These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10114#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 13 consensus length = 894 fasta sequence [ACAGTGGTGAGCCTGAGACATCTGTAGTTTTTTTATCCCTTTTGGATTGCTTTCCAGATCTAGCCACACATAATTCATGTAAGAAACTACTTGATAATGCATCATACGAACTGAAAACTGAATTTAATAAACTTATAAGACAGGACCACTCTCCATTTTTCTTCCCCATTTCAATAGCCTTCTGTAACTCGGTTAATGTCAAACCAGTTTTACGAGATTCACGTTCGATAGATGTGTTCAATGATGGAGTTGTGTGGTTATTTTGGTTTGTTGGTCCTTTGAGGGCTTTCAAAGTATCAGAGCTCGAACTAGATGGCCTAGATGTTCCAAACAGGTGACTGCGACTAAGGAAAGCGGAAGTTAAAGAGTTATCATTGTCCGCCGCGTAGTCCTCTGTATTAACTCCAGAAGCTGGCTCGTTTAGCTGGGAAGAATTTATTTCGTCATTTTCCGAAGCATCAAACAGAAACATAATTAACCGAGTAACTTCAGCGGGTGTCATCAGAGAATGAAACGAATCTTCATCGGGACCTGATGTTATGGCATCCGAAGTAGCAGCAAGCTGTTGTGATGAAGGGACAGAAGTCGTTTGAAGGCTTGGAAGCTCTTGAGAAAGGTAACTAGACGCTTCATTAATTTCGTTCGACGTCTCATCACCGTTGTCATTCCTATTAACTTCAGGTTCCACAGAACTTGAAGTTGATGGGTTGCTCATTCCAGAAGATGATAAGATTGCGTCAGTAGATAAACAAAGATCAGCACGGTTGACTGTTAATTCTATTGCTAGAGCAGCTGCTTGATTTGGTGTAATACCCGAATGTGCAAAATTAGCTGAAGATGCACAGTTTCTATTTTGACAATCTACATTACGANCACCATGGATAAGCTGGTTAA] [+] EMBL CD164443 [ACAGTGGTGAGCCTGAGACATCTGTAGTTTTTTTATCCCTTTTGGATTGCTTTCCAGATCTAGCCACACATAATTCATGTAAGAAACTACTTGATAATGCATCATACGAACTGAAAACTGAATTTAATAAACTTATAAGACAGGACCACTCTCCATTTTTCTTCCCCATTTCAATAGCCTTCTGTAACTCGGTTAATGTCAAACCAGTTTTACGAGATTCACGTTCGATAGATGTG ] [-] EMBL CD164484 [ CAGTGGTGAGCCTGAGACATCTGTAGTTTTTTTATCCCTTTTGGATTGCTTTCCAGATCTAGCCACACATAATTCATGTAAGAAACTACTTGATAATGCGTCATACGAACTGAAAACTGAATTTAATAAACTTATAAGACAGGACCACTCTCCATTTTTCTTCCCCATTTCAATAGCCTTCTGTAACTCGGTTAATGTCAAACCAGTTTTACGAGATTCACGTTCGATAGATGTGT ] [-] EMBL CD164328 [ CAGTGGTGAGCCTGAGACATCTGTAGTTTTTTTATCCCTTTTGGATTGCTTTCCAGATCTAGCCACACATAATTCATGTAAGAAACTACTTGATAATGCATCATACGAACTGAAAACTGAATTTAATAAACTTATAAGACAGGACCACTCTCCATCTTTCTTCCCCATTTCAATAGCCTTCTGTAACTCGGTTAATGTC AACCAGTTTTACGAGATTCACGTTCGATAGATGTGT ] [-] EMBL CD164343 [ CAGTGGTGAGCCTGAGACATCTGTAGTTTTTTTATCCCTTTTGGATTGCTTTCCAGATCTAGCCACACATAATTCATGTAAGAAACTACTTGATAATGCATCATACGAACTGAAAACTGAATTTAATAAACTTATAAGACAGGACCACTCTCCATCTTTCTTCCCCATTTCAATAGCCTTCTGTAACTCGGTTAATGTC AACCAGTTTTACGAGATTCACGTTCGATAGATGTGT ] [-] EMBL CD164436 [ CAGTGGTGAGCCTGAGACATCTGTAGTTTTTTTATCCCTTTTGGATTGCTTTCCAGATCTAGCCACACATAATTCATGTAAGAAACTACTTGATAATGCATCATACGAACTGAAAACTGAATTTAATAAACTTATAAGACAGGACCACTCTCCATTTTTCCTCCCCATTTCAATAGCCTTCTGTAACTCGGTTAATGTCAAACCAGTTTTACGAGATTCACGTTCGATAGATGTGT ] [-] EMBL CD130136 [ TAAGAAACTACTTGATAATGCATCATACGAACTGAAAACTGAATTTAATAAACTTATAAGACAGGACCACTCTCCATTTTTCTTCCCCATTTCAATAGCCTTCTGTAACTCGGTTAATGTCAAACCAGTTTTACGAGATTCACGTTCGATAGATGTGTTCAATGATGGAGTTGTGTGGTTATTTTGGTTTGTTGGTCCTTTGAGGGCTTTCAAAGTATCAGAGCTCGAACTAGATGGCCTAGATGTTCCAAACAGGTGACTGCGACTAAGGAAAGCGGAAGTTAAAGAGTTATCATTGTCCGCCGCGTAGTCCTCTGTATTAAC ] [-] EMBL CD064967 [ GTAACTCGGTTAATGTCAAACCAGCTTTACGAGATTCACGTTCGATAGATGTGTTCAATGATGGAGTGGTGTGGTTATTTTGGTTTGTTGGTCCTTGGAGGGCTTTCAAAGTATCAGAGCTCGAACTAGATGGCCTAGATGTTCCAAACAGGTGACTGCGACTAAGGAAAGCGGAAGTTAAAGAGTTATCATTGTCCGCCGCGTAGTCCTCTGTATTAACTCCAGAAGCTGGCTCGTTTAGCTGGGAAGAATTTATTTCGTCATTTTCCGAAGCATCAAACAGAAACATAATTAACCGAGTAACTTCAGCGGGTGTCATCAGAGAATGAAGCGAATCTTCATCGGGACCTGATGTTATGGCATCCGAAGTAGC ] [+] EMBL CD127004 [ GTTACTCGGTTAATGTCAAACCAGTTTTACGAGATTCACGTTCGATAGATGTGTTCAATGATGGAGTTGTGTGGTTATTTTGGTTTGTTGGTCCTTTGAGGGCTTTCAAAGTATCAGAGCTCGAACTAGATGGCCTAGATGTTCCAAACAGGTGACTGCGACTAAGGAAAGCGGAAGTTAAAGAGTTATCATTGTCCGCCGCGTAGTCCTCTGTATTAACTCCAGAAGCTGGCTCGTTTAGCTGGGAAGAATTTATTTCGTCATTTTCCGAAGCATCAAACAGAAACATAATTAACCGAGTAACTTCAGCGGGTGTCATCAGAGAATGAAACGAATCTTCATCGGGACCTGATGTTATG ] [-] EMBL CD167076 [ TAACTCGGTTAATGTCAAACCAGTTTTACGAGATTCACGTTCGATAGATGTGTTCAATGATGGAGTTGTGTGGTTATTTTGGTTTGTTGGTCCTTTGAGGGCTTT ] [-] EMBL CD064928 [ TAACTCGGTTAATGTCAAACCAGTTTTACGAGATTCACGTTCGATAGATGTGTTCAATGATGGAGTTGTGTGGTTATTTTGGTTTGTTGGTCCTTTGAGGGCTTTCAAAGTATCAGAGCTCGAACTAGATGGCCTAGATGTTCCAAACAGGTGACTGCGACTAAGGAAAGCGGAAGTTAAAGAGTTATCATTGTCCGCCGCGTAGTCCTCTGTATTAACTCCAGAAGCTGGCTCGTTTAGCTGGGAAGAATTTATTTCGTCATTTTCCGAAGCATCAAACAGAAACATAATTAACCGAGTAACTTCAGCGGGTGTCATCAGAGAATGAAACGAATCTTCATCGGGACCTGATGTTATGGCATCCGAAGTAGC ] [-] EMBL CD064995 [ TAACTCGGTTAATGTCAAACCAGTTTTACGAGATTCACGTTCGATAGATGTGTTCAATGATGGAGTTGTGTGGTTATTTTGGTTTGTTGGTCCTTTGAGGGCTTTCAAAGTATCAGAGCTCGAACTAGATGGCCTAGATGTTCCAAACAGGTGACTGCGACTAAGGAAAGCGGAAGTTAAAGAGTTATCATTGTCCGCCGCGTAGTCCTCTGTATTAACTCCAGAAGCTGGCTCGTTTAGCTGGGAAGAATTTATTTCGTCATTTTCCGAAGCATCATACAGAAACATAATTAACCGAGTAACTTCAGCGGGTGTCATCAGAGAATGAAACGAATCTTCATCGGGACCTGATGTTATGGCATCCGAAGTAGC ] [-] EMBL CD064977 [ TAACTCGGTTAATGTCAAGCCAGCTTTACGAGATTCACGTTCGATAGATGTGTTCAATGATGGAGTTGTGTGGTTATTTTGGTTTGTTGGTCCTTTGAGGGCTTTCAAAGTATCAGAGCTCGAACTAGATGGCCTAGATGTTCCAAACAGGTGACTGCGACTAAGGAAAGCGGAAGTTAAAGAGTTATCATTGTCCGCCGCGTAGTCCTCTGTATTAACTCCAGAAGCTGGCTCGTTTAGCTGGGAAGAATTTATTTCGTCATTTTCCGAAGCATCAAACAGAAACATAATTAACCGAGTAACTTCAGCGGGTGTCATCAGAGAATGAAGCGAATCTTCATCGGGACCTGATGTTATGGCATCCGAAGTAGCAGCAA ] [+] EMBL CD096928 [ GTTGATCCTTTGAGGGCTTTCAAAGTATCAGAGCTCGAACTAGATGGCCTAGATGTTCCAAACAGGTGACTGCGACTAAGGAAAGCGGAAGTTAAAGAGTTATCATTGTCCGCCGCGTAGTCCTCTGTATTAACTCCAGAAGCTGGCTCGTTTAGCTGGGAAGAATTTATTTCGTCATTTTCCGAAGCATCAAACAGAAACATAATTAACCGAGTAACTTCAGCGGGTGTCATCAGAGAATGAAACGAATCTTCATCGGGACCTGATGTTATGGCATCCGAAGTAGCAGCAAGCTGTTGTGATGAAGGGACAGAAGTCGTTTGAAGGCTTGGAAGCTCTTGAGAAAGGTAACTAGACGCTTCATTAATTTCGTTCGACGTCTCATCACCGTTGTCATTCCTATTAACTTCAGGTTCCACAGAACTTGAAGTTGATGGGTTGCTCATTCCAGAAGATGATAAGATTGCGTCAGTAGATAAACAAAGATCAGCACGGTTGACTGTTAATTCTATTGCTAGAGCAGCTGCTTGATTTGGTGTAATACCCGAATGTGCAAAATTAGCTGAAGATGCACAGTTTCTATTTTGACAATCTACATTACGANCACCATGGATAAGCTGGTTAA] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||