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Schistosoma mansoni
cluster # 10021 cluster # 10021       Sequences # 13       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10021#0 length = 1533 sequences # 12  
consensus_10021#1 length = 516 sequences # 1  

consensusID : consensus_10021#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 12
consensus length = 1533
fasta sequence
                              [GAGCCATTATTCGGCACGACGGCCGGTATCAGTGAAGTCTGCTGTGTATGTTTAGATTATTTTTCAACTCATCTTTTTAAACTTGTCCAACGTGAACAACGTTCAAGTCGTACAACTAATAATAATAATTATAATAATAATTCATTATATCTAATTGATGTGAATAATTCGAATTTAATGAATGGAGACAATCATGATGGTAATAGTAATGATAATAATAATACCAATCACTTGTTAGCACCACATATATTATTAGATCAAGGAGGTGCATCCAATCATGCTGTATGGTCTACACGTGCTACATCAGCATCATCAAATCTATTAAATTTATTAATGCCAACAACATCAAATTCTCAAAGTTTAGAAATGATTTCAGGTGTAAATCTACTACGACGTATACTTATTACATTACTTAGTTCAGTAATACAAGAAGAATGTCGTTGCCAATGGTCTATGTCTAGACCGTTATTACCATTAATTTTATTGAATCAACAAGTTTACTCAGAACTTATCTACCTTCAAGCATAGCTTGAGCGACTTCCTCAAAAAGACGAGTGCAAAACCTGATGACACATTTAGTCAAACAGAAGGCAACAATTACGAGACATATCTTTGTTTAGGTAGTGCGATAGCACAAGCAGGCGAACAGTTGCTGAATGTGTAGGAACTCAAGATAAACTATTTTGTACAATATTTTGTAATTAT-TGAAATAAATAAATTGTTTAACGTCCAAAACCAATGATGTTAACACTCAGTAGCTACCTCTGGTCGATTTTTCTCCTACTATTCAGGGCCATAACCTTGGGATTCATCCAGATATCCCAGATATAACGTGGGCTCTTCTGAGATACAGCAG-TCAGCAATTCTTGTTG-AAGTCGGCGTTTAGTCCTCGTTCTACTAGTAATTGCA-TTGTATGATTATACATATCGTCATCGAATAGATCAGTATATACGAAA-TAGCCTGGGATGCGTTCCACTTCAACTGAATCCACGGAATAAGTGGGAAGATTATTTGACTCATCTTCAGAAAGTTGTTTATCAGCGTCGTGACCTGGGAGACTGCAGTTGAAAACCAGACTTCGACCACTAGGTT-TTGTGAGTTTGATACGCAAATCAGGATGTGCTTCTAAGG-GGGCATCATCCTCCATCTTTTCTGGAGCACTCACATCATCCTCAGGAATGCTAGGAGAAACACTACCAGCCAAATTAATCTCTACATCGACAGAAAC-TCCATC-TTGATATTC-TTTGCGTATAACGATATCACATCCATCGGTTTTTACTACTTTGAACCCTTCAGGAGGGTTGCAGAAGAAAGCGTTTGCCTTTTCTTGTTTGATCTCATTGGTCAAAAA-CTGGTTGAGCTGACGGTCAACTTGAGATGAAGAGAACCAAGTCGAAGTAGTAAGATGTTTAGTAGTACTTGGTTTACTTAAAACCTGGGTTCCTTTGTTTGCAAATGTCAAGCGAGCACCGAGCAACACACGAGCAACAAGTCTAGACATTTCACGCC-CCTCGTGCCG-ATT-TTGGCTGCGAG]

[+] EMBL CD081720             [GAGCCATTATTCGGCACGACGGCCGGTATCAGTGAAGTCTGCTGTGTATGTTTAGATTATTTTTCAACTCATCTTTTTAAACTTGTCCAACGTGAACAACGTTCAAGTCGTACAACTAATAATAATAATTATAATAATAATTCATTATATCTAATTGATGTGAATAATTCGAATTTAATGAATGGAGACAATCATGATGGTAATAGTAATGATAATAATAATACCAATCACTTGTTAGCACCACATATATTATTAGATCAAGGAGGTGCATCCAATCATGCTGTATGGTCTACACGTGCTACATCAGCATCATCAAATCTATTAAATTTATTAATGCCAACAACATCAAATTCTCAAAGTTTAGAAATGATTTCAGGTGTAAATCTACTACGACGTATACTTATTACATTACTTAGTTCAGTAATACAAGAAGAATGTCGTTGCCAATGGTCTATGTCTAGACCGTTATTACCATTAATTTTATTGAATCAACAAGTTTACTCAGAACTTATCTACCTTCAAGCATAGCTTGAGCGACTTCCTCAAAAAGACGAGTGCAAAACCTGATGACACATTTAGTCAAACAGAAGGCAACAATTACGAGACATATCTTTGTTTAGGTAGTGCGATAGCACAAGCAGGCGAACAGTTGCTGAATGTGTAGGAACTCAAGATAAACTATTTTGTACAATATTTTGTAATTAT TGAAATAAATAAATT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CD069581             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   GAACAGTTGCTGAATGTGTAGGAACTCAAGATAAACTATTTTGGACCATATTTTGGAATTATGTGAAATAAATAAATTGTTTAACGTCCAAAACCAATGATGTTAACACTCAGTAGCTACCTCTGGTCGATTTTTCTCCTACTATTCAGGGCCATAACCTTGGGATTCATCCAGATATCCCAGATATAACGTGGGCTCTTCTGAGATACAGCAG TCAGCAATTCATGTTG AAGTCGGCGGTTAGTCCTCGTTGTACTAGTAATTGCA TTGTATGATTATACATATCGTCATCGCATAGATCAGTATATACGAAACTAGCCTGGGATGCGTTCCACTTCAACTGAATCCACGGTATAAGTGGGAAGATTATTTGACTCATCTTCAGAAAGTTGTTTATCAGCGTCGTGACCTGGGAGACTGCAGTTGCAAACCAGACTTCGACCAGTAGGTTATTGTGAGTTTGATACGC AATCAGGATGTGCTTCTAAGGAGGGCATCATCCTCC                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CD073254             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TTTGTAATTAT TGAAATAAATAAATTGTTTAACG ACAAATGCAATGATTTTAACAAT TGTAGCTACGTTGGGGTGGTTTTTCTCAAACTATTCTTTGCAATAATTTTGGAATTCATCCAGAAATCTTAAATATAACTTGTGCTCTTCTGAGGTACAGAAGTTTTGCAATTCTTGTTGAAAGTCGGCGTTTAGTCCTCGTTCTACTAGTAATTGCA TTGTATGATTATACATATCGTCATCGAATAGATCAGTATATACGAAA TAGCCTGGGATGCGTTCCACTTCAACTGAATCCACGGAATAAGTGGGAAGATTATTTGACTCATCTTCAGAAAGTTGTTTATCAGCGTCGTGACCTGGGAGACTGCAGTTGAAAACCAGACTTCGACCACTAGGTT TTGTGAGTTTGATACGCAAATCAGGATGTGCTTCTAAGG GGGCATCATCCTCCATCTTTTCTGGAGCACTCACATCATCCTCAGGAATGCTAGGAGAAACACTACCAGCCAAATTAATCTCTACATCGACAGAAAC TCCATC TTGATATTC TTTGCGTATAACGATATCACATCCATCGGTTTTTACTACTTTG                                                                                                                                                                                                                                                           ]
[-] EMBL CD080609             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                nTTCTTGTTGAAAGTCGGCGTTTAGTCCTCGTTCTACTAGTAA TGCATTTGTATGATTATACATATCGTCATCGAATAGATCAGTATATACGAAA TAGCCTGGGATGCGTTCCACTTCAACTGAATCCACGGAATAAGTGGGAAGATTATTTGACTCATCTTCAGAAAGTTGTTTATCAGCGTCGTGACCTGGGAGACTGCAGTTGAAAACCAGACTTCGACCACTAGGTT TTGTGAGTTTGATACGCAAATCAGGATGTGCTTCTAAGG GGGCATCATCCTCCATCTTTTCTGGAGCACTCACATCATCCTCAGGAATGCTAGGAGAAACACTACCAGCCAAATTAATCTCTACATCGACAGAAAC TCCATC TTGATATTC TTTGCGTATAACGATATCACATCCATCGGTTTTTACTACTTTGAACCCTTCAGGAGGGTTGCAGAAGAAAGCGTTTGCCTTTTCTTGTTTGATCTCATTGGTCAAAAA CTGGTTGAGCTGACGGTCAACTTGAGATGAAGAGAACCAAGTCGAAGTAGTAAGATGTTTAGTAGTACTTGGTTTACTTAAAACCTGGGTTCCTTTGTTTGCAAATGTCAAGCGAGCACCGAGCAACACACGAGCAACAAGTCTAGACATTTCACGCCGCCTCGTGCCGAATTNTTGGCTGCGAG]
[-] EMBL CD084366             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            AGTCGGCGTTTAGTCCTCGTTCTACTAGTAATTGCA TTGTATGATTATACATATCGTCATCGAATAGATCAGTATATACGAAA TAGCCTGGGATGCGTTCCACTTCAACTGAATCCACGGAATAAGTGGGAAGATTATTTGACTCATCTTCAGAAAGTTGTTTATCAGCGTCGTGACCTGGGAGACTGCAGTTGAAAACCAGACTTCGACCACTAGGTT TTGTGAGTTTGATACGCAAATCAGGATGTGCTTCTAAGG GGGCATCATCCTCCATCTTTTCTGGAGCACTCACATCATCCTCAGGAATGCTAGGAGAAACACTACCAGCCAAATTAATCTCTACATCGACAGAAAC TCCATC TTGATATTC TTTGCGTATAACGATATCACATCCATCGGTTTTTACTACTTTGAACCCTTCAGGAGGGTTGCAGAAGAAAGCGTTTGCCTTTTCTTGTTTGATCTCATTGGTCAAAAATCTGGTTGAGCTGACGGTCAACTTGAGATGAAGAGAACC AGTCGcctcg                                                                                                                                        ]
[-] EMBL CD078793             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        GTCCTCGTTCTACTAGTAATTGCA TGGTATGATTATACATATCGTCATCGAATAGATCAGTATATACGAAA TAGCCTGGGATGCGTTCCACTTCAACTGAATCCACGGAATAAGTGGGAAGATTATNTGACTCATCTTCAGAAAGTTGTTTATCAGCGTCGTGACCTGGGAGACTGCAGTTGAAAACCAGACTTCGACCACTAGGTT TTGTGAGTTTGATACGCAAATCAGGATGTGCTTCTAAGG GGGCATCATCCTCCATCTTTTCTGGAGCACTCACATCATCCTCAGGAATGCTAGGAGAAACACTACCAGCCAAATTAATCTCTACATCGACAGAAAC TCCATC TTGATATTC TTTGCGTATAACGATATCACATCCATCGGTTTTTACTACTTTGAACCCTTCAGGAGGGTTGCAGAAGAAAGCGTTTGCCTTTTCTTGTTTGATCTCATTGGTCAAAAA CTGGTTGAGCTGACGGTCAACTTGAGATGAAGAGAACCAAGTCGAAGTAGTAAGATGTTTAGTAGTACTTGGTTTACTTAAAACCTGGGTTCCTTTGTTTGCAAATGTCAAGCGAGCACCGAGCAACACACGAGCAACAAGTCTAGACATTTCACGCCgcaatt                     ]
[-] EMBL AI976570             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             CGTTCTACTAGTAATTGCA TTGTATGATTATACATATCGTCATCGAATAGATCAGTATATACGAAA TAGCCTGGGATGCGTTCCACTTCAACTGAATCCACGGAATAAGTGGGAAGATTATTTGACTCGTCTTCAGAAAGTTGTTTATCAGCGTCGTGGCCTGGGAGACTGCAGTTGAAAACCAAACTTCGACCACTAGGTT TTGTGAGTTTGATACGCAAATCAGGATGTGCTTCTAAGG GGGCATCATCCTCCATCTTTTCTGGAGCACTCACATCATCCTCAGGAATGCTAGGAGAAACACTACCAGCCAAATTAATCTCTACATCGACAGAAACTTCCATCTTTGATATTCTTTTGCGTATAACGATATCACATCCATCGGTTTTTACTACTTTGAACCCTTCAGGAGGGTTGCAGAAGAAAGCGTTTGCCTTTTCTTGTTTGATCTCATTGGTCAAAAA CTGGTTGAGCTGACGGTCAACTTGAGATGAAGAGAACCAAGTCGAAGTAGTAAGATGTTTAGTAGTACTTGGTTTACTTAAAACCTGGGTTCCTTTGTTTGCAAATGTCAAGCGAGCACCGAGCAACACACG                                                     ]
[-] EMBL CD069396             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               TCCACGGAATAAGTGGGAAGATTATTGGACTCGTCTTCAGAAAGTTGTTTATCAGCGTCGTGACCTGGGAGACTGCAGTTGAAAACCAGACTTCGACCACTAGGTT TTGTGAGTTTGATACGCAAATCAGGATGTGCTTCTAAGG GGGCATCATCCTCCATCTTGTCTGGAGCACTCACATCATCC                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL CD166994             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       CTGCAGTTGAAAACCAGACTTCGACCACTAGGTT TTGTGAGTTTGATACGCAAATCAGTATGTGCTTCTAAGG GGGCATCATCGTCCATCTGGTGTGGAGCACTCACATAATCTTCAGGAATGCTAGGAGAAACACGACCA                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CD139410             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GTTGAAAACCAAACTTCGACCACTAGGTT TTGTGAGTTTGATACGCAAATCAGGATGTGCTTCTAAGG GGGCATCATCCTCCATCTTTTCTGGAGCACTCACATCATCCTCAGGGATGCTAGGAGAAACACTACCAGCCAGATTAATCTCTACATCGACAGAAAC TCCATC TTGATATTC TTTGCGTATAACGATATCACATCCATCGGTTTTTACTACTTTGAACCCTTCAGGAGGGTTGCAGAAGAAAGCGTTTGCCTTTTCTTGTTTGATTTCATTGGTCAGAAA CTGGTTGAGCTGACGGTCAACTTGAGATGAAGAGAACCAAGTCGAAGTAGTAAGATGTTTAGTAGTACTTGGTTTACTTAAAACCTGGGTTCCTTTGTTTGCAAATGTCAAGCGAGCACCGAGCAAta                                                         ]
[+] EMBL CD147940             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             TTGAAAACCAGACTTCGACCACTAGGTT TTGTGAGTTTGATACGCAAATCAGGATGTGCTTCTAAGG GGGCATCATCCTCCATCTTTTCTGGAGCACACACATCATCCTCAGGAATGCTAGGAGAAACACTACCAGCCAAATTAATCTCTACATCGACAGAAAC TCCATC TTGATATTC TTTGCGTATAACGATATCACATCCATCGGTTTTTACTACTTTGAACCCTTCAGGAGGGTTGCAGAAGAAAGCGTTTGCCTTTTCTTGTTTGATCTCATTGGTCAAAAA CTGGTTGAGCTGACGGACAACTTGAGATGAAGAGAACCAAGTCGAAGTAGTAAGATGTTTAGTAGTACTTGGTTTACTTAAAACCTGGGTTCCTTTGTTTGCAAATGTCAAGCGAGCACCGAGCAACACACGAGCAACAAGTCTAGACATTTC                                ]
[-] EMBL CD077857             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           AAACACTACCAGCCNAATTAATCTCTACATCGACAGAAAC TCCATC TTGATATTC TTTGCGTATAACGATATCACATCCATCGGTTTTTACTACTTTGAACCCTTCAGGAGGGTTGCAGAAGAAAGCGTTTGCCTTTTCTTGTTTGATCTCATTGGTCAAAAA CTGGTTGAGCTGACGGTCAACTTGAGATGAAGAGAACCAAGTCGAAGTAGTAAGATGTTTAGTAGTACTTGGTTTACTTAAAACCTGGGTTCCTTTGTTTGCAAATGTCAAGCGAGCACCGAGCAACACACGAGCAACAAGTCTAGACATTTCGCGCC CCTCGTGACG ATT CTGGCTG    ]


>consensus_10021#0 GAGCCATTATTCGGCACGACGGCCGGTATCAGTGAAGTCTGCTGTGTATGTTTAGATTAT TTTTCAACTCATCTTTTTAAACTTGTCCAACGTGAACAACGTTCAAGTCGTACAACTAAT AATAATAATTATAATAATAATTCATTATATCTAATTGATGTGAATAATTCGAATTTAATG AATGGAGACAATCATGATGGTAATAGTAATGATAATAATAATACCAATCACTTGTTAGCA CCACATATATTATTAGATCAAGGAGGTGCATCCAATCATGCTGTATGGTCTACACGTGCT ACATCAGCATCATCAAATCTATTAAATTTATTAATGCCAACAACATCAAATTCTCAAAGT TTAGAAATGATTTCAGGTGTAAATCTACTACGACGTATACTTATTACATTACTTAGTTCA GTAATACAAGAAGAATGTCGTTGCCAATGGTCTATGTCTAGACCGTTATTACCATTAATT TTATTGAATCAACAAGTTTACTCAGAACTTATCTACCTTCAAGCATAGCTTGAGCGACTT CCTCAAAAAGACGAGTGCAAAACCTGATGACACATTTAGTCAAACAGAAGGCAACAATTA CGAGACATATCTTTGTTTAGGTAGTGCGATAGCACAAGCAGGCGAACAGTTGCTGAATGT GTAGGAACTCAAGATAAACTATTTTGTACAATATTTTGTAATTATTGAAATAAATAAATT GTTTAACGTCCAAAACCAATGATGTTAACACTCAGTAGCTACCTCTGGTCGATTTTTCTC CTACTATTCAGGGCCATAACCTTGGGATTCATCCAGATATCCCAGATATAACGTGGGCTC TTCTGAGATACAGCAGTCAGCAATTCTTGTTGAAGTCGGCGTTTAGTCCTCGTTCTACTA GTAATTGCATTGTATGATTATACATATCGTCATCGAATAGATCAGTATATACGAAATAGC CTGGGATGCGTTCCACTTCAACTGAATCCACGGAATAAGTGGGAAGATTATTTGACTCAT CTTCAGAAAGTTGTTTATCAGCGTCGTGACCTGGGAGACTGCAGTTGAAAACCAGACTTC GACCACTAGGTTTTGTGAGTTTGATACGCAAATCAGGATGTGCTTCTAAGGGGGCATCAT CCTCCATCTTTTCTGGAGCACTCACATCATCCTCAGGAATGCTAGGAGAAACACTACCAG CCAAATTAATCTCTACATCGACAGAAACTCCATCTTGATATTCTTTGCGTATAACGATAT CACATCCATCGGTTTTTACTACTTTGAACCCTTCAGGAGGGTTGCAGAAGAAAGCGTTTG CCTTTTCTTGTTTGATCTCATTGGTCAAAAACTGGTTGAGCTGACGGTCAACTTGAGATG AAGAGAACCAAGTCGAAGTAGTAAGATGTTTAGTAGTACTTGGTTTACTTAAAACCTGGG TTCCTTTGTTTGCAAATGTCAAGCGAGCACCGAGCAACACACGAGCAACAAGTCTAGACA TTTCACGCCCCTCGTGCCGATTTTGGCTGCGAG



consensusID : consensus_10021#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 516
fasta sequence
                              [TTGTAATTATTGAAATAAATAAATTGTTTAACGACAAATGCAATGATTTTAACAATTGTAGCTACGTTGGGGTGGTTTTTCTCAAACTATTCTTTGCAATAATTTTGGAATTCATCCAGAAATCTTAGATATAACTTGTGCTCTTCTGAGGTACAGAAGTTTTGCAATTCTTGTTGAAAGTCGGCGTTTAGTCCTCGTTCTACTAGTAATTGCATTGTATGATTATACATATCCTAAGATAAAGAAAAAGAGTTATTAAGCTAGTCAAAAGATATTAAACATTACTACTGAGTGCTACTTACGTCATCGAATAGATCAGTATATACGAAATAGCCTGGGATGCGTTCCACTTCAACTGAATCCACGGAATAAGTGGGAAGATTATTTGACTCATCTTCAGAAAGTTGTTTATCAGCGTCGTGACCTGGGAGACTGCAGTTGAAAACCAGACTTCGACCACTAGGTTTTGTGAGTTTGATACGCAAATCAGGATGTGCTTCTAAGGGGGCATCATCC]

[-] EMBL CD078463             [TTGTAATTATTGAAATAAATAAATTGTTTAACGACAAATGCAATGATTTTAACAATTGTAGCTACGTTGGGGTGGTTTTTCTCAAACTATTCTTTGCAATAATTTTGGAATTCATCCAGAAATCTTAGATATAACTTGTGCTCTTCTGAGGTACAGAAGTTTTGCAATTCTTGTTGAAAGTCGGCGTTTAGTCCTCGTTCTACTAGTAATTGCATTGTATGATTATACATATCCTAAGATAAAGAAAAAGAGTTATTAAGCTAGTCAAAAGATATTAAACATTACTACTGAGTGCTACTTACGTCATCGAATAGATCAGTATATACGAAATAGCCTGGGATGCGTTCCACTTCAACTGAATCCACGGAATAAGTGGGAAGATTATTTGACTCATCTTCAGAAAGTTGTTTATCAGCGTCGTGACCTGGGAGACTGCAGTTGAAAACCAGACTTCGACCACTAGGTTTTGTGAGTTTGATACGCAAATCAGGATGTGCTTCTAAGGGGGCATCATCC]


>consensus_10021#1 TTGTAATTATTGAAATAAATAAATTGTTTAACGACAAATGCAATGATTTTAACAATTGTA GCTACGTTGGGGTGGTTTTTCTCAAACTATTCTTTGCAATAATTTTGGAATTCATCCAGA AATCTTAGATATAACTTGTGCTCTTCTGAGGTACAGAAGTTTTGCAATTCTTGTTGAAAG TCGGCGTTTAGTCCTCGTTCTACTAGTAATTGCATTGTATGATTATACATATCCTAAGAT AAAGAAAAAGAGTTATTAAGCTAGTCAAAAGATATTAAACATTACTACTGAGTGCTACTT ACGTCATCGAATAGATCAGTATATACGAAATAGCCTGGGATGCGTTCCACTTCAACTGAA TCCACGGAATAAGTGGGAAGATTATTTGACTCATCTTCAGAAAGTTGTTTATCAGCGTCG TGACCTGGGAGACTGCAGTTGAAAACCAGACTTCGACCACTAGGTTTTGTGAGTTTGATA CGCAAATCAGGATGTGCTTCTAAGGGGGCATCATCC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10021#0      GAGCCATTATTCGGCACGACGGCCGGTATCAGTGAAGTCTGCTGTGTATGTTTAGATTAT 60
consensus_10021#1      ------------------------------------------------------------
                                                                                   

consensus_10021#0      TTTTCAACTCATCTTTTTAAACTTGTCCAACGTGAACAACGTTCAAGTCGTACAACTAAT 120
consensus_10021#1      ------------------------------------------------------------
                                                                                   

consensus_10021#0      AATAATAATTATAATAATAATTCATTATATCTAATTGATGTGAATAATTCGAATTTAATG 180
consensus_10021#1      ------------------------------------------------------------
                                                                                   

consensus_10021#0      AATGGAGACAATCATGATGGTAATAGTAATGATAATAATAATACCAATCACTTGTTAGCA 240
consensus_10021#1      ------------------------------------------------------------
                                                                                   

consensus_10021#0      CCACATATATTATTAGATCAAGGAGGTGCATCCAATCATGCTGTATGGTCTACACGTGCT 300
consensus_10021#1      ------------------------------------------------------------
                                                                                   

consensus_10021#0      ACATCAGCATCATCAAATCTATTAAATTTATTAATGCCAACAACATCAAATTCTCAAAGT 360
consensus_10021#1      ------------------------------------------------------------
                                                                                   

consensus_10021#0      TTAGAAATGATTTCAGGTGTAAATCTACTACGACGTATACTTATTACATTACTTAGTTCA 420
consensus_10021#1      ------------------------------------------------------------
                                                                                   

consensus_10021#0      GTAATACAAGAAGAATGTCGTTGCCAATGGTCTATGTCTAGACCGTTATTACCATTAATT 480
consensus_10021#1      ------------------------------------------------------------
                                                                                   

consensus_10021#0      TTATTGAATCAACAAGTTTACTCAGAACTTATCTACCTTCAAGCATAGCTTGAGCGACTT 540
consensus_10021#1      ------------------------------------------------------------
                                                                                   

consensus_10021#0      CCTCAAAAAGACGAGTGCAAAACCTGATGACACATTTAGTCAAACAGAAGGCAACAATTA 600
consensus_10021#1      ------------------------------------------------------------
                                                                                   

consensus_10021#0      CGAGACATATCTTTGTTTAGGTAGTGCGATAGCACAAGCAGGCGAACAGTTGCTGAATGT 660
consensus_10021#1      ------------------------------------------------------------
                                                                                   

consensus_10021#0      GTAGGAACTCAAGATAAACTATTTTGTACAATATTTTGTAATTATTGAAATAAATAAATT 720
consensus_10021#1      -----------------------------------TTGTAATTATTGAAATAAATAAATT 25
                                                          *************************

consensus_10021#0      GTTTAACGTCCAAAACCAATGATGTTAACACTCAGTAGCTACCTCTGGTCGATTTTTCTC 780
consensus_10021#1      GTTTAACGAC-AAATGCAATGATTTTAACAATT-GTAGCTACGTTGGGGTGGTTTTTCTC 83
                       ******** * ***  ******* ****** *  ******** *  **  * ********

consensus_10021#0      CTACTATTCAGGGCCATAACCTTGGGATTCATCCAGATATCCCAGATATAACGTGGGCTC 840
consensus_10021#1      AAACTATTCTTTGCAATAATTTTGGAATTCATCCAGAAATCTTAGATATAACTTGTGCTC 143
                         *******   ** ****  **** *********** ***  ********* ** ****

consensus_10021#0      TTCTGAGATACAGCAGTCA-GCAATTCTTGTTGAA-GTCGGCGTTTAGTCCTCGTTCTAC 898
consensus_10021#1      TTCTGAGGTACAGAAGTTTTGCAATTCTTGTTGAAAGTCGGCGTTTAGTCCTCGTTCTAC 203
                       ******* ***** ***   *************** ************************

consensus_10021#0      TAGTAATTGCATTGTATGATTATACATATC------------------------------ 928
consensus_10021#1      TAGTAATTGCATTGTATGATTATACATATCCTAAGATAAAGAAAAAGAGTTATTAAGCTA 263
                       ******************************                              

consensus_10021#0      ---------------------------------------GTCATCGAATAGATCAGTATA 949
consensus_10021#1      GTCAAAAGATATTAAACATTACTACTGAGTGCTACTTACGTCATCGAATAGATCAGTATA 323
                                                              *********************

consensus_10021#0      TACGAAATAGCCTGGGATGCGTTCCACTTCAACTGAATCCACGGAATAAGTGGGAAGATT 1009
consensus_10021#1      TACGAAATAGCCTGGGATGCGTTCCACTTCAACTGAATCCACGGAATAAGTGGGAAGATT 383
                       ************************************************************

consensus_10021#0      ATTTGACTCATCTTCAGAAAGTTGTTTATCAGCGTCGTGACCTGGGAGACTGCAGTTGAA 1069
consensus_10021#1      ATTTGACTCATCTTCAGAAAGTTGTTTATCAGCGTCGTGACCTGGGAGACTGCAGTTGAA 443
                       ************************************************************

consensus_10021#0      AACCAGACTTCGACCACTAGGTTTTGTGAGTTTGATACGCAAATCAGGATGTGCTTCTAA 1129
consensus_10021#1      AACCAGACTTCGACCACTAGGTTTTGTGAGTTTGATACGCAAATCAGGATGTGCTTCTAA 503
                       ************************************************************

consensus_10021#0      GGGGGCATCATCCTCCATCTTTTCTGGAGCACTCACATCATCCTCAGGAATGCTAGGAGA 1189
consensus_10021#1      GGGGGCATCATCC----------------------------------------------- 516
                       *************                                               

consensus_10021#0      AACACTACCAGCCAAATTAATCTCTACATCGACAGAAACTCCATCTTGATATTCTTTGCG 1249
consensus_10021#1      ------------------------------------------------------------
                                                                                   

consensus_10021#0      TATAACGATATCACATCCATCGGTTTTTACTACTTTGAACCCTTCAGGAGGGTTGCAGAA 1309
consensus_10021#1      ------------------------------------------------------------
                                                                                   

consensus_10021#0      GAAAGCGTTTGCCTTTTCTTGTTTGATCTCATTGGTCAAAAACTGGTTGAGCTGACGGTC 1369
consensus_10021#1      ------------------------------------------------------------
                                                                                   

consensus_10021#0      AACTTGAGATGAAGAGAACCAAGTCGAAGTAGTAAGATGTTTAGTAGTACTTGGTTTACT 1429
consensus_10021#1      ------------------------------------------------------------
                                                                                   

consensus_10021#0      TAAAACCTGGGTTCCTTTGTTTGCAAATGTCAAGCGAGCACCGAGCAACACACGAGCAAC 1489
consensus_10021#1      ------------------------------------------------------------
                                                                                   

consensus_10021#0      AAGTCTAGACATTTCACGCCCCTCGTGCCGATTTTGGCTGCGAG 1533
consensus_10021#1      --------------------------------------------
                                                                   




Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)