These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9888#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 571 fasta sequence [CGTATTTTATCTTTGTTACCTTTTCTTTATAATGAAAACTAATTTGATCCATGG-GAAATAAGCCTACTCCTTAATCAAATCGGAGCTGGAATATCTGTTCGATAAAGATGCAGATCTTGAGTCTATTGTTGAAAAAGTCAACAGGATTTCATTTTTGGAAAAGAATTGGATTGAATTCTTTTCGTTCATTTCCAATCCAATATGAAAAAACTTTTCAATATTTCGACCTTCCCGGAGGGAATTCTCCGGGAGAATCTGTTCTATCCATTCCATCTTTACCTATTTATTTCATCTATACCTAACCTATTTCATCATACGATAAGTTGTTCAAGATGGTGGAAAAGCAATTACTATCTAATATAGCTATTTGTGCAAGTGTTTTACGATTTGGAAGCAACTGCCTCTTGTACAAATATTGGATGAATCTATTATAAGAAACCCCATTGGCACGAGCTGCTGCATTGATCCGAGTAATCCACAAACGACGAAGATCTCTCTTGCGTTTACCTCTATCTCGGTGGGCGGAAACTAAGGCTCTAGCTTTCCGTTGGTTAGCAGTTCGAAAAAGTTC] [+] EMBL CF340720 [CGTATTTTATCTTTGTTACCTTTTCTTTATAATGAAAAC AATTTGATCCATGG GAAATAAGCCTACTCCTTAATCAAATCGGAGCTGGAATATCTGTTCGATAAAGATGCAGATCTTGAGTCTATTGTTGAAAAAGTCAACAGGATTTCATTTTTGGAAAAGAATTGGATTGAATTCTTTTCGTTCATTTCCAATCCAATATGAAAAAACTTTTCAATATTTCGACCTTCCCGGAGGGAATTCTCCGGGAGAATCTGTTCTATCCATTCCATCTTTACCTATTTATTTCATCTATACCTAACCTATTTCATCATACGATAAGTTGTTCAAGATGGTGGAAAAGCAATTACTATCTAATATAGCTATTTGTGCAAGTGTTTTACGATTTGGAAGCAACTGCCTCTTGTACAAATATTGGATGAATCTATTATAAGAAACCCCATTGGCACGAGCTGCTGCATTGATCCGAGTAATCCACAAACGACGAAGATCTCTCTTGCGTTTACCTCTATCTCGGTGGGCGGAAACTA ] [+] EMBL CF338833 [ GTATTTTATCTTTGTTACCTTTTCTTTATAATGAAAACTAATTTGATCCTTGG GAAATAAGCCTACTCCTTAATCAAATCGGAGCTGGAATATCTGTTCGATAAAGATGCAGATCTTGAGTCTATTGTTGAAAAAGTCAACAGGATTTCATTTTTGGAAAAGAATTGGATTGAATTCTTTTCGTTCATTTCCAATCCAATATGAAAAAACTTTTCAATATTTCGACCTTCCCGGAGGGAATTCTCCGGGAGAATCTGTTCTATCCATTCCATCTTTACCTATTTATTTCATCTATACCTAACCTATTTCATCATACGATAAGTTGTTCAAGATGGTGGAAAAGCAATTACTATCTAATATAGCTATTTGTGCAAGTGTTTTACGATTTGGAAGCAACTGCCTCTTGTACAAATATTGGATGAATCTATTATAAGAAACCCCATTGGCACGAGCTGCTGCATTGATCCGAGTAATCCACAAACGACGAAGATCTCTCTTGCGTTTACCTCTATCTCGGTGGGCGGAAACTAAGGCTCTAGCTTTCCGTTGGTTAGC ] [+] EMBL CF338435 [ GTATTCTATTTTTGTTACCTTTTCTTTATAATGAAAACTAATTTGATCCATGGTTAAAT AGCCTACTCCTTAATCAAATCGGAGCTGGAATATCTGTTCGATAAAGATGCAGATCTTGAGTCTATTGTTGAAAAAGTCAACAGGATTTCATTTTTGGAAAAGAATTGGATTGAATTCTTTTCGTTCATTTCCAATCCAATATGAAAAAACTTTTCAATATTTCGACCTTCCCGGAGGGAATTCTCCGGGAGAATCTGTTCTATCCATTCCATCTTTACCTATTTATTTCATCTATACCTAACCTATTTCATCATACGATAAGTTGTTCAAGATGGTGGAAAAGCAATTACTATCTAATATAGCTATTTGTGCAAGTGTTTTACGATTTGGAAGCAACTGCCTCTTGTACAAATATTGGATGAATCTATTATAAGAAACCCCATTGGCACGAGCTGCTGCATTGATCCGAGTAATCCACAAACGACGAAGATCTCTCTTGCGTTTACCTCTATCTCGGTGGGCGGAAACTAAGGCTC ] [+] EMBL CF340621 [ TTATAATGAAAACTAATTTGATCCATGG GAAATAAGCCTACTCCTTAATCAAATCGGAGCTGGAATATCTGTTCGATAAAGATGCAGATCTTGAGTCTATTGTTGAAAAAGTCAACAGGATTTCATTTTTGGAAAAGAATTGGATTGAATTCTTTTCGTTCATTTCCAATCCAATATGAAAAAACTTTTCAATATTTCGACCTTCCCGGAGGGAATTCTCCGGGAGAATCTGTTCTATCCATTCCATCTTTACCTATTTATTTCATCTATACCTAACCTATTTCATCATACGATAAGTTGTTCAAGATGGTGGAAAAGCAATTACTATCTAATATAGCTATTTGTGCAAGTGTTTTACGATTTGGAAGCAACTGCCTCTTGTACAAATATTGGATGAATCTATTATAAGAAACCCCATTGGCACGAGCTGCTGCATTGATCCGAGTAATCCACAAACGACGAAGATCTCTCTTGCGTTTACCTCTATCTCGGTGGGCGGAAACTAAGGCTCTAGCTTTCCGTTGGTTAGCAG ] [+] EMBL CF340742 [ TATAATGAAAACTAATTTGATCCATGG GAAATAAGCCTACTCCTTAATCAAATCGGAGCTGGAATATCTGTTCGATAAAGATGCAGATCTTGAGTCTATTGTTGAAAAAGTCAACAGGATTTCATTTTTGGAAAAGAATTGGATTGAATTCTTTTCGTTCATTTCCAATCCAATATGAAAAAACTTTTCAATATTTCGACCTTCCCGGAGGGAATTCTCCGGGAGAATCTGTTCTATCCATTCCATCTTTACCTATTTATTTCATCTATACCTAACCTATTTCATCATACGATAAGTTGTTCAAGATGGTGGAAAAGCAATTACTATCTAATATAGCTATTTGTGCAAGTGTTTTACGATTTGGAAGCAACTGCCTCTTGTACAAATATTGGATGAATCTATTATAAGAAACCCCATTGGCACGAGCTGCTGCATTGATCCGAGTAATCCACAAACGACGAAGATCTCTCTTGCGTTTACCTCTATCTCGGTGGGCGGAAACTAAGGCTCTAGCTTTCCGTTGGTTA ] [+] EMBL CF339107 [ AATGAAAACTAATTTGATCCATGG GAAATAAGCCTACTCCTTAATCAAATCGGAGCTGGAATATCTGTTCGATAAAGATGCAGATCTTGAGTCTATTGTTGAAAAAGTCAACAGGATTTCATTTTTGGAAAAGAATTGGATTGAATTCTTTTCGTTCATTTCCAATCCAATATGAAAAAACTTTTCAATATTTCGACCTTCCCGGAGGGAATTCTCCGGGAGAATCTGTTCTATCCATTCCATCTTTACCTATTTATTTCATCTATACCTAACCTATTTCATCATACGATAAGTTGTTCAAGATGGTGGAAAAGCAATTACTATCTAATATAGCTATTTGTGCAAGTGTTTTACGATTTGGAAGCAACTGCCTCTTGTACAAATATTGGATGAATCTATTATAAGAAACCCCATTGGCACGAGCTGCTGCATTGATCCGAGTAATCCACAAACGACGAAGATCTCTCTTGCGTTTACCTCTATCTCGGTGGGCGGAAACTAAGGCTCTAGCTTTCCGTTGGTTAGCAGTTCGAAAAAGTTC] [+] EMBL CF338490 [ TGTTCGATAAAGATGCAGATCTTGAGTCTATTGTTGAAAAAGTCAACAGGATTTCATTTTTGGAAAAGAATTGGATTGAATTCTTTTCGTTCATTTCCAATCCAATATGAAAAAACTTTTCAATATTTCGACCTTCCCGGAGGGAATTCTCCGGGAGAATCTGTTCTATCCATTCCATCTTTACCTATTTATTTCATCTATACCTAACCTATTTCATCATACGATAAGTTGTTCAAGATGGTGGAAAAGCAATTACTATCTAATATAGCTATTTGTGCAAGTGTTTTACGATTTGGAAGCAACTGCCTCTTGTACAAATATTGGATGAATCTATTATAAGAAACCCCATTGGCACGAGCTGCTGCATTGATCCGAGTAATCCACAAACGACGAAGATCTCTCTTGCGTTTACCTCTATCTCGGTGGGCGGAAACTAAGGCTC ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||