These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10210#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 14 consensus length = 1629 fasta sequence [ATTTTTATTTATTATCCAATAATCTGGGAGCACTGGGTACAAATCAGAAAAATTTACTTACTATAATCACAAGATAATGATGATATTTCTTCAGAAATACAAATATAGTAATGAACAGAATGAAGAGTATGATTCGTTAAGAAAGAAAGAAAAATATGACAAAGTGTAGTAAGAACATTTAGAAGTTTCATAAATCAAGCCACGAACGAATTGTTTGTACCTCAATTTGACGAACTTGACGTGCTGATGGAGGGTCGTTTGGATCTGGTGATCTTAAATCAAGATGATGAGCTCCACCATCTAGTACCAAGGAGATGACTTTCTCTGATTGATCAGTTAAAATTCCACCACCCATCCATGGATCCAAATTTCCATTTGAAAATATAATATTACTTGAAGTTTTCCAAATATTATCACCATAAAATGTTGACAACTGATTAAACGCTGGTGTAACACCCCACCTTCGTTGACAATAACTTGTTACTTGTTGTTTTGTTAGAGGTAAAGAGACGAACATATCATTTTGTAGTACTATCCGAGTCATCGTGTAAATTTCATTTCGGTACAACTCTGAAAATCCCAAGCAAGTGAATCACTACCTAGACCACATCCTGTTATATCAGCACATTCAATAAACTGGGTTTTATAGTCGAAACACGGGAGAGATTGTGAACTGTTGTAGAAAACTCCAACAGCCTCACGAAGGGTCGGGATGAGATCAGTTACTGTTAATGCATTTTTGCACGAGACATTTACAGGATTAGCAGGTAGAC-TTGCCATAAATGATGCCTTGTAGGGATAATCTAACATAGCCATCATAACAAATGCATTGCGAGCCCATTTCAGTACCCAGTAAAATTCGAAATCATTTTGGATAGGTTTACATAACCGTAGGTCATTAGAGAGTTGTTTGTAACCGATATCAGGTTTCTGAGATAGTTGAACAGCTAAATTAAAGGCGTTTTTAA-TTTTTTCTGAACATTTTGGATCAGCATCACGATAGTCCTTAGTGACACTTTCAAAAAAGTCATGAAAATTCCCCTCGCCTGCAACCCATCTAACTGGTGCACTTGAAGCTAAAGCACCTTTAATTATATGAGGATATTTAGCTCTCATATACGCTGCAAGCATGCCTCCATAGCTTCCACCAAATGCAACAACAAGGGATCTAGTCATGTTGAATGTACTTTTGATACCTTCAATTAAATAAGCATAATCTGCTAATGCTTGGTCAATTGAAAGGTATTGAATATATGGCTGCTGGAAGCTTGTATTAAATGGGAGACTTTTCCCATAGTATCTATGTTCAGCAAACAGGACGAAAGCATTGAAACTAGGTGCTAATTCGAATATTAGCCCTGTATTGTTCCAGAAACCATCGATTCCTCCTTCGTTTCCACAATAAAAGAAGATGGGTCCGTTTGGTTTGAACCATTTATCTTCATACAGGTACCGCTGTTTGAAAGTCAGGTTTCTTGCTTGAAAATTAAAGTGATCCAAAGTTTGATCAAAATAGTTTTCTTTCGGTGGCCACGGTATGGATGACGATGAGACATATAAAGTGCAAACAAACAGGAAGAATTGCAAAACAGGGTTTTGATGAACCATGAACCCAAGAGCTGCCTCCAC] [+] EMBL CD076909 [ATTTTTATTTATTATCCAATAATCTGGGAGCACTGGGTACAAATCAGAAAAATTTACTTACTATAATCACAAGATAATGATGATATTTCTTCAGAAATACAAATATAGTAATGAACAGAATGAAGAGTATGATTCGTTAAGAAAGAAAGAAAAATATGACAAAGTGTAGTAAGAACATTTAGAAGTTTCATAAATCAAGCCACGAACGAATTGTTTGTACCTCAATTTGACGAACTTGACGTGCTGATGGAGGGTCGTTTGGATCTGGTGATCTTAAATCAAGATGATGAGCTCCACCATCTAGTACCAAGGAGATGACTTTCTCTGATTGATCAGTTAAAATTCCACCACCCATCCATGGATCCAAA ] [+] EMBL BF936826 [ AATAATCTGGGAGCACTGGGTACAAATCAGAAAAATTTACTTACTATAATCACAAGATAATGATGATATTTCTTCAGAAATACAAATATAGTAATGAACAGAATGAAGAGTATGATTCGTTAAGAAAGAAAGAAAAATATGACAAAGTGTAGTAAGAACATTTAGAAGTTTCATAAATCAAGCCACGAACGAATTGTTTGTACCTCAATTTGACGAACTTGACGTGCTGATGGAGGGTCGTTTGGATCTGGTGATCTTAAATCAAGATGATGAGCTCCACCATCTAGTACCAAGGAGATGACTTTCTCTGATTGATCAGTTAAAATTCCACCACCCATCCATGGATCCAAATTTCCATTTGAAAATATAATATTACTTGAAGTTTTCCAAATATTATCACCATAAAATGTTGACAACTGATTAAACGCTGGTGTAACACCCCACCTTCGTTGACAATAACTTGTTACTTGTTGTTTTGTTAGAGGTAAAGAGACGAACATATCATTTTGTAGTACTATCCGAGTCATCGTGTAAATTTCATTTCGGTACAACTCTGAAAATCCCAAGCAAGTGAATCACTACCTAGACCACATCCTGTTATATCAGCACATTCAATAAACTGGGTTTTATAGTCGAAACACGGGAGAGATTGTGAACTGTTGTAGAAAACTCCAACAGCCTCACGAAGGGTCGGGATGAGATCAGTTAC ] [+] EMBL AI067561 [ TGGGAGCACTGGGTACAAATCACAAAAATTTACTTACTATAATCACAAGATAATGATGATATTTCTTCAGAAATACAAATATAGTAATGAACAGAATGAAGAGTATGATTCGTTAAGAAAGAAAGAAAAATATGACAAAGTGTAGTAAGAACATTTAGAAGTTTCATAAATCAAGCCACGAACGAATTGTTTGTACCTCAATTTGACGAACTTGACGTGCTGATGGAGGGTCGCTTGGATCTGGTGATCTTAAATCAAGATGATGAGCTCCACCATCTAGTACCAAGGAGATGACTTTCTCTGATTGATCAGTTAAAATTCCACCACCCATCCATGGATCCAAATTTCCATTTGAAAATATAATATTACTTGAAGTTTTCCAAATATTATCACCATAAAATGTTGACAACTGATTAAACGCTGGGGTAACACCCCACCTTCGTTGACAAT ] [+] EMBL CD071567 [ GAAAAATTTACTTACTATAATCACAAGATAATGATGATTTTTCTTCAGAAATACAAATATAGTAATGAACAGAATGAAGAGTATGATTCGTTAAGAAAGAAAGAAAAATATGACAAAGTGTAGTAAGAACATTTAGAAGTTTCATAAATCAAGCCACGAACGAATTGTTTGTACCTCAATTTGACGAACTTGACGTGCTGATGGAGGGTCGTTTGGATCTGGTGATCTTAAATCAAGATGATGAGCTCCACCATCTAGTACCAAGGAGATGACTTTCTCTGATTGATCAGTTAAAATTCCACCACCCATCCATGGATCCAAATNTCCATTTGAAAATATAATATTACTTGAAGTTTTCCAAATATTATCACCATAAAATGT ] [-] EMBL CD072712 [ AAAAATTTACTTACTATAATCACAAGATAATGATGATATTTCTTCAGAAATACAAATATAGTAATGAACAGAATGAAGAGTATGATTCGTTAAGAAAGAAAGAGAAATATGACAAAGTGTAGTAAGAACATTTAGAAGTTTCATAAATCAAGCCACGAACGAATTGTTTGTACCTCAATTTGACGAACTTGACGTGCTGATGGAGGGTCGTTTGGATCTGGTGATCTTAAATCAAGATGATGAGCTCCACCATCTAGTACCAAGGAGATGACTTTCTCTGATTGATCAGTTAAA ] [-] EMBL SMRAP119 [ ACCACCCATCCATGGATCCAAATTTCCATTTGAAAATATAATATTACTTGAAGTTTTCCAAATATTATCACCATAAAA ] [-] EMBL CD080101 [ AGTGAATCTCTACGTAGACCACATCCTGTTATATCAGCACATTCAATAAACTGGGTTTTATAGTCGAAACACGGGAGAGATTGTGAACTGTTGTAGAAAACTCCAACAGCCTCACGAAGGGTCGGGATGAGATCAGTTACTGTTAATGCATTTTTGCACGAGACATTTACAGGATTAGCAGGTAGAC TTGCCATAAATGATGCCTTGTAGGGATAATCTAACATAGCCATCATAACAAATGCATTGCGAGCCCATTTCAGTACCCAGTAAAATTCGAAATCATTTTGGATAGGTTTACATAACCGTAGGTCATTAGAGAGTTGTTTGTAACCGATATCAGGTTTCTGAGATAGTTGAACAGCTAAATTAAAGGCGTTTTTAA TTTTTTCTGAACATTTTGGATCAGCATCACGATAGTCCTTAGTGACACTTTCAAAAAAGTCATGAAAATTCCCCTCGCCTGCAACCCATCTAACTGGTGCACTTGAAGCTAAAGCACCTTTAATTATATGAGGATATTTAGCTCTCATATACGCTGCAAGCATGCCTCCATAGCTTCCACCAAATGCAACAACAAGGGATCTAGTCATGTTGAATGTACTTTTGATACCTTCAATTAAATAAGCATAATCTGC ] [-] EMBL CD185731 [ GGATTAGCAGGTAGACTTTGCCATAAATGATGCCTTGTAGGGATAATCTAACATAGCCATCATAACAAATGCATTGCGAGCCCATTTCAGTACCCAGTAAAATTCGAAATCATTTTGGATAGGTTTACATAACCGTAGGTCATTAGAGAGTTGTTTGTAACCGATATCAGGTTTATGAGATAGTTGAACAGCTAAATTAAAGGCGTTTTTAA TTTTTTCTGAACATTTTGGATCAGCATCACGATAGTCCTTAGTGACACTTTCAAAAAAGTCATGAAAATTCCCCTCGCCTGCAACCCATCTAACTGGTGCACTTGAAGCTAAAGCACCTTTAATTATATGAGGATATTTAGCTCTCATATACGCTGC ] [-] EMBL CD127251 [ GTAGGTCATTAGAGAGTTGTTTGTAACCGATATCAGGTTTCTGAGATAGTTGAACAGCTAAATTAAAGGCGTTTTTAATTTTTTTCTGAACATTTTGGATCAGCATCACGATAGTCCTTAGTGACACTTTCAAAAAAGTCATGAAAATTCCCCTCGCCTGCAACCCATATAACTGGTGCACTTGAAGCTAAAGCACCTTTAATTATATGAGGATATTTAGCTCTCATATACGCTGCAAGCATGCCTCCATAGCTTCCACCAAATGCAACAACAAGGGATCTAGTCATGTTGAATGTGCTTTTGATACCTTCAATTAAATAAGAATAATCTGCTAATGac ] [+] EMBL CD127370 [ GTTGTTTGTAACCGATATCAGGTTTCTGAGATAGTTGAACAGCTAAATTAAAGGCGTTTTTAA TTTTTTCTGAACATTTTGGATCAGCATCACGATAGTCCTTAGTGACACTTTCAAAAAAGTCATGAAAATTCCCCTCGCCTGCAACCCATCTAACTGGTGCACTTGAAGCTAAAGCACCTTTAATTATATGAGGATATTTAGCTCTCATATACGCTGCAAGCATGCCTCCATAGCTTCCACCAAATGCAACAACAAGGGATCTAGTCATGTTGAATGTACTTTTGATACCTTCAATTAAATAAGCATAATCTGCTAATGCTTGGTCAATTGAAAGGTATTGAATATATGGCTGCTGGAAGCTTGTATTAAATGGGAGACTTTTCCCATAGTATCTATGTTCAGCAAACAGGACGAAAGCATTGAAACTAGGTGCTAATTCGAATATTAGCCCTGTATTGTTCCAGAAAC ] [-] EMBL CD127319 [ TTGTTTGTAACCGATATCAGGTTTCTGAGATAGTTGAACAGCTAAATTAAAGGCG TTTTAA TTTTTTCTGAACATTTTGGATCAGCATCACGATAGTCCTTAGTGACACTTTCAAAAAAGTCATGAAAATTCCCCTCGCCTGCAACCCATCTAACTGGTGCACTTGAAGCTAAAGCACCTTTAATTATATGAGGATATTTAGCTCTCATATACGCTGCAAGCATGCCTCCATAGCTTCCACCAAATGCAACAACAAGGGATCTAGTCATGTTGAATGTACTTTTGATACCTTCAATTAAATAAGCATAATCTGCTAATGCTTGGTCAATTGAAAGGTATTGAATATATGGCTGCTGGAAGCTTGTATTAAATGGGAGACTTTTCCCATAGTATCTATGTTCAGCAAACAGGACGAAAGCATTGAAACTAGGTGCTAATTCGAATATTAGCCCTGTATTGTTCCAGAAACC ] [-] EMBL CD061871 [ TTGAATGTACTTTTGATACCTTCAATTAAATAAGCATAATCTGCTAATGCTTGGTCAATTGAAAGGTATTGAATATATGGCTGCTGGAAGCTTGTATTAAATGGGAGACTTTTCCCATAGTATCTATGTTCAGCAAACAGGACGAAAGCATTGAAACTAGGTGCTAATTCGAATATTAGCCCTGTATTGTTCCAGAAACCATCGATTCCTCCTTCGTTTCCACAATAAAAGAAGATGGGTCCGTTTGGTTTGAACCATTTATCTTCATACAGGTACCGCTGTTTGAAGGTCAGGTTTCTTGCTTGAAAATTAAAGTGATCCAAAGTTTGATCAAAATAGTTTTCTTTCGGTGGC ] [+] EMBL CD111409 [ GAATATTAGCCCTGTATTGTTCCAGAAACCATCGATTCCTCCTTCGTTTCCACAATAAAAGAGGATGGGTCCGTTTGGTTTGAACCATTTATCTTCATACAGGTACCGCTGTTTGAAAGTCAGGTTTCTTGCTTGAAAATTAAAGTGATCCAAAGTTTGATCAAAATAGTTTTCTTTCGGTGGCCACGGTATGGATGACGATGAGACATATAAAGTGCAAACAAACAGGAAGAATTGCAAAACAGGGTTTTGATGAACCATGAACCCAAGAGCTGCCTCCAC] [+] EMBL CD062213 [ AAGAA ATGGGTCCGTTTGGTTTGAACCATTTATCTTCATACAGGTACCGCTGTTTGAAAGTCAGGTTTCTTGCTTGAAAATTAAAGTGATCCAAAGTTTGATCAAAATAGTTTTCTTTCGGTGGCCACGGTATGGATGACGATGAGACATATAAAGTGCAAACAAACAGGAAGAATTGCAAAAC ] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||