These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10040#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 13 consensus length = 214 fasta sequence [GCCATTGTGATGAATTGCTATTAGGAAATATTTCAGGTTGAATACTTTCAGTAACTGGTCTCTGTTGAAGCGGTATGTTAGAAGTGGAGATATCCTTATTCAAAAAATGATTCAAGTGTCTAACACTGTTAGTGGAATGTATTTCAGAACCAGGAGAATAAGGTGTTAGTAGAGCTGATCTCAAACGACAATTAGAATATTGAGATTTATTATT] [+] EMBL CD150320 [GCCATTGTGATGAATTGCTATTAGGAAATATTTCAGGTTGAATACTTTCAGTAACTGGTCTCTGTTGAAGCGGTATGTTAGAAGTGGAGATATCCTTATTCAAAAAATGATTCAAGTGTCTAACACTGTTAGTGGAATGTATTTCAGAACCAGGAGAATAAGGTGTTAGTAGAGCTGATCTCAAACGACAATTAGAATATTGAGATTTATTAT ] [+] EMBL CD150292 [ TATTAGGAAATATTTCAGGTTGAATACTTTCAGTAACTGGTCTCTGTTGAAGCGGTATGTTAGAAGTGGAGATATCCTTATTCAAAAAATGATTCAAGTGTCTAACACTGTTAGTGGAATGTATTTCAGAACCAGGAGAATAAGGTGTTAGTAGAGCTGATCTCAAACGACAATTAGAATATTGAGATTTATTAT ] [+] EMBL CD150309 [ TATTAGGAAATATTTCAGGTTGAATACTTTCAGTAACTGGTCTCTGTTGAAGCGGTATGTTAGAAGTGGAGATATCCTTATTCAAAAAATGATTCAAGTGTCTAACACTGTTAGTGGAATGTATTTCAGAACCAGGAGAATAAGGTGTTAGTAGAGCTGATCTCAAACGACAATTAGAATATTGAGATTTATTAT ] [+] EMBL CD150240 [ TATTAGGAAATATTTCAGGTTGAATACTTTCAGTAACTGGTCTCTGTTGAAGCGGTATGTTAGAAGTGGAGATATCCTTATTCAAAAAATGATTCAAGTGTCTAACACTGTTAGTGGAATGTATTTCAGAACCAGGAGAATAAGGTGTTAGTAGAGCTGATCTCAAACGACAATTAGAATATTGAGATTTATTAT ] [+] EMBL CD150288 [ TATTAGGAAATATTTCAGGTTGAATACTTTCAGTAACTGGTCTCTGTTGAAGCGGTATGTTAGAAGTGGAGATATCCTTATTCAAAAAATGATTCAAGTGTCTAACACTGTTAGTGGAATGTATTTCAGAACCAGGAGAATAAGGTGTTAGTAGAGCTGATCTCAAACGACAATTAGAATATTGAGATTTATTAT ] [+] EMBL CD150170 [ TATTAGGAAATATTTCAGGTTGAATACTTTCAGTAACTGGTCTCTGTTGAAGCGGTATGTTAGAAGTGGAGATATCCTTATTCAAAAAATGATTCAAGTGTCTAACACTGTTAGTGGAATGTATTTCAGAACCAGGAGAATAAGGTGTTAGTAGAGCTGATCTCAAACGACAATTAGAATATTGAGATTTATTAT ] [+] EMBL CD150223 [ TATTAGGAAATATTTCAGGTTGAATACTTTCAGTAACTGGTCTCTGTTGAAGCGGTATGTTAGAAGTGGAGATATCCTTATTCAAAAAATGATTCAAGTGTCTAACACTGTTAGTGGAATGTATTTCAGAACCAGGAGAATAAGGTGTTAGTAGAGCTGATCTCAAACGACAATTAGAATATTGAGATTTATTAT ] [-] EMBL CD150253 [ ATTAGGAAATATTTCAGGTTGAATACTTTCAGTAACTGGTCTCTGTTGAAGCGGTATGTTAGAAGTGGAGATATCCTTATTCAAGAAATGATTCAAGTGTCTAACACTGTTAGTGGAATGTATTTCAGAACCAGGAGAATAAGGTGTTAGTAGAGCTGATCTCAAACGACAATTAGAATATTGAGATTTATTATT] [-] EMBL CD150315 [ ATTAGGAAATATTTCAGGTTGGATACTTTCAGTAACTGGTCTCTGTTGAAGCGGTATGTTAGAAGTGGAGATATCCTTATTC AAAAATGATTCAAGTGTCTAACACTGTTAGTGGAATGTATTTCAGAACCAGGAGAATAAGGTGTTAGTAGAGCTGATCTCAAACGACAATTAGAATATTGAGATTTATTATT] [-] EMBL CD150164 [ TATGTTAGAAGTGGAGATATCCTTATTCAAAAAATGATTCAAGTGTCTAACACTGTTAGTGGAATGTATTTCAGAACCAGGAGAGTAAGGTGTTAGTAGAGCTGATCTCAAACGACAATTAGAATATTGAGATTTATTATT] [+] EMBL CD150154 [ AAAATGATTCAAGTGTCTAACACTGTTAGTGGAATGTATTTCAGAACCAGGAGAATAAGGTGTTAGTAGAGCTGATCCCAAACGACAATTAGAATATTGAGATTTATTAT ] [+] EMBL CD150147 [ AAAATGATTCAAGTGTCTAACACTGTTAGTGGAATGTATTTCAGAACCAGGAGAATAAGGTGTTAGTAGAGCTGATCCCAAACGACAATTAGAATATTGAGATTTATTAT ] [+] EMBL CD150155 [ AGTGTCTAACACTGTTAGTGGAATGTATTTCAGAACCAGGAGAATAAGGTGTTAGTAGAGCTGATCTCAAACGACAATTAGAATATTGAGATTTATTAT ] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||