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Schistosoma mansoni
cluster # 10185 cluster # 10185       Sequences # 14       consensus # 5


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10185#0 length = 973 sequences # 3  
consensus_10185#1 length = 763 sequences # 5  
consensus_10185#2 length = 539 sequences # 4  
consensus_10185#3 length = 373 sequences # 1  
consensus_10185#4 length = 305 sequences # 1  

consensusID : consensus_10185#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 973
fasta sequence
                              [GTGGTCAGGGTTACACAACTGGTACTAAGATACCATATTCTATGGGCGATCCAGGACATACAGTAAACTCTAATCACAGTCCAGCATATCCCAATCCCGTCACTTCTCAGGGCGAAAACCATCGTTTCCCTTCTAATGCAACTCATCCTGTTTGCCGTAGTATTTCGCATCAGAATAGTCCAGCTGTGATTTGCAGTCCACATAATCCAAACAATACCACCACATCTGTTTCTAGTGCATCACATCAAACTTGTGTCTCTCTATCTCATTATGATTTGTCGTCACGTCAAGTTGACAAGATCATCGAAATTTTAGCTGAACAGGCTCACTGTCAAAGTACAACTGAGGAATACAATTTCAACAAAAATGTATCACTTAGCTCTAGCAGATTACCAGGAAATTTAAAAGGATCCACATCACCTGGACATTCAACCCGAACATTCATTTCACAGACCCTTCAAACCAACCATTCTTTGAACAGAGATTCCGTAAATCCTAACACTCGATCACAACACACCCAGTTAAATGACCGTGTAACAGGTTGTGAAAGCAGCTCTGCATCACCATACCTCCAGCCATATATATGGAGATTCTGCAACATCCGTACAGTCAAGTAATCGTCTCAATACTTGTCCACATTTAGATTCAGATCTTCCTGTCAATAAAAAAGCTCTTNAAAACAAAAATAATATCTATACGACAACTCATGTTAGCCGTACCTTTCCATTACAGAGCGGCATGTTGCGGACCAGCGCTTCCAGCCGATTGAATACGGACTCATTTATGTTCAATAAAGGCAATTCCGGACTAGACACATCAGCGTCTCCTGTATATGCTTGCAATTTTTCAGATGTTAACAAACCCTGTAATACGGTTGAACATACACCGGATGTAGACAAAAAGGAGATTGCAAATTTACCAAGTCCTTGTTCTGCTTCCCCATCAGTTCGTTCAAGCCATTCTACCACTATGT]

[-] EMBL CD160683             [GTGGTCAGGGTTACACAACTGGTACTAAGATACCATATTCTATGGGCGATCCAGGACATACAGTAAACTCTAATCACAGTCCAGCATATCCCAATCCCGTCACTTCTCAGGGCGAAAACCATCGTTTCCCTTCTAATGCAACTCATCCTGTTTGCCGTAGTATTTCGCATCAGAATAGTCCAGCTGTGATTTGCAGTCCACATAATCCAAACAATACCACCACATCTGTTTCTAGTGCATCACATCAAACTTGTGTCTCTCTATCTCATTATGATTTGTCGTCACGTCAAGTTGACAAGATCATCGAAATTTTAGCTGAACAGGCTCACTGTCAAAGTACAACTGAGGAATACAATTTCAACAAAAATGTATCACTTAGCTCTAGCAGATTACCAGGAAATTTAAAAGGATCCACATCACCTGGACATTCAACCCGAACATTCATTTCACAGACCCTTCAAACCAACCATTCTTTGAACAGAGATTCCGTAAATCCTAACACTCGATCACAACACACCCAGTTAAATGACCGTGTAACAGGTTGTG                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CD180210             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                           AAACCAACCATTCTTTGAACAGAGATTCCGTAAATCCTAACACTCGATCACAACACACCCAGTTAAATGACCTTGT ACAGGTTATGAAAGCAGCTCTGCATCACCATACCTCCAGCCATATATATGGAGATTCTGCAACATCCGTACAGTCAAGTAATCGTCTCAATACTTGTCCACATTTAGATTCAGATCTTCCTGTCAATAAAAAAGCTCTTNAAAACAAAAATAAT                                                                                                                                                                                                                                                                                           ]
[-] EMBL CD114210             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              aCCATATATGTGGAGATTCTGCAACATCCGTACAGTCAAGTAATCGTCTCAATACTTGTCCACATTTAGATTCAGATCTTCCTGTCAATAAAAAAGGTCTTGAGAACAAAGATGATATCTATACGACAACTCATGTTAGCCGTACCTTTCCATTACAGAGCGGCATGTTGCGGACCAGCGCTTCCAGCCGATTGAATACGGACTCATTTATGTTCAATAAAGGCAATTCCGGACTAGACACATCAGCGTCTCCTGTATATGCTTGCAATTTTTCAGATGTTAACAAACCCTGTAATACGGTTGAACATACACCGGATGTAGACAAAAAGGAGATTGCAAATTTACCAAGTCCTTGTTCTGCTTCCCCATCAGTTCGTTCAAGCCATTCTACCACTATGT]


>consensus_10185#0 GTGGTCAGGGTTACACAACTGGTACTAAGATACCATATTCTATGGGCGATCCAGGACATA CAGTAAACTCTAATCACAGTCCAGCATATCCCAATCCCGTCACTTCTCAGGGCGAAAACC ATCGTTTCCCTTCTAATGCAACTCATCCTGTTTGCCGTAGTATTTCGCATCAGAATAGTC CAGCTGTGATTTGCAGTCCACATAATCCAAACAATACCACCACATCTGTTTCTAGTGCAT CACATCAAACTTGTGTCTCTCTATCTCATTATGATTTGTCGTCACGTCAAGTTGACAAGA TCATCGAAATTTTAGCTGAACAGGCTCACTGTCAAAGTACAACTGAGGAATACAATTTCA ACAAAAATGTATCACTTAGCTCTAGCAGATTACCAGGAAATTTAAAAGGATCCACATCAC CTGGACATTCAACCCGAACATTCATTTCACAGACCCTTCAAACCAACCATTCTTTGAACA GAGATTCCGTAAATCCTAACACTCGATCACAACACACCCAGTTAAATGACCGTGTAACAG GTTGTGAAAGCAGCTCTGCATCACCATACCTCCAGCCATATATATGGAGATTCTGCAACA TCCGTACAGTCAAGTAATCGTCTCAATACTTGTCCACATTTAGATTCAGATCTTCCTGTC AATAAAAAAGCTCTTNAAAACAAAAATAATATCTATACGACAACTCATGTTAGCCGTACC TTTCCATTACAGAGCGGCATGTTGCGGACCAGCGCTTCCAGCCGATTGAATACGGACTCA TTTATGTTCAATAAAGGCAATTCCGGACTAGACACATCAGCGTCTCCTGTATATGCTTGC AATTTTTCAGATGTTAACAAACCCTGTAATACGGTTGAACATACACCGGATGTAGACAAA AAGGAGATTGCAAATTTACCAAGTCCTTGTTCTGCTTCCCCATCAGTTCGTTCAAGCCAT TCTACCACTATGT



consensusID : consensus_10185#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 763
fasta sequence
                              [TTCGGAAAACAGTCAGATGGCCACTAACCAGCTTTCCCCAAACACTATCTCAAGAAGATATAAACAATTCGATGGCCGAATATGTTCGCCCACTATCTTAAATTCCAGGCACCTGACAAAAATGGACAGTCCTGTTGCATATCCCAGTTCAGTCAACGTTGAAACTCAGAATTGTAATGTACATAAAGGCTCCTCATATGATCGTGGTCAGGGTTACACAACTGGTACTAAGATACCATATTCTATGGGCGATCCAGGACATACAGTAAACTCTAATCACAGTCCAGCATATCCCAATCCCGTCACTTCTCAGGGCGAAAACCATCGTTTCCCTTCTAATGCAACTCATCCTGTTTGCCGTAGTATTTCGCATCAGAATAGTCCAGCTGTGATTTGCAGTCCACATAATCCAAACAATACCACCACATCTGTTTCTAGTGCATCACATCAAACTTGTGTCTCTCTATCTCATTATGATTTGTCGTCACGTCAAGTTGACAAGATCATCGAAATTTTAGCTGAACAGGCTCACTGTCAAAGTACAACTGAGGAATACAATTTCAACAAAAATGTATCACTTAGCTCTAGCAGATTACCAGAAAATTTAAAAGGATCCACATCACCTGGACATTCAACCCGAACATTCATTCCACAGACCCTTCAAACCAACCATTCTTTGAACAGA-ATTTATTCAATTTATTCTTCAAACTTCATATTAAGTATTGACCAGCCCCTTAGTGTAAGCGTTTCTAAGAAATCAAAT]

[-] EMBL CD178005             [TTCGGAAAACAGTCAGATGGCCACTAACCAGCTTTCCCCAAACACTATCTCAAGAAGATATAAACAATTCGATGGCCGAATATGTTCGCCCACTATCTTAAATTCCAGGCACCTGACAAAAATGGACAGTCCTGTTGCATATCCCAGTTCAGTCAACGTTGAAACTCAGAATTGTAATGTACATAAAGGCTCCTCATATGATCGTGGTCAGGGTTACACAACTGGTACTAAGATACCATATTCTATGGGCGATCCAGGACATACAGTAAACTCTAATCACAGTCCAGCATATCCCAATCCCGTCACTTCTCAGGGCGAAAACCATC                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL CD194898             [ TCGGAAAACAGTCAGATGGCCACTAACCAGCTTTCCCCAAACACTATCTCAAGAAGATATAAACAATTCGATGGCCGAATATGTTCGCCCACTATCTTAAATTCCAGGCACCTGACAAAAATGGACAGTCCTGTTGCATATCCCAGTTCAGTCAACGTTGAAACTCAGAATTGTAATGTACATAAAGGCTCCTCATGTGATCGTGGTCAGGGTTACACAACTGGTACTAAGATACCATATTCTATGGGCGATCCAGGACATACAGTAAACTCTAATCACAGTCCAGCATATCCCAATCCCGTCACTTCTCAGGGCGAAAACCATCGTTTCCCTTCTAATGCAACTCATCCTGTTTGCCGTAGTATTTCGCATCAGAATAGTC                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CD061038             [                                                          TATAAACAATTCGATGGCCGAATATGTTCGCCCACTATCTTAAATTCCAGGCACCTGACAAAAATGGACAGTCCTGTTGCATATCCCAGTTCAGTCAACGTTGAAACTCAGAATTGTAATGTACATAAAGGCTCCTCATATGATCGTGGTCAGGGTTACACAACTGGTACTAAGATACCATATTCTATGGGCGATCCAGGACATACAGTAAACTCTAATCACAGTCCAGCATATCCCAATCCCGTCACTTCTCAGGGCGAAAACCATCGTTTCCCTTCTAATGCAACTCATCCTGTTTGCCGTAGTATTTCGCATCAGAATAGTCCAGCTGTGATTTGCAGTCCACATAATCCAAACAATACCACCACATCTGTTTCTAGTGCATCACATCAAACTTGTGTCTCTCTATCTCATTATGATTTGTCGTCACGTCAAGTTGACAAGATCATCGAAATTTTAGCTGAACAGGCTCACTGTCAAAGTACAACTGAGGAATACAATTTCAACAAAAATGTATCACTTAGCTCTAGCAGATTACCAGAAAATTTAAAAGGATCCACATCACCTGGACATTCAACCCGAACATTCA                                                                                                                     ]
[+] EMBL CD114361             [                                                                                                                                                                                                                        anagagTGGTACTAAGATACCATATTCTATGGGCGATCCAGGACATACAGTAAACTCTAATCACAGTCCAGCATATCCCAATCCCGTCACTTCTCAGGGCGAAAACCATCGTTTCCCTTCTAATGCTTTTCATCCTGTTTGCCGTAGTATTTCGCATCAGAATAGTCCAGCTGTGATTTGCAGTCCACATAATCCAAACAATACCACCACATCTGTTTCTAGTGCATCACATCAAACTTGTGTCTCTCTATCTCATTATGATTTGTCGTCACGTCAAGTTGACAAGATCATCGAAATTTTATCTGAACAGGCTCACTGNCAAAGCACAACTGAGGAATACAATCTCAACAAAAATGTATCACTTAGCTCTAGCAGATTACCAGAAAATTTAAAAGGATCCACATCACCTGGACATTCAACCCGAACATTCATTCCACAGACCCTTCAAACCAACCATTCTTTGAACAGAGATT                                                                           ]
[-] EMBL CD202841             [                                                                                                                                                                                                                                                                                                                                                      AACTCATCCTGTTTGCCGTAGTATTTCGCATCAGAATAGTCCAGCTGTGATTTGCAGTCCACATAATCCAAACAATACCACCACATCTGTTTCTAGTGCATCACATCAAACTTGTGTCTCTCTATCTCATTATGATTTGTCGTCACGTCAAGTTGACAAGATCATCGAAATTTTAGCTGAACAGGCTCACTGTCAAAGTACAACTGAGGAATACAATTTCAACAAAAATGTATCACTTAGCTCTAGCAGATTACCAGAAAATTTAAAAGGATCCACATCACCTGGACATTCAACCCGAACATTCATTTCACAGACCCTTCAAACCAACCATTCTTGTAAGTGA ATTTATTCAATTTATTCTTCAAACTTCATATTAAGTATTGACCAGCCCCTTAGTGTAAGCGTTTCTAAGAAATCAAAT]


>consensus_10185#1 TTCGGAAAACAGTCAGATGGCCACTAACCAGCTTTCCCCAAACACTATCTCAAGAAGATA TAAACAATTCGATGGCCGAATATGTTCGCCCACTATCTTAAATTCCAGGCACCTGACAAA AATGGACAGTCCTGTTGCATATCCCAGTTCAGTCAACGTTGAAACTCAGAATTGTAATGT ACATAAAGGCTCCTCATATGATCGTGGTCAGGGTTACACAACTGGTACTAAGATACCATA TTCTATGGGCGATCCAGGACATACAGTAAACTCTAATCACAGTCCAGCATATCCCAATCC CGTCACTTCTCAGGGCGAAAACCATCGTTTCCCTTCTAATGCAACTCATCCTGTTTGCCG TAGTATTTCGCATCAGAATAGTCCAGCTGTGATTTGCAGTCCACATAATCCAAACAATAC CACCACATCTGTTTCTAGTGCATCACATCAAACTTGTGTCTCTCTATCTCATTATGATTT GTCGTCACGTCAAGTTGACAAGATCATCGAAATTTTAGCTGAACAGGCTCACTGTCAAAG TACAACTGAGGAATACAATTTCAACAAAAATGTATCACTTAGCTCTAGCAGATTACCAGA AAATTTAAAAGGATCCACATCACCTGGACATTCAACCCGAACATTCATTCCACAGACCCT TCAAACCAACCATTCTTTGAACAGAATTTATTCAATTTATTCTTCAAACTTCATATTAAG TATTGACCAGCCCCTTAGTGTAAGCGTTTCTAAGAAATCAAAT



consensusID : consensus_10185#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 539
fasta sequence
                              [TGCATATCCCAGGTCAGTCAACGTTAAAACTCAGAATTGTAATGTACATAAAGGCTCCTCATATGATCGTGGTCAGGGTTACACAACTGGTACTAAGATACCATATTCTATGGGCGATCCAGGACATACAGTAAACTCTAATCACAGTCCAGCATATCCCAATCCCGTCACTTCTCAGGGCGAAAACCATCGTTTCCCTTCTAATGCAACTCATCCTGTTTGCCGTAGTATTTCGCATCAGAATAGTCCAGCTGTGATTTGCAGTCCACATAATCCAAACAATACCACCACATCTGTTTCTAGTGCATCACATCAAACTTGTGTCTCTCTATCTCATTATGATTTGTCGTCACGTCAAGTTGACAAGATCATCGAAATTTTAGCTGAACAGGCTCACTGTCAAAGTACAACTGAGGAATACAATTTCAACAAAAATGTATCACTTAGCTCTAGCAGATTACCAGAAAATTTAAAAGGATCCACATCACCTGGACATTCAACCCGAACATTCATTTCGCAGACCCTAGAACTTGGGGGGC]

[-] EMBL CD060996             [TGCATATCCCAGGTCAGTCAACGTTAAAACTCAGAATTGTAATGTACATAAAGGCTCCTCATATGATCGTGGTCAGGGTTACACAACTGGTACTAAGATACCATATTCTATGGGCGATCCAGGACATACAGTAAACTCTAATCACAGTCCAGCATATCCCAATCCCGTCACTTCTCAGGGCGAAAACCATCGTTTCCCTTCTAATGCAACTCATCCTGTTTGCCGTAGTATTTCGCATCAGAATAGTCCAGCTGTGATTTGCAGTCCACATAATCCAAACAATACCACCACATCTGTTTCTAGTGCATCACATCAAACTTGTGTCTCTCTATCTCATTATGATTTGTCGTCACGTCAAGTTGACAAGATCATCGAAATTTTAGCTGAACAGGCTCACTGTCAAAGTACAACTGAGGAATACAATTTCAACAAAAATGTATCACTTAGCTCTAGCAGATTACCAGAAAATTTAAAAGGATCCACATCACCTGGACATTCAACCCGAACATTCATTTCGCAGACCCTAGAACTTGGGGGGC]
[+] EMBL CD114462             [                                                                                                     CATATTCTATGGGCGATCCAGGACATACAGTAAACTCTAATCACAGTCCAGCATATCCCAATCCCGTCACTTCTCAGGGCGAAAACCATCGTTTCCCTTCTAATGCAACTCATCCTGTTTGCCGTAGTATTTCGCATCAGAATAGTCCAGCTGTGATTTGCAGTCCACATAATCCAAACAATACCACCACATCTGTTTCTAGTGCATCACATCAAACTTGTGTCTCTCTATCTCATTATGATTTGTCGTCACGTCAAGTTGACAAGATCATCGAAATTTTAGCTGAACAGGCTCACTGTCAAAGTACAACTGAGGAATACAATTTCAACAAAAATGTATCACTTAGCTCTAGCAGATTACCAGAAAA                                                                       ]
[-] EMBL CD066291             [                                                                                                        ATTGGAGGGGCGATCCAGGACANACAGTAAACTGTAATCACAGTCCAGCATATCCCAATCCCGTCACTTCTCAGGGCGAAAACCATCGTTTCCCTTCTAA                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CD179321             [                                                                                                                                                                                           CATCGTTTCCCTTCTAATGCAACTCATCCTGTTTGCCGTAGTATTTCGCATCAGAATAGTCCAGCTGTGATTTGCAGTCCACATAATCCAAACAATACCACCACATCTGTTTCTAGTGCATCACATCAAACTTGTGTCTCTCTATCTCATTGTGATTTGTCGTCACGTCAAGTTGACAAGATCATCGAAATTTTAGCTGAACAGGCTCACTGT                                                                                                                                           ]


>consensus_10185#2 TGCATATCCCAGGTCAGTCAACGTTAAAACTCAGAATTGTAATGTACATAAAGGCTCCTC ATATGATCGTGGTCAGGGTTACACAACTGGTACTAAGATACCATATTCTATGGGCGATCC AGGACATACAGTAAACTCTAATCACAGTCCAGCATATCCCAATCCCGTCACTTCTCAGGG CGAAAACCATCGTTTCCCTTCTAATGCAACTCATCCTGTTTGCCGTAGTATTTCGCATCA GAATAGTCCAGCTGTGATTTGCAGTCCACATAATCCAAACAATACCACCACATCTGTTTC TAGTGCATCACATCAAACTTGTGTCTCTCTATCTCATTATGATTTGTCGTCACGTCAAGT TGACAAGATCATCGAAATTTTAGCTGAACAGGCTCACTGTCAAAGTACAACTGAGGAATA CAATTTCAACAAAAATGTATCACTTAGCTCTAGCAGATTACCAGAAAATTTAAAAGGATC CACATCACCTGGACATTCAACCCGAACATTCATTTCGCAGACCCTAGAACTTGGGGGGC



consensusID : consensus_10185#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 373
fasta sequence
                              [TGCTTGTTCTGTATATCGGTATTTTGCGGCAGCCATTTCGCCTAAATAGTATAATGTAGTTTTGAATAAGGGTGTAATTAAATTTGTGTTTTATCCTTGAAATTGTTAAACTTGACCTCTCTGAATCACTACTCAAATTTTTCTGAAGCTGTAAAAGCAATCAATTTGTACACTGCCATTCTCAGTTGGGATTTTTATTTGTTGTCTAAGTATAGATGTTGTACTTTGATTTTTTTGTGACTATGAGGTTATTTTCTTTAATTTCATTAAGCATGTTGCGGACCAGCGCTTCCAGCCGATTGAATACGGACTCATTTCTGTTCAATAAAGGCAATTCCGGACTAGACACATCAGCGTCTCCTGTATCTGCTTG]

[+] EMBL CD157151             [TGCTTGTTCTGTATATCGGTATTTTGCGGCAGCCATTTCGCCTAAATAGTATAATGTAGTTTTGAATAAGGGTGTAATTAAATTTGTGTTTTATCCTTGAAATTGTTAAACTTGACCTCTCTGAATCACTACTCAAATTTTTCTGAAGCTGTAAAAGCAATCAATTTGTACACTGCCATTCTCAGTTGGGATTTTTATTTGTTGTCTAAGTATAGATGTTGTACTTTGATTTTTTTGTGACTATGAGGTTATTTTCTTTAATTTCATTAAGCATGTTGCGGACCAGCGCTTCCAGCCGATTGAATACGGACTCATTTCTGTTCAATAAAGGCAATTCCGGACTAGACACATCAGCGTCTCCTGTATCTGCTTG]


>consensus_10185#3 TGCTTGTTCTGTATATCGGTATTTTGCGGCAGCCATTTCGCCTAAATAGTATAATGTAGT TTTGAATAAGGGTGTAATTAAATTTGTGTTTTATCCTTGAAATTGTTAAACTTGACCTCT CTGAATCACTACTCAAATTTTTCTGAAGCTGTAAAAGCAATCAATTTGTACACTGCCATT CTCAGTTGGGATTTTTATTTGTTGTCTAAGTATAGATGTTGTACTTTGATTTTTTTGTGA CTATGAGGTTATTTTCTTTAATTTCATTAAGCATGTTGCGGACCAGCGCTTCCAGCCGAT TGAATACGGACTCATTTCTGTTCAATAAAGGCAATTCCGGACTAGACACATCAGCGTCTC CTGTATCTGCTTG



consensusID : consensus_10185#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 305
fasta sequence
                              [GGATCCACATCACCTGGACATTCAACCCGCACATTCATTTCACAGACCCTTCAACACCAACCATTCTTTGAACAGAGATTCCGTAAATCCTAACACTCGATCACAACACACCCAGTTAAATGACCTTGTACAGGTTCTGAAAGCACCTCTGCATCACCATACTTCCAACCATATATACTGGAGATTGCTGCAAGCATCCAGTACAGTCAAGGTAATCGTCTCAATACTTGTCCACATTTAGATTTAGATCTTCCTGTCAATAAAAAAGGTCTTGAGAACAAAGATGATATCTTTACCACTCTGCG]

[-] EMBL CD114088             [GGATCCACATCACCTGGACATTCAACCCGCACATTCATTTCACAGACCCTTCAACACCAACCATTCTTTGAACAGAGATTCCGTAAATCCTAACACTCGATCACAACACACCCAGTTAAATGACCTTGTACAGGTTCTGAAAGCACCTCTGCATCACCATACTTCCAACCATATATACTGGAGATTGCTGCAAGCATCCAGTACAGTCAAGGTAATCGTCTCAATACTTGTCCACATTTAGATTTAGATCTTCCTGTCAATAAAAAAGGTCTTGAGAACAAAGATGATATCTTTACCACTCTGCG]


>consensus_10185#4 GGATCCACATCACCTGGACATTCAACCCGCACATTCATTTCACAGACCCTTCAACACCAA CCATTCTTTGAACAGAGATTCCGTAAATCCTAACACTCGATCACAACACACCCAGTTAAA TGACCTTGTACAGGTTCTGAAAGCACCTCTGCATCACCATACTTCCAACCATATATACTG GAGATTGCTGCAAGCATCCAGTACAGTCAAGGTAATCGTCTCAATACTTGTCCACATTTA GATTTAGATCTTCCTGTCAATAAAAAAGGTCTTGAGAACAAAGATGATATCTTTACCACT CTGCG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10185#1      ------------------------------------------------------------
consensus_10185#2      ------------------------------------------------------------
consensus_10185#0      GTGGTCAGGGTTACACAACTGGTACTAAGATACCATATTCTATGGGCGATCCAGGACATA 60
consensus_10185#4      ------------------------------------------------------------
consensus_10185#3      ------------------------------------------------------------
                                                                                   

consensus_10185#1      ------------------------------------------------------------
consensus_10185#2      ------------------------------------------------------------
consensus_10185#0      CAGTAAACTCTAATCACAGTCCAGCATATCCCAATCCCGTCACTTCTCAGGGCGAAAACC 120
consensus_10185#4      ------------------------------------------------------------
consensus_10185#3      ------------------------------------------------------------
                                                                                   

consensus_10185#1      ------------------------------------------------------------
consensus_10185#2      ------------------------------------------------------------
consensus_10185#0      ATCGTTTCCCTTCTAATGCAACTCATCCTGTTTGCCGTAGTATTTCGCATCAGAATAGTC 180
consensus_10185#4      ------------------------------------------------------------
consensus_10185#3      ------------------------------------------------------------
                                                                                   

consensus_10185#1      ---------------------------------------------------TTCGGAAAA 9
consensus_10185#2      ------------------------------------------------------------
consensus_10185#0      CAGCTGTGATTTGCAGTCCACATAATCCAAACAATACCACCACATCTGTTTCTAGTGCAT 240
consensus_10185#4      ------------------------------------------------------------
consensus_10185#3      ------------------------------------------------------------
                                                                                   

consensus_10185#1      CAGTCAGATGGCCACTAACCAGCTTTCCCCAAACACTATCTCAAGAAGATATAAACAATT 69
consensus_10185#2      ------------------------------------------------------------
consensus_10185#0      CACATCAAACTTGTGTCTCTCTATCTCATTATGATTTGTCGTCACGTCAAGTTGACAAGA 300
consensus_10185#4      ------------------------------------------------------------
consensus_10185#3      ------------------------------------------------------------
                                                                                   

consensus_10185#1      CGATGGCCGAATATGTTCGCCCACTATCTTAAATTCCAGGCACCTGACAAAAATGGACAG 129
consensus_10185#2      ------------------------------------------------------------
consensus_10185#0      TCATCGAAATTTTAGCTGAACAGGCTCACTGTCAAAGTACAACTGAGGAATACAATTTCA 360
consensus_10185#4      ------------------------------------------------------------
consensus_10185#3      ------------------------------------------------------------
                                                                                   

consensus_10185#1      TCCTGTTGCATATCCCAGTTCAGTCAACGTTGAAACTCAGAATTGTAATGTACATAAAGG 189
consensus_10185#2      ------TGCATATCCCAGGTCAGTCAACGTTAAAACTCAGAATTGTAATGTACATAAAGG 54
consensus_10185#0      ACAAAAATGTATCACTTAGCTCTAGCAGATTACCAGGAAATTTAAAAGGATCCACATCAC 420
consensus_10185#4      -----------------------------------------------GGATCCACATCAC 13
consensus_10185#3      ---------------------------TGCTTGTTCTGTATATCGGTATTTTGCGGCAGC 33
                                                                         *         

consensus_10185#1      CTCCTCATATGATCGTGGTCAGGGTTACACAACTGGTACTAAGATACCA--TATTCTATG 247
consensus_10185#2      CTCCTCATATGATCGTGGTCAGGGTTACACAACTGGTACTAAGATACCA--TATTCTATG 112
consensus_10185#0      CTGGACATTCAACCC---GAACATTCATTTCACAGACCCTTCAA-ACCAACCATTCTTTG 476
consensus_10185#4      CTGGACATTCAACCC---GCACATTCATTTCACAGACCCTTCAACACCAACCATTCTTTG 70
consensus_10185#3      CATTTCGCCTAAATAGTATAATGTAGTTTTGAATAAGGGTGTAATTAAATTTGTGTTTTA 93
                       *    *     *        *          *       *   *    *    *  * * 

consensus_10185#1      GGCGATCCAGGACATACAGTAAACTCTAAT-CACAGTC-CAGCATATCCCAATCCCGTCA 305
consensus_10185#2      GGCGATCCAGGACATACAGTAAACTCTAAT-CACAGTC-CAGCATATCCCAATCCCGTCA 170
consensus_10185#0      AACA------GAGATTCCGTAAATCCTAACACTCGATCACAACACA-CCCAGTTAAATGA 529
consensus_10185#4      AACA------GAGATTCCGTAAATCCTAACACTCGATCACAACACA-CCCAGTTAAATGA 123
consensus_10185#3      TCCTT-----GAAAT-TGTTAAACTTGACCTCTCTGAATCACTACT-CAAATTTTTCTGA 146
                         *       ** **    ****    *   * *     **  *   *  * *    * *

consensus_10185#1      CTTCTCAGGGCGAAAACCATCGTTTCCCTTCTAATGCAACTCATCCTGTTTGCCGTAGTA 365
consensus_10185#2      CTTCTCAGGGCGAAAACCATCGTTTCCCTTCTAATGCAACTCATCCTGTTTGCCGTAGTA 230
consensus_10185#0      CCGTGTAA----CAGGTTGTGAAAGCAGCTC---TGCA--TCACCATACCTCCAGCCATA 580
consensus_10185#4      CCTTGTA-----CAGGTTCTGAAAGCACCTC---TGCA--TCACCATACTTCCAACCATA 173
consensus_10185#3      AGCTGTAAAA-GCAATCAATTTGTACACTGCCATTCTCAGTTGGGATTTTTATT-TGTTG 204
                             *      *     *     *    *   *     *     *   *       * 

consensus_10185#1      TTTCGCATCAGAA----TAGTCCAGCTGTGATTTG-CAGTCCACATAATCCAAACAATAC 420
consensus_10185#2      TTTCGCATCAGAA----TAGTCCAGCTGTGATTTG-CAGTCCACATAATCCAAACAATAC 285
consensus_10185#0      TAT-A-TGGAGAT----T-CTGCAA-CATCC-GTA-CAGTCAAG-TAATCGTCTCAATAC 629
consensus_10185#4      TAT-ACTGGAGAT----TGCTGCAAGCATCCAGTA-CAGTCAAGGTAATCGTCTCAATAC 227
consensus_10185#3      TCTAAGTATAGATGTTGTACTTTGATTTTTTTGTGACTATGAGGTTATTTTCTTTAATTT 264
                       * *      ***     *  *       *    *  *  *     ** *      ***  

consensus_10185#1      CA----CCACATCTGTTTCTAGTGCATCACATCAAACTTGTGTCTCTCTATCTCATT--- 473
consensus_10185#2      CA----CCACATCTGTTTCTAGTGCATCACATCAAACTTGTGTCTCTCTATCTCATT--- 338
consensus_10185#0      TTGT--CCACATTTAGATTCAGATCTTCCTGTCAATAAAAAAGCTCTTNAAAACAAAA-- 685
consensus_10185#4      TTGT--CCACATTTAGATTTAGATCTTCCTGTCAATAAAAAAGGTCTTGAGAACAAAG-- 283
consensus_10185#3      CATTAAGCATGTTGCGGACCAGCGCTTCCAGCCGATTGAATACGGACTCATTTCTGTTCA 324
                              **  *        **  * **    * *              *   *      

consensus_10185#1      ATGAT-TTGTCGTCACGTCAAGTTGACAAGATCATCGAAATTTTAGCTGAACAGGCTCAC 532
consensus_10185#2      ATGAT-TTGTCGTCACGTCAAGTTGACAAGATCATCGAAATTTTAGCTGAACAGGCTCAC 397
consensus_10185#0      ATAATATCTATACGACAACTCATGTTAGCCGTACCTTTCCATTACAGAGCGGCATGTTGC 745
consensus_10185#4      ATGATATCTTTACCACTCTGCG-------------------------------------- 305
consensus_10185#3      ATAAAGGCAATTCCGGACTAGACACATCAGCGTCTCCTGTATCTGCTTG----------- 373
                       ** *                                                        

consensus_10185#1      TGTCAAAGTACAACTGAGGAATACAATTTCAACAAAAATGTATCACTTAGCTCTAGCAGA 592
consensus_10185#2      TGTCAAAGTACAACTGAGGAATACAATTTCAACAAAAATGTATCACTTAGCTCTAGCAGA 457
consensus_10185#0      GGACCAGCGCTTCCAGCCGATTGAATACGGACTCATTTATGTTCAATAAAGGCAATTCCG 805
consensus_10185#4      ------------------------------------------------------------
consensus_10185#3      ------------------------------------------------------------
                                                                                   

consensus_10185#1      TTACCAGAAAATTTAAAAGGATCCACATCACCTGGACATTCAACCCGAACATTCATTCCA 652
consensus_10185#2      TTACCAGAAAATTTAAAAGGATCCACATCACCTGGACATTCAACCCGAACATTCATTTCG 517
consensus_10185#0      GACTAGACACATCAGCGTCTCCTGTATATGCTTGCAATTTTTCAGATGTTAACAAACCCT 865
consensus_10185#4      ------------------------------------------------------------
consensus_10185#3      ------------------------------------------------------------
                                                                                   

consensus_10185#1      CAGACCCTTCAAACCAACCATTCTTTGAACAGAATTTATTCAATTTATTCTTCAAACTTC 712
consensus_10185#2      CAGACCCTAGAACTTGGGGGGC-------------------------------------- 539
consensus_10185#0      GTAATACGGTTGAACATACACCGGATGTAGACAAAAAGGAGATTGCAAATTTACCAAGTC 925
consensus_10185#4      ------------------------------------------------------------
consensus_10185#3      ------------------------------------------------------------
                                                                                   

consensus_10185#1      ATATTAAGTATTGACCAGCCCCTTAGTGTAAGCGTTTCTAAGAAATCAAAT 763
consensus_10185#2      ---------------------------------------------------
consensus_10185#0      CTTGTTCTGCTTCCCCATCAGTTCGTTCAAGCCATTCTACCACTATGT--- 973
consensus_10185#4      ---------------------------------------------------
consensus_10185#3      ---------------------------------------------------
                                                                          




Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)