGTACTCACGCCACCGTTCCTCCTCCGCCGAAAGG 64
consensus_9851#5      ACCGCCA---CCACCACCCTCTATNN-CCCGCACGCACCCCTNTNCCCTCCTCTC----- 51
consensus_9851#3      ATCTCCAGATCGAC-GCCACTAGCGCCCCCTCACGCCGCAAGAACGCTGTCGCCTC--GG 99
consensus_9851#0      TTTTCCATCACAATTTTGTCCCGAACTTTTTGGATCCCGCCTTTCTGTTTCTGTAGGTAT 539
consensus_9851#2      TTTTCCATCACAATTTTGTCCCGAACTTTTTGGATCCCGCCTTTCTGTTTCTGTAGGTAT 288
                          * *   * *                      *              *         

consensus_9851#1      TTCAGGGCACCCTTCGCCACCCCTACCCCAT---CCCTAATAT-GTCTCCTCTCTCCCG- 467
consensus_9851#4      TTCAGGGCACCCTTCGCCACCCCTACCCCAT---CCCTAATAT-GTCTCCTCTATCCCG- 119
consensus_9851#5      TCTCGCACACCCACCGCCACCGCCGGCGTCG---ATCTGTCGTCGATTCCCATCTCCAG- 107
consensus_9851#3      CTCAT--CGATCTCCGACAACGCCGCCGCGC---GCC-GCCGTCGATCTCCGCCGCAAG- 152
consensus_9851#0      TTGACAGCATTTTGATGCTTCGCTACTTCATGGACCTTTGCATGACCTTATTCAACATGT 599
consensus_9851#2      TTGACAGCATTTTGAATNTTCGCTACTTCATGGACCTTTGCATGACCTTATTCAACATGT 348
                             *            * *                   *            *  * 

consensus_9851#1      -ATAAGTATCCCTGATGTCGATCTTATGTAA---AAGCATGATTTATGCTCAATATAT-A 522
consensus_9851#4      -ATAAGTATCCCTGATGTCGATCTTATGTAA---AAGCATGATTTATGCTCAATATAT-A 174
consensus_9851#5      -ATCGACGCCACTAGCGCCC-CCTNACGCCGC--AAGAACGCTGTCGCCTCGGCTCATCG 163
consensus_9851#3      -AACAACGTCGCCCCGCCTCACCGAGCTCCTC--CGACGATATTCCGCGTCAATTAAT-C 208
consensus_9851#0      AATAAGTACTACCACAACGCATTTTATTTTGATGATGACTGAGCTAGGCT--ACTTTTGA 657
consensus_9851#2      AATAAGTACTACCACAACGCATTTTATTTTGATGATGACTGAGCTAGGCT--ACTTTTGA 406
                       *         *                                     *       *  

consensus_9851#1      TTCAATGTAATTTGTGCTGGAAATTGGGAA-TCATGGATGA---CATTTTCTGTATATCT 578
consensus_9851#4      TTCAATGTAATTTGTGCTGGAAATTGGGAA-TCATGGATGA---CATTTTCTGTATATCT 230
consensus_9851#5      ATCTNCGACAACGNCGCCGCGCGCCG-----CCGTCGATCTT--CGCCGCAAGAACAACG 216
consensus_9851#3      TTCAGAGCAATAAGGGACATCAATTTCCACCTTGCTGATATCGCGGCACCGTTGATACCG 268
consensus_9851#0      GTTACTCACATTTGGATCTACAATTCTGCTGATCTAAATAAT--AATTGCTAATGTAACA 715
consensus_9851#2      GTTACTCACATTTGGATCTACAATTCTGCTGATCTAAATAAT--AATTGCTAATGTAACA 464
                       *       *                           **                 * * 

consensus_9851#1      ACA--TCCAAAGCCAACTG--TGAACAGTTGTATT--TTCCTCTGATAAGCACTTTCAAA 632
consensus_9851#4      ACA--TCCAAAGCCAACTG--TGAACAGTTGTATT--TTCCTCTGATAAGCACTTTCAAA 284
consensus_9851#5      TNG--NCCCGNCTTANCGA--GCTNCTNCGACGAT--ATTCGGNGTCAATTAATGTTAAG 270
consensus_9851#3      GTC--ACCGGAGAGCGTCT--ATTTCANCTGCACTGCTCCTGTTGTCATCCACGACCACA 324
consensus_9851#0      GCAGTTCCAGGAGAATCTGACTTAGCAGATGTAAATATGTTTCTAACA-TTATATGAGAT 774
consensus_9851#2      GCAGTTCCAGGAGAATCTGACTTAGCAGATGTAAATATGTTTCTAACA-TTATATGAGAT 523
                            **                 *                     *   *        

consensus_9851#1      CTCTTGAATATGTACCATACTGCTGATTTCAGTATGGTGGGGAATTGATGTGGCTGGAAT 692
consensus_9851#4      CTCTTGAATATGTACCATACTGCTGATTTCAGTATGGTGGGGAATTGATGTGGCTGGAAT 344
consensus_9851#5      AGCAATAAGGGACATNA-ATTTCCAACTTTGGT-TGATATTGGGGGGA-ACGGTTGATAA 327
consensus_9851#3      CTGCATCA-ATGTCCTCGACCTCTACCTGTCGT-TGACGACCATNCAGGAAGGTCGNCCT 382
consensus_9851#0      TTTCTTTTTATGCGTAGCTATGCAAGCCACAACTGAGTTCCTATACACCATTTCTCACCC 834
consensus_9851#2      TTTCTTTTTATGCGTAGCTATGCAAGCCACAACTGAGTTCCTATACACCATTTCTCACCC 583
                                            *                                     

consensus_9851#1      AAGAAAAAACATTCTCACACCCTG------------------------------------ 716
consensus_9851#4      AAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA--- 401
consensus_9851#5      CGGGT------------------------------------------------------- 332
consensus_9851#3      TGGAAGCGTTCTAAGCTGGGTTCCGTCCGTGGCCAACATTGAGGGTAAATTATTNTAT-- 440
consensus_9851#0      AAAAGTTGTAAGAACTAGGAGGCACTTCAAGTTTTGAAGTTAATTTGAGCAGAATTTGTC 894
consensus_9851#2      AAAAGTTGTAAGAACTAGGAGGCACTTCAAGTTTTGAAGTTAATTTGAGCAGAATTTGTC 643
                                                                                  

consensus_9851#1      -------------------------------------------------
consensus_9851#4      -------------------------------------------------
consensus_9851#5      -------------------------------------------------
consensus_9851#3      -------------------------------------------------
consensus_9851#0      TCCTGGATATAAAAAAAA------------------------------- 912
consensus_9851#2      TCCTGGATATATATTTTTTGGAGTAATAATCTAATCCTTTTTGAAAAAA 692
                                                                       




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)