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Oryza sativa
cluster # 9907 cluster # 9907       Sequences # 7       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9907#0 length = 1602 sequences # 5  
consensus_9907#1 length = 727 sequences # 1  
consensus_9907#2 length = 362 sequences # 1  

consensusID : consensus_9907#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1602
fasta sequence
                              [GTTGTGCTCCCCGTCCACTCCTCGTCAGCCCCTCTCCACCGTCGCTCTCTTCGCCTTCGGCGCAGGCCTCCTCGCCTACGGCGTCCACCTCTCCTACGCCCACGTCGAGCCCCAGCGGGCGCGCACGCTCGCCCGCGACCAGTTCGTCCGCGATTACCTCAAAAGGAAGTACGACAAGTAGCACACGGCCTCCCCCCCTCCCCCCAACGAGATCCCCTTCCCGCTCAATTTCTTGGGAGGGGTGGGGGAGCGATGGCTTTGGCCCCCGCGAGCTCGGGCAGTGGGCCGGTGGTTACGGAGGTGGAGATGAACGCCGGCGCCGACCAGGGTGCCACCGGCACCGTGCGTGCCACCGTCGTGCAGGCCTGCACCGTGTTCTACGACACCCCTGCGACTCTCGATAAAGCAGAGAAACTGGTAGCTGAAGCAGCTGGATATGGTTCACAGATAGTTCTATTTCCAGAAGTCTTTGTTGGTGGTTACCCTCATGGATCTACCTTTGGACTGACTATTGGCAATCGATCTGCCAAGGGAAAGGAAGACTTCCATAAATATCATGCAGCTGCTATAGATGTGCCTGGTCCAGAGGTGACCCGCTTAGCTGCATTGGCTGGAAAATACAAGATTTTCTTGGTGATGGGGGTGGTTGAAAGGGTAGGGTACACACTATATAATACAGTGCTCTTCTTTGATCCTCTGGGGAAATACCTCGGGAAACACCGCAAGGTCATGCCTACTGGACTGGAACGAGTGTTTTGGGGGTTTGGGGATGGATCTACTATACCTGTTTATGATACTCCAATAGGGAAGATTGGTGCCGTCATTTGCTGGGAAAACAGAATGCCACTTCTCAGGACAGCAATGTACGCTAAAGGTGTTCAGATATACTGTGCTCCAACTGCTGATTTCTCGCCTAGTTGGCAGGCCTCCATGACGCATATTGCCGTTGAAGGGGGATGCTTTGTACTTTCTGCAAACCAGTTTTGTCGCAGAAAGAACTATCCACCAGCGCCTGAATATACTTTTGGTGGCCTTGATGAAGAGCCATCCCCAGAATCTGTTATTTGGCCTGGAGG-AAGTTCCATCGTCTCACCATCTGGAACA-GTTCTGGCA-G-GTCCAAAC-TATGAAGGCGAGGGCCT-CCTCACAG-CT-GACTTGGACCTTGGAGAAATTGCTCGAGCTAAGTTTGATTTCGACGTCGTGGGACACTATGCACGACCCGAGGTGCTGAGCCTGACCGTGAAAACCGAATCAAAGCTGCCCGTTTCTTTT-ACTTCTGCTGCAGAGAAAAATTCTGCTGCAAAGAGTGACGGTATCTCTAGGACCTGATGGCCATTAATCTTCCATCGCGGTGTGCAATAAAATTGTCAGCTGGCCAGTGTTGGTATCACATGAATAATCTGTCTTTAGTTTCTTGTAAAGATTTGGAGACGATGCTTCCCTGATAAACAATTGGTGCCTATAGTGCTGTAATACTCGTCTGAAAATCGTGTCATGTTTCTTCCTCTTATTCGTTAGTGAAGACGTCCCAACTCCCAAATGTAGATTGCGATAACACAGTACTCAGTATTC-ATTTCCAAC-AATCATACAGTATTCTACAAAAAA]

[+] EMBL AK058965             [GTTGTGCTCCCCGTCCACTCCTCGTCAGCCCCTCTCCACCGTCGCTCTCTTCGCCTTCGGCGCAGGCCTCCTCGCCTACGGCGTCCACCTCTCCTACGCCCACGTCGAGCCCCAGCGGGCGCGCACGCTCGCCCGCGACCAGTTCGTCCGCGATTACCTCAAAAGGAAGTACGACAAGTAGCACACGGCCTCCCCCCCTCCCCCCAACGAGATCCCCTTCCCGCTCAATTTCTTGGGAGGGGTGGGGGAGCGATGGCTTTGGCCCCCGCGAGCTCGGGCAGTGGGCCGGTGGTTACGGAGGTGGAGATGAACGCCGGCGCCGACCAGGGTGCCACCGGCACCGTGCGTGCCACCGTCGTGCAGGCCTGCACCGTGTTCTACGACACCCCTGCGACTCTCGATAAAGCAGAGAAACTGGTAGCTGAAGCAGCTGGATATGGTTCACAGATAGTTCTATTTCCAGAAGTCTTTGTTGGTGGTTACCCTCATGGATCTACCTTTGGACTGACTATTGGCAATCGATCTGCCAAGGGAAAGGAAGACTTCCATAAATATCATGCAGCTGCTATAGATGTGCCTGGTCCAGAGGTGACCCGCTTAGCTGCATTGGCTGGAAAATACAAGATTTTCTTGGTGATGGGGGTGGTTGAAAGGGTAGGGTACACACTATATAATACAGTGCTCTTCTTTGATCCTCTGGGGAAATACCTCGGGAAACACCGCAAGGTCATGCCTACTGGACTGGAACGAGTGTTTTGGGGGTTTGGGGATGGATCTACTATACCTGTTTATGATACTCCAATAGGGAAGATTGGTGCCGTCATTTGCTGGGAAAACAGAATGCCACTTCTCAGGACAGCAATGTACGCTAAAGGTGTTCAGATATACTGTGCTCCAACTGCTGATTTCTCGCCTAGTTGGCAGGCCTCCATGACGCATATTGCCGTTGAAGGGGGATGCTTTGTACTTTCTGCAAACCAGTTTTGTCGCAGAAAGAACTATCCACCAGCGCCTGAATATACTTTTGGTGGCCTTGATGAAGAGCCATCCCCAGAATCTGTTATTTGGCCTGGAGG AAGTTCCATCGTCTCACCATCTGGAACA GTTCTGGCA G GTCCAAAC TATGAAGGCGAGGGCCT CCTCACAG CT GACTTGGACCTTGGAGAAATTGCTCGAGCTAAGTTTGATTTCGACGTCGTGGGACACTATGCACGACCCGAGGTGCTGAGCCTGACCGTGAAAACCGAATCAAAGCTGCCCGTTTCTTTT ACTTCTGCTGCAGAGAAAAATTCTGCTGCAAAGAGTGACGGTATCTCTAGGACCTGATGGCCATTAATCTTCCATCGCGGTGTGCAATAAAATTGTCAGCTGGCCAGTGTTGGTATCACATGAATAATCTGTCTTTAGTTTCTTGTAAAGATTTGGAGACGATGCTTCCCTGATAAACAATTGGTGCCTATA                                                                                                                                               ]
[+] EMBL AK069855             [                 CTCCTCGTCAGCTCCTCTCCACCGTCGCTCTCTTCGCCTTCGGCGCAGGCCTCCTCGCCTACGGCGTCCACCTCTCCTACGCCCACGTCGAGCCCCAGCGGGCGCGCACGCTCGCCCGCGACCAGTTCGTCCGCGATTACCTCAAAAGGAAGTACGACAAGTAG  CACGGCCTCCCCCCCTCCCCCCAACGAGATCCCCTTCCCGCTCAATTTCTTGGGAGGGGTGGGGGAGCGATGGCTTTGGCCCCCGCGAGCTCGGGCAGTGGGCCGGTGGTTACGGAGGTGGAGATGAACGCCGGCGCCGACCAGGGTGCCACCGGCACCGTGCGTGCCACCGTCGTGCAGGCCTGCACCGTGTTCTACGACACCCCTGCGACTCTCGATAAAGCAGAGAAACTGGTAGCTGAAGCAGCTGGATATGGTTCACAGATAGTTCTATTTCCAGAAGTCTTTGTTGGTGGTTACCCTCATGGATCTACCTTTGGACTGACTATTGGCAATCGATCTGCCAAGGGAAAGGAAGACTTCCATAAATATCATGCAGCTGCTATAGATGTGCCTGGTCCAGAGGTGACCCGCTTAGCTGCATTGGCTGGAAAATACAAGATTTTCTTGGTGATGGGGGTGGTTGAAAGGGTAGGGTACACACTATATAATACAGTGCTCTTCTTTGATCCTCTGGGGAAATACCTCGGGAAACACCGCAAGGTCATGCCTACTGGACTGGAACGAGTGTTTTGGGGGTTTGGGGATGGATCTACTATACCTGTTTATGATACTCCAATAGGGAAGATTGGTGCCGTCATTTGCTGGGAAAACAGAATGCCACTTCTCAGGACAGCAATGTACGCTAAAGGTGTTCAGATATACTGTGCTCCAACTGCTGATTTCTCGCCTAGTTGGCAGGCCTCCATGACGCATATTGCCGTTGAAGGGGGATGCTTTGTACTTTCTGCAAACCAGTTTTGTCGCAGAAAGAACTATCCACCAGCGCCTGAATATACTTTTGGTGGCCTTGATGAAGAGCCATCCCCAGAATCTGTTATTTGGCCTGGAGG AAGTTCCATCGTCTCACCATCTGGAACA GTTCTGGCA G GTCCAAAC TATGAAGGCGAGGGCCT CCTCACAG CT GACTTGGACCTTGGAGAAATTGCTCGAGCTAAGTTTGATTTCGACGTCGTGGGACACTATGCACGACCCGAGGTGCTGAGCCTGACCGTGAAAACCGAATCAAAGCTGCCCGTTTCTTTT ACTTCTGCTGCAGAGAAAAATTCTGCTGCAAAGAGTGACGGTATATCTAGGACCTGATGGCCATTAATCTTCCATCGCGGTGTGCAATAAAATTGTCAGCTGGCCAGTGTTGGTATCACATGAATAATCTGTCTTTAGTTTCTTGTAAAGATTTGGAGACGATGCTTCCCTGATAAACAATTGGTGCCTATAGTGCTGTAATACTCGTCTGAAAATCGTGTCATGTTTCTTCCTCTTATTCGTTAGTGAAGACGTCCCAACTCCCAAATGTAGATTGCGATAACACAGTACTCAGTATTCAATTTCCAACAAATCATACAGTATTCTACAttc  ]
[+] EMBL CB684855             [                                                                                                                                TCGCCCTCGACCAGTTCGTCCGCGATTACCTCAAAAGGAAGTACGACAAGTAGCACACGGCCTCCCCCCCTCCCCCCAACGAGATCCCCTTCCCGCTCAATTTCTTGGGAGGGGTGGGGGAGCGATGGCTTTGGCCCCCGCGAGCTCGGGCAGTGGGCCGGTGGTTACGGAGGTGGAGATGAACGCCGGCGCCGACCAGGGTGCCACCGGCACCGTGCGTGCCACCGTCGTGCAGGCCTGCACCGTGTTCTACGACACCCCTGCGACTCTCGATAAAGCAGAGAAACTGGTAGCTGAAGCAGCTGGATATGGTTCACAGATAGTTCTATTTCCAGAAGTCTTTGTTGGTGGTTACCCTCATGGATCTACCTTTGGACTGACTATTGGCAATCGATCTGCCAAGGGAAAGGAAGACTTCCATAAATATCATGCAGCTGCTATAGATGTGCCTGGTCCAGAGGTGACCCGCTTAGCTGCATTGGCTGGAAAATACAAGATTTTCTTGGTGATGGGGGTGGTTGAAAGGGTAGGGTACACACTATATAATACAGTGCTCTTCCTTGATCCTCTGGGGAAATACCTCGGGAAACACCGCAAGGTCATGCCTACTGGACTGGAACGAGTGTTTTGGGGGTTTGGGGATGGATCTACTATACCTGTTTATGATACTCCAATAGGGAAGATTGGTGCCGTCATTTGCTGGGAAAACAGAATGCCACTTCTCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL BI812622             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ccTGATGAAGA CCATCCCCAGAATCTGTTATTT GCCTGGAGGAAAGTTCCATCGTCTCACCATCTGGAACA TTTCTGGCAGG GTCACAAC TATGAAGGCGAGGGCCTCCCTCACAG CT GACTTGGACCTTGGAGAAATTGCTCGAGCTAAGTTTGATTTCGACGTCGTGGGACACTATGCACGACCCGAGGTGCTGAGCCTGACCGTGAAAACCGAATCAAAGCTGCCCGTTTCTTTTGACTTCTGCTGCAGAGAAAAATTCTGCTGCAAAGAGTGACGGTATCTCTAGGACCTGATGGCCATTAATCTTCCATCGCGGTGTGCAATAAAATTGTCAGCTGGCCAGTGTTGGTATTACATGAATAATCTGTCTTTAGTTTCTTGTAAAGATTTGGAGACGATGCTTCCCTGATAAACCATTGGTGCCTATAGTGCTGTAATACTCGTCTGAAAATCGTGTCATGTTTCTTCCTCTTATTCGTTAGTGAAGACGTCCC ACTCCC AATGTAGATTGCGATAACACAGTACTCAGTATTC ATTTCCAAC AATCATACAGTATTCTAAAAAAAA]
[+] EMBL BI813568             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ACAGGTTCT GCA GTGTCCAAACGTATGAAGGCGAGGGCCTCCCTCACAGTCTGGACTTGGACCTTGGAGAAATTGCTCGAGCTAAGTTTGATTTCGACGTCGTGGGACACTATGCACGACCCGAGGTGCTGAGCCTGACCGTGAAAACCGAATCAAAGCTGCCCGTTTCTTTT ACTTCTGCTGCAGAGAAAAATTCTGCTGCAAAGAGTGACGGTATCTCTAGGACCTGATGGCCATTAATCTTCCATCGCGGTGTGCAATAAAATTGTCAGCTGGCCAGTGTTGGTATTACATGAATAATCTGTCTTTAGTTTCTTGTAAAGATTTGGAGACGATGCTTCCCTGATAAAC ATTGGTGCCTATAGTGCTGTAATACTCGTCTGAAAATCGTGTCATGTTTCTTCCTCTTATTCGTTAGTGAAGACGTCCCAACTCCCAAATGTAGATTGCGATAACACAGTACTCAGTATTC ATTTCCAAC AATCATACAGTATTCTACAAAAAA]


>consensus_9907#0 GTTGTGCTCCCCGTCCACTCCTCGTCAGCCCCTCTCCACCGTCGCTCTCTTCGCCTTCGG CGCAGGCCTCCTCGCCTACGGCGTCCACCTCTCCTACGCCCACGTCGAGCCCCAGCGGGC GCGCACGCTCGCCCGCGACCAGTTCGTCCGCGATTACCTCAAAAGGAAGTACGACAAGTA GCACACGGCCTCCCCCCCTCCCCCCAACGAGATCCCCTTCCCGCTCAATTTCTTGGGAGG GGTGGGGGAGCGATGGCTTTGGCCCCCGCGAGCTCGGGCAGTGGGCCGGTGGTTACGGAG GTGGAGATGAACGCCGGCGCCGACCAGGGTGCCACCGGCACCGTGCGTGCCACCGTCGTG CAGGCCTGCACCGTGTTCTACGACACCCCTGCGACTCTCGATAAAGCAGAGAAACTGGTA GCTGAAGCAGCTGGATATGGTTCACAGATAGTTCTATTTCCAGAAGTCTTTGTTGGTGGT TACCCTCATGGATCTACCTTTGGACTGACTATTGGCAATCGATCTGCCAAGGGAAAGGAA GACTTCCATAAATATCATGCAGCTGCTATAGATGTGCCTGGTCCAGAGGTGACCCGCTTA GCTGCATTGGCTGGAAAATACAAGATTTTCTTGGTGATGGGGGTGGTTGAAAGGGTAGGG TACACACTATATAATACAGTGCTCTTCTTTGATCCTCTGGGGAAATACCTCGGGAAACAC CGCAAGGTCATGCCTACTGGACTGGAACGAGTGTTTTGGGGGTTTGGGGATGGATCTACT ATACCTGTTTATGATACTCCAATAGGGAAGATTGGTGCCGTCATTTGCTGGGAAAACAGA ATGCCACTTCTCAGGACAGCAATGTACGCTAAAGGTGTTCAGATATACTGTGCTCCAACT GCTGATTTCTCGCCTAGTTGGCAGGCCTCCATGACGCATATTGCCGTTGAAGGGGGATGC TTTGTACTTTCTGCAAACCAGTTTTGTCGCAGAAAGAACTATCCACCAGCGCCTGAATAT ACTTTTGGTGGCCTTGATGAAGAGCCATCCCCAGAATCTGTTATTTGGCCTGGAGGAAGT TCCATCGTCTCACCATCTGGAACAGTTCTGGCAGGTCCAAACTATGAAGGCGAGGGCCTC CTCACAGCTGACTTGGACCTTGGAGAAATTGCTCGAGCTAAGTTTGATTTCGACGTCGTG GGACACTATGCACGACCCGAGGTGCTGAGCCTGACCGTGAAAACCGAATCAAAGCTGCCC GTTTCTTTTACTTCTGCTGCAGAGAAAAATTCTGCTGCAAAGAGTGACGGTATCTCTAGG ACCTGATGGCCATTAATCTTCCATCGCGGTGTGCAATAAAATTGTCAGCTGGCCAGTGTT GGTATCACATGAATAATCTGTCTTTAGTTTCTTGTAAAGATTTGGAGACGATGCTTCCCT GATAAACAATTGGTGCCTATAGTGCTGTAATACTCGTCTGAAAATCGTGTCATGTTTCTT CCTCTTATTCGTTAGTGAAGACGTCCCAACTCCCAAATGTAGATTGCGATAACACAGTAC TCAGTATTCATTTCCAACAATCATACAGTATTCTACAAAAAA



consensusID : consensus_9907#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 727
fasta sequence
                              [GGATGGATCTACTATACCTGTTTATGATACTCCAATAGGGAAGATTGGTGCCGTCATTTGCTGGGAAAACAGAATGCCACTTCTCAGGACAGCAATGTACGCTAAAGGTGTTCAGATATACTGTGCTCCAACTGCTGATTTCTCGCCTAGTTGGCAGGCCTCCATGACGCATATTGCCGTTGAAGGGGGATGCTTTGTACTTTTTGCAAACCAGTTTTGTCGCAGAAAGAACTATCCCCCAGCGCCTGAATATACTTTTGGTGGCCTTGATGAAGAGCCATCCCCAGAATCTGTTATTTGGCCTGGAGGAAGTTCCATCGTCTCCCCATCTGGAACAGTTTTGGCAGGTCCAAACTATGAAGGGGAGGGCCTCCTCCCAGCTGACTTGGACCTTGGAGAAATTGCTCGAGCTAAGTTTGATTTTGACGTCGTGGGACACTATGCACGACCCGAGGTGCTGAGCCTGCCCGTGAAAACCGAATCAAAGCTGCCCGTTTTTTTTACTTTTGCTGCAGAGAAAAATTTTGCTGCAAAGAGTGACGGTATTTTTAGGACCTGATGGCCATTAATCTTCCATCGCGGTGTGCAATAAAATTGTCAGCTGGCCAGTGTGGGTATCCCATGAATAATCTGTCTTTAGTTTCTTGTAAAGATTTGGAGACGATGCTTCCCTGATAAACAAAGGGTGCCTATAGTGCTGTAAAAAAAAAAAAAAAACTAAAAAGGA]

[-] EMBL CB684856             [GGATGGATCTACTATACCTGTTTATGATACTCCAATAGGGAAGATTGGTGCCGTCATTTGCTGGGAAAACAGAATGCCACTTCTCAGGACAGCAATGTACGCTAAAGGTGTTCAGATATACTGTGCTCCAACTGCTGATTTCTCGCCTAGTTGGCAGGCCTCCATGACGCATATTGCCGTTGAAGGGGGATGCTTTGTACTTTTTGCAAACCAGTTTTGTCGCAGAAAGAACTATCCCCCAGCGCCTGAATATACTTTTGGTGGCCTTGATGAAGAGCCATCCCCAGAATCTGTTATTTGGCCTGGAGGAAGTTCCATCGTCTCCCCATCTGGAACAGTTTTGGCAGGTCCAAACTATGAAGGGGAGGGCCTCCTCCCAGCTGACTTGGACCTTGGAGAAATTGCTCGAGCTAAGTTTGATTTTGACGTCGTGGGACACTATGCACGACCCGAGGTGCTGAGCCTGCCCGTGAAAACCGAATCAAAGCTGCCCGTTTTTTTTACTTTTGCTGCAGAGAAAAATTTTGCTGCAAAGAGTGACGGTATTTTTAGGACCTGATGGCCATTAATCTTCCATCGCGGTGTGCAATAAAATTGTCAGCTGGCCAGTGTGGGTATCCCATGAATAATCTGTCTTTAGTTTCTTGTAAAGATTTGGAGACGATGCTTCCCTGATAAACAAAGGGTGCCTATAGTGCTGTAAAAAAAAAAAAAAAACTAAAAAGGA]


>consensus_9907#1 GGATGGATCTACTATACCTGTTTATGATACTCCAATAGGGAAGATTGGTGCCGTCATTTG CTGGGAAAACAGAATGCCACTTCTCAGGACAGCAATGTACGCTAAAGGTGTTCAGATATA CTGTGCTCCAACTGCTGATTTCTCGCCTAGTTGGCAGGCCTCCATGACGCATATTGCCGT TGAAGGGGGATGCTTTGTACTTTTTGCAAACCAGTTTTGTCGCAGAAAGAACTATCCCCC AGCGCCTGAATATACTTTTGGTGGCCTTGATGAAGAGCCATCCCCAGAATCTGTTATTTG GCCTGGAGGAAGTTCCATCGTCTCCCCATCTGGAACAGTTTTGGCAGGTCCAAACTATGA AGGGGAGGGCCTCCTCCCAGCTGACTTGGACCTTGGAGAAATTGCTCGAGCTAAGTTTGA TTTTGACGTCGTGGGACACTATGCACGACCCGAGGTGCTGAGCCTGCCCGTGAAAACCGA ATCAAAGCTGCCCGTTTTTTTTACTTTTGCTGCAGAGAAAAATTTTGCTGCAAAGAGTGA CGGTATTTTTAGGACCTGATGGCCATTAATCTTCCATCGCGGTGTGCAATAAAATTGTCA GCTGGCCAGTGTGGGTATCCCATGAATAATCTGTCTTTAGTTTCTTGTAAAGATTTGGAG ACGATGCTTCCCTGATAAACAAAGGGTGCCTATAGTGCTGTAAAAAAAAAAAAAAAACTA AAAAGGA



consensusID : consensus_9907#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 362
fasta sequence
                              [CGTGCCGAATTCGGCACGAGCACTTCTCAGGACAGCAATGTACGCCAAAGGTGTTCAGATATACTGTGCTCCAACTGCTGATTTCTCGCCTAGTTGGCAGGCCTCCATGACGCACATTGCCGTTGAAGGGGGATGCTTTGTACTTTCTGCAAACCAGTTTTGTCGCAGAAAGAACTATCCACCAGCGCCTGAATATACTTTTGGTGGCCTTGATGAAGAGCCATCCCCAGAATCTGTTATTTGGCCTGGAGGAAGTTCCATCGTCTCACCATCTGGAACAGTTCTGGCAGGTCCAAACTATGAAGGCGAGGGCCTCCTCACAGCTGACTTGGACCTTGGAGAAATTGCTCGAGCTAAGTTTG]

[+] EMBL BE230092             [CGTGCCGAATTCGGCACGAGCACTTCTCAGGACAGCAATGTACGCCAAAGGTGTTCAGATATACTGTGCTCCAACTGCTGATTTCTCGCCTAGTTGGCAGGCCTCCATGACGCACATTGCCGTTGAAGGGGGATGCTTTGTACTTTCTGCAAACCAGTTTTGTCGCAGAAAGAACTATCCACCAGCGCCTGAATATACTTTTGGTGGCCTTGATGAAGAGCCATCCCCAGAATCTGTTATTTGGCCTGGAGGAAGTTCCATCGTCTCACCATCTGGAACAGTTCTGGCAGGTCCAAACTATGAAGGCGAGGGCCTCCTCACAGCTGACTTGGACCTTGGAGAAATTGCTCGAGCTAAGTTTG]


>consensus_9907#2 CGTGCCGAATTCGGCACGAGCACTTCTCAGGACAGCAATGTACGCCAAAGGTGTTCAGAT ATACTGTGCTCCAACTGCTGATTTCTCGCCTAGTTGGCAGGCCTCCATGACGCACATTGC CGTTGAAGGGGGATGCTTTGTACTTTCTGCAAACCAGTTTTGTCGCAGAAAGAACTATCC ACCAGCGCCTGAATATACTTTTGGTGGCCTTGATGAAGAGCCATCCCCAGAATCTGTTAT TTGGCCTGGAGGAAGTTCCATCGTCTCACCATCTGGAACAGTTCTGGCAGGTCCAAACTA TGAAGGCGAGGGCCTCCTCACAGCTGACTTGGACCTTGGAGAAATTGCTCGAGCTAAGTT TG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9907#0      GTTGTGCTCCCCGTCCACTCCTCGTCAGCCCCTCTCCACCGTCGCTCTCTTCGCCTTCGG 60
consensus_9907#1      ------------------------------------------------------------
consensus_9907#2      ------------------------------------------------------------
                                                                                  

consensus_9907#0      CGCAGGCCTCCTCGCCTACGGCGTCCACCTCTCCTACGCCCACGTCGAGCCCCAGCGGGC 120
consensus_9907#1      ------------------------------------------------------------
consensus_9907#2      ------------------------------------------------------------
                                                                                  

consensus_9907#0      GCGCACGCTCGCCCGCGACCAGTTCGTCCGCGATTACCTCAAAAGGAAGTACGACAAGTA 180
consensus_9907#1      ------------------------------------------------------------
consensus_9907#2      ------------------------------------------------------------
                                                                                  

consensus_9907#0      GCACACGGCCTCCCCCCCTCCCCCCAACGAGATCCCCTTCCCGCTCAATTTCTTGGGAGG 240
consensus_9907#1      ------------------------------------------------------------
consensus_9907#2      ------------------------------------------------------------
                                                                                  

consensus_9907#0      GGTGGGGGAGCGATGGCTTTGGCCCCCGCGAGCTCGGGCAGTGGGCCGGTGGTTACGGAG 300
consensus_9907#1      ------------------------------------------------------------
consensus_9907#2      ------------------------------------------------------------
                                                                                  

consensus_9907#0      GTGGAGATGAACGCCGGCGCCGACCAGGGTGCCACCGGCACCGTGCGTGCCACCGTCGTG 360
consensus_9907#1      ------------------------------------------------------------
consensus_9907#2      ------------------------------------------------------------
                                                                                  

consensus_9907#0      CAGGCCTGCACCGTGTTCTACGACACCCCTGCGACTCTCGATAAAGCAGAGAAACTGGTA 420
consensus_9907#1      ------------------------------------------------------------
consensus_9907#2      ------------------------------------------------------------
                                                                                  

consensus_9907#0      GCTGAAGCAGCTGGATATGGTTCACAGATAGTTCTATTTCCAGAAGTCTTTGTTGGTGGT 480
consensus_9907#1      ------------------------------------------------------------
consensus_9907#2      ------------------------------------------------------------
                                                                                  

consensus_9907#0      TACCCTCATGGATCTACCTTTGGACTGACTATTGGCAATCGATCTGCCAAGGGAAAGGAA 540
consensus_9907#1      ------------------------------------------------------------
consensus_9907#2      ------------------------------------------------------------
                                                                                  

consensus_9907#0      GACTTCCATAAATATCATGCAGCTGCTATAGATGTGCCTGGTCCAGAGGTGACCCGCTTA 600
consensus_9907#1      ------------------------------------------------------------
consensus_9907#2      ------------------------------------------------------------
                                                                                  

consensus_9907#0      GCTGCATTGGCTGGAAAATACAAGATTTTCTTGGTGATGGGGGTGGTTGAAAGGGTAGGG 660
consensus_9907#1      ------------------------------------------------------------
consensus_9907#2      ------------------------------------------------------------
                                                                                  

consensus_9907#0      TACACACTATATAATACAGTGCTCTTCTTTGATCCTCTGGGGAAATACCTCGGGAAACAC 720
consensus_9907#1      ------------------------------------------------------------
consensus_9907#2      ------------------------------------------------------------
                                                                                  

consensus_9907#0      CGCAAGGTCATGCCTACTGGACTGGAACGAGTGTTTTGGGGGTTTGGGGATGGATCTACT 780
consensus_9907#1      -----------------------------------------------GGATGGATCTACT 13
consensus_9907#2      ------------------------------------------------------------
                                                                                  

consensus_9907#0      ATACCTGTTTATGATACTCCAATAGGGAAGATTGGTGCCGTCATTTGCTGGGAAAACAGA 840
consensus_9907#1      ATACCTGTTTATGATACTCCAATAGGGAAGATTGGTGCCGTCATTTGCTGGGAAAACAGA 73
consensus_9907#2      ---------------------------------------------CGTGCCGAATTCGGC 15
                                                                    *    ***  * * 

consensus_9907#0      ATGC-CACTTCTCAGGACAGCAATGTACGCTAAAGGTGTTCAGATATACTGTGCTCCAAC 899
consensus_9907#1      ATGC-CACTTCTCAGGACAGCAATGTACGCTAAAGGTGTTCAGATATACTGTGCTCCAAC 132
consensus_9907#2      ACGAGCACTTCTCAGGACAGCAATGTACGCCAAAGGTGTTCAGATATACTGTGCTCCAAC 75
                      * *  ************************* *****************************

consensus_9907#0      TGCTGATTTCTCGCCTAGTTGGCAGGCCTCCATGACGCATATTGCCGTTGAAGGGGGATG 959
consensus_9907#1      TGCTGATTTCTCGCCTAGTTGGCAGGCCTCCATGACGCATATTGCCGTTGAAGGGGGATG 192
consensus_9907#2      TGCTGATTTCTCGCCTAGTTGGCAGGCCTCCATGACGCACATTGCCGTTGAAGGGGGATG 135
                      *************************************** ********************

consensus_9907#0      CTTTGTACTTTCTGCAAACCAGTTTTGTCGCAGAAAGAACTATCCACCAGCGCCTGAATA 1019
consensus_9907#1      CTTTGTACTTTTTGCAAACCAGTTTTGTCGCAGAAAGAACTATCCCCCAGCGCCTGAATA 252
consensus_9907#2      CTTTGTACTTTCTGCAAACCAGTTTTGTCGCAGAAAGAACTATCCACCAGCGCCTGAATA 195
                      *********** ********************************* **************

consensus_9907#0      TACTTTTGGTGGCCTTGATGAAGAGCCATCCCCAGAATCTGTTATTTGGCCTGGAGGAAG 1079
consensus_9907#1      TACTTTTGGTGGCCTTGATGAAGAGCCATCCCCAGAATCTGTTATTTGGCCTGGAGGAAG 312
consensus_9907#2      TACTTTTGGTGGCCTTGATGAAGAGCCATCCCCAGAATCTGTTATTTGGCCTGGAGGAAG 255
                      ************************************************************

consensus_9907#0      TTCCATCGTCTCACCATCTGGAACAGTTCTGGCAGGTCCAAACTATGAAGGCGAGGGCCT 1139
consensus_9907#1      TTCCATCGTCTCCCCATCTGGAACAGTTTTGGCAGGTCCAAACTATGAAGGGGAGGGCCT 372
consensus_9907#2      TTCCATCGTCTCACCATCTGGAACAGTTCTGGCAGGTCCAAACTATGAAGGCGAGGGCCT 315
                      ************ *************** ********************** ********

consensus_9907#0      CCTCACAGCTGACTTGGACCTTGGAGAAATTGCTCGAGCTAAGTTTGATTTCGACGTCGT 1199
consensus_9907#1      CCTCCCAGCTGACTTGGACCTTGGAGAAATTGCTCGAGCTAAGTTTGATTTTGACGTCGT 432
consensus_9907#2      CCTCACAGCTGACTTGGACCTTGGAGAAATTGCTCGAGCTAAGTTTG------------- 362
                      **** ******************************************             

consensus_9907#0      GGGACACTATGCACGACCCGAGGTGCTGAGCCTGACCGTGAAAACCGAATCAAAGCTGCC 1259
consensus_9907#1      GGGACACTATGCACGACCCGAGGTGCTGAGCCTGCCCGTGAAAACCGAATCAAAGCTGCC 492
consensus_9907#2      ------------------------------------------------------------
                                                                                  

consensus_9907#0      CGTTTCTTTTACTTCTGCTGCAGAGAAAAATTCTGCTGCAAAGAGTGACGGTATCTCTAG 1319
consensus_9907#1      CGTTTTTTTTACTTTTGCTGCAGAGAAAAATTTTGCTGCAAAGAGTGACGGTATTTTTAG 552
consensus_9907#2      ------------------------------------------------------------
                                                                                  

consensus_9907#0      GACCTGATGGCCATTAATCTTCCATCGCGGTGTGCAATAAAATTGTCAGCTGGCCAGTGT 1379
consensus_9907#1      GACCTGATGGCCATTAATCTTCCATCGCGGTGTGCAATAAAATTGTCAGCTGGCCAGTGT 612
consensus_9907#2      ------------------------------------------------------------
                                                                                  

consensus_9907#0      TGGTATCACATGAATAATCTGTCTTTAGTTTCTTGTAAAGATTTGGAGACGATGCTTCCC 1439
consensus_9907#1      GGGTATCCCATGAATAATCTGTCTTTAGTTTCTTGTAAAGATTTGGAGACGATGCTTCCC 672
consensus_9907#2      ------------------------------------------------------------
                                                                                  

consensus_9907#0      TGATAAACAATTGGTGCCTATAGTGCTGTAATACTCGTCTGAAAATCGTGTCATGTTTCT 1499
consensus_9907#1      TGATAAACAAAGGGTGCCTATAGTGCTGTAAAAAAAAAAAAAAAACTAAAAAGGA----- 727
consensus_9907#2      ------------------------------------------------------------
                                                                                  

consensus_9907#0      TCCTCTTATTCGTTAGTGAAGACGTCCCAACTCCCAAATGTAGATTGCGATAACACAGTA 1559
consensus_9907#1      ------------------------------------------------------------
consensus_9907#2      ------------------------------------------------------------
                                                                                  

consensus_9907#0      CTCAGTATTCATTTCCAACAATCATACAGTATTCTACAAAAAA 1602
consensus_9907#1      -------------------------------------------
consensus_9907#2      -------------------------------------------
                                                                 




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)