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Schistosoma mansoni
cluster # 10265 cluster # 10265       Sequences # 14       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10265#0 length = 897 sequences # 12  
consensus_10265#1 length = 691 sequences # 1  
consensus_10265#2 length = 250 sequences # 1  

consensusID : consensus_10265#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 12
consensus length = 897
fasta sequence
                              [ATAGCGCCGAAGACAAAGCTCTCCCAGTAATGGACTATTATACTCAAGAAGTTCAAAGTTCTTCGTCAAAACCAGAGTTTGTTCGTTTTTGCGAAGTGAAGACACAACATTTTTACGATGTACTGACCCCTTATGCAGTCGGAAGATGGTGCTTTACTGTCCTTCTAATCTTCTTCTATATAATACGTATTATCATCACACAGGGCTATCACGTAGTCACTTATGTGATGGGAATATTTCTTTTGAACAGGCTAATTGATTTTCTTTCGCCCAAAATCGTACCTGAGACGTCCACTGATGAAGTGCTTCCAACCAAGTCGTCGGAAGAGTTTAGGCC-TTTTTTAAGGAAATTGCCTGAACTAAAGTTTTGGAACTCATGTACCATATGTTTACTTATATCTATATTCTGTACATTTTTGAGCTTTCTCGATGTACCTGTGTTTTGGCCGATTCTAGTGATGTACTTCGTCTTGCTGTTTTACGTGACTATGAAACGTCAAATATCGCATATGATCAAATACCGTTATTTACCATTTACCTATGGGAAACCACGTCATCAGTCCAATGGAATGAAATTTTAAAATGGATTCAACTTATACACATTTACAATATGTAAACAAAATTTGAAA-TT-T-TGTTATGCATCATCGTTCTAAACGATTCAGTACTTATTTTTATGTACTGCTTTTTGTACTTCTTGTGATGAATCCTACTCGTTCCTCTGAGTATATATATATAATGCGCAGTTTCCTACTTAAAGTATACACTTGATTTATGCTTAGAAACAGATGTAAAAAAATAACAT-AGTTGAATTTAATCAAATTTCTATTTGCATGTCTTTCTTTTACTTGTC-A--TTC-T-CCTGTTTTCTGC-TTATTTCACAAGAATTTAAAATCTCAAAAA]

[+] EMBL CD079431             [ATAGCGCCGAAGACAAAGCTCTCCCAGTAATGGACTATTATACTCAAGAAGTTCAAAGTTCTTCGTCAAAACCAGAGTTTGTTCGTTTTTGCGAAGTGAAGACACAACATTTTTACGATGTACTGACCCCTTATGCAGTCGGAAGATGGTGCTTTACTGTCCTTCTAATCTTCTTCTATATAATACGTATTATCATCACACAGGGCTATCACGTAGTCACTTATGTGATGGGAATATTTCTTTTGAACAGGCTAATTGATTTTCTTTCGCCCAAAATCGTACCTGAGACGTCCACTGATGAAGTGCTTCCAACCAAGTCGTCGGAAGAGTTTAGGCC TTTTTTAAGGAAATTGCCTGAACTAAAGTTTTGGAACTCATGTACCATATGTTTACTTATATCTATATTCTGTACATTTTTGAGCTTTCTCGATGTACCTGTGTTTTGGCCGATTCTAGTGATGTACTTCGTCTTGCTGTTTTACGTGACTATGAAACGTCAAATATCGCATATGATCAAATACCGTTATTTACCATTTACCTATGGGAAACCACGTCATCAGTCCAATGGAATGAAATTTTAAAATGGATTCAACTTATACACATTTACAATATGTAAACAAAATTTGAAA TT N TGTTATGCATCATCGTTCTAAACGATTCAGTACTTATTTTTATGTACTGCTTTTTGTACTTCTTGNGATGAATCCTACTCGNTCCTCTGAGTATATATATATAATGCGCAGNTTNCTACTT AAGTATACACTTGA TTATGCTTA AAACAGATGT AAAAAAT ACAT AGTTGAA TTAATC AATTNCTATTTGCATG C TTCTTTTAC TGNC A   TC T NCTG GTCCTGC TTA  TCACAg                   ]
[+] EMBL CD179231             [        GAAGACAAAGCTCTCCCAGTAATGGACTATTATACTCAAGAAGTTCAAAGTTCTCCGTCAAAACCAGAGTTTGTTCGTTTTTGCGAAGTGAAGACACAACATTTTTACGATGTACTGACCCCTTATGCAGTCGGAAGATGGTGCTTTACTGGCCTTCTAATCTTCTTCTATATAATACGTATTATCATCACACAGGGCTATCACGTAGTCACTTATGTGATGGGAATATTTCTTTTGAACAGGCTAATTGATTTTCTTTCGCCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL AI067815             [              AAAGCTCTCCCAGTAATGGACTATTATACTCAAGAAGTTCAAAGTTCTTCGTCAAAACCAGAGTTTGTTCGTTTTTGCGAAGTGAAGACACAACATTTTTACGATGTACTGACCCCTTATGCAGTCGGAAGATGGTGCTTTACTGTCCTTCTAATCTTCTTCTATATAATACGTATTATCATCACACAGGGCTATCACGTAGTCACTTATGTGATGGGAATATTTCTTTTGAACAGGCTAATTGATTTTCTTTCGCCCAAAATCGTACCTGAGACGTCCACTGATGAAGTGCTTCCAACCAAGTCGTCGGAAGAGTTTAGGCC TTTTTTAAGGAAATTGCCTGAACTAAAGTTTTGGAACTCATGTACCATATGTTTACTTATATCTATATTCTGTACATTTTTGAGCTTTCTCGATGTACCTGTGTTTTGGCCGATTCTAGTGATGTACTTCGTCT                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CD082471             [                          gaggTGGACTATTATACTCAAGAAGTTC AAGTTCTTCGTCAAAACCAGAGTTTGTTCGTTTTTGCGAAGTGAAGACACAACATTTTTACGATGTACTGACCCCTTATGCAGTCGGAAGATGGTGCTTTACTGTCCTTCTAATCTTCTTCTATATAATACGTATTATCATCACACAGGGCTATCACGTAGTCACTTATGTGATGGGAATATTTCTTTTGAACAGGCTAATTGATTTTCTTTCGCCCAAAATCGTACCTGAGACGTCCACTGATGAAGTGCTTCCAACCAAGTCGTCGGAAGAGTTTAGGCC TTTTTTAAGGAAATTGCCTGAACTAAAGTTTTGGAACTCATGTACCATATGTTTACTTATATCTATATTCTGTACATTTTTGAGCTTTCTCGATGTACCTGTGTTTTGGCCGATTCTAGTGATGTACTTCGTCTTGCTGTTTTACGTGACTATGAAACGTCAAATATCGCATATGATCAAATACCGTTATTTACCATTTACCTATGGGAAACCACGTCATCAGTCCAATGGAATGAAATTTTAAAATGGATTCAACTTATACACATTTACAATATGTAAACAAAATTTGAAA TTCT TGTTATGCATCATCGTTCTAAACGATTCAGTACTTNATTTTATGTACTGCTTTTTGTACTTCATGTGATGAATCCTACTCGTTCCTCTGAGTATATATATATAATGCGCAGTTTGCTACTT AAGTATACACTTGATTTATGCTTAG AACAGATGTAAAAAAAT ACATGAG TGAAATT ATCAAA TTCTATTTGCATGGCTTACTTTTACTGGCA A  TNC TNCCTG GTTCTGC TTATTTCAC AGATTTTAAt          ]
[+] EMBL CD197601             [                                gatcATTATACTCAAGAAGTTCAAAGTTCTTCGTCAAAACCAGAGTTTGTTCGTTTTTGCGAAGT   GACACAACATTTTTACGATGTACTGACCCCTTATGCAGTCGGAAGATGGTGCTTTACTGTCCTTCTAATCTTCTTCTATATAATACGTATTATCATCACACAGGGCTATCACGTAGTCACTTATGTGATGGGAATATTTCTTTTGAACAGGCTAATTGATTTTCTTTCGCCCAAAATCGTACCTGAGACGTCCACTGATGAAGTGCTTCCAACCAAGTCGTCGGAAGAGTTTAGGCC TTTTTTAAGGAAATTGCCTGAACTAAAGTTTTGGAACTCATGTACCATATGTTTACTTATATCTATATTCTGTACATTTTTGAGCTTTCTCGATGTACCTGTGTTTTGGCCGATTCTAGTGATGTACTTCGTCTCGCTGTTTTACGTGACTATGAAACGTCA                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL AI067431             [                                                                                                                                                                                                                         CACTTATGTGATGGGAATATTTCTTTTGAACAGGCTAATTGATTTTCTTTCGCCCAAAATCGTACCTGAGACGTCCACTGATGAAGTGCTTCCAACCAAGTCGTCGGAAGAGTTTAGGCC TTTTTTAAGGAAATTGCCTGAACTAAAGTTTTGGAACTCATGTACCATATGTTTACTTATATCTATATTCTGTACATTTTTGAGCTTTCTCGATGTACCTGTGTTTTGGCCGATTCTAGTGATGTACTTCGTCTTGCTGTTTTACGTGACTATGAAACGTCAAATATCGCATATGATCAAATACCGTTATTTACCATTTACCTATGGGAAACCACGTCATCAGTCCAATGGAATGAAATTTTAAAATGGATTCAACTTATACACATTTACAATATGTAAACAAAATTTGAAATTT T TGTTATGCATCATCGTTCTAAACGATTCAGTACTTATTTTTATGTACTGCTTTTTGTACTTCCTGTGATGAATCCTACTCGTTCCTCTGAGTATATATATATAATGCGCAGTTTCCT                                                                                                                                                           ]
[+] EMBL AI067427             [                                                                                                                                                                                                                               TGTGATGGGAATATTTCTTTTGAACAGGCTAATTGATTTTCTTTCGCCCAAAATCGTACCTGAGACGTCCACTGATGAAGTGCTTCCAACCAAGTCGTCGGAAGAGTTTAGGCC TTTTTTAAGGAAATTGCCTGAACTAAAGTTTTGGAACTCATGTACCATATGTTTACTTATATCTATATTCTGTACATTTTTGAGCTTTCTCGATGTACCTGTGTTTTGGCCGATTCTAGTGATGTACTTCGTCTTGCTGTTTTACGTGACTATGAAACGTCAAATATCGCATATGATCAAATACCGTTATTTACCATTTACCTATGGGAAACCACGTCATCAGTCCAATGGAATGAAATTTTAAAATGGATTCAACTTATACACATTTACAATATGTAAACAAAATTTGAAA TT TNTGTTATGCATCATCGTTCTAAACGATTCAGTACTTATTTTTATGTACTGCTTTTTGTACTTCTTGTGATGAATCCTACTCGTTCCTCTGAGTATATA                                                                                                                                                                               ]
[-] EMBL CD073702             [                                                                                                                                                                                                                                        AATATTTCTTTTGAACAGGCTAATTGATTTTCTTTCGCCCAAAATCGTACCTGAGACGTCCACTGATGAAGTGCTTCCAACCAAGTCGTCGGAAGAGTTTAGGCC TTTTTTAAGGAAATTGCCTGAACTAAAGTTTTGGAACTCATGTACCATATGTTTACTTATATCTATATTCTGTACATTTTTGAGCTTTCTCGATGTACCTGTGTTTTGGCCGATTCTAGTGATGTACTTCGTCTTGCTGTTTTACGTGACTATGAAACGTCAAATATCGCATATGATCAAATACCGTTATTTACCATTTACCTATGGGAAACCACGTCATCAGTCCAATGGAATGAAATTTTAAAATGGATTCAACTTATACACATTTACAATATGTAAACAAAATTTGAAA TT T TGTTATGCATCATCGTTCTAAACGATTCAGTACTTATTTTTATGTACTGCTTTTTGTACTTCTTGTGATGAATCCTACTCGTTCCTCTGAGTATATATATATAATGCGCAGTTTCCTACTTAAAGTATACACTTGATTTATGCTTAGAAACAGATGTAAAAAAATAACAT AGTTGAATTTAATCAAATTTCTATTTGCATGTCTTTCTTTTACTTGTC AGTTTT T CCTGTTTTATGCATTATTTCACAAGAATTTAAAATCTCAAAAA]
[-] EMBL CD074832             [                                                                                                                                                                                                                                                                TGA TTTCTTTCGCCCAAAATCGTACCTGAGACGTCCACTGATGAAGTGCTTCCAACCAAGTCGTCGGAAGAGTTTAGGCCTTTTTTTAAGGAAATTGCCTGAACTAAAGTTTTGGAACTCATGTACCATATGTTTACTTATATCTATATTCTGTACATTTTTGAGCTTTCTCGATGTACCTGTGTTTTGGCCGATTCTAGTGATGTACTTCGTCTTGCTGTTTTACGTGACTATGAAACGTCAAATATCGCATATGATCAAATACCGTTATTTACCATTTACCTATGGGAAACCACGTCATCAGTCCAATGGAATGAAATTTTAAAATGGATTCAACTTATACACATTTACAATATGTAAACAAAATTTGAAATTT T TGTTATGCATCATCGTTCTAAACGATTCAGTACTTATTTTTATGTACTGCTTTTTGTACTTCTTGTGATGAATCCTACTCGTTCCTCTGAGTATATATATATAATGCGCAGTTTCCTACTTAAAGTATACACTTGATTTATGCTTAGAAACAGATGTAAAAAAATAACAT AGTTGAATTTAATCAAATTTCTATTTGCATGTCTTTCTTTTACTTGTCAA  TTCTT CCTGTTTTCTGCTTTATTTCACAAGAATTTAAAATCT      ]
[-] EMBL CD076070             [                                                                                                                                                                                                                                                                                                       TGATGAAGTGCTTCCAACCAAGTCGTCGGAAGAGTTTAGGCC TTTTTTAAGGAAATTGCCTGAACTAAAGTTTTGGAACTCATGTACCATATGTTTACTTATATCTATATTCTGTACATTTTTGAGCTTTCTCGATGTACCTGTGTTTTGGCCGATTCTAGTGATGTACTTCGTCTTGCTGTTTTACGTGACTATGAAACGTCAAATATCGCATATGATCAAATACCGTTATTTACCATTTACCTATGGGAAACCACGTCATCAGTCCAATGGAATGAAATTTTAAAATGGATTCAACTTATACACATTTACAATATGTAAACAAAATTTGAAATTT T TGTTATGCATCATCGTTCTAAACGATTCAGTACTTATTTTTATGTACTGCTTTTTGTACTTCTTGTGATGAATCCTACTCGTTCCTCTGAGTATATATATATAATGCGCAGTTTCCTACTTAAAGTATACACTTGATTTATGCTTAGAAACAGATGTAAAAAAATAACAT AGTTGAATTTAATCAAATTTCTATTTGCATGTCTTTCTTTTACTTGTCAA  TTCTT CCTGTTTTCTGCTTTATTTCACAAGAATTTAAAATCT      ]
[+] EMBL AI066973             [                                                                                                                                                                                                                                                                                                                          AAGTCGTCGGAAGAGTTTAGGCC TTTTTTAAGGAAATTGCCTGAACTAAAGTTTTGGAACTCATGTACCATATGTTTACTTATATCTATATTCTGTACATTTTTGAGCTTTCTCGATGTACCTGTGTTTTGGCCGATTCTAGTGATGTACTTCGTCGTGCTGTTTTAC                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL SMAA69044            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GATTCTAGTGATGTACTTCGTCTTGCTGTTTTACGTGACTATGAAACGTCAAATATCGCATATGATCAAATACC TTATTTACCATTTACCTATGGGAAACCACGTCATCAGTCCAATGGAATGAAATTTTAAAATGGATTCAACTTATACACATTTACAATATGTAAACAAAATTTNAAATTT T TGTTATGCATCATCGTTCTAAACGATTCAGTACTTATCTTTATGTACTGCTTTTTGTACTTCTTGTGA                                                                                                                                                                                                            ]


>consensus_10265#0 ATAGCGCCGAAGACAAAGCTCTCCCAGTAATGGACTATTATACTCAAGAAGTTCAAAGTT CTTCGTCAAAACCAGAGTTTGTTCGTTTTTGCGAAGTGAAGACACAACATTTTTACGATG TACTGACCCCTTATGCAGTCGGAAGATGGTGCTTTACTGTCCTTCTAATCTTCTTCTATA TAATACGTATTATCATCACACAGGGCTATCACGTAGTCACTTATGTGATGGGAATATTTC TTTTGAACAGGCTAATTGATTTTCTTTCGCCCAAAATCGTACCTGAGACGTCCACTGATG AAGTGCTTCCAACCAAGTCGTCGGAAGAGTTTAGGCCTTTTTTAAGGAAATTGCCTGAAC TAAAGTTTTGGAACTCATGTACCATATGTTTACTTATATCTATATTCTGTACATTTTTGA GCTTTCTCGATGTACCTGTGTTTTGGCCGATTCTAGTGATGTACTTCGTCTTGCTGTTTT ACGTGACTATGAAACGTCAAATATCGCATATGATCAAATACCGTTATTTACCATTTACCT ATGGGAAACCACGTCATCAGTCCAATGGAATGAAATTTTAAAATGGATTCAACTTATACA CATTTACAATATGTAAACAAAATTTGAAATTTTGTTATGCATCATCGTTCTAAACGATTC AGTACTTATTTTTATGTACTGCTTTTTGTACTTCTTGTGATGAATCCTACTCGTTCCTCT GAGTATATATATATAATGCGCAGTTTCCTACTTAAAGTATACACTTGATTTATGCTTAGA AACAGATGTAAAAAAATAACATAGTTGAATTTAATCAAATTTCTATTTGCATGTCTTTCT TTTACTTGTCATTCTCCTGTTTTCTGCTTATTTCACAAGAATTTAAAATCTCAAAAA



consensusID : consensus_10265#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 691
fasta sequence
                              [AGACAAGCTCTCCCAGTAATGGACTATTATACTCAAGAAGTTTGTTCGTTTTTGCGAAGTGAAGACACAACATTTTTACGATGTACTGACCCCTTATGCAGTCGGAAGATGGTGCTTTACTGTCCTTCTAATCTTCTTCTATATAATACGTATTATCATCACACAGGGNNNNNNNNNNNNNNNNNNNNNNNNGGGAATATTTCTTTTGAACAGGCTAATTGATTTTCTTTCGCCCAAAATCGTACCTGAGACGTCCACTGATGAAGTGCTTCCAACCAAGTCGTCGGAAGAGTTTAGGCCTTTTTTTAAGGAAATTGCCTGAACNNNNNNNNNNNNNNNNNNNNNCCATATGTTTACTTATATCTATATTCTGTACATTTTTGAGCTTTCTCGATGTACCTGTGTTTTGGCCGATTCTAGTGATGTACTTCGTCTTGCTGTTTTACGTGACTATGAAACGTCAAATATCGCATATGATCAAATACCGTTATTTACCATTTACCTATGGNNNACCACGTCATCAGTCCAATGGAATGAAATTTTAAAATGGATTCAACTTATACACATTTACAATATGTAAACAAAATTTGAAATTTTTGTTATGCATCATCGTTCTAAACGATTCAGTACTTATTTTTATGTACTGCTTTTTGTACTTCTTGTGATGAATCCTACTACTTAAGTATACACT]

[+] EMBL CD081006             [AGACAAGCTCTCCCAGTAATGGACTATTATACTCAAGAAGTTTGTTCGTTTTTGCGAAGTGAAGACACAACATTTTTACGATGTACTGACCCCTTATGCAGTCGGAAGATGGTGCTTTACTGTCCTTCTAATCTTCTTCTATATAATACGTATTATCATCACACAGGGNNNNNNNNNNNNNNNNNNNNNNNNGGGAATATTTCTTTTGAACAGGCTAATTGATTTTCTTTCGCCCAAAATCGTACCTGAGACGTCCACTGATGAAGTGCTTCCAACCAAGTCGTCGGAAGAGTTTAGGCCTTTTTTTAAGGAAATTGCCTGAACNNNNNNNNNNNNNNNNNNNNNCCATATGTTTACTTATATCTATATTCTGTACATTTTTGAGCTTTCTCGATGTACCTGTGTTTTGGCCGATTCTAGTGATGTACTTCGTCTTGCTGTTTTACGTGACTATGAAACGTCAAATATCGCATATGATCAAATACCGTTATTTACCATTTACCTATGGNNNACCACGTCATCAGTCCAATGGAATGAAATTTTAAAATGGATTCAACTTATACACATTTACAATATGTAAACAAAATTTGAAATTTTTGTTATGCATCATCGTTCTAAACGATTCAGTACTTATTTTTATGTACTGCTTTTTGTACTTCTTGTGATGAATCCTACTACTTAAGTATACACT]


>consensus_10265#1 AGACAAGCTCTCCCAGTAATGGACTATTATACTCAAGAAGTTTGTTCGTTTTTGCGAAGT GAAGACACAACATTTTTACGATGTACTGACCCCTTATGCAGTCGGAAGATGGTGCTTTAC TGTCCTTCTAATCTTCTTCTATATAATACGTATTATCATCACACAGGGNNNNNNNNNNNN NNNNNNNNNNNNGGGAATATTTCTTTTGAACAGGCTAATTGATTTTCTTTCGCCCAAAAT CGTACCTGAGACGTCCACTGATGAAGTGCTTCCAACCAAGTCGTCGGAAGAGTTTAGGCC TTTTTTTAAGGAAATTGCCTGAACNNNNNNNNNNNNNNNNNNNNNCCATATGTTTACTTA TATCTATATTCTGTACATTTTTGAGCTTTCTCGATGTACCTGTGTTTTGGCCGATTCTAG TGATGTACTTCGTCTTGCTGTTTTACGTGACTATGAAACGTCAAATATCGCATATGATCA AATACCGTTATTTACCATTTACCTATGGNNNACCACGTCATCAGTCCAATGGAATGAAAT TTTAAAATGGATTCAACTTATACACATTTACAATATGTAAACAAAATTTGAAATTTTTGT TATGCATCATCGTTCTAAACGATTCAGTACTTATTTTTATGTACTGCTTTTTGTACTTCT TGTGATGAATCCTACTACTTAAGTATACACT



consensusID : consensus_10265#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 250
fasta sequence
                              [CCGAAAAGAAGAGCGGTTAATCAAAGCCAAACTTAAGTTAGATTCGTTAAGGCTATCACGTAGTCACTTATGTGATGGGAATATTTCTTTTGAACAGGCTAATTGATTTTCTTTCGCCCAAAATCGTACCTGAGACGTCCACTGATGAAGTGCTTCCAACCAAGTCGTCGGAAGAGTTTAGGCCTTTTTTAAGGAAATTGCCTGAACTAAAGTTTTGGAACTCATGTACCATATGTTTACTTATATCTAT]

[+] EMBL CD078120             [CCGAAAAGAAGAGCGGTTAATCAAAGCCAAACTTAAGTTAGATTCGTTAAGGCTATCACGTAGTCACTTATGTGATGGGAATATTTCTTTTGAACAGGCTAATTGATTTTCTTTCGCCCAAAATCGTACCTGAGACGTCCACTGATGAAGTGCTTCCAACCAAGTCGTCGGAAGAGTTTAGGCCTTTTTTAAGGAAATTGCCTGAACTAAAGTTTTGGAACTCATGTACCATATGTTTACTTATATCTAT]


>consensus_10265#2 CCGAAAAGAAGAGCGGTTAATCAAAGCCAAACTTAAGTTAGATTCGTTAAGGCTATCACG TAGTCACTTATGTGATGGGAATATTTCTTTTGAACAGGCTAATTGATTTTCTTTCGCCCA AAATCGTACCTGAGACGTCCACTGATGAAGTGCTTCCAACCAAGTCGTCGGAAGAGTTTA GGCCTTTTTTAAGGAAATTGCCTGAACTAAAGTTTTGGAACTCATGTACCATATGTTTAC TTATATCTAT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10265#0      ATAGCGCCGAAGACAAAGCTCTCCCAGTAATGGACTATTATACTCAAGAAGTTCAAAGTT 60
consensus_10265#1      ----------AGACAA-GCTCTCCCAGTAATGGACTATTATACTCAAGAAGTT------- 42
consensus_10265#2      ------------------------------------------------------------
                                                                                   

consensus_10265#0      CTTCGTCAAAACCAGAGTTTGTTCGTTTTTGCGAAGTGAAGACACAACATTTTTACGATG 120
consensus_10265#1      -------------------TGTTCGTTTTTGCGAAGTGAAGACACAACATTTTTACGATG 83
consensus_10265#2      ------------------------------------------------------------
                                                                                   

consensus_10265#0      TACTGACCCCTTATGCAGTCGGAAGATGGTGCTTTACTGTCCTTCTAATCTTCTTCTATA 180
consensus_10265#1      TACTGACCCCTTATGCAGTCGGAAGATGGTGCTTTACTGTCCTTCTAATCTTCTTCTATA 143
consensus_10265#2      ------------------CCGAAAAGAAGAGCG-----GTTAATCAAAGCCAAACTTAAG 37
                                          ** **    * **      **   ** ** *      **  

consensus_10265#0      TAATACGTATTATCATCACACAGGGCTATCACGTAGTCACTTATGTGATGGGAATATTTC 240
consensus_10265#1      TAATACGTATTATCATCACACAGGGNNNNNNNNNNNNNNNNNNNNNNNNGGGAATATTTC 203
consensus_10265#2      TTAGATTCGTTA----------AGGCTATCACGTAGTCACTTATGTGATGGGAATATTTC 87
                       * * *    ***           **                        ***********

consensus_10265#0      TTTTGAACAGGCTAATTGATTTTCTTTCGCCCAAAATCGTACCTGAGACGTCCACTGATG 300
consensus_10265#1      TTTTGAACAGGCTAATTGATTTTCTTTCGCCCAAAATCGTACCTGAGACGTCCACTGATG 263
consensus_10265#2      TTTTGAACAGGCTAATTGATTTTCTTTCGCCCAAAATCGTACCTGAGACGTCCACTGATG 147
                       ************************************************************

consensus_10265#0      AAGTGCTTCCAACCAAGTCGTCGGAAGAGTTTAGGCCTTTTTT-AAGGAAATTGCCTGAA 359
consensus_10265#1      AAGTGCTTCCAACCAAGTCGTCGGAAGAGTTTAGGCCTTTTTTTAAGGAAATTGCCTGAA 323
consensus_10265#2      AAGTGCTTCCAACCAAGTCGTCGGAAGAGTTTAGGCCTTTTTT-AAGGAAATTGCCTGAA 206
                       ******************************************* ****************

consensus_10265#0      CTAAAGTTTTGGAACTCATGTACCATATGTTTACTTATATCTATATTCTGTACATTTTTG 419
consensus_10265#1      CNNNNNNNNNNNNNNNNNNNNNCCATATGTTTACTTATATCTATATTCTGTACATTTTTG 383
consensus_10265#2      CTAAAGTTTTGGAACTCATGTACCATATGTTTACTTATATCTAT---------------- 250
                       *                     **********************                

consensus_10265#0      AGCTTTCTCGATGTACCTGTGTTTTGGCCGATTCTAGTGATGTACTTCGTCTTGCTGTTT 479
consensus_10265#1      AGCTTTCTCGATGTACCTGTGTTTTGGCCGATTCTAGTGATGTACTTCGTCTTGCTGTTT 443
consensus_10265#2      ------------------------------------------------------------
                                                                                   

consensus_10265#0      TACGTGACTATGAAACGTCAAATATCGCATATGATCAAATACCGTTATTTACCATTTACC 539
consensus_10265#1      TACGTGACTATGAAACGTCAAATATCGCATATGATCAAATACCGTTATTTACCATTTACC 503
consensus_10265#2      ------------------------------------------------------------
                                                                                   

consensus_10265#0      TATGGGAAACCACGTCATCAGTCCAATGGAATGAAATTTTAAAATGGATTCAACTTATAC 599
consensus_10265#1      TATGGNNNACCACGTCATCAGTCCAATGGAATGAAATTTTAAAATGGATTCAACTTATAC 563
consensus_10265#2      ------------------------------------------------------------
                                                                                   

consensus_10265#0      ACATTTACAATATGTAAACAAAATTTGAAATTTT-GTTATGCATCATCGTTCTAAACGAT 658
consensus_10265#1      ACATTTACAATATGTAAACAAAATTTGAAATTTTTGTTATGCATCATCGTTCTAAACGAT 623
consensus_10265#2      ------------------------------------------------------------
                                                                                   

consensus_10265#0      TCAGTACTTATTTTTATGTACTGCTTTTTGTACTTCTTGTGATGAATCCTACTCGTTCCT 718
consensus_10265#1      TCAGTACTTATTTTTATGTACTGCTTTTTGTACTTCTTGTGATGAATCCTACTACTT--- 680
consensus_10265#2      ------------------------------------------------------------
                                                                                   

consensus_10265#0      CTGAGTATATATATATAATGCGCAGTTTCCTACTTAAAGTATACACTTGATTTATGCTTA 778
consensus_10265#1      --AAGTATACACT----------------------------------------------- 691
consensus_10265#2      ------------------------------------------------------------
                                                                                   

consensus_10265#0      GAAACAGATGTAAAAAAATAACATAGTTGAATTTAATCAAATTTCTATTTGCATGTCTTT 838
consensus_10265#1      ------------------------------------------------------------
consensus_10265#2      ------------------------------------------------------------
                                                                                   

consensus_10265#0      CTTTTACTTGTCATTCTCCTGTTTTCTGCTTATTTCACAAGAATTTAAAATCTCAAAAA 897
consensus_10265#1      -----------------------------------------------------------
consensus_10265#2      -----------------------------------------------------------
                                                                                  




Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)