These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10062#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 13 consensus length = 1342 fasta sequence [CTGTGACCTTGTTATCATTGGGTTTGCAGTTACTCACTTGTGGTGTTGTACAATTTTCAGTCTTCGTGTTCACTCGACTACAACCATGGTATTTACCCC-TGTTTGCTTATCATGAAGACTATGAATTAAAAAATTAT-GAAAGTACGGCCGTATTCTCCGTATCTGTCTATCAATATATTATATTGGCTATTGTATTCTCTAAATCTGCACCATATCGTCGATCAATTCTTTCTAATCATTTATTCGTTGTGAACCTTATTGCATGTATTGCCGGATCATTATACCTCACATCTCTTCCAGCCCGTGTGGTTCGCAAATTGTTTGAACTGTGTCGTTTCCCTTCAGTTTATTTTGTAATAATTCTTCATGGAATAGTATTGGGGAATTTACTGTTTGGATATATTTTGGAATCGATCGTTGATGGTGTTTCATTTCGACAACGAATACGTCATATTCAGCGTGCTTTATTTCCCAGACATGTTTCACGTAAAGACTATGAACACATTCGTGACGAAATAGATAGATTGGCTGGAGTGTGGCCACCAATTATACGATCTGCTAGTGTGCAAGCGTTACCAAGAGAGTTGTTCAATGAATGTGATGTTGTTGGACAAATTGCACAAACATCAAGAAAACGCTATAATTCAAGACTTTCAACCGACAGTGAATCTGATGAAGATTTTATTTCAGTTACTTCTGAGGAAAAAGCTGTCCTGTGTAATAGTTTACATGATAATAATATTGTTCATCAACAAGTACCATTGCATTACAATTCTCAATCTCCGTCTTGTGTTTTTGATACTGTGCCGAAAAGTGCGATCGAAAAGTCTGTTAACAAGAAACGGACAAGTTCTACTAGCAGCCACAATCGCCATTCGTTTAACACTACGAGAAGCCTTGAAAGCAAAAGTATCAAACACAATACTTTTAAGGAAAACACTCCTAGACAACAAACGCCTGTAGCACACCAAACACTGGAGGTTGGAGTTCTTACTCCGACTCGACGAGCTGAACGTATTCGATCACAGAGTGGACCAAAACCACTTAGTCCAAATTCTGTTGACCTTCAGTCGGACCCATTCCCATCAGCTACCTACTACTGATAGGATAAGTTTGTCGAGGGGATTCACTTTGTTAGTCTTTCGATGTATAATA-TTTACTGTTATCATCAGTAGATGATTTCAAATCAATAACTGTATTTCCCTCTAAATCCCTGTACACAATATGAAGGATTGTTTTTTCCTGTCTGTAATTCGGATGGTTTATTTTCTTCTCTTACATTAAACTGTGAGAACTTTTCTGTTAGGTCACACTTTGTCTCTCACTCTGTTATAATGACAAG] [+] EMBL CD167754 [CTGTGACCTTGTTATCATTGGGTTTGCAGTTACTCACTTGTGGTGTTGTACAATTTTCAGTCTTCGTGTTCACTCGACTACAACCATGGTATTTACCCC TGTTTGCTTATCATGAAGACTATGAATTAAAAAATTAT GAAAGTACGGCCGTATTCTCCGTATCTGTCTATCAATATATTATATTGGCTATTGTATTCTCTAAATCTGCACCATATCGTCGATCAATTCTTTCTAATCATTTATTCGTTGTGAACCTTATTGCATGTATTGCCGGATCATTATACCGCACATCTCTTCCAGCCCGTGTGGTTCGCAAATTGTTTGAACTGTGTCGTTTCCCTTCAGTTTATTTTGTAATAATTCTTCATGGAATAGTATTGGGGAATTTACTGTTTGGATATATTTTGGAATCGATCGTTGATGGTGTTTCATTTCGACAACGAATACGTCATATTCAGCGTGC ] [+] EMBL CD060631 [ TACAACCATGGTATTTACCCCGTG TTGCTTATCATGAAGACTATGAATTAAAAAATTAT GAAAGTACGGTCGTATTCTCCGTATCTGTCTATCAATATATTATATTGGCTATTGTATTCTCTAAATCTGCACCATATCGTCGATCAATTCTTTCTAATCATTTATTCGTTGTGAACCTTATTGCATGTATTGCCGGATCATTATACCTCACATCTCTTCCAGCCCGTGTGGTTCGCAAATTGTTTGAACTGTGTCGTTTCCCTTCAGTTTATTTTGTGATAATTCTTCATGGAATAGTATTGGGGAATTTACTGTATGGATATATTTCGGAATCGATCGTTGATGGTGTTTCATTTCGACAACGAATACGTCATATTCAGCGTGCTTTATTTCCCAGACATGTTTCACGTAAAGACTATGAACACATTCGTGACGAAATAGATAGATTGGCTGGAGTGTG ] [+] EMBL CD060639 [ GGTATTTACCCC TGTTTGCTTATCATGAAGACTATGAATTAAAAAATTATAGAAAGTACGGCCGTATTCTCCGTATCTGTCTATCAATATATTATATTGGCTATTGTATTCTCTAAATCTGCACCATATCGTCGATCAATTCTTTCTAATCATTTATTCGTTGTGAACCTTATTGCATGTATTGCCGGATCATTATACCTCACATCTCTTCCAGCCCGTGTGGTTCGCAAATAGTTTGACCTGTGTCGTTTCCCTTCAGTTTATTTCGTGATAATTCTTCA ] [-] EMBL CD167816 [ GTATTCTCCGTATCTGTCTATCAATATATTATATTGGCTATTGTATTCTCTAAATCTGCACCATATCGTCGATCAATTCTTTCTAATCATTTATTCGTTGTGAACCTTATTGCATGTATTGCCGGATCATTATACCTCACATCTCTTCCAGCCCGTGTGGTTCGCAAATTGTTTGAACTGTGTCGTTTCCCTTCAGTTTATTTTGTAATAATTCTTCATGAAATAGTATTGGGGAATTTACTGTTTGGATATATTTTGGAATCGATCGTTGATGGTGTTTCATTTCGACAACGAATACGTCATATTCAGCGTGCTTTATTTCCCAGACATGTTTCACGTAAAGACTATGAACACATTCGTGACGAAATAGATAGATTGGCTGGAGTGTGGCCACCAATTATACGATCTGCTAGTGTGCAAGCGTTACCAAGAGAGTTGTTCAATGAATGTGATGTTGTTGGACAAAT ] [+] EMBL CD077643 [ ggcacgaggGAATACGTCATATTCAGCGTGCTTTATTTCCCAGACATGTTTCACGTAAAGACTATGAACACATTCGTGACGAAATAGATAGATTGGCTGGAGTGTGGCCACCAATTATACGATCTGCTAGTGTGCAAGCGTTACCAAGAGAGTTGTTCAATGAATGTGATGTTGTTGGACAAATTGCACAAACATCAAGAAAACGCTATAATTCAAGACTTTCAACCGACAGTGAATCTGATGAAGATTTTATTTCAGTTACTTCTGAGGAAAAAGCTGTCCTGTGTAATAG TTACATGATAATAATATTGTTCATCAACAAGTACCATTGCATTACAA ] [+] EMBL CD183053 [ TACGATCTGCTAGTGTGCAAGCGTTACCAAGAGAGTTGTTCAATGAATGTGATGTTGTTGGACAAATTGCACAAACATCAAGAAAACGCTATAATTCAAGACTTTCAACCGACAGTGAATCTGATGAAGATTTTATTTCAGTTACTTCTGAGGAAAAAGCTGTCCTGTGTAATAGTTTACATGATAATAATATTGTTCATCAACAAGTACCATTGCATTACAATTCTCAATCTCCGTCTTGTGTTTTTGATACTGTGCCG AAAGTGCGATC ] [+] EMBL CD079265 [ AATCTGATGAAGATTTTATTTCAGTTACTTCTGAGGAAAAAGCTGTCCTGTGTAATAGTTTACATGATAATAATATTGTTCATCAACAAGTACCATTGCATTACAATTCTCAATCTCCGTCTTGTGTTTTTGATACTGTGCCGAAAAGTGCGATCGAAAAGTCTGTTAACAAGAAACGGACAAGTTCTACTAGCAGCCACAATCGCCATTCGTTTAACACTACGAGAAGCCTTGAAAGCAAAAGTATCAAACACAATACTTTTAAGGAAAACACTCCTAGACAACAAACGCCTGTAGCACACCAAACACTGGAGGTTGGAGTTCTTACTCCGACTCGACGAGCTGAACGTATTCGATCACAGAGTGGACCAAAACCACTTAGTCCAAATTCTGTTGACCTTCAGTCGGACCCATTCCCATCAGCTACCTACTACTGATAGGATAAGTTTGTCGAGGGGATTCACTTTGTTAGTCTTTCGATGTATAATA TTTACTGTTATCATCAGTAGATGATTTCAAATCAATAACTGTATTTCCCTCTAAATCCCTGTACACAATATGAAGGATTGTTTTTTCCTGTCTGTAATTCGGATGGTTTATTNTCTTCTCTTACATTANAC ] [-] EMBL CD112028 [ GCTGTCCTGTGTAATAGTTTACATGATAATAATA TGTTCATCAACAAGTACCATTGCATTACAATTCTCAATCTCCGTCTTGTGTTTTTGATACTGTGCCGAAAAGTGCGATCGAAAAGTCTGTTAACAAGAAACGGACAAGTTCCACTAGCAGCCACAATCGCCATTCGTTTAACACTACGAGAAGCCTTGAAAGCAAAAGTATCAAACACAATACTTTTAAGGAAAACACTCCTAGACAACAAACGCCTGTAGCACACCAAACACTGGAGGTTGGAGTTCTTA ] [-] EMBL CD127309 [ AATAATATTGTTCATCAACAGGTACCATTGCATTACAATTCTCAATCTCCGTCTTGTGTTTTTGATACTGTGCCGAAAAGTGCGATCGAAAAGTCTGTTAACAAGAAACGGACAAGTTCTACTAGCAGCCACAATCGCCATTCGTTTAACACTACGAGAAGCCTTGAAAGCAAAAGTATCAAACACAATACTTTTAAGGAAAACACTCCTAGACAACAAACGCCTGTAGCACACCAAACACTGGAGGTTGGAGTTCTTACTCCGACTCGACGAGCTGAACGTATTCGATCACAGAGTGGACCAAAACCACTTAGTCCAAATTCTGTTGACCTTCAGTCGGAAACATTCCCATCAGCTACCTACc ] [-] EMBL CD201730 [ TCGCCATTCGTTTAACACTACGAGAAGCCTTGAAAGCAAAAGTATCAAACACAATACTTTTAAGGAAAACACTCCTAGACAACAAACGCCTGTAGCACACCAAACACTGGAGGTTGGAGTTCTTACTCCGACTCGACGAGCTGAACGTATTCGATCACAGAGTGGACCAAAACCACTTAGTCCAAATTCTGTTGACCTTCAGTCGGACCCATTCCCATCAGCTACCTACTACTGATAGGATAAGTTTGTCGAGGGGATTCACTTTGTTAGTCTTTCGATGTATAATA TTTACTGTTATCATCAGTAGATGATTTCAAATCAATAACTGTATTTCCCTCTAAATCCCTGTACACAATATGAAGGATTGTTTTTTCCTGTCTGTAATTCGGATGGTTTATTTTCTTCTCTTACATTAAACTGTGAGAACTTTTCTGTTAGGTCACACTT ] [-] EMBL CD186675 [ TTCTAACTCCGACTCGACGAGCTGAACGTATTCGATCACAGAGTGGACCAAAACCACTTAGTCCAAATTCTGGTGACCTTCAGTCGGACCCATTCCCATCAGCTACCTACTACTGATAGGATAAGTTTGTCGAGGGGATTCACTTTGTTAGTCTTTCGATGTATAATATTTTACTGTTATCATCAGTAGATGATTTCAAATCAATAACTGTATTTCCCTCTAAATGCCTGTACACAATATGAAGGATTGTTTTTTCCTGTCTGTAATTCGGATGGTTTATTTTCTTCTCTTACATTAAACTGTGAGAACTTTTCTGTTAGGTCACACTTTGTCTCTCACTCTGTTATAATGACAAG] [+] EMBL CD197228 [ CTTACTCCGACTCGACGAGCTGAACGTATTCGATCACAGAGTGGACCAAAACCACTTAGTCCAAATTCTGTTGACCTTCAGTCGGACCCATTCCCATCAGCTACCTACTACTGATAGGATAAGTTTGTCGAGGGGATTCACTTTGTTAGTCTTTCGATGTATAATA TTTACTGTTATCATCAGTAGATGATTTCAAATCAATAACTGTATTTCCCCCTAAATCCCTGTACACAATATGAAGGATTGTTTTTTCCTGTCTGTAATTCGGATGGTTTATTTTCTTCTCTTACATTAAACTGTGAGAACTTTTCTGTTAGGTCACACTTTGTCTCTC ] [-] EMBL CD197136 [ TTACTCCGACTCGACGAGCTGAACGTATTCGATCACAGAGTGGACCAAAACCACTTAGTCCAAATTCTGTTGACCTTCAGTCGGACCCATTCCCATCAGCTACCTACTACTGATAGGATAAGTTTGTCGAGGGGATTCACTTTGTTAGTCTTTCGATGTATAATA TTTACTGTTATCATCAGTAGATGATTTCAAATCAATAACTGTATTTCCCTCTAAATCCCTGTACACAATATGAAGGATTGTTTTTTCCTGTCTGTAATTCGGATGGTTTATTTTCTTCTCTTACATTAAACTGTGAGAACTTTTCTGTTAGGTCACACTTTGTCTCTCA ] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||