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Oryza sativa
cluster # 9873 cluster # 9873       Sequences # 7       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9873#0 length = 621 sequences # 7  

consensusID : consensus_9873#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 621
fasta sequence
                              [GCTCGAAGAG-ACCTCTCC-CTCT-AAAGCAGTTGCGGTGAGAACCAAGACGCCG-ACATGTGCTGGAAAGGTCCTAGCAACGTGATGGAGCGGGTACTGGCAGCTTTCATGTTTTGTGGCTGCTCCTTCTGCAGTGGTCCGGTGCAGCTAGCGCCGGAAAATTGGGCAGCCGCACGCCAGGCGTCGAACATGTCGACAGCTCTCCTC-AGATGTCAGCTTGGTAGCGGCAAGTATTCATAGGCACGCACAGGTGATGTCGGTCAAGACAAAAGGGAAAACAAAAGGAAGAAGAGGTGCATCAAGCTGACATGGCCAGCGCCCCTGCAGCGAGACAGCTAGAGAGGTCGATCGGCACACGGTGCACATCATTACTCGCATGGGAGCACGCCGTTCACGATGCCTTGTCGATCATGTTCTGATTAGTTGGCCAATGCTTGGTGCGACAGGTTCCCAAACAGGAGCACACCCACGGGGCCGGAAAAGTCGACGACGTTGTTGCTGTAAGAAGACACCATGTAACGTTACTCTGGACTCAGGCCTCTTGAGGGCCTTTGGACGTTGGCGGAAGTTAAGCCAGCAGACTACGCGTGTGAATTTGAATACGGGACAGCGGAGGGACGGCGG]

[+] EMBL CF338510             [GCTCGAAGAG ACCTCTCC CTCT AAAGCAGTTGCGGTGAGAACC AGACGCCG ACATGTGCTGGAAAGGTCCTAGCAACGTGATGGAGCGGGTACTGGCAGCTTTCATGTTTTGTGGCTGCTCCTTCTGCAGTGGTCCGGTGCAGCTAGCGCCGGAAAATTGGGCAGCCGCACGCCAGGCGTCGAACATGTCGACAGCTCTCCTC AGATGTCAGCTTGGTAGCGGCAAGTATTCATAGGCACGCACAGGTGATGTCGGTCAAGACAAAAGGGAAAACAAAAGGAAGAAGAGGTGCATCAAGCTGACATGGCCAGCGCCCCTGCAGCGAGACAGCTAGAGAGGTCGATCGGCACACGGTGCACATCATTACTCGCATGGGAGCACGCCGTTCACGATGCCTTGTCGATCATGTTCTGATTAGTTGGCCAATGCTTGGTGCGACAGGTTCCCAAACAGGAGCACACCCACGGGGCCGGAAAAGTCGACGACGTTGTTGCTGTAAGAAGACACCATGT                                                                                                           ]
[+] EMBL CF339663             [ CTCGAAGAG TCCTCTCCACTCTCAAAGCAGTTGCGGTGAGAACCAAGACGCCG ACATGTGCTGGAAAGGTCCTAGCAACGTGATGGAGCGGGTACTGGCAGCTTTCATGTTTTGTGGCTGCTCCTTCTGCAGTGGTCCGGTGCAGCTAGCGCCGGAAAATTGGGCAGCCGCACGCCAGGCGTCGAACATGTCGACAGCTCTCCTC AGATGTCAGCTTGGTAGCGGCAAGTATTCATAGGCACGCACAGGTGATGTCGGTCAAGACAAAAGGGAAAACAAAAGGAAGAAGAGGTGCATCAAGCTGACATGGCCAGCGCCCCTGCAGCGAGACAGCTAGAGAGGTCGATCGGCACACGGTGCACATCATTACTCGCATGGGAGCACGCCGTTCACGATGCCTTGTCGATCATGTTCTGATTAGTTGGCCAATGCTTGGTGCGACAGGTTCCCAAACAGGAGCACACCCACGGGGCCGGAAAAGTCGACGACGTTGTTGCTGTAAGAAGACACCATGTAACGTTACTCTGGACTCAGGCCTCTTGAGGGCCTTTGGACGTTGGCGGAAGTTAAGCCAGCAGACTACGCGTGTGAATTTGAATACG                    ]
[+] EMBL CF340100             [  TCGAAGAG ACCTCTCC CTCT AAAGCAGTTGCGGTGAGAACC AGACGCCG ACATGTGCTGGAAAGGTCCTAGCAACGTGATGGAGCGGGTACTGGCAGCTTTCATGTTTTGTGGCTGCTCCTTCTGCAGTGGTCCGGTGCAGCTAGCGCCGGAAAATTGGGCAGCCGCACGCCAGGCGTCGAACATGTCGACAGCTCTCCTC AGATGTCAGCTTGGTAGCGGCAAGTATTCATAGGCACGCACAGGTGATGTCGGTCAAGACAAAAGGGAAAACAAAAGGAAGAAGAGGTGCATCAAGCTGACATGGCCAGCGCCCCTGCAGCGAGACAGCTAGAGAGGTCGATCGGCACACGGTGCACATCATTACTCGCATGGGAGCACGCCGTTCACGATGCCTTGTCGATCATGTTCTGATTAGTTGGCCAATGCTTGGTGCGACAGGTTCCCAAACAGGAGCACACCCACGGGGCCGGAAAAGTCGACGACGTTGTTGCTGTAAGAAGACACCATGTAACGTTACTCTGGACTCAGGCCTCTTGAGGGCCTTTGGACGTTGGCGGAAGTTAAGCCAGCAGACTACGCGTGTGAATTTGAATACGGGACAGCGGAGGGACGGCGG]
[+] EMBL CF340150             [  TCGAAGAGTACCTCTCCACTCTCAAAGCAGTTGCGGTGAGAACCAAGACGCCG ACATGTGCTGGAAAGGTCCTAGCAACGTGATGGAGCGGGTACTGGCAGCTTTCATGTTTTGTGGCTGCTCCTTCTGCAGTGGTCCGGTGCAGCTAGCGCCGGAAAATTGGGCAGCCGCACGCCAGGCGTCGAACATGTCGACAGCTCTCCTC AGATGTCAGCTTGGTAGCGGCAAGTATTCATAGGCACGCACAGGTGATGTCGGTCAAGACAAAAGGGAAA                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CF338240             [                               GTTGCGGTGAGAACCAAGACGCCG ACATGTGCTGGAAAGGTCCTAGCAACGTGATGGAGCGGGTACTGGCAGCTTTCATGTTTTGTGGCTGCTCCTTCTGCAGTGGTCCGGTGCAGCTAGCGCCGGAAAATTGGGCAGCCGCACGCCAGGCGTCGAACATGTCGACAGCTCTCCTC AGATGTCAGCTTGGTAGCGGCAAGTATTCATAGGCACGCACAGGTGATGTCGGTCAAGACAAAAGGGAAAACAAAAGGAAGAAGAGGTGCATCAAGCTGACATGGCCAGCGCCCCTGCAGCGAGACAGCTAGAGAGGTCGATCGGCACACGGTGCACATCATTACTCGCATGGGAGCACGCCGTTCACGATGCCTTGTCGATCATGTTCTGATTAGTTGGCCAATGCTTGGTGCGACAGGTTCCCAAACAGGAGCACACCCACGGGGCCGGAAAAGTCGACGACGTTGTTGCTGTAAGAAGACACCATGTAACGTTA                                                                                                    ]
[+] EMBL CF339217             [                                    GGTGAGAACCAAGACGCCGTACATGTGCTGGAAAGGTCCTAGCAACGTGATGGAGCGGGTACTGGCAGCTTTCATGTTTTGTGGCTGCTCCTTCTGCAGTGGTCCGGTGCAGCTAGCGCCGGAAAATTGGGCAGCCGCACGCCAGGCGTCGAACATGTCGACAGCTCTCCTCTTTATGTCAACTTGGTAGCGGCAAGTATTCATAGGCACa                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CF339439             [                                                          ATGTGCTGGAAAGGTCCTAGCAACGTGATGGAGCGGGTACTGGCAGCTTTCATGTTTTGTGGCTGCTCCTTCTGCAGTGGTCCGGTGCAGCTAGCGCCGGAAAATTGGGCAGCCGCACGCCAGGCGTCGAACATG                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]


>consensus_9873#0 GCTCGAAGAGACCTCTCCCTCTAAAGCAGTTGCGGTGAGAACCAAGACGCCGACATGTGC TGGAAAGGTCCTAGCAACGTGATGGAGCGGGTACTGGCAGCTTTCATGTTTTGTGGCTGC TCCTTCTGCAGTGGTCCGGTGCAGCTAGCGCCGGAAAATTGGGCAGCCGCACGCCAGGCG TCGAACATGTCGACAGCTCTCCTCAGATGTCAGCTTGGTAGCGGCAAGTATTCATAGGCA CGCACAGGTGATGTCGGTCAAGACAAAAGGGAAAACAAAAGGAAGAAGAGGTGCATCAAG CTGACATGGCCAGCGCCCCTGCAGCGAGACAGCTAGAGAGGTCGATCGGCACACGGTGCA CATCATTACTCGCATGGGAGCACGCCGTTCACGATGCCTTGTCGATCATGTTCTGATTAG TTGGCCAATGCTTGGTGCGACAGGTTCCCAAACAGGAGCACACCCACGGGGCCGGAAAAG TCGACGACGTTGTTGCTGTAAGAAGACACCATGTAACGTTACTCTGGACTCAGGCCTCTT GAGGGCCTTTGGACGTTGGCGGAAGTTAAGCCAGCAGACTACGCGTGTGAATTTGAATAC GGGACAGCGGAGGGACGGCGG



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)