These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10046#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 13 consensus length = 1337 fasta sequence [CCTACCATGCGTATGTCAACGCGAGATTCTAACAGGCATAAACGATTTAGTGCGTATGGTGTCATTGACACTGCAGCAGCTTTGGCTGGTAAAGAAGAAGCTCTACTAGCTGCTGTTTTAGCTCAAGAAGATGAAGAGAACGAAAGACCAGAAACTCTTTTAAAAGATTCCTCAGTCGTCCTCTCTGAACATGATACTGCAGCTGCGGAAGCTGTCGCTGCTGTAGCAAAAGAAGATGAAGTGATAGAGCAAAATAATAAGCTAAAATCTCAACCGGATATATCTGTAAACTCGACTGCAAATGAGCAGACAGCAGAACCTGTGATCATTACAAATGACACTGAAGAGGGTACAAAGAAAAAGCGTAAACGAATCACTGGACCTCAAACTCCTCGTATACACACTGAACCATCGGTGGTTAATATTGAGCCTGAAACCCCAACAACTACCCAGACGCTCACTCGTAAACGTACTGCCATGTCACCTAAGCCCCAAGAACCTAAAAGAAAACCAACTCCTACTCATTCTCCACTATCAGTGTCTGTTAATCTTACTCCAGTTGTTCTACCGACAACAGAAAGTAAACGAAGTCTCAGTCAACTTGGAGAGATTGTTGACTATGATCCTCTACATTTTATTCGGTGTCATGCACGAGACAACGACCCATTAGATTGC-GAAACTAAAGTATGGCGATGTGCATTCGAACCAAGTGTTAATAATCCAAGTAATGAAACATCAACTATTGTAGCTACATGCGGTGGAGAATGTGTTTGTCTTATTGATTGCAAATCAGGTCGTGTAATGAAACGT-TTCAAACACTTTGGTGAAGAATTTTACACGTTAGCATGGACGACTGTTGAAATGGCTGCAGGGCACAGAACAAATCTGTTGGCTGCCGCCGGTAAACTACGTGAAATTCGA-TTATTACATCCTGAACAATTAGTATGCTATGCTGAAATGCGCGG-CCATAAAGATGATGTTGCTTGTATGATATTTCATCCTGAAAAGCCTACTATCTTATTTTCTGGTGATTCTAAGTCTTGCATTTTAGTATGGGATA-TTGGTATACCTTCTGCACCAGAATATAAAAC-GCGTCATCAACTAC-TTATGCGTTTAGTA-TG-CCCTAGAGCTAATTTGAATCCTGTTTTAAATCTTGTATTNTT-AAAAAATACGATGCCCTTGTTGCTGNATGCGAAGATGGAATATTCTCATGGACATTGAAAGATTTTCGTAAAGAAAAAACTAGTGATGAAAAAGAAGCTGAACTTTGATTGAAAAGTCCACTCGTCGTGAACCATGTTTTGATGGTCTGGNCTCATTATCCGATGATTNATTGN] [+] EMBL CD093980 [CCTACCATGCGTATGTCAACGCGAGATTCTAACAGGCATAAACGATTTAGTGCGTATGGTGTCATTGACACTGCAGCAGCTTTGGCTGGTAAAGAAGAAGCTCTACTATCTGCTGTTTTAGCTCAAGAAGATGAAGAGAACGAAAGACCAGAAACTCTTTTAAAAGATTCCTCAGTCGTCCTCTCTGAACATGATACTGCAGCTGCGGAAGCTGTCGCTGCTGTAGCAAAAGAAGATGAAGTGATAGAGCAAAATAATAAGCTAAAATCTCAACCGGATATATCTGTAAACTCGACTGCAAATGAGCAGACAGCAGAACCTGTGATCATTACAAATGACACTGAAGAGGGTACAAAGAAAAAGCGTAAACGAATCACTGGACCTCAAACTCCTCGTATACACACTGAACCATCGGTGGTTAATATTGAGCCTGAAACCCCAACAACTACCCAGACGCTCACTCGTAAACGTACTGCCATGTCA ] [+] EMBL CD094072 [CCTACCATGCGTATGTCAACGCGAGATTCTAACAGGCATAAACGATTTAGTGCGTATGGTGTCATTGACACTGCAGCAGCTTTGGCTGGTAAAGAAGAAGCTCTACTAGCTGCTGTTTTAGCTCAAGAAGATGAAGAGAACGAAAGACCAGAAACTCTTTTAAAAGATTCCTCAGTCGTCCTCTCTGAACATGATACTGCAGCTGCGGAAGCTGTCGCTGCTGTAGCAAAAGAAGATGAAGTGATAGAGCAAAATAATAAGCTAAAATCTCAACCGGATATATCTGTAAACTCGACTGCAAATGAGCAGACAGCAGAACCTGTGATCATTACAAATGACACTGAAGAGGGTACAAAGAAAAAGCGTAAACGAATCACTGGACCTCAAACTCCTCGTATACACACTGGACCATCGGTGGTTAATATTGAGCCTGAAACCCCAACAACTACCCAGACGCTCACTCGTAAACGTACTGCCATGTCA ] [-] EMBL CD094018 [ CTACCATGCGTATGTCAACGCGAGATTCTAACAGGCATAAACGATTTAGTGCGTATGGTGTCATTGACACTGCAGCAGCTTTGGCTGGTAAAGAAGAAGCTCTACTAGCTGCTGCTTTAGCTCAAGAAGATGAAGAGAACGAAAGACCAGAAACTCTTTTAAAAGATTCCTCAGTCGTCCCCTCTGAACATGATACTGCAGCTGCGGAAGCTGTCGCTGCTGTAGCAAAAGAAGATGAAGTGATAGAGCAAAATAATAAGCT AAATCTCAACCGGATATATCTGTAAACTCGACTGCAAATGAGCAGACAGCAGAACCTGTGATCATTACAAATGACACTGAAGAGGGTACAAAGAAAAAGCGTAAACGAATCACTGGACCTCAAACTCCTCGTATACACACTGAACCATCGGTGGTTAATATTGAGCCTGAAACCCCAACAACTACCCAGACGCTCACTCGTAAACGTACTGCCATGTCAC ] [-] EMBL CD093988 [ CTACCATGCGTATGTCAACGCGAGATTCTAACAGGCATAAACGATTTAGTGCGTATGGTGTCATTGACACTGCAGCAGCTTTGGCTGGTAAAGAAGAAGCTCTACTAGCTGCTGTTTTAGCTCAAGAAGATGAAGAGAACGAAAGACCAGAAACTCTTTTAAAAGATTCCTCAGTCGTCCTCTCTGAACATGATACTGCAGCTGCGGAAGCTGTCGCTGCTGTAGCAAAAGAAGATGAAGTGATAGAGCAAAATAATAAGCTAAAATCTCAACCGGATATATCTGTAAACTCGACTGCAAATGAGCAGACAGCAGAACCTGTGATCGTTACAAATGACACTGAAGAGGGTACAAAGAAAAAGCGTAAACGAATCACTGGACCTCAAACTCCTCGTATACACACTGAACCATCGGTGGTTAATATTGAGCCTGAAACCCCAACAACTACCCAGACGCTCACTCGTAAACGTACTGCCATGTCAC ] [-] EMBL CD197660 [ GCTGTCGCTGCTGTACCAAAAGAAGATGAAGTGATAGAGCATAATAATAAGCTAAAATCTCAACCGGATATATCTGTAAACTCGACTGCAAATGAGCAGACAGCAGAACCTGTGATCATTACAAATGACACTGAAGAGGGTACAAAGAAAAAGCGTAAACGAATCACTGGACCTCAAACTCCTCGTATACACACTGAACCATCGGTGGTTAATATTGAGCCTGAAACCCCAACAACTACCCAGACGCTCACTCGTAAACGTACTGCCATGTCACCTAAGCCCCAAGAACCTAAAAGAAAACCAACTCCTACTCATTCTCCACTATCAGTGTCTGTTAATCTTACTCCAGTTGTTCTACCGACAACAGAAAGTAAACGAAGTCTCAGTCAACTTGGAGAGA ] [+] EMBL CD200387 [ GGTACAAAGAAAAAGCGTAAACGAATCACTGGACCTCAAACTCCTCGTATACACACTGAACCATCGGTGGTTAATATTGAGCCTGAAACCCCAATAACTACCCAGACGCTCACTCGTAAACGTACTGCCATGTCACCTAAGCCCCAAGAACCTAAAAGAAAACCAACTCCTACTCATTCTCCACTATCAGTGTCTGTTAATCTTACTCCAGTTGTTCTACCGACAACAGANAGTAAACGAAGTCTCAGTCAACTTGGAGAGATTGTTGACTATGATCCTCTACATTTTATTCGGTGTCATGCACGAGACAACGACCCATTAGATTGCNNGAACT AAGTATGGCGATGTGCA ] [-] EMBL CD119103 [ CCCAGGAACCTAAAAGAAAACCAACTCCTACTCATTCTCCACTATCAGTGTCTGTTAATCTTACTCCAGTTGTTCTACCGACAACAGAAAGTAAACGAAGTCTCAGTCAACTTGGAGAGATTGTTGACTATGATCCTCTACATTTTATTCGGTGTCATGCACGAGACAACGACCCATTAGATTGC GAAACTAAAGTATGGCGATGTGCATTCGAACCAAGTGTTAATAATCCAAGTAATGAAACATCAACTATTGTAGCTACATGCGGTGGAGAATGTGTTTGTCTTATTGATTGCAAATCAGGTCGTGTAATGAAACGT TTCAAACACTTTGGTGAAGAATTTTACACGTTAGCATGGACGACTGTTGAAATGGCTGCAGGGCACAGAACAAATCTGTTGGCTGCCGCCGGTAAACTACGTGAAATTCGA TTATTACATCCTGAACAATTAGTATGCTATGCTGAAATGCGCGG C ] [-] EMBL CD119085 [ CATGCACGAGACAACGACCCATTAGATTGC GAAACTAAAGTATGGCGATGTGCATTCGAACCAAGTGTTAATAATCCAAGTAATGAAACATCAACTATTGTAGCTACATCCGGTGGAGAATGTGTTTGTCTTATTGATTGCAAATCAGGTCGTGTAATGAAACGTCTTCAAACACTTTGGTGAAGAATTTTACACGTTAGCATGGACGACTGTTGAAATGGCTGCAGGGCACAGAACAAATCTGTTGGCTGCCGCCGGTAAACTACGTGAAATTCGATTTATTACATCCTGAACAATTAGTATGCTATGCTGAAATGCGCGG C ] [+] EMBL CD066899 [ CCATTAGATTGC GAAACTAAAGTATGGCGATGTGCATTCGAACCAAGTGTTAATAATCCAAGTAATGAAACATCAACTATTGTAGCTACATGCGGTGGAGAATGTGTTTGTCTTATTGATTGCAAATCAAGTCGTGTAATGAAACGT TTCAAACACTTTGGTGAAGAATTTTACACGTTATCATGGACGACTGATGAAATGGCTGCAGGGCACAAAACAAATCTGTTGGCTGCCGCCGGTAAACTACGTGAAATTCGA TTATTACATCCTGAACAATTAGTATGCTATGCTGAAATGCGCGG CCATAAAAATGATGTTGCTTGTATGATATTTCATCCTGAAAAGCCTACTATCTTATTTTCTGGTGATTCTAAGTCTTGCCTTTTAGTATGGGAAATTTGGTATACCTTCTGCGCCAGAATATAAAACGGCGTCATCAACTACTTTTTGGGTTTAGAATTGCCCCTAAAGC ] [+] EMBL CD066898 [ CCATTAGATTGC GAAACTAAAGTATGGCGATGTGCATTCGAACCAAGTGTTAATAATCCAAGTAATGAAACATCAACTATTGTAGCTACATGCGGTGGAGAATGTGTTTGTCTTATTGATTGCAAATCAAGTCGTGTAATGAAACGT TTCAAACACTTTGGTGAAGAATTTTACACGTTAACATGGACGACTGATGAAATGGCTGCAGGGCACAAAACAAATCTGTTGGCTTGCGCCGGTAAACTACGTGAAATTCGA TTATTACATCCTGAACAATTAATATGCTATGCTGAAATGCGCGGCCCATAAA AAGATGGTGCTTGTATGATATTTCATCCTGAAAAGCCTACTATCTTATTTTCTGGTGATTCTAAGTCTTGCATTTTAGTATGGGATA TTGGTATACCTTCTGCACCAGAATATAAAAC GCGTCATCAACTAC TTATGCGTTTAGTA TG CCCTAAAACT ] [+] EMBL CD125350 [ TTAGATTGC GAAACTAAAGTATGGCGATGTGCATTCGAACCAAGTGTTAATAATCCAAGTAATGAAACATCAACTATTGTAGCTACATGCGGTGGAGAATGTGTTTGTCTTATTGATTGCAAATCAGGTCGTGTAATGAAACGT TTCAAACACTTTGGTGAAGAATTTTACACGTTAGCATGGACGACTGTTGAAATGGCTGCAGGGCACAGAACAAATCTGTTGGCTGCCGCCGGTAAACTACGTGAAATTCGA TTATTACATCCTGAACAATTAGTATGCTATGCTGAAATGCGCGG CCATAAAGATGATGTTGCTTGTATGATATTTCATCCTGAAAAGCCTACTATCTTATTTTCTGGTGATTCTAAGTCTTGCATTNTAGTATGGGATA TTGGTATACCTTCTGCACCAGAATATAAAAC GCGTCATCAACTAC TTATGCGTTTAGTA TG CCCTAGAGCTAATTTGAATCCTGTTTTAAATCTTGTATTNTT AAAAAATACGATGCCCTTGTT ] [+] EMBL AI111095 [ ACGTTAGCATGGACGACTGTTGAANTGGCTGCAGGGCACAGAACAAATCTGTTGGCTGCCGCCGGTAAACTACGTGAAATTCGA TTATTACATCCTGAACAATTAGTATGCTATGCTGAAATGCGCGG CCATAAAGATGATGTTGCTTGTATGATATTTCATCCTGAAAAGCCTACTATCTTATTTTCTGGTGATTCTAAGTCTTGCATTTTAGTATGGGATA TTGGTNTACCTTCTGCACCAGAATATAAAAC GCGTCATCAACTAC TTATGCGTTTAGTA TG CCCTAGAGCTAATTTGAATCCNGTTT ] [+] EMBL CD132477 [ GA TTATTACATCCTGAACAATTAGTATGCTATGCTGAAATGCGCGG CCATAAAGATGATGTTGCTTGTATGATATTTCATCCTGAAAAGCCTACTATCTTATTTTCTGGNGATTCTAAGTCTTGCATTTTAGTATGGGATA TTGGTATACCTTCTGCACCAGAATATAAAAC GCGTCATCAACTAC TTATGCGTTTAGTA TG CCCTAGAGCTAATTTGAATCCTGTTTTAAATCTTGTATTTTTAAAAAAATACGATGCCCTTGTTGCTGNATGCGAAGATGGAATATTCTCATGGACATTGAAAGATTTTCGTAAAGAAAAAACTAGTGATGAAAAAGAAGCTGAACTTTGATTGAAAAGTCCACTCGTCGTGAACCATGTTTTGATGGTCTGGNCTCATTATCCGATGATTNATTGN] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||