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Oryza sativa
cluster # 9912 cluster # 9912       Sequences # 7       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9912#0 length = 891 sequences # 1  
consensus_9912#1 length = 746 sequences # 1  
consensus_9912#2 length = 698 sequences # 3  
consensus_9912#3 length = 676 sequences # 2  

consensusID : consensus_9912#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 891
fasta sequence
                              [AAGAGACTCGCAACGCAGGTCAGAGCGGAAGGGGAGAAGAAGGAGGTGCTCCTCTCGAGTTTGGAGAAAATTTCCCCCGCAGAGGCCTCCGCTTGCTCGCGGAGATGGCGATGACCGTCGAAGGTGAGGGTCGCTCTGAGTTTCCCTCCCCCATCTAAGATTTGCTCAATTGCTAGTCTGGTTCTGTTCCCGATTTCGGCGTCGTTTGGGCTCTCCGATTCGAGTGTCGGGGTGGCGGGGGATTGGGCGGCTAGGGTTCCGGTTCGAGTTTGGTGTTACGATTGGCTGTGCTCGCTGGACTTGCATTTATGTTCTCAACAAGTATTCTTTTGCAAATACTGGCTTGTGCTCTGTACAATAATTGGTGGCCTATGTTAGCAGCTCTTATGTATGTCCTTGTACCGATGCCATGCCTATTCTTCGGTGGTGGATCTACCCAGTTCTTTACTAGCAGAGATGGTGGAGGGTGGTTCAATGCTGCAAAATTCCTGACTGGTGCATCTGCCATGGGAAGCATTGCAATCCCAGCAATTCTGAGGCACGCTGGCCTAATTGAGACTGGAGCCATGTTCATCGAGTTCACGTCCTTCTTCATCCTTGTATGCACAGTGATGTGCTTCCATAGAGCTACGCTGGATGAAGATTGGTAAAAGGCTCGAGGCACATGGACACAAGAAGGTAAATCTGTTTCATGGTTTGCTTCTCAGCACGTACAAGAGAAATTCCTTAGTGGACACTAACATGGACATGTGTACAAAGAAGCAAATATTTGAGTTGGCGTGACTGTCTGTATAAATGCTCAAAGATTTGCTGATCTAGCGACAATGCCAATGTTCTATGTGCACTTTTCATGTGAATACTCCTCACATGATCTATGGGCAACCTGTCAGC]

[+] EMBL AK071603             [AAGAGACTCGCAACGCAGGTCAGAGCGGAAGGGGAGAAGAAGGAGGTGCTCCTCTCGAGTTTGGAGAAAATTTCCCCCGCAGAGGCCTCCGCTTGCTCGCGGAGATGGCGATGACCGTCGAAGGTGAGGGTCGCTCTGAGTTTCCCTCCCCCATCTAAGATTTGCTCAATTGCTAGTCTGGTTCTGTTCCCGATTTCGGCGTCGTTTGGGCTCTCCGATTCGAGTGTCGGGGTGGCGGGGGATTGGGCGGCTAGGGTTCCGGTTCGAGTTTGGTGTTACGATTGGCTGTGCTCGCTGGACTTGCATTTATGTTCTCAACAAGTATTCTTTTGCAAATACTGGCTTGTGCTCTGTACAATAATTGGTGGCCTATGTTAGCAGCTCTTATGTATGTCCTTGTACCGATGCCATGCCTATTCTTCGGTGGTGGATCTACCCAGTTCTTTACTAGCAGAGATGGTGGAGGGTGGTTCAATGCTGCAAAATTCCTGACTGGTGCATCTGCCATGGGAAGCATTGCAATCCCAGCAATTCTGAGGCACGCTGGCCTAATTGAGACTGGAGCCATGTTCATCGAGTTCACGTCCTTCTTCATCCTTGTATGCACAGTGATGTGCTTCCATAGAGCTACGCTGGATGAAGATTGGTAAAAGGCTCGAGGCACATGGACACAAGAAGGTAAATCTGTTTCATGGTTTGCTTCTCAGCACGTACAAGAGAAATTCCTTAGTGGACACTAACATGGACATGTGTACAAAGAAGCAAATATTTGAGTTGGCGTGACTGTCTGTATAAATGCTCAAAGATTTGCTGATCTAGCGACAATGCCAATGTTCTATGTGCACTTTTCATGTGAATACTCCTCACATGATCTATGGGCAACCTGTCAGC]


>consensus_9912#0 AAGAGACTCGCAACGCAGGTCAGAGCGGAAGGGGAGAAGAAGGAGGTGCTCCTCTCGAGT TTGGAGAAAATTTCCCCCGCAGAGGCCTCCGCTTGCTCGCGGAGATGGCGATGACCGTCG AAGGTGAGGGTCGCTCTGAGTTTCCCTCCCCCATCTAAGATTTGCTCAATTGCTAGTCTG GTTCTGTTCCCGATTTCGGCGTCGTTTGGGCTCTCCGATTCGAGTGTCGGGGTGGCGGGG GATTGGGCGGCTAGGGTTCCGGTTCGAGTTTGGTGTTACGATTGGCTGTGCTCGCTGGAC TTGCATTTATGTTCTCAACAAGTATTCTTTTGCAAATACTGGCTTGTGCTCTGTACAATA ATTGGTGGCCTATGTTAGCAGCTCTTATGTATGTCCTTGTACCGATGCCATGCCTATTCT TCGGTGGTGGATCTACCCAGTTCTTTACTAGCAGAGATGGTGGAGGGTGGTTCAATGCTG CAAAATTCCTGACTGGTGCATCTGCCATGGGAAGCATTGCAATCCCAGCAATTCTGAGGC ACGCTGGCCTAATTGAGACTGGAGCCATGTTCATCGAGTTCACGTCCTTCTTCATCCTTG TATGCACAGTGATGTGCTTCCATAGAGCTACGCTGGATGAAGATTGGTAAAAGGCTCGAG GCACATGGACACAAGAAGGTAAATCTGTTTCATGGTTTGCTTCTCAGCACGTACAAGAGA AATTCCTTAGTGGACACTAACATGGACATGTGTACAAAGAAGCAAATATTTGAGTTGGCG TGACTGTCTGTATAAATGCTCAAAGATTTGCTGATCTAGCGACAATGCCAATGTTCTATG TGCACTTTTCATGTGAATACTCCTCACATGATCTATGGGCAACCTGTCAGC



consensusID : consensus_9912#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 746
fasta sequence
                              [AGTCGCTCGCANGTCAGAGCGGANNGGGAGAAGAAGGANGTGCTCCTCTCGAGTTTGGAGAAAATTTCCCCCGCAGANGCCTCCGCTTGCTCGCGGAGATGGCGATGACCGTCGAANTGCTCGCTGGACTTGCATTTATGTTCTCNACAAGTATTCTTTTGCAAATACTGGCTTGTGCTCTGTACAATAATTGGTGGCCTATGTTNGCAGCTCTTATGTATGTCCTTGTACCGATGCCATGCCTATTCTTCGGTGGTGGATCTACCCNGTTCTTGACTAACANAAATGGTGGANGGTGGTTCAATGCTGCNAAATTCCTGACTGGTGCNTCTGCCNTGGGAAGCATTGCAATCCCNCCAATTCTGANGCACGCTGGCCTAATTGANACTGGAGCCNTGTTCATCNANTTCACGTCCTTCTTCATCCNTGTATGCACNGTGATGTNCTTCCCTANANCTACCCNGGATGAAAATTGGTNAAANGGCNAAGCCCNTTGACACCAAAAGTTNATCTGTTTCNTGGTTTGCTCCCCCCNCNTTCAAAAAAAAATCCCTNATGGANACTAACCTGGACATGTTTTCCAAAAAACNATATTTNAATTNGCGTTACTGTCTGTTTTAATGCTCCAAAATTGCTGATCTACCACAATGCCCATGTTCTATGTTCCTTCCCGTTAATACCCCCCCATGATCTATGGGCCACTGTCCCCCCCCTTTNAAATNCATCAAACAACAGGCNGGGCCNGT]

[+] EMBL BE229680             [AGTCGCTCGCANGTCAGAGCGGANNGGGAGAAGAAGGANGTGCTCCTCTCGAGTTTGGAGAAAATTTCCCCCGCAGANGCCTCCGCTTGCTCGCGGAGATGGCGATGACCGTCGAANTGCTCGCTGGACTTGCATTTATGTTCTCNACAAGTATTCTTTTGCAAATACTGGCTTGTGCTCTGTACAATAATTGGTGGCCTATGTTNGCAGCTCTTATGTATGTCCTTGTACCGATGCCATGCCTATTCTTCGGTGGTGGATCTACCCNGTTCTTGACTAACANAAATGGTGGANGGTGGTTCAATGCTGCNAAATTCCTGACTGGTGCNTCTGCCNTGGGAAGCATTGCAATCCCNCCAATTCTGANGCACGCTGGCCTAATTGANACTGGAGCCNTGTTCATCNANTTCACGTCCTTCTTCATCCNTGTATGCACNGTGATGTNCTTCCCTANANCTACCCNGGATGAAAATTGGTNAAANGGCNAAGCCCNTTGACACCAAAAGTTNATCTGTTTCNTGGTTTGCTCCCCCCNCNTTCAAAAAAAAATCCCTNATGGANACTAACCTGGACATGTTTTCCAAAAAACNATATTTNAATTNGCGTTACTGTCTGTTTTAATGCTCCAAAATTGCTGATCTACCACAATGCCCATGTTCTATGTTCCTTCCCGTTAATACCCCCCCATGATCTATGGGCCACTGTCCCCCCCCTTTNAAATNCATCAAACAACAGGCNGGGCCNGT]


>consensus_9912#1 AGTCGCTCGCANGTCAGAGCGGANNGGGAGAAGAAGGANGTGCTCCTCTCGAGTTTGGAG AAAATTTCCCCCGCAGANGCCTCCGCTTGCTCGCGGAGATGGCGATGACCGTCGAANTGC TCGCTGGACTTGCATTTATGTTCTCNACAAGTATTCTTTTGCAAATACTGGCTTGTGCTC TGTACAATAATTGGTGGCCTATGTTNGCAGCTCTTATGTATGTCCTTGTACCGATGCCAT GCCTATTCTTCGGTGGTGGATCTACCCNGTTCTTGACTAACANAAATGGTGGANGGTGGT TCAATGCTGCNAAATTCCTGACTGGTGCNTCTGCCNTGGGAAGCATTGCAATCCCNCCAA TTCTGANGCACGCTGGCCTAATTGANACTGGAGCCNTGTTCATCNANTTCACGTCCTTCT TCATCCNTGTATGCACNGTGATGTNCTTCCCTANANCTACCCNGGATGAAAATTGGTNAA ANGGCNAAGCCCNTTGACACCAAAAGTTNATCTGTTTCNTGGTTTGCTCCCCCCNCNTTC AAAAAAAAATCCCTNATGGANACTAACCTGGACATGTTTTCCAAAAAACNATATTTNAAT TNGCGTTACTGTCTGTTTTAATGCTCCAAAATTGCTGATCTACCACAATGCCCATGTTCT ATGTTCCTTCCCGTTAATACCCCCCCATGATCTATGGGCCACTGTCCCCCCCCTTTNAAA TNCATCAAACAACAGGCNGGGCCNGT



consensusID : consensus_9912#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 698
fasta sequence
                              [AGAGACTCGCAACGCAGGTCAGAGCGGAAGGGGAGAAGAAGGAGGTGCTCCTCTCGAGTTTGGAGAAAATTTCCCCCGCAGAGGCCTCCGCTTGCTCGCGGAGATGGCGATGACCGTCGAAGTGCTCGCTGGACTTGCATTTATGTTCTCAACAAGTATTCTTTTGCAAATACTGGCTTGTGCTCTGTACAATAATTGGTGGCCTATGTTAGCAGCTCTTATGTATGTCCTTGTACCGATGCCATGCCTATTCTTCGGTGGTGGATCTACCCAGTTCTTGACTAGCAGAGATGGTGGAGGGTGGTTCAATGCTGCAAAATTCCTGACTGGTGCATCTGCCATGGGAAGCATTGCAATCCCAGCAATTCTGAGGCACGCTGGCCTAATTGAGACTGGAGCCATGTTCATCGAGTTCACGTCCTTCTTCATCCTTGTATGCACAGTGATGTGCTTCCATAGAGCTACGCTGGATGAAGATTGGTAAAAGGCTCGAGGCACATGGACACAAGAAGGTAAATCTGTTTCATGGTTTGCTTCTCAGCACGTACAAGAGAAATTCCTTAGTGGACACTAACATGGACATGTGTACAAAGAAGCAAATATTTGAGTTGGCGTGACTGTCCGTATAAATGCTCAAAGATTTGCTGATCTAGCGACAATGCCAATGTTCTATGTGCACTTTCATGTTGAATACCCTC]

[+] EMBL AK062986             [AGAGACTCGCAACGCAGGTCAGAGCGGAAGGGGAGAAGAAGGAGGTGCTCCTCTCGAGTTTGGAGAAAATTTCCCCCGCAGAGGCCTCCGCTTGCTCGCGGAGATGGCGATGACCGTCGAAGTGCTCGCTGGACTTGCATTTATGTTCTCAACAAGTATTCTTTTGCAAATACTGGCTTGTGCTCTGTACAATAATTGGTGGCCTATGTTAGCAGCTCTTATGTATGTCCTTGTACCGATGCCATGCCTATTCTTCGGTGGTGGATCTACCCAGTTCTTGACTAGCAGAGATGGTGGAGGGTGGTTCAATGCTGCAAAATTCCTGACTGGTGCATCTGCCATGGGAAGCATTGCAATCCCAGCAATTCTGAGGCACGCTGGCCTAATTGAGACTGGAGCCATGTTCATCGAGTTCACGTCCTTCTTCATCCTTGTATGCACAGTGATGTGCTTCCATAGAGCTACGCTGGATGAAGATTGGTAAAAGGCTCGAGGCACATGGACACAAGAAGGTAAATCTGTTTCATGGTTTGCTTCTCAGCACGTACAAGAGAAATTCCTTAGTGGACACTAACATGGACATGTGTACAAAGAAGCAAATATTTGAGTTGGCGTGACTGTCCGTATAAATGCTCAAAGATTTGCTGATCTAGCGACAATGCCAATGTTCTATGTGCAC                   ]
[+] EMBL AF074803             [                                             TGCTCCTCTCGAGTTTGGAGAAAATTTCCCCCGCAGAGGCCTCCGCTTGCTCGCGGAGATGGCGATGACCGTCGAAGTGCTCGCTGGACTTGCATTTATGTTCTCAACAAGTATTCTTTTGCAAATACTGGCTTGTGCTCTGTACAATAATTGGTGGCCTATGTTAGCAGCTCTTATGTATGTCCTTGTACCGATGCCATGCCTATTCTTCGGTGGTGGATCTACCCAGTTCTTGACTAGCAAAAATGGTGGAGGGTGGTTCAATGCTGCAAAATTCCTGACTGGTGCATCTGCCATGGGAAGCATTGCAATCCCAGCAATTCTGAGGCACGCTGGCCTAATTGAAACTGGAGCCATGTTCATCGANTTCACGTCCTTCTTCATCCTTGTATGCACAGTGATNTGCTTCCATAAAGCTNCGCTGGATNAANATTGGTAAAAGGCTCGAGGCACNTGGACACAAGAAGGTAAATCTGTTTCATGGTTTGCTTCTCANCACGTTCAANAAAAATTCCTTANTGGACACTAACATGGACATGTTTTCAAAGAAACAAATNTTTGANTTGGCGTGACTGTCTGTATAAATGCTCAAAGATTTGCTGATCTAACGACAATGCCAATGTTCTATGTGCACTTTCATGTTGAATACCCTC]
[+] EMBL AU029879             [                                                                                                                                                                                    TGCTCTGTACAATAATTGGTGGCCTATGTTAGCAGCTCTTATGTATGTCCTTGTACCGATGCCATGCCTATTCTTCGGTGGTGGATCTACCCAGTTCTTGACTAGCAGAGATGGTGGAGGGTGGTTCAATGCTGCAAAATTCCTGACTGGTGCATCTGCCATGGGAAGCATTGCAATCCCAGCAATTCTGAGGCACGCTGGCCTAATTGAGACTGGAGCCATGTTCATCGAGTTCACGTCCTTCTTCATCCTTGTATGCACAGTGATGTNCTTCCATAGAGCTACG TGGATGAAGATTGGT AAAGGCTCGAGGCACATGGACAC AGAAGGT AATCTG TTCATGG                                                                                                                                                                         ]


>consensus_9912#2 AGAGACTCGCAACGCAGGTCAGAGCGGAAGGGGAGAAGAAGGAGGTGCTCCTCTCGAGTT TGGAGAAAATTTCCCCCGCAGAGGCCTCCGCTTGCTCGCGGAGATGGCGATGACCGTCGA AGTGCTCGCTGGACTTGCATTTATGTTCTCAACAAGTATTCTTTTGCAAATACTGGCTTG TGCTCTGTACAATAATTGGTGGCCTATGTTAGCAGCTCTTATGTATGTCCTTGTACCGAT GCCATGCCTATTCTTCGGTGGTGGATCTACCCAGTTCTTGACTAGCAGAGATGGTGGAGG GTGGTTCAATGCTGCAAAATTCCTGACTGGTGCATCTGCCATGGGAAGCATTGCAATCCC AGCAATTCTGAGGCACGCTGGCCTAATTGAGACTGGAGCCATGTTCATCGAGTTCACGTC CTTCTTCATCCTTGTATGCACAGTGATGTGCTTCCATAGAGCTACGCTGGATGAAGATTG GTAAAAGGCTCGAGGCACATGGACACAAGAAGGTAAATCTGTTTCATGGTTTGCTTCTCA GCACGTACAAGAGAAATTCCTTAGTGGACACTAACATGGACATGTGTACAAAGAAGCAAA TATTTGAGTTGGCGTGACTGTCCGTATAAATGCTCAAAGATTTGCTGATCTAGCGACAAT GCCAATGTTCTATGTGCACTTTCATGTTGAATACCCTC



consensusID : consensus_9912#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 676
fasta sequence
                              [AACGCAGGTCAGAGCGGAAGGGGAGAAGAAGGAGGTGCTCCTCTCGACTCGAGTTTGGAGAAAATTCCCCCCGCAGAGGCCTCCGCTTGGCGCTTGCTCGCGGAGATGGCGATGACCGTCGAAGTGCTCGCTGGACTTGCATTTATGTTCTCAACAAGTATTCTTTTGCAAATACTGGCTTGTGCTCTGTACAATAATTGGTGGCCTATGTTAGCAGCTCTTATGTATGTCCTTGTACCGATGCCATGCCTATTCTTCGG-TGGTGGATCTA-CCCAGTTCTTGACTAGCAGAGATGG-TGGAGGGTGGTTC-AATGCTGCAAAATTCCT-GACTGGTGCATCTG-CCATGGG-AAGCATTGCAATCCCAGCAATTCTGAGGCACGCTGGCCTAATTGAGACTGGAG-CCATGTTCATCGAGTTCACGTCCTTCTTCATCCTTGTATGCACAGTGATGTGCTTCCATAGAGCTACACTGGATGAAGATTGGTAAAAGGCTCGAGGCACATGGACACAAGAAGGTAAATCTGTTTCATGGTTTGCTTTCTCAGCACGTACAAGAGAAATNTCC-TAGTGGACGCTAACATGGACATGTGTAC-AAGAAGC-AATATTTGAGTNGGCGTGACTGTCTGTATAAATGCTCAAAGATTTGCTGAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL CA755732             [AACGCAGGTCAGAGCGGAAGGGGAGAAGAAGGAGGTGCTCCTCTCGACTCGAGTTTGGAGAAAATTCCCCCCGCAGAGGCCTCCGCTTGGCGCTTGCTCGCGGAGATGGCGATGACCGTCGAAGTGCTCGCTGGACTTGCATTTATGTTCTCAACAAGTATTCTTTTGCAAATACTGGCTTGTGCTCTGTACAATAATTGGTGGCCTATGTTAGCAGCTCTTATGTATGTCCTTGTACCGATGCCATGCCTATTCTTCGG TGGTGGATCTA CCCAGTTCTTGACTAGCAGAGATGG TGGAGGGTGGTTC AATGCTGCAAAATTCCT GACTGGTGCATCTG CCATGGG AAGCATTGCAATCCCAGCAATTCTGAGGCACGCTGGCCTAATTGAGACTGGAG CCATGTTCATCGAGTTCACGTCCTTCTTCATCCTTGTATGCACAGTGATGTGCTTCCATAGAGCTACACTGGATGAAGATTGGTAAAAGGCTCGAGGCACATGGACACAAGAAGGTAAATCTGTTTCATGGTTTGCTTTCTCAGCACGTACAAGAGAAATNTCC TAGTGGACGCTAACATGGACATGTGTAC AAGAAGC AATATTTGAGTNGGCGTGACTGTC                                                     ]
[+] EMBL AU095005             [                                                                                                                                                                                                                                                  GCCATGCCTATTCTTCGGTTGGTGGATCTACCCCANTTCTTGACTAGCAGAGATGGTTGGAGGTTGGTTCAAATGCTGCAAAATTCCTGGACTGGTGCATCTGCCCATGGGAAAGCATTGCAATCCCAGCAATTCTGAGGCACGCTGGCCTAATTGAGACTGGAGCCCATGTTCATCGAGTTCACGTCCTTCTTCATCCTTGTATGCACAGTGATGTGCTTCCATAGA NTACGCTGGATGAAGATTGGTAAAAGGCTCGAGGCACATGGACACAAGAAGGTAAATCTGTTTCATGGTTTGC TTCTCAGCACGTACAAGAGAAAT TCCTTAGTGGACACTAACATGGACATGTGTACAAAGAAGCAAATATTTGAGTTGGCGTGACTGTCTGTATAAATGCTCAAAGATTTGCTGAAAAAAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_9912#3 AACGCAGGTCAGAGCGGAAGGGGAGAAGAAGGAGGTGCTCCTCTCGACTCGAGTTTGGAG AAAATTCCCCCCGCAGAGGCCTCCGCTTGGCGCTTGCTCGCGGAGATGGCGATGACCGTC GAAGTGCTCGCTGGACTTGCATTTATGTTCTCAACAAGTATTCTTTTGCAAATACTGGCT TGTGCTCTGTACAATAATTGGTGGCCTATGTTAGCAGCTCTTATGTATGTCCTTGTACCG ATGCCATGCCTATTCTTCGGTGGTGGATCTACCCAGTTCTTGACTAGCAGAGATGGTGGA GGGTGGTTCAATGCTGCAAAATTCCTGACTGGTGCATCTGCCATGGGAAGCATTGCAATC CCAGCAATTCTGAGGCACGCTGGCCTAATTGAGACTGGAGCCATGTTCATCGAGTTCACG TCCTTCTTCATCCTTGTATGCACAGTGATGTGCTTCCATAGAGCTACACTGGATGAAGAT TGGTAAAAGGCTCGAGGCACATGGACACAAGAAGGTAAATCTGTTTCATGGTTTGCTTTC TCAGCACGTACAAGAGAAATNTCCTAGTGGACGCTAACATGGACATGTGTACAAGAAGCA ATATTTGAGTNGGCGTGACTGTCTGTATAAATGCTCAAAGATTTGCTGAAAAAAAAAAAA AAAAAAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9912#1      -----AGTCGCT-CGCANGTCAGAGCGGANNGGGAGAAGAAGGANGTGCTCCTCTCGA-- 52
consensus_9912#3      ----------AA-CGCAGGTCAGAGCGGAAGGGGAGAAGAAGGAGGTGCTCCTCTCGACT 49
consensus_9912#0      AAGAGACTCGCAACGCAGGTCAGAGCGGAAGGGGAGAAGAAGGAGGTGCTCCTCTCGA-- 58
consensus_9912#2      -AGAGACTCGCAACGCAGGTCAGAGCGGAAGGGGAGAAGAAGGAGGTGCTCCTCTCGA-- 57
                                   **** ***********  ************* *************  

consensus_9912#1      ---GTTTGGAGAAAATTTCCCCCGCAGANGCCTCCGCT-------TGCTCGCGGAGATGG 102
consensus_9912#3      CGAGTTTGGAGAAAATTCCCCCCGCAGAGGCCTCCGCTTGGCGCTTGCTCGCGGAGATGG 109
consensus_9912#0      ---GTTTGGAGAAAATTTCCCCCGCAGAGGCCTCCGCT-------TGCTCGCGGAGATGG 108
consensus_9912#2      ---GTTTGGAGAAAATTTCCCCCGCAGAGGCCTCCGCT-------TGCTCGCGGAGATGG 107
                         ************** ********** *********       ***************

consensus_9912#1      CGATGACCGTCGAAN--------------------------------------------- 117
consensus_9912#3      CGATGACCGTCGAAG--------------------------------------------- 124
consensus_9912#0      CGATGACCGTCGAAGGTGAGGGTCGCTCTGAGTTTCCCTCCCCCATCTAAGATTTGCTCA 168
consensus_9912#2      CGATGACCGTCGAAG--------------------------------------------- 122
                      **************                                              

consensus_9912#1      ------------------------------------------------------------
consensus_9912#3      ------------------------------------------------------------
consensus_9912#0      ATTGCTAGTCTGGTTCTGTTCCCGATTTCGGCGTCGTTTGGGCTCTCCGATTCGAGTGTC 228
consensus_9912#2      ------------------------------------------------------------
                                                                                  

consensus_9912#1      ------------------------------------------------------------
consensus_9912#3      ------------------------------------------------------------
consensus_9912#0      GGGGTGGCGGGGGATTGGGCGGCTAGGGTTCCGGTTCGAGTTTGGTGTTACGATTGGCTG 288
consensus_9912#2      ------------------------------------------------------------
                                                                                  

consensus_9912#1      TGCTCGCTGGACTTGCATTTATGTTCTCNACAAGTATTCTTTTGCAAATACTGGCTTGTG 177
consensus_9912#3      TGCTCGCTGGACTTGCATTTATGTTCTCAACAAGTATTCTTTTGCAAATACTGGCTTGTG 184
consensus_9912#0      TGCTCGCTGGACTTGCATTTATGTTCTCAACAAGTATTCTTTTGCAAATACTGGCTTGTG 348
consensus_9912#2      TGCTCGCTGGACTTGCATTTATGTTCTCAACAAGTATTCTTTTGCAAATACTGGCTTGTG 182
                      **************************** *******************************

consensus_9912#1      CTCTGTACAATAATTGGTGGCCTATGTTNGCAGCTCTTATGTATGTCCTTGTACCGATGC 237
consensus_9912#3      CTCTGTACAATAATTGGTGGCCTATGTTAGCAGCTCTTATGTATGTCCTTGTACCGATGC 244
consensus_9912#0      CTCTGTACAATAATTGGTGGCCTATGTTAGCAGCTCTTATGTATGTCCTTGTACCGATGC 408
consensus_9912#2      CTCTGTACAATAATTGGTGGCCTATGTTAGCAGCTCTTATGTATGTCCTTGTACCGATGC 242
                      **************************** *******************************

consensus_9912#1      CATGCCTATTCTTCGGTGGTGGATCTACCCNGTTCTTGACTAACANAAATGGTGGANGGT 297
consensus_9912#3      CATGCCTATTCTTCGGTGGTGGATCTACCCAGTTCTTGACTAGCAGAGATGGTGGAGGGT 304
consensus_9912#0      CATGCCTATTCTTCGGTGGTGGATCTACCCAGTTCTTTACTAGCAGAGATGGTGGAGGGT 468
consensus_9912#2      CATGCCTATTCTTCGGTGGTGGATCTACCCAGTTCTTGACTAGCAGAGATGGTGGAGGGT 302
                      ****************************** ****** **** ** * ******** ***

consensus_9912#1      GGTTCAATGCTGCNAAATTCCTGACTGGTGCNTCTGCCNTGGGAAGCATTGCAATCCCNC 357
consensus_9912#3      GGTTCAATGCTGCAAAATTCCTGACTGGTGCATCTGCCATGGGAAGCATTGCAATCCCAG 364
consensus_9912#0      GGTTCAATGCTGCAAAATTCCTGACTGGTGCATCTGCCATGGGAAGCATTGCAATCCCAG 528
consensus_9912#2      GGTTCAATGCTGCAAAATTCCTGACTGGTGCATCTGCCATGGGAAGCATTGCAATCCCAG 362
                      ************* ***************** ****** *******************  

consensus_9912#1      CAATTCTGANGCACGCTGGCCTAATTGANACTGGAGCCNTGTTCATCNANTTCACGTCCT 417
consensus_9912#3      CAATTCTGAGGCACGCTGGCCTAATTGAGACTGGAGCCATGTTCATCGAGTTCACGTCCT 424
consensus_9912#0      CAATTCTGAGGCACGCTGGCCTAATTGAGACTGGAGCCATGTTCATCGAGTTCACGTCCT 588
consensus_9912#2      CAATTCTGAGGCACGCTGGCCTAATTGAGACTGGAGCCATGTTCATCGAGTTCACGTCCT 422
                      ********* ****************** ********* ******** * **********

consensus_9912#1      TCTTCATCCNTGTATGCACNGTGATGTNCTTCCCTANANCTACCCNGGATGAAAATTGGT 477
consensus_9912#3      TCTTCATCCTTGTATGCACAGTGATGTGCTTCCATAGAGCTACACTGGATGAAGATTGGT 484
consensus_9912#0      TCTTCATCCTTGTATGCACAGTGATGTGCTTCCATAGAGCTACGCTGGATGAAGATTGGT 648
consensus_9912#2      TCTTCATCCTTGTATGCACAGTGATGTGCTTCCATAGAGCTACGCTGGATGAAGATTGGT 482
                      ********* ********* ******* ***** ** * **** * ******* ******

consensus_9912#1      NAAANGG-CNAAGCCCNTTGACACCAAAAGTTNA-TCTGTTTCNTGGTTTGCTCCCCC-- 533
consensus_9912#3      AAAAGGCTCGAGGCACATGGACACAAGAAGGTAAATCTGTTTCATGGTTTGCTTTCTCAG 544
consensus_9912#0      AAAAGGCTCGAGGCACATGGACACAAGAAGGTAAATCTGTTTCATGGTTTGCTTCTCA-G 707
consensus_9912#2      AAAAGGCTCGAGGCACATGGACACAAGAAGGTAAATCTGTTTCATGGTTTGCTTCTCA-G 541
                       *** *  * * ** * * ***** * *** * * ******** *********       

consensus_9912#1      CNCNTTCAAAAAAAAATCCCTNATGGANACTAACCTGGACATGTTTTCCAAAAAACNA-T 592
consensus_9912#3      CACGTACAAGAGAAATNTCCTAGTGGACGCTAACATGGACATGTGTAC-AAGAAGCAA-T 602
consensus_9912#0      CACGTACAAGAGAAATTCCTTAGTGGACACTAACATGGACATGTGTACAAAGAAGCAAAT 767
consensus_9912#2      CACGTACAAGAGAAATTCCTTAGTGGACACTAACATGGACATGTGTACAAAGAAGCAAAT 601
                      * * * *** * ***   * *  ****  ***** ********* * * ** ** * * *

consensus_9912#1      ATTTNAATTNGCGTTACTGTCTGTTTTAATGCTCCAAAATT-GCTGATCTACC-ACAATG 650
consensus_9912#3      ATTTGAGTNGGCGTGACTGTCTGTATAAATGCTCAAAGATTTGCTGAAAAAAA-AAAAAA 661
consensus_9912#0      ATTTGAGTTGGCGTGACTGTCTGTATAAATGCTCAAAGATTTGCTGATCTAGCGACAATG 827
consensus_9912#2      ATTTGAGTTGGCGTGACTGTCCGTATAAATGCTCAAAGATTTGCTGATCTAGCGACAATG 661
                      **** * *  **** ****** ** * ******* ** *** *****   *   * **  

consensus_9912#1      CCCATGTTCTATGTTC---CTTCCCGTTAATACCCCCC-CATGATCTATGGGCCACTGTC 706
consensus_9912#3      AAAAAAAAAAAAAAA--------------------------------------------- 676
consensus_9912#0      CCAATGTTCTATGTGCACTTTTCATGTGAATACTCCTCACATGATCTATGGGCAACCTGT 887
consensus_9912#2      CCAATGTTCTATGTGCACTTTCATGTTGAATACCCTC----------------------- 698
                         *      *                                                 

consensus_9912#1      CCCCCCCTTTNAAATNCATCAAACAACAGGCNGGGCCNGT 746
consensus_9912#3      ----------------------------------------
consensus_9912#0      CAGC------------------------------------ 891
consensus_9912#2      ----------------------------------------
                                                              




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)