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Oryza sativa
cluster # 9959 cluster # 9959       Sequences # 7       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9959#0 length = 1373 sequences # 3  
consensus_9959#1 length = 682 sequences # 3  
consensus_9959#2 length = 540 sequences # 1  

consensusID : consensus_9959#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1373
fasta sequence
                              [TCTCCTTCCTCCTCCTCCTCGTCGCGAACACCTGGCGCGAGCGATTCTTGGCTTCCCAATTTTGCGACGGCGATCAATCTTTGGGTTTTCTTGGTGTTCGATCGATCAGAGCAGCTGAGGCGAGGCAATGGAAGGCGTTGTTGACGGGAGCGGCGCGCAGCTGGTGGTGGCGGAGCTGGTGCGCGTGCAGGGGCTGCTCCGGCAGCTCGAGGCCCACCTGAGCGCGCCGTGCTCCGTCGAGCTCTGCCGCGGCCTCGTCGCGCAGATCGTCGCGCTCACGGACAGGTCCATCGGCATCGCCACCCGGTCCTTCTCCTCCGCCTCCGGCGGCGGCGCGCATTTCGCGGACACGGCGCCGCCGATGCCGGCGCTGACGTCGTGCACGCCCAGCCCGCTCAGCGACGGCTCCGACCACCAGCCGTTCCGGACCACCAACGCCAAGAAGAGGAAGACGACGGCGAGGTGGACGAGCCAGGTGAGGGTGAGCGCGGCGGGCGGCGCGGAGGGGCCAGCCGACGACGGGCACAGCTGGAGGAAGTACGGGCAGAAGGACATCCTGGGCGCCAAGCACCCGCGCGGCTACTACCGCTGCACCCACCGCAACACGCAGGGATGCACCGCCACCAAGCAGGTCCAGCGCACCGACGACGACGCCTCCCTCTTCGACGTCGTCTACCACGGCGAGCACACCTGCCGCCCGGGCGCCGCCAGCGCCGCCGCCGCCAAGAGGCCGCACGCGCAGACGCTGCTGCAGAGCCTCAGCGCCAGCCTCACCGTGAACACGGACACCAACACGCCGCTGACGCCGGAGAACCGCGCGCCGGCGCCGCCGCTGCAGCAGCAGCAGCAGCAGCAGAGCGTGTCGGCGTCGCCCGTGGCGTCGGACTCGTACGGCCTGGGCGGCGCCGGGTACGGGGACTGGCGCTGCTGCGACGGCGACCTGCAGGAGGTCGTGTCGGCGCTCGCCACCGTGACGTCGGCCCCCGACCACGCCGCCATGGACGCCGCCGACTTCATGAGCTACTGCTTCGACTTCGACCCGGCGGTGTACGGCGGCATCGTCGGCACGCCGAGCTTCTTCCTATGAGGAAGAAAAGCCATAGCAGAGCAGAGCAGAGGCCCTGTCCATCCATGGTGGCAGGAGGGAAGAAGAGGAAAGCTTAAGCTTTGCTCTTCAAGGCTTGAGCTTCTTCTTCCTAAGTAAGATCAGTGCAGGTGTAAGCAGTAATTTAGCTTAGGATATCTCTTGTTTCTATTCTTTCTTTAATTTCCTTTTGTTTCTCCCAACTCTCTCTCATGGAGTTTGGATTTTGCTGGTTTCTGTCAAGCAAAAGAGAGGAAAATAAGAAGATTTTGTTACTAAAAAAAAAAGA]

[+] EMBL AK111606             [TCTCCTTCCTCCTCCTCCTCGTCGCGAACACCTGGCGCGAGCGATTCTTGGCTTCCCAATTTTGCGACGGCGATCAATCTTTGGGTTTTCTTGGTGTTCGATCGATCAGAGCAGCTGAGGCGAGGCAATGGAAGGCGTTGTTGACGGGAGCGGCGCGCAGCTGGTGGTGGCGGAGCTGGTGCGCGTGCAGGGGCTGCTCCGGCAGCTCGAGGCCCACCTGAGCGCGCCGTGCTCCGTCGAGCTCTGCCGCGGCCTCGTCGCGCAGATCGTCGCGCTCACGGACAGGTCCATCGGCATCGCCACCCGGTCCTTCTCCTCCGCCTCCGGCGGCGGCGCGCATTTCGCGGACACGGCGCCGCCGATGCCGGCGCTGACGTCGTGCACGCCCAGCCCGCTCAGCGACGGCTCCGACCACCAGCCGTTCCGGACCACCAACGCCAAGAAGAGGAAGACGACGGCGAGGTGGACGAGCCAGGTGAGGGTGAGCGCGGCGGGCGGCGCGGAGGGGCCAGCCGACGACGGGCACAGCTGGAGGAAGTACGGGCAGAAGGACATCCTGGGCGCCAAGCACCCGCGCGGCTACTACCGCTGCACCCACCGCAACACGCAGGGATGCACCGCCACCAAGCAGGTCCAGCGCACCGACGACGACGCCTCCCTCTTCGACGTCGTCTACCACGGCGAGCACACCTGCCGCCCGGGCGCCGCCAGCGCCGCCGCCGCCAAGAGGCCGCACGCGCAGACGCTGCTGCAGAGCCTCAGCGCCAGCCTCACCGTGAACACGGACACCAACACGCCGCTGACGCCGGAGAACCGCGCGCCGGCGCCGCCGCTGCAGCAGCAGCAGCAGCAGCAGAGCGTGTCGGCGTCGCCCGTGGCGTCGGACTCGTACGGCCTGGGCGGCGCCGGGTACGGGGACTGGCGCTGCTGCGACGGCGACCTGCAGGAGGTCGTGTCGGCGCTCGCCACCGTGACGTCGGCCCCCGACCACGCCGCCATGGACGCCGCCGACTTCATGAGCTACTGCTTCGACTTCGACCCGGCGGTGTACGGCGGCATCGTCGGCACGCCGAGCTTCTTCCTATGAGGAAGAAAAGCCATAGCAGAGCAGAGCAGAGGCCCTGTCCATCCATGGTGGCAGGAGGGAAGAAGAGGAAAGCTTAAGCTTTGCTCTTCAAGGCTTGAGCTTCTTCTTCCTAAGTAAGATCAGTGCAGGTGTAAGCAGTAATTTAGCTTAGGATATCTCTTGTTTCTATTCTTTCTTTAATTTCCTTTTGTTTCTCCCAACTCTCTCTCATGGAGTTTGGATTTTGCTGGTTTCTGTCAAGCAAAAGAGAGGAAAATAAGAAGATTTTGTTA              ]
[+] EMBL AU166522             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    CGACGGGCACAGCTGGAGGAAGTACGGGCAGAAGGACATCCTGGGCGCCAAGCACCCGCGCGGCTACTACCGCTGCACCCACCGCAACACGCAGGGATGCACCGCCACCAAGCAGGTCCAGCGCACCGACGACGACGCCTCCCTCTTCGACGTCGTCTACCACGGCGAGCACACCTGCCGCCCGGGCGCCGCCAGCGCCGCCGCCGCCAAGAGGCCGCACGCGCAGACGCTGCTGCAGAGCCTCAGCGCCAGCCTCACCGTGAACACGGACACCAACACGCCGCTGACGCCGGAGAACCGCGCGCCGGCGCCGCCGCTGCAGCAGCAGCAGCAGCAGCAGAGCGTGTCGGCGTCGCCCGTGGCGTCGGACTCGTACGGCCTGGGCGGCGCCGGGTACGGGGACT                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CB622626             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GGGATGCACCGCCACCAAGCAGGTCCAGCGCACCGACGACGACGCCTCCCTCTTCGACGTCGTCTACCACGGCGAGCACACCTGCCGCCCGGGCGCCGCCAGCGCCGCCGCCGCCAAGAGGCCGCACGCGCAGACGCTGCTGCAGAGCCTCAGCGCCAGCCTCACCGTGAACACGGACACCAACACGCCGCTGACGCCGGAGAACCGCGCGCCGGCGCCGCCGCTGCAGCAGCAGCAGCAGCAGCAGAGCGTGTCGGCGTCGCCCGTGGCGTCGGACTCGTACGGCCTGGGCGGCGCCGGGTACGGGGACTGGCGCTGCTGCGACGGCGACCTGCAGGAGGTCGTGTCGGCGCTCGCCACCGTGACGTCGGCCCCCGACCACGCCGCCATGGACGCCGCCGACTTCATGAGCTACTGCTTCGACTTCGACCCGGCGGTGTACGGCGGCATCGTCGGCACGCCGAGCTTCTTCCTATGAGGAAGAAAAGCCATAGCAGAGCAGAGCAGAGGCCCTGTCCATCCATGGTGGCAGGAGGGAAGAAGAGGAAAGCTTAAGCTTTGCTCTTCAAGGCTTGAGCTTCTTCTTCCTAAGTAAGATCAGTGCAGGTGTAAGCAGTAATTTAGCTTAGGATATCTCTTGTTTCTATTCTTTCTTTAATTTCCTTTTGTTTCTCCCAACTCTCTCTCATGGAGTTTGGATTTTGCTGGTTTCTGTCAAGCAAAAGAGAGGAAAATAAGAAGATTTTGTTACTAAAAAAAAAAGA]


>consensus_9959#0 TCTCCTTCCTCCTCCTCCTCGTCGCGAACACCTGGCGCGAGCGATTCTTGGCTTCCCAAT TTTGCGACGGCGATCAATCTTTGGGTTTTCTTGGTGTTCGATCGATCAGAGCAGCTGAGG CGAGGCAATGGAAGGCGTTGTTGACGGGAGCGGCGCGCAGCTGGTGGTGGCGGAGCTGGT GCGCGTGCAGGGGCTGCTCCGGCAGCTCGAGGCCCACCTGAGCGCGCCGTGCTCCGTCGA GCTCTGCCGCGGCCTCGTCGCGCAGATCGTCGCGCTCACGGACAGGTCCATCGGCATCGC CACCCGGTCCTTCTCCTCCGCCTCCGGCGGCGGCGCGCATTTCGCGGACACGGCGCCGCC GATGCCGGCGCTGACGTCGTGCACGCCCAGCCCGCTCAGCGACGGCTCCGACCACCAGCC GTTCCGGACCACCAACGCCAAGAAGAGGAAGACGACGGCGAGGTGGACGAGCCAGGTGAG GGTGAGCGCGGCGGGCGGCGCGGAGGGGCCAGCCGACGACGGGCACAGCTGGAGGAAGTA CGGGCAGAAGGACATCCTGGGCGCCAAGCACCCGCGCGGCTACTACCGCTGCACCCACCG CAACACGCAGGGATGCACCGCCACCAAGCAGGTCCAGCGCACCGACGACGACGCCTCCCT CTTCGACGTCGTCTACCACGGCGAGCACACCTGCCGCCCGGGCGCCGCCAGCGCCGCCGC CGCCAAGAGGCCGCACGCGCAGACGCTGCTGCAGAGCCTCAGCGCCAGCCTCACCGTGAA CACGGACACCAACACGCCGCTGACGCCGGAGAACCGCGCGCCGGCGCCGCCGCTGCAGCA GCAGCAGCAGCAGCAGAGCGTGTCGGCGTCGCCCGTGGCGTCGGACTCGTACGGCCTGGG CGGCGCCGGGTACGGGGACTGGCGCTGCTGCGACGGCGACCTGCAGGAGGTCGTGTCGGC GCTCGCCACCGTGACGTCGGCCCCCGACCACGCCGCCATGGACGCCGCCGACTTCATGAG CTACTGCTTCGACTTCGACCCGGCGGTGTACGGCGGCATCGTCGGCACGCCGAGCTTCTT CCTATGAGGAAGAAAAGCCATAGCAGAGCAGAGCAGAGGCCCTGTCCATCCATGGTGGCA GGAGGGAAGAAGAGGAAAGCTTAAGCTTTGCTCTTCAAGGCTTGAGCTTCTTCTTCCTAA GTAAGATCAGTGCAGGTGTAAGCAGTAATTTAGCTTAGGATATCTCTTGTTTCTATTCTT TCTTTAATTTCCTTTTGTTTCTCCCAACTCTCTCTCATGGAGTTTGGATTTTGCTGGTTT CTGTCAAGCAAAAGAGAGGAAAATAAGAAGATTTTGTTACTAAAAAAAAAAGA



consensusID : consensus_9959#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 682
fasta sequence
                              [GGCGTCGGACTTCGTACGCCTGGGCGGCGCCGGGTACGGGGACTGGCGCTGCTGCGACGGCGACCTGCAGGAGGTCGTGTCGGCGCTCGCCACCGTGACGTCGGCCCCCGACCACGCCGCCATGGACGCCGCCGACTTCATGAGCTACTGCTTCGACTTCGACCCGGCGGTGTACGGCGGCATCGTCGGCACGCCGAGCTTCTTCCTATGAGGAAGAAAAGCCATAGCAGAGCAGAGCAGAGGCCCTGTCCATCCATGGTGGCAGGAGGGAAGAAGAGGAAAGCTTAAGCTTTGCTCTTCAAGGCTTGAGCTTCTTCTTCCTAAGTAAGATCAGTGCAGGTGTAAGCAGTAATTTAGCTTAGGATATCTCTTGTTTCTATTCTTTCTTTAATTTCCTTTTGTTTCTCCCAACTCTCTCTCATGGAGTTTGGATTTTGCTGGTTTCTGTCAAGCAAAAGAGAGGAAAATAAGAAGATTTTGTTACTACTGTTCTGATGAAAAAAAAAAAGAGATTTGTTTGGAGAATGATTCACTTTTTTGGGGAGAAAAGGTTCAACCTTTCTGTTATCCATCTTGCCAATTAGTGGATGGATGAGAGAGAGCCTAGGCATGAAACTGTAGGGACAGCAATTCATATCTTGACATAAGTGGCAAGTTGGACCAAATCATAGTTCAAAAAAAA]

[+] EMBL BM419531             [GGCGTCGGACTTCGTACGCCTGGGCGGCGCCGGGTACGGGGACTGGCGCTGCTGCGACGGCGACCTGCAGGAGGTCGTGTCGGCGCTCGCCACCGTGACGTCGGCCCCCGACCACGCCGCCATGGACGCCGCCGACTTCATGAGCTACTGCTTCGACTTCGACCCGGCGGTGTACGGCGGCATCGTCGGCACGCCGAGCTTCTTCCTATGAGGAAGAAAAGCCATAGCAGAGCAGAGCAGAGGCCCTGTCCATCCATGGTGGCAGGAGGGAAGAAGAGGAAAGCTTAAGCTTTGCTCTTCAAGGCTTGAGCTTCTTCTTCCTAAGTAAGATCAGTGCAGGTGTAAGCAGTAATTTAGCTTAGGATATCTCTTGTTTCTATTCTTTCTTTAATTTCCTTTTGTTTCTCCCAACTCTCTCTCATGGAGTTTGGATTTTGCTGGTTTCTGTCAAGCNAAAGAGAGGAAAATAAGAAGATTTTGTTACTACTGTTCTGATGAAAAAAAAAA                                                                                                                                                                               ]
[+] EMBL AU057147             [                                                                                                                                                                 ggncnGCGGTGTACGGCGGCATCGTCGGCACGCCGAGCTTCTTCCTATGAGGAAGAAAAGCCATAGCAGAGCAGAGCAGAGGCCCTGTCCATCCATGGTGGCAGGAGGGAAGAAGAGGAAAGCTTAAGCTTTGCTCTTCAAGGCTTGAGCTTCTTCTTCCTAAGTAAGATCAGTGCAGGTGTAAGCAGTAATTTAGCTTAGGATATCTCTTGTTTCTATTCTTTCTTTAATTTCCTTTTGTTTCTCCCAACTCTCTCTCATGGAGTTTGGATTTTGCTGGTTTCTGTCAAGCAAAAGAGAGGAAAATAAGAAGATTTTGTTACTNCTGTT   AAAAAAAAAAAAAA                                                                                                                                                                              ]
[+] EMBL AU166521             [                                                                                                                                                                                                                                            GCAGAGGCCCTGTCCATCCATGGTGGCAGGAGGGAAGAAGAGGAAAGCTTAAGCTTTGCTCTTCAAGGCTTGAGCTTCTTCTTCCTAAGTAAGATCAGTGCAGGTGTAAGCAGTAATTTAGCTTAGGATATCTCTTGTTTCTATTCTTTCTTTAATTTCCTTTTGTTTCTCCCAACTCTCTCTCATGGAGTTTGGATTTTGCTGGTTTCTGTCAAGCAAAAGAGAGGAAAATAAGAAGATTTTGTTACTACTGTTCTGATGAATCCAAAAGTGAGATTTGTTTGGAGAATGATTCACTTTTTTGGGGAGAAAAGGTTCAACCTTTCTGTTATCCATCTTGCCAATTAGTGGATGGATGAGAGAGAGCCTAGGCATGAAACTGTAGGGACAGCAATTCATATCTTGACATAAGTGGCAAGTTGGACCAAATCATAGTTCAAAAAAAA]


>consensus_9959#1 GGCGTCGGACTTCGTACGCCTGGGCGGCGCCGGGTACGGGGACTGGCGCTGCTGCGACGG CGACCTGCAGGAGGTCGTGTCGGCGCTCGCCACCGTGACGTCGGCCCCCGACCACGCCGC CATGGACGCCGCCGACTTCATGAGCTACTGCTTCGACTTCGACCCGGCGGTGTACGGCGG CATCGTCGGCACGCCGAGCTTCTTCCTATGAGGAAGAAAAGCCATAGCAGAGCAGAGCAG AGGCCCTGTCCATCCATGGTGGCAGGAGGGAAGAAGAGGAAAGCTTAAGCTTTGCTCTTC AAGGCTTGAGCTTCTTCTTCCTAAGTAAGATCAGTGCAGGTGTAAGCAGTAATTTAGCTT AGGATATCTCTTGTTTCTATTCTTTCTTTAATTTCCTTTTGTTTCTCCCAACTCTCTCTC ATGGAGTTTGGATTTTGCTGGTTTCTGTCAAGCAAAAGAGAGGAAAATAAGAAGATTTTG TTACTACTGTTCTGATGAAAAAAAAAAAGAGATTTGTTTGGAGAATGATTCACTTTTTTG GGGAGAAAAGGTTCAACCTTTCTGTTATCCATCTTGCCAATTAGTGGATGGATGAGAGAG AGCCTAGGCATGAAACTGTAGGGACAGCAATTCATATCTTGACATAAGTGGCAAGTTGGA CCAAATCATAGTTCAAAAAAAA



consensusID : consensus_9959#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 540
fasta sequence
                              [GCGGCCCCGGGTACGGGGAATGGCGATGCTTAGTCGGCGACCCTCAAAAGATTTGAGTTGGCGCTACCCACCGTAAAGTTGGCCCCCGACCACGCCGCCATGGACGCCGCCGACTTTCATAAGGTAATGGGTTTGATTTTGACCCGGCCAGTGTACGGCGGGATTGGTGGGCCCGCCAAGGTTTTTTCTTATGAGGAAGAAAAGCCATAGCAGAGCAGAGCAGAGGCCCTGTCCATCCATGGTGGCAGGAGGGAAGAAGAGGAAAGCTTAAGCTTTGCTCTTCAAGGCTTGAGCTTCTTCTTCCTAAGTAAGATCAGTGCAGGTGTAAGCAGTAATTTAGCTTAGGATATCTCTTGTTTCTATTCTTTCTTTAATTTCCTTTTGTTTCTCCCAACTCTCTCTCATGGAGTTTGGATTTTGCTGGTTTCTGTCAAGCAAAAGAGAGGAAAATAAGAAGATTTTGTTACTACTGTTCTGATGAATCGGAAAGTGAGATTTGTTTGGAGAAAAACCAAAAAAAAAAAAACTCGAGACTAGTTC]

[-] EMBL AW155518             [GCGGCCCCGGGTACGGGGAATGGCGATGCTTAGTCGGCGACCCTCAAAAGATTTGAGTTGGCGCTACCCACCGTAAAGTTGGCCCCCGACCACGCCGCCATGGACGCCGCCGACTTTCATAAGGTAATGGGTTTGATTTTGACCCGGCCAGTGTACGGCGGGATTGGTGGGCCCGCCAAGGTTTTTTCTTATGAGGAAGAAAAGCCATAGCAGAGCAGAGCAGAGGCCCTGTCCATCCATGGTGGCAGGAGGGAAGAAGAGGAAAGCTTAAGCTTTGCTCTTCAAGGCTTGAGCTTCTTCTTCCTAAGTAAGATCAGTGCAGGTGTAAGCAGTAATTTAGCTTAGGATATCTCTTGTTTCTATTCTTTCTTTAATTTCCTTTTGTTTCTCCCAACTCTCTCTCATGGAGTTTGGATTTTGCTGGTTTCTGTCAAGCAAAAGAGAGGAAAATAAGAAGATTTTGTTACTACTGTTCTGATGAATCGGAAAGTGAGATTTGTTTGGAGAAAAACCAAAAAAAAAAAAACTCGAGACTAGTTC]


>consensus_9959#2 GCGGCCCCGGGTACGGGGAATGGCGATGCTTAGTCGGCGACCCTCAAAAGATTTGAGTTG GCGCTACCCACCGTAAAGTTGGCCCCCGACCACGCCGCCATGGACGCCGCCGACTTTCAT AAGGTAATGGGTTTGATTTTGACCCGGCCAGTGTACGGCGGGATTGGTGGGCCCGCCAAG GTTTTTTCTTATGAGGAAGAAAAGCCATAGCAGAGCAGAGCAGAGGCCCTGTCCATCCAT GGTGGCAGGAGGGAAGAAGAGGAAAGCTTAAGCTTTGCTCTTCAAGGCTTGAGCTTCTTC TTCCTAAGTAAGATCAGTGCAGGTGTAAGCAGTAATTTAGCTTAGGATATCTCTTGTTTC TATTCTTTCTTTAATTTCCTTTTGTTTCTCCCAACTCTCTCTCATGGAGTTTGGATTTTG CTGGTTTCTGTCAAGCAAAAGAGAGGAAAATAAGAAGATTTTGTTACTACTGTTCTGATG AATCGGAAAGTGAGATTTGTTTGGAGAAAAACCAAAAAAAAAAAAACTCGAGACTAGTTC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9959#1      ------------------------------------------------------------
consensus_9959#2      ------------------------------------------------------------
consensus_9959#0      TCTCCTTCCTCCTCCTCCTCGTCGCGAACACCTGGCGCGAGCGATTCTTGGCTTCCCAAT 60
                                                                                  

consensus_9959#1      ------------------------------------------------------------
consensus_9959#2      ------------------------------------------------------------
consensus_9959#0      TTTGCGACGGCGATCAATCTTTGGGTTTTCTTGGTGTTCGATCGATCAGAGCAGCTGAGG 120
                                                                                  

consensus_9959#1      ------------------------------------------------------------
consensus_9959#2      ------------------------------------------------------------
consensus_9959#0      CGAGGCAATGGAAGGCGTTGTTGACGGGAGCGGCGCGCAGCTGGTGGTGGCGGAGCTGGT 180
                                                                                  

consensus_9959#1      ------------------------------------------------------------
consensus_9959#2      ------------------------------------------------------------
consensus_9959#0      GCGCGTGCAGGGGCTGCTCCGGCAGCTCGAGGCCCACCTGAGCGCGCCGTGCTCCGTCGA 240
                                                                                  

consensus_9959#1      ------------------------------------------------------------
consensus_9959#2      ------------------------------------------------------------
consensus_9959#0      GCTCTGCCGCGGCCTCGTCGCGCAGATCGTCGCGCTCACGGACAGGTCCATCGGCATCGC 300
                                                                                  

consensus_9959#1      ------------------------------------------------------------
consensus_9959#2      ------------------------------------------------------------
consensus_9959#0      CACCCGGTCCTTCTCCTCCGCCTCCGGCGGCGGCGCGCATTTCGCGGACACGGCGCCGCC 360
                                                                                  

consensus_9959#1      ------------------------------------------------------------
consensus_9959#2      ------------------------------------------------------------
consensus_9959#0      GATGCCGGCGCTGACGTCGTGCACGCCCAGCCCGCTCAGCGACGGCTCCGACCACCAGCC 420
                                                                                  

consensus_9959#1      ------------------------------------------------------------
consensus_9959#2      ------------------------------------------------------------
consensus_9959#0      GTTCCGGACCACCAACGCCAAGAAGAGGAAGACGACGGCGAGGTGGACGAGCCAGGTGAG 480
                                                                                  

consensus_9959#1      ------------------------------------------------------------
consensus_9959#2      ------------------------------------------------------------
consensus_9959#0      GGTGAGCGCGGCGGGCGGCGCGGAGGGGCCAGCCGACGACGGGCACAGCTGGAGGAAGTA 540
                                                                                  

consensus_9959#1      ------------------------------------------------------------
consensus_9959#2      ------------------------------------------------------------
consensus_9959#0      CGGGCAGAAGGACATCCTGGGCGCCAAGCACCCGCGCGGCTACTACCGCTGCACCCACCG 600
                                                                                  

consensus_9959#1      ------------------------------------------------------------
consensus_9959#2      ------------------------------------------------------------
consensus_9959#0      CAACACGCAGGGATGCACCGCCACCAAGCAGGTCCAGCGCACCGACGACGACGCCTCCCT 660
                                                                                  

consensus_9959#1      ------------------------------------------------------------
consensus_9959#2      ------------------------------------------------------------
consensus_9959#0      CTTCGACGTCGTCTACCACGGCGAGCACACCTGCCGCCCGGGCGCCGCCAGCGCCGCCGC 720
                                                                                  

consensus_9959#1      ------------------------------------------------------------
consensus_9959#2      ------------------------------------------------------------
consensus_9959#0      CGCCAAGAGGCCGCACGCGCAGACGCTGCTGCAGAGCCTCAGCGCCAGCCTCACCGTGAA 780
                                                                                  

consensus_9959#1      ------------------------------------------------------------
consensus_9959#2      ------------------------------------------------------------
consensus_9959#0      CACGGACACCAACACGCCGCTGACGCCGGAGAACCGCGCGCCGGCGCCGCCGCTGCAGCA 840
                                                                                  

consensus_9959#1      ------------------------------------GGCGTCGGACTTCGTACGCCTGGG 24
consensus_9959#2      -----------------------------------------------------------G 1
consensus_9959#0      GCAGCAGCAGCAGCAGAGCGTGTCGGCGTCGCCCGTGGCGTCGGACTCGTACGGCCTGGG 900
                                                                                 *

consensus_9959#1      CGGCGCCGGGTACGGGGACTGGCGCTGCTGCGACGGCGACCTGCAGGAGGTC-GTGTCGG 83
consensus_9959#2      CGGCCCCGGGTACGGGGAATGGCGATGCTTAGTCGGCGACCCTCAAAAGATTTGAGTTGG 61
consensus_9959#0      CGGCGCCGGGTACGGGGACTGGCGCTGCTGCGACGGCGACCTGCAGGAGGTC-GTGTCGG 959
                      **** ************* ***** ****  * ********  **  ** *  * ** **

consensus_9959#1      CGCTCGCCACCGTGACGTCGGCCCCCGACCACGCCGCCATGGACGCCGCCGACTT-CATG 142
consensus_9959#2      CGCTACCCACCGTAAAGTTGGCCCCCGACCACGCCGCCATGGACGCCGCCGACTTTCATA 121
consensus_9959#0      CGCTCGCCACCGTGACGTCGGCCCCCGACCACGCCGCCATGGACGCCGCCGACTT-CATG 1018
                      ****  ******* * ** ************************************ *** 

consensus_9959#1      AGCTACTGC-TTCGACTTCGACCCGGC-GGTGTACGGCGGCATCG-TCGGCACGCCGAG- 198
consensus_9959#2      AGGTAATGGGTTTGATTTTGACCCGGCCAGTGTACGGCGGGATTGGTGGGCCCGCCAAGG 181
consensus_9959#0      AGCTACTGC-TTCGACTTCGACCCGGC-GGTGTACGGCGGCATCG-TCGGCACGCCGAG- 1074
                      ** ** **  ** ** ** ********  *********** ** * * *** **** ** 

consensus_9959#1      CTTCTTCCTATGAGGAAGAAAAGCCATAGCAGAGCAGAGCAGAGGCCCTGTCCATCCATG 258
consensus_9959#2      TTTTTTCTTATGAGGAAGAAAAGCCATAGCAGAGCAGAGCAGAGGCCCTGTCCATCCATG 241
consensus_9959#0      CTTCTTCCTATGAGGAAGAAAAGCCATAGCAGAGCAGAGCAGAGGCCCTGTCCATCCATG 1134
                       ** *** ****************************************************

consensus_9959#1      GTGGCAGGAGGGAAGAAGAGGAAAGCTTAAGCTTTGCTCTTCAAGGCTTGAGCTTCTTCT 318
consensus_9959#2      GTGGCAGGAGGGAAGAAGAGGAAAGCTTAAGCTTTGCTCTTCAAGGCTTGAGCTTCTTCT 301
consensus_9959#0      GTGGCAGGAGGGAAGAAGAGGAAAGCTTAAGCTTTGCTCTTCAAGGCTTGAGCTTCTTCT 1194
                      ************************************************************

consensus_9959#1      TCCTAAGTAAGATCAGTGCAGGTGTAAGCAGTAATTTAGCTTAGGATATCTCTTGTTTCT 378
consensus_9959#2      TCCTAAGTAAGATCAGTGCAGGTGTAAGCAGTAATTTAGCTTAGGATATCTCTTGTTTCT 361
consensus_9959#0      TCCTAAGTAAGATCAGTGCAGGTGTAAGCAGTAATTTAGCTTAGGATATCTCTTGTTTCT 1254
                      ************************************************************

consensus_9959#1      ATTCTTTCTTTAATTTCCTTTTGTTTCTCCCAACTCTCTCTCATGGAGTTTGGATTTTGC 438
consensus_9959#2      ATTCTTTCTTTAATTTCCTTTTGTTTCTCCCAACTCTCTCTCATGGAGTTTGGATTTTGC 421
consensus_9959#0      ATTCTTTCTTTAATTTCCTTTTGTTTCTCCCAACTCTCTCTCATGGAGTTTGGATTTTGC 1314
                      ************************************************************

consensus_9959#1      TGGTTTCTGTCAAGCAAAAGAGAGGAAAATAAGAAGATTTTGTTACTACTGTTCTGATGA 498
consensus_9959#2      TGGTTTCTGTCAAGCAAAAGAGAGGAAAATAAGAAGATTTTGTTACTACTGTTCTGATGA 481
consensus_9959#0      TGGTTTCTGTCAAGCAAAAGAGAGGAAAATAAGAAGATTTTGTTACTA-----------A 1363
                      ************************************************           *

consensus_9959#1      AAAAAAAAAAGAGATTTGTTTGGAGAATGATTCACTTTTTTGGGGAGAAAAGGTTCAACC 558
consensus_9959#2      ATCGGAAAGTGAGATTTGTTTGGAGAAAAACCAA--------AAAAAAAAAAACTCGAGA 533
consensus_9959#0      AAAAAAAAGA-------------------------------------------------- 1373
                      *    ***                                                    

consensus_9959#1      TTTCTGTTATCCATCTTGCCAATTAGTGGATGGATGAGAGAGAGCCTAGGCATGAAACTG 618
consensus_9959#2      CTAGTTC----------------------------------------------------- 540
consensus_9959#0      ------------------------------------------------------------
                                                                                  

consensus_9959#1      TAGGGACAGCAATTCATATCTTGACATAAGTGGCAAGTTGGACCAAATCATAGTTCAAAA 678
consensus_9959#2      ------------------------------------------------------------
consensus_9959#0      ------------------------------------------------------------
                                                                                  

consensus_9959#1      AAAA 682
consensus_9959#2      ----
consensus_9959#0      ----
                          




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)