These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9990#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1706 fasta sequence [CAATCGCCCATCGCCGTCGTACTCCCCATCTCGTCGCTACCGCCGTCCCCACCGCACCCTCCCCCTTCACCGCTGGCGGTGAAACCAGCCGCCGCCGTCCGAGGAGGTTTGTCCTCTCTCTCGCGCGCGGTCTCATCTCTTCCTGCTCTCTCTCGTTCCTCTCTTATCCTCACGCGCAAGAGAGGGAGAGCGGAGATGGCGCGCGGCGACTGGGTGGCGGCCGAGCGCGGCGGCGCGGCCGGGCGGCTTGGCGTGGCGTCGACGTCGTGTGGCGGCATGGCGATGGGAGCAGTGGAGAAGTGGTGCATCGGTGGATGGGGAAGCAGAGGAGGGACCACAAGGCGGCGGCCGACTCGGTCGAGACGACGCGGCCGCTGGGGTGATCGCACGTCGGCGCTCGGCCCGGCGCCATGGTGGCTTGGGTCGGGCGGAGACGGCGATGCCGCGCATATGGCGTGGGTGACGGCGCGGCCACTCGGCGGGGAGGCCAAGACGTCGGCGAGGCAGCGGCCGGGCGTGTCGGCGCAGGCGACGGCGCGGCGGCAACCAGACTCGGCTGCGCGGCGGCGCGGCCGAGGCAGACCTTAAAAGAAAAATAAAAAAAACAACCTGCCGCCCGCGCCGTGCAACCTGGAGGATCGAGGCGGGTTGTTCTGGTCGATTTCGGCCACGACGGGGGCTGGGCAGTTCCAGGAGGCGCTTCGCATGACGGGCTCGGCAGGGGGCAGCGCACTCCGAGTCCACGGCGTCACCACCATGAGCAGGAACCCCGACGGCTGTCCTCCATGGCTCATACGACTGCACCGTCCGGCCTCCAACACAACGGCTGTCCTCCTAGAGTCCCGGTGAACGCAGATCGACCTCATGGGTGACTTACAGGAGCTTCCCGGACCTACGGCAACAGTGATCGAGGAACTCTGCTGCTCGAAATTAGGAGGTCTGTGTTTTGTTTTACCTGTTACGAATTTGCTAATTCTGGATTCTTTGCTTCCTCCCAAAGACGAACACCACAAGATTTCCGTATATGCATGCTTGCGTAATAATATAGCATCAACACATGAACACGATAATATAGTGTCAACCTGTTTCATATGTGCTCTGAGCTTTCTATTTTAGCCCTTTCGCAGCCAGTTTGTGTTGAAACTATTAGTAATCAATCTGTTATATGATAACTCAGGAACTGCAGGTTGGGCCTGAACTAAATTTTTTGAGAAACCTTTTCTGTTCTACAGATGGGATTCTAGAATCCATTGCTTACATGATAATGAAGGTTTGGTGATTACCTGAAATTTGGAAGCAGGTACCTACCGATAATCGTCCATGTTATACTGTTAAATTTAAATGCATCCCTTGATAGCAAAAAAAAAAAGAAAAAACTATACTGTTACTACAAGATTGAGTTATGCACCGCTAACAACAAATATGAGTCATTAGAGTGAAAGAATGTTCTTAGACTAGAAGTTGTTTCAAGGGTGGAGATTGTTAGTAAAAACGTCCAGAGCCATCCTTCGGATAATTTATCCTTATTGATACTAAAAGTTGGATGATGTATTCACCTAGGTAGACCACTTTCTGATCACAAATTTTGCAAATGGAACTATGAATGTGCAGAAATTAGATCTAAATTGCCGTGGCATATAGGTACTTCTAAGTGGCTCTGCTTTTAAAACATGCTACGTGAATGGAGCCATCCTTGTATTATACTA] [+] EMBL AK106340 [CAATCGCCCATCGCCGTCGTACTCCCCATCTCGTCGCTACCGCCGTCCCCACCGCACCCTCCCCCTTCACCGCTGGCGGTGAAACCAGCCGCCGCCGTCCGAGGAGGTTTGTCCTCTCTCTCGCGCGCGGTCTCATCTCTTCCTGCTCTCTCTCGTTCCTCTCTTATCCTCACGCGCAAGAGAGGGAGAGCGGAGATGGCGCGCGGCGACTGGGTGGCGGCCGAGCGCGGCGGCGCGGCCGGGCGGCTTGGCGTGGCGTCGACGTCGTGTGGCGGCATGGCGATGGGAGCAGTGGAGAAGTGGTGCATCGGTGGATGGGGAAGCAGAGGAGGGACCACAAGGCGGCGGCCGACTCGGTCGAGACGACGCGGCCGCTGGGGTGATCGCACGTCGGCGCTCGGCCCGGCGCCATGGTGGCTTGGGTCGGGCGGAGACGGCGATGCCGCGCATATGGCGTGGGTGACGGCGCGGCCACTCGGCGGGGAGGCCAAGACGTCGGCGAGGCAGCGGCCGGGCGTGTCGGCGCAGGCGACGGCGCGGCGGCAACCAGACTCGGCTGCGCGGCGGCGCGGCCGAGGCAGACCTTAAAAGAAAAATAAAAAAAACAACCTGCCGCCCGCGCCGTGCAACCTGGAGGATCGAGGCGGGTTGTTCTGGTCGATTTCGGCCACGACGGGGGCTGGGCAGTTCCAGGAGGCGCTTCGCATGACGGGCTCGGCAGGGGGCAGCGCACTCCGAGTCCACGGCGTCACCACCATGAGCAGGAACCCCGACGGCTGTCCTCCATGGCTCATACGACTGCACCGTCCGGCCTCCAACACAACGGCTGTCCTCCTAGAGTCCCGGTGAACGCAGATCGACCTCATGGGTGACTTACAGGAGCTTCCCGGACCTACGGCAACAGTGATCGAGGAACTCTGCTGCTCGAAATTAGGAGGTCTGTGTTTTGTTTTACCTGTTACGAATTTGCTAATTCTGGATTCTTTGCTTCCTCCCAAAGACGAACACCACAAGATTTCCGTATATGCATGCTTGCGTAATAATATAGCATCAACACATGAACACGATAATATAGTGTCAACCTGTTTCATATGTGCTCTGAGCTTTCTATTTTAGCCCTTTCGCAGCCAGTTTGTGTTGAAACTATTAGTAATCAATCTGTTATATGATAACTCAGGAACTGCAGGTTGGGCCTGAACTAAATTTTTTGAGAAACCTTTTCTGTTCTACAGATGGGATTCTAGAATCCATTGCTTACATGATAATGAAGGTTTGGTGATTACCTGAAATTTGGAAGCAGGTACCTACCGATAATCGTCCATGTTATACTGTTAAATTTAAATGCATC ] [+] EMBL CF303785 [ GAACTGCAGGTTGGGCCTGAACTAAATTTTTTGAGAAACCTTTTCTGTTCTACAGATGGGATTCTAGAATCCATTGCTTACATGATAATGAAGGTTTGGTGATTACCTGAAATTTGGAAGCAGGTACCTACCGATAATCGTCCATGTTATACTGTTAAATTTAAATGCATCCCTTGATAGCAAAAAAAAAAAGAAAAAACTATACTGTTACTACAAGATTGAGTTATGCACCGCTAACAACAAATATGAGTCATTAGAGTGAAAGAATGTTCTTAGACTAGAAGTTGTTTCAAGGGTGGAGATTGTTAGTAAAAACGTCCAGAGCCATCCTTCGGATAATTTATCCTTATTGATACTAAAAGTTGGATGATGTATTCACCTAGGTAGACCACTTTCTGATCACAAATTTTGCAAATGGAACTATGAATGTGCAGAAATTAGATCTAAATTGCCGTGGCATATAGGTACTTCTAAGTGGCTCTGCTTTTAAAACATGCTACGTGAATGGAGCCATCCTTGTATTATACTA] consensusID : consensus_9990#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1625 fasta sequence [TCGCTGCAGCGGAGCAATCGCCCATCGCCGTCGTACTCCCCATCTCGTCGCTACCGCCGTCCCCACCGCACCCTCCCCCTTCACCGCTGGCGGTGAAACCAGCCGCCGCCGTCCGAGGAGGTCTGTCCTCTCTCTCGCGCGCGGTCTCATCTCTTCCTGCTCTCTCTCGTTCCTCTCTTATCCTCACGCGCAAGAGAGGGAGAGCGGAGATGGCGCGCGGCGACTGGGTGGCGGCCGAGCGCGGCGGCGCGGCCGGGCGGCTTGGCGTGGCGTCGACGTCGTGTGGCGGCATGGCGATGGGAGCAGTGGAGAAGTGGTGCATCGGTGGATGGGGAAGCAGAGGAGGGACCACAAGGCGGCGGCCGACTCGGTCGAGACGACGCGGCCGCTGGGGTGATCGCACGTCGGCGCTCGGCCCGGCGCCATGGTGGCTTGGGTCGGGCGGAGACGGCGATGCCGCGCATATGGCGTGGGTGACGGCGCGGCCACTCGGCGGGGAGGCCAAGACGTCGGCGAGGCAGCGGCCGGGCGTGTCGGCGCAGGCGACGGCGCGGCGGCAACCAGACTCGGCTGCGCGGCGGCGCGGCCGAGGCAGACCTTAAAAGAAAAATAAAAAAAAACAACCTGCCGCCCGCGCCGTGCAACCTGGAGGATCGAGGCGGGTTGTTCTGGTCGATTTCGGCCACGACGGGGGCTGGGCAGTTCCAGGAGGCGCTTCGCATGACGGGCTCGGCAGGGGGCAGCGCACTCCGAGTCCACGGCGTCACCACCATGAGCAGGAACCCCGACGGCTGTCCTCCATGGCTCATACGACTGCACCGTCCGGCCTCCAACACAACGGCTGTCCTCCTAGAGTCCCGGTGAACGCAGATCGACCTCATGGGTGACTTACAGGAGCTTCCCGGACCTACGGCAACAGTGATCGAGGAACTCTGCTGCTCGAAATTAGGAGATGGGATTCTAGAATCCATTGCTTACATGATAATGAAGGTTTGGTGATTACCTGAAATTTGGAAGCAGTATTGATTTTCTACTAGAAGATTGAAAGGAGGTACATGCCAGATCCACTATTCATTGCGGTGCTATTGTTAATTTATAGGTTCAAATTATTCAAGCTGTTGGTCTGAATTTATTCCCATACATCAGTTCAAGCTGTTGTGGATCCTAAGAACCAAGCTGGATTTATTGGACAACATCCTATTACGAGATCGCAAGAGATTCAGGTAGACTCTACGGGTGATTGCTAAGCACCAAGTAAAGAATTAATACAAAGGAAATTGTTAAGTCTGTCTTCTGTACTGCTAGAAGTTACAGGTGACGTACACGATTGTTTGTAGAAGAGGAAACTGAGGAAGGCTTCTATGCATAACGTGTCCATACCTTACTCAATTGTTTGGTGTCCATCAAAGAAATGTGCCAGCACGGAAGTCAGTAGATTTCTAGGCTTGCATATGTAGTAACGACAATCATGTATTTAGGTGCACTCGTCTATTATTATGCACTCATGAAATTTGGTTTGCTGGGGTGTAACCTCTGATCTCTCTTTACTTTTGAGCTTAATATATAAGTTGAATTAGAGTTATTGTAAAGGAAACTTTACATGTAAATTGCATATATGATAAAAG] [+] EMBL AK109210 [TCGCTGCAGCGGAGCAATCGCCCATCGCCGTCGTACTCCCCATCTCGTCGCTACCGCCGTCCCCACCGCACCCTCCCCCTTCACCGCTGGCGGTGAAACCAGCCGCCGCCGTCCGAGGAGGTCTGTCCTCTCTCTCGCGCGCGGTCTCATCTCTTCCTGCTCTCTCTCGTTCCTCTCTTATCCTCACGCGCAAGAGAGGGAGAGCGGAGATGGCGCGCGGCGACTGGGTGGCGGCCGAGCGCGGCGGCGCGGCCGGGCGGCTTGGCGTGGCGTCGACGTCGTGTGGCGGCATGGCGATGGGAGCAGTGGAGAAGTGGTGCATCGGTGGATGGGGAAGCAGAGGAGGGACCACAAGGCGGCGGCCGACTCGGTCGAGGCGACGCGGCCGCTGGGGTGATCGCACGTCGGCGCTCGGCCCGGCGCCATGGTGGCTTGGGTCGGGCGGAGACGGCGATGCCGCGCATATGGCGTGGGTGACGGCGCGGCCACTCGGCGGGGAGGCCAAGACGTCGGCGAGGCAGCGGCCGGGCGTGTCGGCGCAGGCGACGGCGCGGCGGCAACCAGACTCGGCTGCGCGGCGGCGCGGCCGA ] [+] EMBL AK106939 [ GAGCAATCGCCCATCGCCGTCGTACTCCCCATCTCGTCGCTACCGCCGTCCCCACCGCACCCTCCCCCTTCACCGCTGGCGGTGAAACCAGCCGCCGCCGTCCGAGGAGGTCTGTCCTCTCTCTCGCGCGCGGTCTCATCTCTTCCTGCTCTCTCTCGTTCCTCTCTTATCCTCACGCGCAAGAGAGGGAGAGCGGAGATGGCGCGCGGCGACTGGGTGGCGGCCGAGCGCGGCGGCGCGGCCGGGCGGCTTGGCGTGGCGTCGACGTCGTGTGGCGGCATGGCGATGGGAGCAGTGGAGAAGTGGTGCATCGGTGGATGGGGAAGCAGAGGAGGGACCACAAGGCGGCGGCCGACTCGGTCGAGACGACGCGGCCGCTGGGGTGATCGCACGTCGGCGCTCGGCCCGGCGCCATGGTGGCTTGGGTCGGGCGGAGACGGCGATGCCGCGCATATGGCGTGGGTGACGGCGCGGCCACTCGGCGGGGAGGCCAAGACGTCGGCGAGGCAGCGGCCGGGCGTGTCGGCGCAGGCGACGGCGCGGCGGCAACCAGACTCGGCTGCGCGGCGGCGCGGCCGAGGCAGACCTTAAAAGAAAAATAAAAAAAAACAACCTGCCGCCCGCGCCGTGCAACCTGGAGGATCGAGGCGGGTTGTTCTGGTCGATTTCGGCCACGACGGGGGCTGGGCAGTTCCAGGAGGCGCTTCGCATGACGGGCTCGGCAGGGGGCAGCGCACTCCGAGTCCACGGCGTCACCACCATGAGCAGGAACCCCGACGGCTGTCCTCCATGGCTCATACGACTGCACCGTCCGGCCTCCAACACAACGGCTGTCCTCCTAGAGTCCCGGTGAACGCAGATCGACCTCATGGGTGACTTACAGGAGCTTCCCGGACCTACGGCAACAGTGATCGAGGAACTCTGCTGCTCGAAATTAGGAGATGGGATTCTAGAATCCATTGCTTACATGATAATGAAGGTTTGGTGATTACCTGAAATTTGGAAGCAGTATTGATTTTCTACTAGAAGATTGAAAGGAGGTACATGCCAGATCCACTATTCATTGCGGTGCTATTGTTAATTTATAGGTTCAAATTATTCAAGCTGTTGGTCTGAATTTATTCCCATACATCAGTTCAAGCTGTTGTGGATCCTAAGAACCAAGCTGGATTTATTGGACAACATCCTATTACGAGATCGCAAGAGATTCAGGTAGACTCTACGGGTGATTGCTAAGCACCAAGTAAAGAATTAATACAAAGGAAATTGTTAAGTCTGTCTTCTGTACTGCTAGAAGTTACAGGTGACGTACACGATTGTTTGTAGAAGAGGAAACTGAGGAAGGCTTCTATGCATAACGTGTCCATACCTTACTCAATTGTTTGGTGTCCATCAAAGAAATGTGCCAGCACGGAAGTCAGTAGATTTCTAGGCTTGCATATGTAGTAACGACAATCATGTATTTAGGTGCACTCGTCTATTATTATGCACTCATGAAATTTGGTTTGCTGGGGTGTAACCTCTGATCTCTCTTTACTTTTGAGCTTAATATATAAGTTGAATTAGAGTTATTGTAAAGGAAACTTTACATGTAAATTGCATATATGATAAAAG] [+] EMBL CB630160 [ AACCCCCCATCGCCGTCGTACTCCCCATCTCGTCGCTACCGCCGTCCCCACCGCACCCTCCCCCTTCACCGCTGGCGGTGAAACCAGCCGCCGCCGTCCGAGGAGGTCTGTCCTCTCTCTCGCGCGCGGTCTCATCTCTTCCTGCTCTCTCTCGTTCCTCTCTTATCCTCACGCGCAAGAGAGGGAGAGCGGAGATGGCGCGCGGCGACTGGGTGGCGGCCGAGCGCGGCGGCGCGGCCGGGCGGCTTGGCGTGGCGTCGACGTCGTGTGGCGGCATGGCGATGGGAGCAGTGGAAAAGTGGTGCATCGGTGGATGGGGAAGCAGAGGAGGGACCACAAGGCGGCGGCCGACTCGGTCGAGACGACGCGGCCGCTGGGGTGATCGCACGTCGGCGCTCGGCCCGGCGCCATGGTGGCTTGGGTCGGGCGGAGACGGCGATGCCGCGCATATGGCGTGGGAGACGGCGCGGCCACTCGGCGGGGAGGCCAAGACGTCGGCGAGGCAGCG ] consensusID : consensus_9990#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 717 fasta sequence [AATAACATCCTGGGATGAAGAATTTTATAGGAGGTTGATTAGATACCTTTTTATGCCACTTATTGTAAATTGATAAGTCGTGTTAGATTTAAAGATTGTCAAGACTGACATCCCAATCACCAGAAGATTGATTGAATTTAACTGTGGTTCTATGAAATTTGATGTTATAATTATTTCAGATATTATTGTGATTCTCTGCAAGATTTTGTTGTTTTAGTCACAACCTATCTAAATTTTATTTCTTCTACATTTGTTCATGATCTTTCGTTGAACTGTGATGCCCATGAATTTTGTTTTAGATCGTAAGAGATTCAGGTAGACTCTACGGGTGATTGCTAAGCACCAAGTAAAGAATTAATACAAAGGAAATTGTTAAGTCTGTCTTCTGTACTGCTAGAAGTTACAGGTGACGTACACGATTGTTTGTAGAAGAGGAAACTGAGGAAGGCTTCTATGCATAACGTGTCCATACCTTACTCAATTGTTTGGTGTCCATCAAAGAAATGTGCCAGCACGGAAGTCAGTAGATTTCTAGGCTTGCATATGTAGTAACGACAATCATGTATTTAGGTGCACTCGTCTATTATTATGCACTCATGAAATTTGGTTTGCTGGGGTGTAACCTCGGATCTCTCTTTACTTTTGAGCTTAATATATAAGTTGAATTAGAGTTATTGTAAAGGAAACTTTTTTTAGGGTTGCATATATGATAAAAGA] [-] EMBL CB630161 [AATAACATCCTGGGATGAAGAATTTTATAGGAGGTTGATTAGATACCTTTTTATGCCACTTATTGTAAATTGATAAGTCGTGTTAGATTTAAAGATTGTCAAGACTGACATCCCAATCACCAGAAGATTGATTGAATTTAACTGTGGTTCTATGAAATTTGATGTTATAATTATTTCAGATATTATTGTGATTCTCTGCAAGATTTTGTTGTTTTAGTCACAACCTATCTAAATTTTATTTCTTCTACATTTGTTCATGATCTTTCGTTGAACTGTGATGCCCATGAATTTTGTTTTAGATCGTAAGAGATTCAGGTAGACTCTACGGGTGATTGCTAAGCACCAAGTAAAGAATTAATACAAAGGAAATTGTTAAGTCTGTCTTCTGTACTGCTAGAAGTTACAGGTGACGTACACGATTGTTTGTAGAAGAGGAAACTGAGGAAGGCTTCTATGCATAACGTGTCCATACCTTACTCAATTGTTTGGTGTCCATCAAAGAAATGTGCCAGCACGGAAGTCAGTAGATTTCTAGGCTTGCATATGTAGTAACGACAATCATGTATTTAGGTGCACTCGTCTATTATTATGCACTCATGAAATTTGGTTTGCTGGGGTGTAACCTCGGATCTCTCTTTACTTTTGAGCTTAATATATAAGTTGAATTAGAGTTATTGTAAAGGAAACTTTTTTTAGGGTTGCATATATGATAAAAGA] consensusID : consensus_9990#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 621 fasta sequence [TCTTTTATCATATATGCAATTTACATGTAAAGTTTCCTTTACAATAACTCTAATTCAACTTATATATTAAGCTCAAAAGTAAAGAGAGATCAGAGGTTACACCCCAGCAAACCAAATTTCATGAGTGCATAATAATAGACGAGTGCACCTAAATACATGATTGTCGTTACTACATATGCAAGCCTAGAAATCTACTGACTTCCGTGCTGGCACATTTCTTTGATGGACACCAAACAATTGAGTAAGGTATGGACACGTTATGCATAGAAGCCTTCCTCAGTTTCCTCTTCTACAAACAATCGTGTACGTCACCTGTAACTTCTAGCAGTACAGAAGACAGACTTAACAATTTCCTTTGTATTAATTCTTTACTTGGTGCTTAGCAATCACCCGTAGAGTCTACCTGAATCTCTTGCGATCTCCGTAATAGGATGTTGTCCAATAATCCAGCTTGGTCNTTAGATCCACAACAGCTTGAACTGATGTTTNGGAATAAATCNAACCACAGCTTGAATATTTGACCTNTAATTACATACNCGCATGANATGGNTCTGNANTCCCCTTCACTCCATAAANCANCGCTCCATTCCGGTNNCCCACNNCTTTCNTTNCTGNCCNNCC] [+] EMBL BE229127 [TCTTTTATCATATATGCAATTTACATGTAAAGTTTCCTTTACAATAACTCTAATTCAACTTATATATTAAGCTCAAAAGTAAAGAGAGATCAGAGGTTACACCCCAGCAAACCAAATTTCATGAGTGCATAATAATAGACGAGTGCACCTAAATACATGATTGTCGTTACTACATATGCAAGCCTAGAAATCTACTGACTTCCGTGCTGGCACATTTCTTTGATGGACACCAAACAATTGAGTAAGGTATGGACACGTTATGCATAGAAGCCTTCCTCAGTTTCCTCTTCTACAAACAATCGTGTACGTCACCTGTAACTTCTAGCAGTACAGAAGACAGACTTAACAATTTCCTTTGTATTAATTCTTTACTTGGTGCTTAGCAATCACCCGTAGAGTCTACCTGAATCTCTTGCGATCTCCGTAATAGGATGTTGTCCAATAATCCAGCTTGGTCNTTAGATCCACAACAGCTTGAACTGATGTTTNGGAATAAATCNAACCACAGCTTGAATATTTGACCTNTAATTACATACNCGCATGANATGGNTCTGNANTCCCCTTCACTCCATAAANCANCGCTCCATTCCGGTNNCCCACNNCTTTCNTTNCTGNCCNNCC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9990#0 --------------CAATCGCCCATCGCCGTCGTACTCCCCATCTCGTCGCTACCGCCGT 46 consensus_9990#1 TCGCTGCAGCGGAGCAATCGCCCATCGCCGTCGTACTCCCCATCTCGTCGCTACCGCCGT 60 consensus_9990#2 ------------------------------------------------------------ consensus_9990#3 ------------------------------------------------------------ consensus_9990#0 CCCCACCGCACCCTCCCCCTTCACCGCTGGCGGTGAAACCAGCCGCCGCCGTCCGAGGAG 106 consensus_9990#1 CCCCACCGCACCCTCCCCCTTCACCGCTGGCGGTGAAACCAGCCGCCGCCGTCCGAGGAG 120 consensus_9990#2 ------------------------------------------------------------ consensus_9990#3 ------------------------------------------------------------ consensus_9990#0 GTTTGTCCTCTCTCTCGCGCGCGGTCTCATCTCTTCCTGCTCTCTCTCGTTCCTCTCTTA 166 consensus_9990#1 GTCTGTCCTCTCTCTCGCGCGCGGTCTCATCTCTTCCTGCTCTCTCTCGTTCCTCTCTTA 180 consensus_9990#2 ------------------------------------------------------------ consensus_9990#3 ------------------------------------------------------------ consensus_9990#0 TCCTCACGCGCAAGAGAGGGAGAGCGGAGATGGCGCGCGGCGACTGGGTGGCGGCCGAGC 226 consensus_9990#1 TCCTCACGCGCAAGAGAGGGAGAGCGGAGATGGCGCGCGGCGACTGGGTGGCGGCCGAGC 240 consensus_9990#2 ------------------------------------------------------------ consensus_9990#3 ------------------------------------------------------------ consensus_9990#0 GCGGCGGCGCGGCCGGGCGGCTTGGCGTGGCGTCGACGTCGTGTGGCGGCATGGCGATGG 286 consensus_9990#1 GCGGCGGCGCGGCCGGGCGGCTTGGCGTGGCGTCGACGTCGTGTGGCGGCATGGCGATGG 300 consensus_9990#2 ------------------------------------------------------------ consensus_9990#3 ------------------------------------------------------------ consensus_9990#0 GAGCAGTGGAGAAGTGGTGCATCGGTGGATGGGGAAGCAGAGGAGGGACCACAAGGCGGC 346 consensus_9990#1 GAGCAGTGGAGAAGTGGTGCATCGGTGGATGGGGAAGCAGAGGAGGGACCACAAGGCGGC 360 consensus_9990#2 ------------------------------------------------------------ consensus_9990#3 ------------------------------------------------------------ consensus_9990#0 GGCCGACTCGGTCGAGACGACGCGGCCGCTGGGGTGATCGCACGTCGGCGCTCGGCCCGG 406 consensus_9990#1 GGCCGACTCGGTCGAGACGACGCGGCCGCTGGGGTGATCGCACGTCGGCGCTCGGCCCGG 420 consensus_9990#2 ------------------------------------------------------------ consensus_9990#3 ------------------------------------------------------------ consensus_9990#0 CGCCATGGTGGCTTGGGTCGGGCGGAGACGGCGATGCCGCGCATATGGCGTGGGTGACGG 466 consensus_9990#1 CGCCATGGTGGCTTGGGTCGGGCGGAGACGGCGATGCCGCGCATATGGCGTGGGTGACGG 480 consensus_9990#2 ------------------------------------------------------------ consensus_9990#3 ------------------------------------------------------------ consensus_9990#0 CGCGGCCACTCGGCGGGGAGGCCAAGACGTCGGCGAGGCAGCGGCCGGGCGTGTCGGCGC 526 consensus_9990#1 CGCGGCCACTCGGCGGGGAGGCCAAGACGTCGGCGAGGCAGCGGCCGGGCGTGTCGGCGC 540 consensus_9990#2 ------------------------------------------------------------ consensus_9990#3 ------------------------------------------------------------ consensus_9990#0 AGGCGACGGCGCGGCGGCAACCAGACTCGGCTGCGCGGCGGCGCGGCCGAGGCAGACCTT 586 consensus_9990#1 AGGCGACGGCGCGGCGGCAACCAGACTCGGCTGCGCGGCGGCGCGGCCGAGGCAGACCTT 600 consensus_9990#2 ------------------------------------------------------------ consensus_9990#3 ------------------------------------------------------------ consensus_9990#0 AAAAGAAAAATAAAAAAAA-CAACCTGCCGCCCGCGCCGTGCAACCTGGAGGATCGAGGC 645 consensus_9990#1 AAAAGAAAAATAAAAAAAAACAACCTGCCGCCCGCGCCGTGCAACCTGGAGGATCGAGGC 660 consensus_9990#2 ------------------------------------------------------------ consensus_9990#3 ------------------------------------------------------------ consensus_9990#0 GGGTTGTTCTGGTCGATTTCGGCCACGACGGGGGCTGGGCAGTTCCAGGAGGCGCTTCGC 705 consensus_9990#1 GGGTTGTTCTGGTCGATTTCGGCCACGACGGGGGCTGGGCAGTTCCAGGAGGCGCTTCGC 720 consensus_9990#2 ------------------------------------------------------------ consensus_9990#3 ------------------------------------------------------------ consensus_9990#0 ATGACGGGCTCGGCAGGGGGCAGCGCACTCCGAGTCCACGGCGTCACCACCATGAGCAGG 765 consensus_9990#1 ATGACGGGCTCGGCAGGGGGCAGCGCACTCCGAGTCCACGGCGTCACCACCATGAGCAGG 780 consensus_9990#2 ------------------------------------------------------------ consensus_9990#3 ------------------------------------------------------------ consensus_9990#0 AACCCCGACGGCTGTCCTCCATGGCTCATACGACTGCACCGTCCGGCCTCCAACACAACG 825 consensus_9990#1 AACCCCGACGGCTGTCCTCCATGGCTCATACGACTGCACCGTCCGGCCTCCAACACAACG 840 consensus_9990#2 ------------------------------------------------------------ consensus_9990#3 ------------------------------------------------------------ consensus_9990#0 GCTGTCCTCCTAGAGTCCCGGTGAACGCAGATCGACCTCATGGGTGACTTACAGGAGCTT 885 consensus_9990#1 GCTGTCCTCCTAGAGTCCCGGTGAACGCAGATCGACCTCATGGGTGACTTACAGGAGCTT 900 consensus_9990#2 ------------------------------------------------------------ consensus_9990#3 ------------------------------------------------------------ consensus_9990#0 CCCGGACCTACGGCAACAGTGATCGAGGAACTCTGCTGCTCGAAATTAGGAGGTCTGTGT 945 consensus_9990#1 CCCGGACCTACGGCAACAGTGATCGAGGAACTCTGCTGCTCGAAATTAGGAGATGGGATT 960 consensus_9990#2 --------AATAACATCCTGGGATGAAGAATTTTATAG---GAGGTTGATTAGATACCTT 49 consensus_9990#3 ---------------------------------------------------------TCT 3 * consensus_9990#0 TTTGTTTTACCTGTTACGAATTTGCTAATTCTGGATTCTTTGCTTCCTCCCAAAGACGAA 1005 consensus_9990#1 CTAG---AATCCATTGCTTACATGATAATGAAGGTTTGGTGATTACCTGAAATTTGGAAG 1017 consensus_9990#2 TTTATGCCACTTATTGTAAAT-TGATAAGTCGTGTTAGATTTAAAGATTGTCAAGACTGA 108 consensus_9990#3 TTTATCATATATGCAATTTACATG-TAAAGTTTCCTTTACAATAACTCTAATTCAACTTA 62 * * * ** *** * consensus_9990#0 CACCACAAGATTTCCGTATATGCATGCTTGCGTAATA-ATATAGCATCAACACATGAACA 1064 consensus_9990#1 CAGTATTGATTTTCTACTAGAAGATTGAAAGGAGGTACATGCCAGATCCACTATTCATTG 1077 consensus_9990#2 CATCCCAA-----TCACCAGAAGATTGATTGAATTTAACTGTGGT-TCTATG---AAATT 159 consensus_9990#3 TATATTAA-------GCTCAAAAGTAAAGAGAGATCAGAGGTTACACCCCAG--CAAACC 113 * * * * * consensus_9990#0 CGATAATATAGTGTCAACCTGTTTCATATGTGCTCTGAGCTTTCTATTTTAGCCCTTTCG 1124 consensus_9990#1 CGGTGCTAT--TGTTAATTT-------ATAGGTTCAAA-----TTATTCAAGCTGTTGGT 1123 consensus_9990#2 TGATGTTATA--ATTATTTC-------AGATATTATTGTGATTCTCTGCAAG--ATTTTG 208 consensus_9990#3 AAATTTCATG--AGTGCATAATAATAGACGAGTGCACCTAAATACATGATTGTCGTTACT 171 * ** * * * ** consensus_9990#0 CAGCCAGTTTGTGTTGAAACTATTAGTAATCAATCTGTTATATGATAACTCAGGAACTGC 1184 consensus_9990#1 CTG--AATTTATTCCCATAC-ATCAGT--TCAAGCTGTTGTG-GAT--CCTAAGAAC--C 1173 consensus_9990#2 TTGT---TTTAGTCACAACCTATCTAAATTTTATTTCTTCTACATTTGTTCATGATCTTT 265 consensus_9990#3 ACATATGCAAGCCTAGAAATCTACTGA-CTTCCGTGCTGGCACATTTCTTTGATGGACAC 230 * * * * consensus_9990#0 AGGTTGGGCCT---GAACTAAATTTT-TTGAGAAACCTTTTCTGTTCTACAGATGGG-AT 1239 consensus_9990#1 AAGCTGGATTTATTGGACAACATCCTATTACGAGATCGCAAGAGATT--CAGGTAG--AC 1229 consensus_9990#2 CGTTGAACTGTGATGCCCATGAATTTTGTTTTAGATCGTAAGAGATT--CAGGTAG--AC 321 consensus_9990#3 CAAACAATTGAGTAAGGTATGGACACGTTATGCA--TAGAAGCCTTCCTCAGTTTCCTCT 288 * * *** * consensus_9990#0 TCTAGAATCCATTGC-TTACATGATAATGAAGGTTTGGTGATTACCTGAAATTTGGAAGC 1298 consensus_9990#1 TCTACGGGTGATTGC-TAAGCACCAAGTAAAGAATTAATA--CAAAGGAAATTGTTAAGT 1286 consensus_9990#2 TCTACGGGTGATTGC-TAAGCACCAAGTAAAGAATTAATA--CAAAGGAAATTGTTAAGT 378 consensus_9990#3 TCTACAAACAATCGTGTACGTCACCTGTAACTTCTAGCAGTACAGAAGACAGACTTAACA 348 **** ** * * * * * * ** * ** consensus_9990#0 AGGTACCTACCGATAATCGTCCATGTTATACTGTTAAATTTAAATGCATCCCTTGATAGC 1358 consensus_9990#1 CTGT--CTTCTG-TACTGCTAGAAGTTACA-------GGTGACGTACA-CGATTGTTTGT 1335 consensus_9990#2 CTGT--CTTCTG-TACTGCTAGAAGTTACA-------GGTGACGTACA-CGATTGTTTGT 427 consensus_9990#3 ATTTCCTTTGTATTAATTCT-----TTACT---------TGGTGCTTAGCAATCACCCGT 394 * * ** * * *** * * * * * consensus_9990#0 AAA----AAAAAAAAGAAAAAACTATACTGTTACTACAAGATTG-AGTTA-TGCACCGCT 1412 consensus_9990#1 AGA----AGAGGAAACTGAGGA--AGGCTTCTA-TGCATAACGT-GTCCA-TACCTTACT 1386 consensus_9990#2 AGA----AGAGGAAACTGAGGA--AGGCTTCTA-TGCATAACGT-GTCCA-TACCTTACT 478 consensus_9990#3 AGAGTCTACCTGAATCTCTTGC---GATCTCCGTAATAGGATGTTGTCCAATAATCCAGC 451 * * * ** * * * * consensus_9990#0 AACAACAAATATGAGTCATTAGAGTGAAAGAATGTTCTTAGACTAGAAGTTGTTTCAAGG 1472 consensus_9990#1 --CAATTGTTTGGTGTCCATCAAAGAAATGTGCCAGCACGGAAGTCAGTAGATTTCTAGG 1444 consensus_9990#2 --CAATTGTTTGGTGTCCATCAAAGAAATGTGCCAGCACGGAAGTCAGTAGATTTCTAGG 536 consensus_9990#3 T-TGGTCNTTAGATCCACAACAGCTTGAACTGATGTTTNGGAATAAATCNAACCAC--AG 508 * * ** * * * consensus_9990#0 GTGGAGATTGTTAGTAAAAACGTCCAGAGCCATCCTTCGGATAATTTATCCTTATTGATA 1532 consensus_9990#1 CTTGCATATGT-AGTAACGACAATCATGTATTTAGGTGCACTCGTCTATTATTATGCACT 1503 consensus_9990#2 CTTGCATATGT-AGTAACGACAATCATGTATTTAGGTGCACTCGTCTATTATTATGCACT 595 consensus_9990#3 CTTGAATATTT---GACCTNTAATTACATACNCGCATGANATGGNTCTGNANTCCCC-TT 564 * * * * * * * * * consensus_9990#0 CTAAAAGTTGGATGATGTATTCACCTAGGTAGACCACTTTCTGATCACAAATTTTGCAAA 1592 consensus_9990#1 CATGAAATTTGGT-------TTGCTGGGGTG---TAACCTCTGATCTC--TCTTTACTTT 1551 consensus_9990#2 CATGAAATTTGGT-------TTGCTGGGGTG---TAACCTCGGATCTC--TCTTTACTTT 643 consensus_9990#3 CACTCCATAAANC------ANCGCTCCATTC---CGGTNNCCCACNNCTTTCNTTNCTGN 615 * * * * * * * ** * consensus_9990#0 TGGAACTATGAATGTGCAGAAATTAGATCTAAATTGCCGTGGCATATAGGT-ACTTCTAA 1651 consensus_9990#1 TGAGCTTA-----ATATATAAGTTGAATTAGAGTTATTGTAAAGGAAACTTTACATGTAA 1606 consensus_9990#2 TGAGCTTA-----ATATATAAGTTGAATTAGAGTTATTGTAAAGGAAACTT-TTTTTAGG 697 consensus_9990#3 CCNNCC------------------------------------------------------ 621 consensus_9990#0 GTGGCTCTGCTTTTAAAACATGCTACGTGAATGGAGCCATCCTTGTATTATACTA 1706 consensus_9990#1 ATTGCATATATGATAAAAG------------------------------------ 1625 consensus_9990#2 GTTGCATATATGATAAAAGA----------------------------------- 717 consensus_9990#3 ------------------------------------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||