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Oryza sativa
cluster # 9923 cluster # 9923       Sequences # 7       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9923#0 length = 1863 sequences # 6  
consensus_9923#1 length = 649 sequences # 1  

consensusID : consensus_9923#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1863
fasta sequence
                              [GCCACCAATGATTTGCAGTAGTAACAGATATAGGTCTTAGGCCTCCCTGAGAGGCTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATTTGGTGTTGGATAGGAGAAGAGAGTGGAGACAGTGGGGGTGAGAGGATTGGAAGCATCCAGATTCTGAATCTCCTGCAAGCCTACTTCCTGTTATCTTCTTTGGGCTTTCAGCAAGCATCCATTGTGATGCACTGGCCAGTGGATGATAAAGCCATCAATCAACTGAACCAGCATGAGCTCCCAGAGTGTTGTTGCAGTGAAGCAGATTACTGCTCCGGACAAAATAGTGGAAACCTGTCCATCCACAAAACATTCTGCACATAAGCTGTTCGATGTTAAACCGGATTTTCAAGGGTTGATAGATGACAATTTGTCATCCTCCAGTCAGTCCTCAAGCATCAAGATTGAGCTGATCAGATCATCAAGCTTGCCAAATATACTGCCGTTTCAGAAAAGAAGCTCTGAACCTGAACCTGAAAGTCCACTGTCTCATGTTTCACATCCCAATGTTTCAGAGCCAGTTTACTCAAATTCTTCAACCTTCTGCACAAGTTTGTTTTCGTCGTCGTCGATGGAGACGGAGCCGTGCCGGCAATTGGGCACTCTACCATTCCTGCCTCACCCTCCTAAGTGTGAGCAGCAGGTTTCAGCAGGGCACTCATCAAGCTCCTCCCTGCTAGTACCTGGTGGTGATGGTGATATTGGCAATGCTCATGATGAACCTGAACAGTCAGATGATCTGAAGGATTTCCTCAATCTCTCTGGAGGAGATGCTTCTGATGGCAGCTTCCATGGAGAAAACAATGCCATGGCTTTTGCTGAGCAGATGGAGTTCCAGTTCTTGTCTGAGCAGCTAGGGATTGCCATCACTGACAATGAGGAGAGCCCTCGGTTAGATGACATATACGGCACGCCGCCGCAACTTTCATCACTTCCAGTATCATCTTGCTCCAACCAGAGTGTACAGAAAGCAGGATCTCCTGTGAAAGTTCAGCTTAGCTCGCCTCGGTCATCTTCGGGATCCGCGACAACTAACAAGGCGAGGTTGAGGTGGACACTGGAGCTCCATGAGCGTTTTGTAGAGGCTGTGAACAAGCTAGATGGACCTGAAAAGGCAACTCCTAAAGGTGTGCTGAAACTTATGAAAGTAGAAGGCCTGACTATCTACCATGTAAAGAGTCATTTGCAGAAGTATCGCCTCGCAAAATATCTCCCAGAGACTAAGGAAGACAAGAAGGCATCCTCAGAGGATAAGAAATCTCAGTCAGGTAGCAGTGGAAATGATTCAGTCAAAAAGAAGAACTTACAAGTGGCAGAAGCTCTACGAATGCAAATGGAGGTTCAGAAACAGCTTCATGAACAGTTAGAGGTGCAAAGGCAACTGCAGCTGCGAATCGAAGAACACGCAAGATACCTGCAGAGAATACTGGAAGAGCAGCACAAGGTCAGCATCAGCAGCAACTCCCTCTCACTGAAACCCCCAGCCGAATCGCAACCGGAATCGCCAAAACCAACATCAGAAAAGAAGGAGGCCGAATCCGAAGCAGGCGCCGCCACTTCAGCTCAGCCATCATCCGAGGATAAATCACCAGACGCAGAATGCAAGTCGTCGCCGCCGGTGGGTAGCAAGAGAGCTAGGGTTCATGTCGGCGATGAGCACCAGTGTTCATAGCTTGTGTAGAGAGGAAGAAGGCAAGGATTTCTCAGCTGCATGCAAATGCATCTCTCTTCTTGAGAATTTTAGCCACTGTATATAAATTTGGACTTTTGGGGAATGAGAATCTGAATTTGGAAGCAGATAAATAATAATCAAAAATCAAAAAAAAGGA]

[+] EMBL AK067950             [GCCACCAATGATTTGCAGTAGTAACAGATATAGGTCTTAGGCCTCCCTGAGAGGCTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATTTGGTGTTGGATAGGAGAAGAGAGTGGAGACAGTGGGGGTGAGAGGATTGGATGCATCCAGATTCTGAATCTCCTGCAAGCCTACTTCCTGTTATCTTCTTTGGGCTTTCAGCAAGCATCCATTGTGATGCACTGGCCAGTGGATGATAAAGCCATCAATCAACTGAACCAGCATGAGCTCCCAGAGTGTTGTTGCAGTGAAGCAGATTACTGCTCCGGACAAAATAGTGGAAACCTGTCCATCCACAAAACATTCTGCACATAAGCTGTTCGATGTTAAACCGGATTTTCAAGGGTTGATAGATGACAATTTGTCATCCTCCAGTCAGTCCTCAAGCATCAAGATTGAGCTGATCAGATCATCAAGCTTGCCAAATATACTGCCGTTTCAGAAAAGAAGCTCTGAACCTGAACCTGAAAGTCCACTGTCTCATGTTTCACATCCCAATGTTTCAGAGCCAGTTTACTCAAATTCTTCAACCTTCTGCACAAGTTTGTTTTCGTCGTCGTCGATGGAGACGGAGCCGTGCCGGCAATTGGGCACTCTACCATTCCTGCCTCACCCTCCTAAGTGTGAGCAGCAGGTTTCAGCAGGGCACTCATCAAGCTCCTCCCTGCTAGTACCTGGTGGTGATGGTGATATTGGCAATGCTCATGATGAACCTGAACAGTCAGATGATCTGAAGGATTTCCTCAATCTCTCTGGAGGAGATGCTTCTGATGGCAGCTTCCATGGAGAAAACAATGCCATGGCTTTTGCTGAGCAGATGGAGTTCCAGTTCTTGTCTGAGCAGCTAGGGATTGCCATCACTGACAATGAGGAGAGCCCTCGGTTAGATGACATATACGGCACGCCGCCGCAACTTTCATCACTTCCAGTATCATCTTGCTCCAACCAGAGTGTACAGAAAGCAGGATCTCCTGTGAAAGTTCAGCTTAGCTCGCCTCGGTCATCTTCGGGATCCGCGACAACTAACAAGGCGAGGTTGAGGTGGACACTGGAGCTCCATGAGCGTTTTGTAGAGGCTGTGAACAAGCTAGATGGACCTGAAAAGGCAACTCCTAAAGGTGTGCTGAAACTTATGAAAGTAGAAGGCCTGACTATCTACCATGTAAAGAGTCATTTGCAGAAGTATCGCCTCGCAAAATATCTCCCAGAGACTAAGGAAGACAAGAAGGCATCCTCAGAGGATAAGAAATCTCAGTCAGGTAGCAGTGGAAATGATTCAGTCAAAAAGAAGAACTTACAAGTGGCAGAAGCTCTACGAATGCAAATGGAGGTTCAGAAACAGCTTCATGAACAGTTAGAGGTGCAAAGGCAACTGCAGCTGCGAATCGAAGAACACGCAAGATACCTGCAGAGAATACTGGAAGAGCAGCACAAGGTCAGCATCAGCAGCAACTCCCTCTCACTGAAACCCCCAGCCGAATCGCAACCGGAATCGCCAAAACCAACATCAGAAAAGAAGGAGGCCGAATCCGAAGCAGGCGCCGCCACTTCAGCTCAGCCATCATCCGAGGATAAATCACCAGACGCAGAATGCAAGTCGTCGCCGCCGGTGGGTAGCAAGAGAGCTAGGGTTCATGTCGGCGATGAGCACCAGTGTTCATAGCTTGTGTAGAGAGGAAGAAGGCAAGGATTTCTCAGCTGCATGCAAATGCATCTCTCTTCTTGAGAATTTTAGCCACTGTATATAAATTTGGACTTTTGGGGAATGAGAATCTGA                                           ]
[+] EMBL AK060648             [                                                                           AGAGAGAGAGAGAGAGATTTGGTGTTGGATAGGAGAAGAGAGTGGAGACAGTGGGGGTGAGAGGATTGGAAGCATCCAGATTCTGAATCTCCTGCAAGCCTACTTCCTGTTATCTTCTTTGGGCTTTCAGCAAGCATCCATTGTGATGCACTGGTCAGTGGATGATAAAGCCATCAATCAACTGAACCAGCATGAGCTCCCAGAGTGTTGTTGCAGTGAAGCAGATTACTGCTCCGGACAAAATAGTGGAAACCTGTCCATCCACAAAACATTCTGCACATAAGCTGTTCGATGTTAAACCGGATTTTCAAGGGTTGATAGATGACAATTTGTCATCCTCCAGTCAGTCCTCAAGCATCAAGATTGAGCTGATCAGATCATCAAGCTTGCCAAATATACTGCCGTTTCAGAAAAGAAGCTCTGAACCTGAACCTGAAAGTCCACTGTCTCATGTTTCACATCCCAATGTTTCAGAGCCAGTTTACTCAAATTCTTCAACCTTCTGCACAAGTTTGTTTTCGTCGTCGTCGATGGAGACGGAGCCGTGCCGGCAATTGGGCACTCTACCATTCCTGCCTCACCCTCCTAAGTGTGAGCAGCAGGTTTCAGCAGGGCACTCATCAAGCTCCTCCCTGCTAGTACCTGGTGGTGATGGTGATATTGGCAATGCTCATGATGAACCTGAACAGTCAGATGATCTGAAGGATTTCCTCAATCTCTCTGGAGGAGATGCTTCTGATGGCAGCTTCCATGGAGAAAACAATGCCATGGCTTTTGCTGAGCAGATGGAGTTCCAGTTCTTGTCTGAGCAGCTAGGGATTGCCATCACTGACAATGAGGAGAGCCCTCGGTTAGATGACATATACGGCACGCCGCCGCAACTTTCATCACTTCCAGTATCATCTTGCTCCAACCAGAGTGTACAGAAAGCAGGATCTCCTGTGAAAGTTCAGCTTAGCTCGCCTCGGTCATCTTCGGGATCCGCGACAACTAACAAGGCGAGGTTGAGGTGGACACTGGAGCTCCATGAGCGTTTTGTAGAGGCTGTGAACAAGCTAGATGGACCTGAAAAGGCAACTCCTAAAGGTGTGCTGAAACTTATGAAAGTAGAAGGCCTGACTATCTACCATGTAAAGAGTCATTTGCAGAAGTATCGCCTCGCAAAATATCTCCCAGAGACTAAGGAAGACAAGAAGGCATCCTCAGAGGATAAGAAATCTCAGTCAGGTAGCAGTGGAAATGATTCAGTCAAAAAGAAGAACTTACAAGTGGCAGAAGCTCTACGAATGCAAATGGAGGTTCAGAAACAGCTTCATGAACAGTTAGAGGTGCAAAGGCAACTGCAGCTGCGAATCGAAGAACACGCAAGATACCTGCAGAGAATACTGGAAGAGCAGCACAAGGTCAGCATCAGCAGCAACTCCCTCTCACTGAAACCCCCAGCCGAATCGCAACCGGAATCGCCAAAACCAACATCAGAAAAGAAGGAGGCCGAATCCGAAGCAGGCGCCGCCACTTCAGCTCAGCCATCATCCGAGGATAAATCACCAGACGCAGAATGCAAGTCGTCGCCGCCGGTGGGTAGCAAGAGAGCTAGGGTTCATGTCGGCGATGAGCACCAGTGTTCATAGCTTGTGTAGAGAGGAAGAAGGCAAGGATTTCTCAGCTGCATGCAAATGCATCTCTCTTCTTGAGAATTTTAGCCACTGTATATAAATTTGGACTTTTGGGGAATGAGAATCTGA                                           ]
[+] EMBL CB618990             [                                                                                         AGATTTGGTGTTGGATAGGAGAAGAGAGTGGAGACAGTGGGGGTGAGAGGATTGGAAGCATCCAGATTCTGAATCTCCTGCAAGCCTACTTCCTGTTATCTTCTTTGGGCTTTCAGCAAGCATCCATTGTGATGCACTGGCCAGTGGATGATAAAGCCATCAATCAACTGAACCAGCATGAGCTCCCAGAGTGTTGTTGCAGTGAAGCAGATTACTGCTCCGGACAAAATAGTGGAAACCTGTCCATCCACAAAACATTCTGCACATAAGCTGTTCGATGTTAAACCGGATTTTCAAGGGTTGATAGATGACAATTTGTCATCCTCCAGTCAGTCCTCAAGCATCAAGATTGAGCTGATCAGATCATCAAGCTTGCCAAATATACTGCCGTTTCAGAAAAGAAGCTCTGAACCTGAACCTGAAAGTCCACTGTCTCATGTTTCACATCCCAATGTTTCAGAGCCAGTTTACTCAAATTCTTCAACCTTCTGCGCAAGTTTGTTTTCGTCGTCGTCGATGGAGACGGAGCCGTGCCGGCAATTGGGCACTCTACCATTCCTGCCTCACCCTCCTAAGTGTGAGCAGCAGGTTTCAGCAGGGCACTCATCAAGCTCCTCCCTGCTAGTACCTGGTGGTGATGGTGATATTGGCAATGCTCATGATGAACCTGAACAGTCAGATGATCTGAAGGATTTCCTCAATCTCTCTGGAGGAGATGCTTCTGATGGCAGCTTCCATGGAGAAAACAATGCCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL OSS4023A             [                                                                                               GGTGTTGGATAGGAGAAGAGAGTGGAGACAGTGGGGGTGAGAGGATTGGAAGCATCCAGATTCTGAATCTCCTGCAAGCCTACTTCCTGTTATCTTCTTTGGGCTTTCAGCAAGCATCCATTGTGATGCACTGGCCAGTGGATGATAAAGCCATCAATCAACTGAACCAGCATGAGCTCCCAGAGTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL CB618991             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          CTAGATGGACCTGAAAAGGCAACTCCTAAAGGTGTGCTGAAACTTATGAAAGTAGAAGGCCTGACTATCTACCATGTAAAGAGTCATTTGCAGAAGTATCGCCTCGCAAAATATCTCCCAGAGACTAAGGAAGACAAGAAGGCATCCTCAGAGGATAAGAAATCTCAGTCAGGTAGCAGTGGAAATGATTCAGTCAAAAAGAAGAACTTACAAGTGGCAGAAGCTCTACGAATGCAAATGGAGGTTCAGAAGCAGCTTCATGAACAGTTAGAGGTGCAAAGGCAACTGCAGCTGCGAATCGAAGAACACGCAAGATACCTGCAGAGAATACTGGAAGAGCAGCACAAGGTCAGCATCAGCAGCAACTCCCTCTCACTGAAACCCCCAGCCGAATCGCAACCGGAATCGCCAAAACCAACATCAGAAAAGAAGGAGGCCGAATCCGAAGCAGGCGCCGCCACTTCAGCTCAGCCATCATCCGAGGATAAATCACCAGACGCAGAATGCAAGTCGTCGCCGCCGGTGGGTAGCAAGAGAGCTAGGGTTCATGTCGGCGATGAGCACCAGTGTTCATAGCTTGTGTAAAGAGGAAGAAGGCAAGGATTTCTCAGCTGCATGCAAATGCATCTCTCTTCTTGAGAATTTTAGCCACTGTATATAAATTTGGACTTTTGGGGAATGAGAATCTGAATTTGGAAGCAGATAAATAATAATCAAAAATCAAAAAAAAGGA]
[+] EMBL AU174310             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ACCAACATCAGAAAANAAGGAGGCCGNATCCGAAGCAGGCGCCGCCACTTCAGNTCAGCCATCATCCGAGGATAAATCNCCAGACGCAGAATGCAAGTCGTCGCCGCCGGTGGGTAGCNAGAGAGCTAGGGTTCATGTCGGCGATGAGCACCAGTGTTCATAGCTTGTGTAGAGAGGAAGAAGGCAAGGATTTNTCAGCTGCATGCAAATGCATCTCTCTTNTTGAGAATTTTAGCCCCTGTATATAAATTTGGACTTTTGGGGAATGAGAATNTGAATTTGGAAGCAGATAAATTATAATCNAAAAAAAAAAAAAAaa ]


>consensus_9923#0 GCCACCAATGATTTGCAGTAGTAACAGATATAGGTCTTAGGCCTCCCTGAGAGGCTGAGA GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATTTGGTGTTGGATAGGAGAAGAGAGTGG AGACAGTGGGGGTGAGAGGATTGGAAGCATCCAGATTCTGAATCTCCTGCAAGCCTACTT CCTGTTATCTTCTTTGGGCTTTCAGCAAGCATCCATTGTGATGCACTGGCCAGTGGATGA TAAAGCCATCAATCAACTGAACCAGCATGAGCTCCCAGAGTGTTGTTGCAGTGAAGCAGA TTACTGCTCCGGACAAAATAGTGGAAACCTGTCCATCCACAAAACATTCTGCACATAAGC TGTTCGATGTTAAACCGGATTTTCAAGGGTTGATAGATGACAATTTGTCATCCTCCAGTC AGTCCTCAAGCATCAAGATTGAGCTGATCAGATCATCAAGCTTGCCAAATATACTGCCGT TTCAGAAAAGAAGCTCTGAACCTGAACCTGAAAGTCCACTGTCTCATGTTTCACATCCCA ATGTTTCAGAGCCAGTTTACTCAAATTCTTCAACCTTCTGCACAAGTTTGTTTTCGTCGT CGTCGATGGAGACGGAGCCGTGCCGGCAATTGGGCACTCTACCATTCCTGCCTCACCCTC CTAAGTGTGAGCAGCAGGTTTCAGCAGGGCACTCATCAAGCTCCTCCCTGCTAGTACCTG GTGGTGATGGTGATATTGGCAATGCTCATGATGAACCTGAACAGTCAGATGATCTGAAGG ATTTCCTCAATCTCTCTGGAGGAGATGCTTCTGATGGCAGCTTCCATGGAGAAAACAATG CCATGGCTTTTGCTGAGCAGATGGAGTTCCAGTTCTTGTCTGAGCAGCTAGGGATTGCCA TCACTGACAATGAGGAGAGCCCTCGGTTAGATGACATATACGGCACGCCGCCGCAACTTT CATCACTTCCAGTATCATCTTGCTCCAACCAGAGTGTACAGAAAGCAGGATCTCCTGTGA AAGTTCAGCTTAGCTCGCCTCGGTCATCTTCGGGATCCGCGACAACTAACAAGGCGAGGT TGAGGTGGACACTGGAGCTCCATGAGCGTTTTGTAGAGGCTGTGAACAAGCTAGATGGAC CTGAAAAGGCAACTCCTAAAGGTGTGCTGAAACTTATGAAAGTAGAAGGCCTGACTATCT ACCATGTAAAGAGTCATTTGCAGAAGTATCGCCTCGCAAAATATCTCCCAGAGACTAAGG AAGACAAGAAGGCATCCTCAGAGGATAAGAAATCTCAGTCAGGTAGCAGTGGAAATGATT CAGTCAAAAAGAAGAACTTACAAGTGGCAGAAGCTCTACGAATGCAAATGGAGGTTCAGA AACAGCTTCATGAACAGTTAGAGGTGCAAAGGCAACTGCAGCTGCGAATCGAAGAACACG CAAGATACCTGCAGAGAATACTGGAAGAGCAGCACAAGGTCAGCATCAGCAGCAACTCCC TCTCACTGAAACCCCCAGCCGAATCGCAACCGGAATCGCCAAAACCAACATCAGAAAAGA AGGAGGCCGAATCCGAAGCAGGCGCCGCCACTTCAGCTCAGCCATCATCCGAGGATAAAT CACCAGACGCAGAATGCAAGTCGTCGCCGCCGGTGGGTAGCAAGAGAGCTAGGGTTCATG TCGGCGATGAGCACCAGTGTTCATAGCTTGTGTAGAGAGGAAGAAGGCAAGGATTTCTCA GCTGCATGCAAATGCATCTCTCTTCTTGAGAATTTTAGCCACTGTATATAAATTTGGACT TTTGGGGAATGAGAATCTGAATTTGGAAGCAGATAAATAATAATCAAAAATCAAAAAAAA GGA



consensusID : consensus_9923#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 649
fasta sequence
                              [CCGCGCGTGTTACCGATGTAAAGCTCCGTCTGCGGAAGTNTGCGCCCGCACACATTCCCCCCCGAGGCTAAGGAAGCGCGCGAGGGATCCTCCCGCCATAAGAAATCCCAGTCAGCTACCAGGCCTAATCATTCAGTGAAAAACAAGCCCTTCCAAGTGTCACAGGCTCTCGGAATCCAAATGCAGGTTCACAACCAGCTTCATCCCCAGTCACAGGTCCAAAGCCACCTCCACCTCCTAATCGAAGACCCCGCAAGATCCCTCCAGACAATCCTGCAAGAGCAGCTCAAGGTCAGCATCAGCAGCAACTCCCTCTCACTGAAACCCCCAGCCGAATCGCAACCGGAATCGCCAAAACCAACATCAGAAAAGAAGGAGGCCGAATCCGAAGCAGGCGCCGCCACTTCAGCTCAGCCATCATCCGAGGATAAATCACCAGACGCAGAATGCAAGTCGTCGCCGCCGGTGGGTAGCAAGAGAGCTAGGGTTCATGTCGGCGATGAGCACCAGTGTTCATAGCTTGTGTAAAGAGGAAGAAGGCAAGGATTTCTCAGCTGCATGCAAATGCATCTCTCTTCTTGAGAATTTTAGCCACTGTATATAAATTTGGACTTTTGGGGAATGAGAATCTGAATTTGGAAGCAGATAA]

[-] EMBL CA763261             [CCGCGCGTGTTACCGATGTAAAGCTCCGTCTGCGGAAGTNTGCGCCCGCACACATTCCCCCCCGAGGCTAAGGAAGCGCGCGAGGGATCCTCCCGCCATAAGAAATCCCAGTCAGCTACCAGGCCTAATCATTCAGTGAAAAACAAGCCCTTCCAAGTGTCACAGGCTCTCGGAATCCAAATGCAGGTTCACAACCAGCTTCATCCCCAGTCACAGGTCCAAAGCCACCTCCACCTCCTAATCGAAGACCCCGCAAGATCCCTCCAGACAATCCTGCAAGAGCAGCTCAAGGTCAGCATCAGCAGCAACTCCCTCTCACTGAAACCCCCAGCCGAATCGCAACCGGAATCGCCAAAACCAACATCAGAAAAGAAGGAGGCCGAATCCGAAGCAGGCGCCGCCACTTCAGCTCAGCCATCATCCGAGGATAAATCACCAGACGCAGAATGCAAGTCGTCGCCGCCGGTGGGTAGCAAGAGAGCTAGGGTTCATGTCGGCGATGAGCACCAGTGTTCATAGCTTGTGTAAAGAGGAAGAAGGCAAGGATTTCTCAGCTGCATGCAAATGCATCTCTCTTCTTGAGAATTTTAGCCACTGTATATAAATTTGGACTTTTGGGGAATGAGAATCTGAATTTGGAAGCAGATAA]


>consensus_9923#1 CCGCGCGTGTTACCGATGTAAAGCTCCGTCTGCGGAAGTNTGCGCCCGCACACATTCCCC CCCGAGGCTAAGGAAGCGCGCGAGGGATCCTCCCGCCATAAGAAATCCCAGTCAGCTACC AGGCCTAATCATTCAGTGAAAAACAAGCCCTTCCAAGTGTCACAGGCTCTCGGAATCCAA ATGCAGGTTCACAACCAGCTTCATCCCCAGTCACAGGTCCAAAGCCACCTCCACCTCCTA ATCGAAGACCCCGCAAGATCCCTCCAGACAATCCTGCAAGAGCAGCTCAAGGTCAGCATC AGCAGCAACTCCCTCTCACTGAAACCCCCAGCCGAATCGCAACCGGAATCGCCAAAACCA ACATCAGAAAAGAAGGAGGCCGAATCCGAAGCAGGCGCCGCCACTTCAGCTCAGCCATCA TCCGAGGATAAATCACCAGACGCAGAATGCAAGTCGTCGCCGCCGGTGGGTAGCAAGAGA GCTAGGGTTCATGTCGGCGATGAGCACCAGTGTTCATAGCTTGTGTAAAGAGGAAGAAGG CAAGGATTTCTCAGCTGCATGCAAATGCATCTCTCTTCTTGAGAATTTTAGCCACTGTAT ATAAATTTGGACTTTTGGGGAATGAGAATCTGAATTTGGAAGCAGATAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9923#0      GCCACCAATGATTTGCAGTAGTAACAGATATAGGTCTTAGGCCTCCCTGAGAGGCTGAGA 60
consensus_9923#1      ------------------------------------------------------------
                                                                                  

consensus_9923#0      GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATTTGGTGTTGGATAGGAGAAGAGAGTGG 120
consensus_9923#1      ------------------------------------------------------------
                                                                                  

consensus_9923#0      AGACAGTGGGGGTGAGAGGATTGGAAGCATCCAGATTCTGAATCTCCTGCAAGCCTACTT 180
consensus_9923#1      ------------------------------------------------------------
                                                                                  

consensus_9923#0      CCTGTTATCTTCTTTGGGCTTTCAGCAAGCATCCATTGTGATGCACTGGCCAGTGGATGA 240
consensus_9923#1      ------------------------------------------------------------
                                                                                  

consensus_9923#0      TAAAGCCATCAATCAACTGAACCAGCATGAGCTCCCAGAGTGTTGTTGCAGTGAAGCAGA 300
consensus_9923#1      ------------------------------------------------------------
                                                                                  

consensus_9923#0      TTACTGCTCCGGACAAAATAGTGGAAACCTGTCCATCCACAAAACATTCTGCACATAAGC 360
consensus_9923#1      ------------------------------------------------------------
                                                                                  

consensus_9923#0      TGTTCGATGTTAAACCGGATTTTCAAGGGTTGATAGATGACAATTTGTCATCCTCCAGTC 420
consensus_9923#1      ------------------------------------------------------------
                                                                                  

consensus_9923#0      AGTCCTCAAGCATCAAGATTGAGCTGATCAGATCATCAAGCTTGCCAAATATACTGCCGT 480
consensus_9923#1      ------------------------------------------------------------
                                                                                  

consensus_9923#0      TTCAGAAAAGAAGCTCTGAACCTGAACCTGAAAGTCCACTGTCTCATGTTTCACATCCCA 540
consensus_9923#1      ------------------------------------------------------------
                                                                                  

consensus_9923#0      ATGTTTCAGAGCCAGTTTACTCAAATTCTTCAACCTTCTGCACAAGTTTGTTTTCGTCGT 600
consensus_9923#1      ------------------------------------------------------------
                                                                                  

consensus_9923#0      CGTCGATGGAGACGGAGCCGTGCCGGCAATTGGGCACTCTACCATTCCTGCCTCACCCTC 660
consensus_9923#1      ------------------------------------------------------------
                                                                                  

consensus_9923#0      CTAAGTGTGAGCAGCAGGTTTCAGCAGGGCACTCATCAAGCTCCTCCCTGCTAGTACCTG 720
consensus_9923#1      ------------------------------------------------------------
                                                                                  

consensus_9923#0      GTGGTGATGGTGATATTGGCAATGCTCATGATGAACCTGAACAGTCAGATGATCTGAAGG 780
consensus_9923#1      ------------------------------------------------------------
                                                                                  

consensus_9923#0      ATTTCCTCAATCTCTCTGGAGGAGATGCTTCTGATGGCAGCTTCCATGGAGAAAACAATG 840
consensus_9923#1      ------------------------------------------------------------
                                                                                  

consensus_9923#0      CCATGGCTTTTGCTGAGCAGATGGAGTTCCAGTTCTTGTCTGAGCAGCTAGGGATTGCCA 900
consensus_9923#1      ------------------------------------------------------------
                                                                                  

consensus_9923#0      TCACTGACAATGAGGAGAGCCCTCGGTTAGATGACATATACGGCACGCCGCCGCAACTTT 960
consensus_9923#1      ------------------------------------------------------------
                                                                                  

consensus_9923#0      CATCACTTCCAGTATCATCTTGCTCCAACCAGAGTGTACAGAAAGCAGGATCTCCTGTGA 1020
consensus_9923#1      ------------------------------------------------------------
                                                                                  

consensus_9923#0      AAGTTCAGCTTAGCTCGCCTCGGTCATCTTCGGGATCCGCGACAACTAACAAGGCGAGGT 1080
consensus_9923#1      ------------------------------------------------------------
                                                                                  

consensus_9923#0      TGAGGTGGACACTGGAGCTCCATGAGCGTTTTGTAGAGGCTGTGAACAAGCTAGATGGAC 1140
consensus_9923#1      ------------------------------------------------------------
                                                                                  

consensus_9923#0      CTGAAAAGGCAACTCCTAAAGGTGTGCTGAAACTTATGAAAGTAGAAGGCCTGACTATCT 1200
consensus_9923#1      ------------------------------------------------CCGCGCGTGTTA 12
                                                                       *  *  * *  

consensus_9923#0      ACCATGTAAAGAGTCATTTGCAGAAGTATCGCCTCGCAAA-ATATCTCCCAGAGACTAAG 1259
consensus_9923#1      CCGATGTAAAGCTCCGTCTGCGGAAGTNTGCGCCCGCACACATTCCCCCCCGAGGCTAAG 72
                       * ********   * * *** ***** *   * **** * **  * *** *** *****

consensus_9923#0      GAAGACAAGAAGGCATCCTCAGAGGATAAGAAATCTCAGTCAGGTAGCAGTGGAAATGAT 1319
consensus_9923#1      GAAGCGCGCGAGGGATCCTCCCGCCATAAGAAATCCCAGTCAGCTACCAGGCCTAATCAT 132
                      ****      *** ******     ********** ******* ** ***    *** **

consensus_9923#0      TCAGTCAAAAAGAAGAACTTACAAGTGGCAGAAGCTCTACGAATGCAAATGGAGGTTCAG 1379
consensus_9923#1      TCAGTGAAAAACAAGCCCTTCCAAGTGTCACAGGCTCTCGGAATCCAAATGCAGGTTCAC 192
                      ***** ***** ***  *** ****** ** * *****  **** ****** ******* 

consensus_9923#0      AAACAGCTTCATGAACAGTTAGAGGTGCAAAGGCAACTGCAGCTGCGAATCGAAGAACAC 1439
consensus_9923#1      AACCAGCTTCATCCCCAGTCACAGGTCCAAAGCCACCTCCACCTCCTAATCGAAGACCCC 252
                      ** *********   **** * **** ***** ** ** ** ** * ********* * *

consensus_9923#0      GCAAGATACCTGCAGAGAATACTGGAAGAGCAGCACAAGGTCAGCATCAGCAGCAACTCC 1499
consensus_9923#1      GCAAGATCCCTCCAGACAATCCTGCAAGAGCAGCTCAAGGTCAGCATCAGCAGCAACTCC 312
                      ******* *** **** *** *** ********* *************************

consensus_9923#0      CTCTCACTGAAACCCCCAGCCGAATCGCAACCGGAATCGCCAAAACCAACATCAGAAAAG 1559
consensus_9923#1      CTCTCACTGAAACCCCCAGCCGAATCGCAACCGGAATCGCCAAAACCAACATCAGAAAAG 372
                      ************************************************************

consensus_9923#0      AAGGAGGCCGAATCCGAAGCAGGCGCCGCCACTTCAGCTCAGCCATCATCCGAGGATAAA 1619
consensus_9923#1      AAGGAGGCCGAATCCGAAGCAGGCGCCGCCACTTCAGCTCAGCCATCATCCGAGGATAAA 432
                      ************************************************************

consensus_9923#0      TCACCAGACGCAGAATGCAAGTCGTCGCCGCCGGTGGGTAGCAAGAGAGCTAGGGTTCAT 1679
consensus_9923#1      TCACCAGACGCAGAATGCAAGTCGTCGCCGCCGGTGGGTAGCAAGAGAGCTAGGGTTCAT 492
                      ************************************************************

consensus_9923#0      GTCGGCGATGAGCACCAGTGTTCATAGCTTGTGTAGAGAGGAAGAAGGCAAGGATTTCTC 1739
consensus_9923#1      GTCGGCGATGAGCACCAGTGTTCATAGCTTGTGTAAAGAGGAAGAAGGCAAGGATTTCTC 552
                      *********************************** ************************

consensus_9923#0      AGCTGCATGCAAATGCATCTCTCTTCTTGAGAATTTTAGCCACTGTATATAAATTTGGAC 1799
consensus_9923#1      AGCTGCATGCAAATGCATCTCTCTTCTTGAGAATTTTAGCCACTGTATATAAATTTGGAC 612
                      ************************************************************

consensus_9923#0      TTTTGGGGAATGAGAATCTGAATTTGGAAGCAGATAAATAATAATCAAAAATCAAAAAAA 1859
consensus_9923#1      TTTTGGGGAATGAGAATCTGAATTTGGAAGCAGATAA----------------------- 649
                      *************************************                       

consensus_9923#0      AGGA 1863
consensus_9923#1      ----
                          




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)