cluster # 10305

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Schistosoma mansoni
cluster # 10305 cluster # 10305 Sequences # 15 consensus # 5

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10305#0 length = 926 sequences # 4
consensus_10305#1 length = 872 sequences # 7

consensus_10305#2 length = 516 sequences # 2
consensus_10305#3 length = 496 sequences # 1
consensus_10305#4 length = 334 sequences # 1

consensusID : consensus_10305#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 926
fasta sequence

                              [CTCGAGCCAAGATTCGGCACGAGGAGTTTTGATGAATTCGGTAAACTTTTCAAGTATGTAAATGATTGGCAAAATTGTTTCCGACAATTTGATCGGGATAACTCCGGTTCAATTGACCGTCAAGAACTCAGTACTGCGTTGATGAGGT-TTGGTTATAACCTAT-CGCCACAATTTATAAATTTTATGGTTAGTCGCTTTGGTCGTAATCGTCGAGAATCTATTTCATTCGATGATTTTATTTATGCATGTGTCTGTTTACAAATTCTCACGGGAGCATTCAGACGATATGAC-TATAGAATGATTGGTCAAGC-TCAGTTTTCATTTGAACAGTTTCTTGCAGCAGCGTTTTCAGTTGTTATATAAGCTTCAAGTTCAAAAGAATCAGACTTACATTTTTCTATAACTACTGACTCTGGATTTTGTGACGTCCCTATCTACTTTTTCAAATAAGTGCTGTTAGCCTGTGTAATGTGTGATTTTGTACCATTTGTGGATATATTAAACTTGCTCTGATTATATGCTTTGTTCATTTTTTATACTATACCTTCTAATCTAAAGTTGCTTTATTTTGTTGGTATTGGCATTTTCTTTTTGTATTGCAAACCCAC-TAC-ATAATATACATACATTATTCATAATGTACATTTTTACTGGTTTCTTTTTAAAAAAAATTCTGAACAGTATTCTGAAAGAGTACCCCTAAATGAATATTATCTTTTTGTTATATTCAATTTTGTTCATTTTCTAAGAGTTCGCAGTTAACACGTATGAAATCACTATTTTTACAAACTTCAGTTCGATTGACCACTAGGCACTAGTGTTCACTCTAGTTCAACATTCTATTTTCCCTTTCTACATATAATCCTTAAAATGCTTTTTTTATGTTTTACCAATTGACAGAAGAGAATAAGATGGAAATAATACACTAT]

[+] EMBL CD080777             [CTCGAGCCAAGATTCGGCACGAGGAGTTTTGATGAATTCGGTAAACTTTTCAAGTATGTAAATGATTGGCAAAATTGTTTCCGACAATTTGATCGGGATAACTCCGGTTCAATTGACCGTCAAGAACTCAGTACTGCGTTGATGAGGT TTGGTTATAACCTAT CGCCACAATTTATAAATTTTATGGTTAGTCGCTTTGGTCGTAATCGTCGAGAATCTATTTCATTCGATGATTTTATTTATGCATGTGTCTGTTTACAAATTCTCACGGGAGCATTCAGACGATATGAC TATAGAATGATTGGTCAAGC TCAGTTTTCATTTGAACAGTTTCTTGCAGCAGCGTTTTCAGTTGTTATATAAGCTTCAAGTTCAAAAGAATCAGACTTACATTTTTCTATAACTACTGACTCTGGATTTTGTGACGTCCCTATCTACTTTTTCAAATAAGTGCTGTTAGCCTGTGTAATGTGTGATTTTGTACCATTTGTGGATATATTAAACTTGCTCTGATTATATGCTTTGTTCATTTTTTATACTATACCTTCTAATCTAAAGTTGCTTTATTTTGTTGGTATTGGCATTTTCTTTTTGTATTGCANACCCACTTAC ATAATATACATACATTATTCATAATGTACATTNTTACTGGTTTCTTTTT AAAAAAATTCTGAACAGTATTCTGAAAGAGTACCCCTAAA                                                                                                                                                                                                                                 ]
[+] EMBL CD081158             [                                                                                                                                            tggagGGTGTTGGTTATAACCTATNCGCCACAATTTATAAATTTTATGGTTAGTCGCTTTGGTCGTAATCGTCGAGAATCTATTTCATTCGATGATTTTATTTATGCATGTGTCTGTTTACAAATTCTCACGGGAGCATTCAGACGATATGAC TATAGAATGATTGGTCAAGC TCAGTTTTCATTTGAACAGTTTCTTGCAGCAGCGTTTTCAGTTGTTATATAAGCTTCAAGTTCAAAAGAATCAGACTTACATTTTTCTATAACTACTGACTCTGGATTTTGTGACGT CCTATCTA TTTTTC AATAAGTGCTGTTAGCCTGTG AATGTGTGA TTTGTACC TTTGTGG TATATTAAACTTGCTCTGA TATATGCTTTGTTCA TTTTTATACTATACCTTCTAATCTAAAG TG TTTATTTTGTTGG ATTGGCATTT  TTTTTG ATTGC AACCCA  TAC AT ATATAC TACt                                                                                                                                                                                                                                                                                                             ]
[-] EMBL SMAA40601            [                                                                                                                                                                                                                                                      CATGTGTCTGTTTACAAAATCTCACGGGGGCATTCAGACGATATGACTTATAGAATGATTGGTCAAGCNCCAGTTTTCATTTGAACAGTTTCTTGCAGCAGCGTTTTCAGTTGTTATATAAGCTTCAAGTTCAAAAGAATCAGACTTACATTTTTCTATAACTACTGACTCTGGATTTTGTGACGNCCCTATCTACTTTTTCAAATAAGTGCTGTTAGCCTGTGTAATGTGTGATTTTGTACCATTTGTGGATATATTAAACTTGCTCTGATTATATGCTTTGTTCATNTTTTATACTATACCTTCTAATCTAAAGTTGCTTTATTTTGTTGGTATTGGCATTTTCTTTTTGTATTGCAAACCCAC TACAATAATATACATACATTATTCATAATGTACATTTTTACTGGTTTCTTTTTAAAAAAAATTCTGAACAGTATTCTGAAAGAGTACCCCTAAATGAATATTAT                                                                                                                                                                                                                       ]
[-] EMBL CD074701             [                                                                                                                                                                                                                                                                                                                                                                                                            TTTTTCTATAACTACTGACTCTGGATTTTGTGACGTCCCTATCTACTTTTTCAAATAAGTGCTGTTAGCCTGTGTAATGTGTGATTTTGTACCATTTGTGGATATATTAAACTTGCTCTGATTATATGCTTTGTTCATTTTTTATACTATACCTTCTAATCTAAAGTTGCTTTATTTTGTTGGTATTGGCATTTTCTTTTTGTATTGCAAACCCCC TACAATAATATACATACATTATTCATAATGTACATTTTTACTGGTTTCTTTTTAAAAAAAATTTTGAACAGTATTTTGAAAGAGTACCCCTAAATGAATATTATCTTTTTGTTATATTCAATTTTGTTCATTTTCTAAGAGTTCGCAGTTAACACGTATGAAATCACTATTTTTACAAACTTCAGTTCGATTGACCACTAGGCACTAGTGTTCACTCTAGTTCAACATTCTATTTTCCCTTTCTACATATAATCCTTAAAATGCTTTTTTTATGTTTTACCAATTGACAGAAGAGAATAAGATGGAAATAATACACTAT]




>consensus_10305#0
CTCGAGCCAAGATTCGGCACGAGGAGTTTTGATGAATTCGGTAAACTTTTCAAGTATGTA
AATGATTGGCAAAATTGTTTCCGACAATTTGATCGGGATAACTCCGGTTCAATTGACCGT
CAAGAACTCAGTACTGCGTTGATGAGGTTTGGTTATAACCTATCGCCACAATTTATAAAT
TTTATGGTTAGTCGCTTTGGTCGTAATCGTCGAGAATCTATTTCATTCGATGATTTTATT
TATGCATGTGTCTGTTTACAAATTCTCACGGGAGCATTCAGACGATATGACTATAGAATG
ATTGGTCAAGCTCAGTTTTCATTTGAACAGTTTCTTGCAGCAGCGTTTTCAGTTGTTATA
TAAGCTTCAAGTTCAAAAGAATCAGACTTACATTTTTCTATAACTACTGACTCTGGATTT
TGTGACGTCCCTATCTACTTTTTCAAATAAGTGCTGTTAGCCTGTGTAATGTGTGATTTT
GTACCATTTGTGGATATATTAAACTTGCTCTGATTATATGCTTTGTTCATTTTTTATACT
ATACCTTCTAATCTAAAGTTGCTTTATTTTGTTGGTATTGGCATTTTCTTTTTGTATTGC
AAACCCACTACATAATATACATACATTATTCATAATGTACATTTTTACTGGTTTCTTTTT
AAAAAAAATTCTGAACAGTATTCTGAAAGAGTACCCCTAAATGAATATTATCTTTTTGTT
ATATTCAATTTTGTTCATTTTCTAAGAGTTCGCAGTTAACACGTATGAAATCACTATTTT
TACAAACTTCAGTTCGATTGACCACTAGGCACTAGTGTTCACTCTAGTTCAACATTCTAT
TTTCCCTTTCTACATATAATCCTTAAAATGCTTTTTTTATGTTTTACCAATTGACAGAAG
AGAATAAGATGGAAATAATACACTAT

consensusID : consensus_10305#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 872
fasta sequence

                              [TTCACGATTACAAAATACTCACTAGTTGAGTGCGGTTTACAGACTTTCCTCTGGGACTTTAGCAGATTATCTGGTGACAAGAAGCGAGTTATGGATCAGAACGCTTTGTGGAGTATATTCAGAAGAATTGACAAGAATGGGAGTGGAAATATAAGTGCTGATGAATTGCAATCTTGTCTATCGAACGGTCTAGGAACGATGTTCAACATAAGAACAGTACAGTTAATGATGTCAAT-GTTTGATTCTGATATGAATGGAACAATTAGTTTTGATGAATTCGGTAAACTTTTCAAGTATGTAAATGATTGGCAAAATTGTTTCCGACAATTTGATCGGGATAACTCCGGTTCAATTGACCGTCAAGAACTCAGTACTGCGTTGATGAGGTTTGGTTATAACCTATCGCCACAATTTATAAATTTTATGGTTAGTCGCTTTGGTCGTAATCGTCGAGAATCTATTTCATTCGATG-ATTTTATTTATGCATGTGTCTGTTTACAAATTCTCACGGGAGCATTCAGACGATATGACTATAGAATGATTGGTCAAGCTCAGTTTTCATTTGAACAGTTTCTTGCAGCAGCGTTTTCAGTTGTTATATAAGCTTCAAGTTCAAAAGAATCAGACTTCCATTTTTTTATAACTACTGACTCTGGATTTTGTGACGTCCCTATCTACTTTTTCAAATAAGTGCTGTTACCCTGTGTAATGTGTGATTTTGTCCCATTTGTGGATATATTAAACTTGCTCTGATTATATGCTTTGTTCATTTTTTATACTATCCCTTCTAATCTAAAGTTGCTTTATTTTGTTGGTATTGGCATTTTCTTTTTGTATGGCAAACCCCCTCCAATAATATACATCCTTTTTTC]

[+] EMBL AI976603             [TTCACGATTACAAAATACTCACTAGTTGAGTGCGGTTTACAGACTTTCCTCTGGGACTTTAGCAGATTATCTGGTGACAAGAAGCGAGTTATGGATCAGAACGCTTTGTGGAGTATATTCAGAAGAATTGACAAGAATGGGAGTGGAAATATAAGTGCTGATGAATTGCAATCTTGTCTATCGAACGGTCTAGGAACGATGTTCAACATAAGAACAGTACAGTTAATGATGTCAATGGTTTGATTCTGATATGAATGGAACAATTAGTTTTGATGAATTCGGTAAACTTTTCAAGTATGTAAATGATTGGCAAAATTGTTTCCGACAATTTGATCGGGATAACTCCGGTTCAATTGACCGTCAAGAACTCAGTACTGCGTTGATGAGGTTTGGTTATAACCTATCGCCACAATTTATAAATTTTATGGTTAGTCGCTTTGGTCGTAATCGTCGAGAATCTATTTCATTCGATG ATTTTATTTATGCATGTGTCTGGTTACAAATTCTCACGGGAGCATTCAGACGATATGACTATAGAATGA                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CD153416             [                                     TACAGACTTTCCTCTGGGACTTTAGCAGATTATCTGGTGACAAGAAGCGAGTTATGGATCAGAACGCTTTGTGGAGTATATTCAGAAGAATTGACAAGAATGGGAGTGGAAATATAAGTGCTGATGAATTGCAATCTTGTCTATCGAACGGTCTAGGAACGATGTTCAACATAAGAACAGTACAGTTAATGATGTCAAT GTTTGATTCTGATATGAATGGAACAATTAGTTTTGATGAATTCGGTAAACTTTTCAAGTATGTAAATGATTGGCAAAATTGTTTCCGACAATTTGATTGGGATAACTCCGGTTCAATTGACCGTCAAGAACTCAGTACTGCGTTGATGAGGTTTGGTTATAACCTATCGCCACAATTTATAAATTTTATGGTTAGTCGCTTTGGTCGTAATCGTCGAGAATCTATTTCATTCGATG ATTTTATTTATGCATGTGTCTGTTTACAAATTCTCACGGGAGCATTCAGACGATATGACTATAGAATGATTGGGACAGCTCAGTTTTCATTTGAA                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CD153428             [                                     TACAGACTTTCCTCTGGGACTTTAGCAGATTATCTGGTGACAAGAAGCGAGTTATGGATCAGAACGCTTTGTGGAGTATATTCAGAAGAATTGACAAGAATGGGAGTGGAAATATAAGTGCTGATGAATTGCAATCTTGTCTATCGAACGGTCTAGGAACGATGTTCAACATAAGAACAGTACAGTTAATGATGTCAAT GTTTGATTCTGATATGAATGGAACAATTAGTTTTGATGAATTCGGTAAACTTTTCAAGTATGTAAATGATTGGCAAAATTGTTTCCGACAATTTGATCGGGATAACTCCGGTTCAATTGACCGTCAAGAACTCAGTACTGCGTTGATGAGGTTTGGTTATAACCTATCGCCACAATTTATAAATTTTATGGTTAGTCGCTTTGGTCGTAATCGTCGAGAATCTATTTCATTCGATG ATTTTATTTATGCATGTGTCTGTTTACAAATTCTCACGGGAGCATTCAGACGATATGACTATAGAATGATTGGTCAAGCTCAGTTTTCATTTGAACAGTTTCTTGC                                                                                                                                                                                                                                                                                                      ]
[-] EMBL CD074975             [                                                                                                                                                                                            TCTAGGAACGATGTTCAACATAAGACCAGTCCAGTTAATGATGTCAAT GTTTGATTCTGATATGAATGGAACAATTAGTTTTGATGAATTCGGTAAACTTTTCAAGTATGTAAATGATTGGCAAAATTGTTTCCGACAATTTGATCGGGATAACTCCGGTTCAATTGACCGTCAAGAACTCAGTACTGCGTTGATGAGGTTTGGTTATAACCTATCGCCCCAATTTATAAATTTTATGGTTAGTCGCTTTGGTCGTAATCGTCGAGAATCTATTTCATTCGATG ATTTTATTTATGCATGTGTCTGTTTACAAATTCTCCCGGGAGCATTCAGACGATATGACTATAGAATGATTGGTCAAGCTCAGTTTTCATTTGAACAGTTTTTTGCAGCAGCGTTTTCAGTTGTTATATAAGCTTCAAGTTCAAAAGAATCAGACTTCCATTTTTTTATAACTACTGACTCTGGATTTTGTGACGTCCCTATCTACTTTTTCAAATAAGTGCTGTTACCCTGTGTAATGTGTGATTTTGTCCCATTTGTGGATATATTAAACTTGCTCTGATTATATGCTTTGTTCATTTTTTATACTATCCCTTCTAATCTAAAGTTGCTTTATTTTGTTGGTATTGGCATTTTCTTTTTGTATGGCAAACCCCCTCCAATAATATACATCCTTTTTTC]
[+] EMBL AA559394             [                                                                                                                                                                                                                                 ATGATGTCAAT GTTTGATTCTGATATGAATGGAACAATTAGTTTTGATGAATTCGGTAAACTTTTCAAGTATGTAAATGATTGGCAAAATTGTTTCCGACAATTTGATCGGGATAACTCCGGTTCAATTGACCGTCAAGAACTCAGTACTGCGTTGATGAGGTTTGGTTATAACCTATCGCCACAATTTATAAATTTTATGGTTAGTCGCTTTGGTCGTAATCGTCGAGAATCTATTTCATTCGATGAATTTTATTTATGCATGTGTCTGTTTACNAATTCTCACGGGAGCNTTCncaa                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL AI740299             [                                                                                                                                                                                                                                                          ATGAATGG ACAATTAGTTTTGATGAATTCGGTAAACTTTTCAAGTATGTAAATGATTGGCAAAATTGTTTCCGACAATTTGATCGGGATAACTCCGGTTCAATTGACCGTCAAGAACTCAGTACTGCGTTGATGAGGTTTGGTTATAACCTATCGCCACAATTTATAAATTTTATGGTTAGTCGCTTTGGTCGTAATCGTCGAGAATCTATTTCATTCGATG ATTTTATTTATGCATGTGTCTGTTTACAAATTCTCACGGGAGCATTCAGACGATATGACTATAGAATGATTGGTCAAGCTCAGTTTTCATTTGAACAGTTTCTTGCAGCAGCGTTTTCAGTTGTTATATAAGCTTCAAGTTCAAAAGAATCAGACTTACATTTTTCTATAACTA                                                                                                                                                                                                                                  ]
[+] EMBL SM9261               [                                                                                                                                                                                                                                                                                                                                                                                      CTGCGTTGATGAGGTTTGGTTATAACCTATCGCCACAATTTATAAATTTTATGGTTAGTCGCTTTGGTCGTAATCGTCGACAATCTATTTCATTCGATG ATTTTATTTATGCATGTGTCTGTTTACAAATTCTCACGGGAG                                                                                                                                                                                                                                                                                                                                                                      ]




>consensus_10305#1
TTCACGATTACAAAATACTCACTAGTTGAGTGCGGTTTACAGACTTTCCTCTGGGACTTT
AGCAGATTATCTGGTGACAAGAAGCGAGTTATGGATCAGAACGCTTTGTGGAGTATATTC
AGAAGAATTGACAAGAATGGGAGTGGAAATATAAGTGCTGATGAATTGCAATCTTGTCTA
TCGAACGGTCTAGGAACGATGTTCAACATAAGAACAGTACAGTTAATGATGTCAATGTTT
GATTCTGATATGAATGGAACAATTAGTTTTGATGAATTCGGTAAACTTTTCAAGTATGTA
AATGATTGGCAAAATTGTTTCCGACAATTTGATCGGGATAACTCCGGTTCAATTGACCGT
CAAGAACTCAGTACTGCGTTGATGAGGTTTGGTTATAACCTATCGCCACAATTTATAAAT
TTTATGGTTAGTCGCTTTGGTCGTAATCGTCGAGAATCTATTTCATTCGATGATTTTATT
TATGCATGTGTCTGTTTACAAATTCTCACGGGAGCATTCAGACGATATGACTATAGAATG
ATTGGTCAAGCTCAGTTTTCATTTGAACAGTTTCTTGCAGCAGCGTTTTCAGTTGTTATA
TAAGCTTCAAGTTCAAAAGAATCAGACTTCCATTTTTTTATAACTACTGACTCTGGATTT
TGTGACGTCCCTATCTACTTTTTCAAATAAGTGCTGTTACCCTGTGTAATGTGTGATTTT
GTCCCATTTGTGGATATATTAAACTTGCTCTGATTATATGCTTTGTTCATTTTTTATACT
ATCCCTTCTAATCTAAAGTTGCTTTATTTTGTTGGTATTGGCATTTTCTTTTTGTATGGC
AAACCCCCTCCAATAATATACATCCTTTTTTC

consensusID : consensus_10305#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 516
fasta sequence

                              [GGTTTACAGACTTTCCTCTGGGACTTTAGCAGATTATCTGGTGACAAGAAGCGAGTTATGGATCAGAACGCTTTGTGGAGTATATTCAGAAGAATTGACAAGAATGGGAGTGGAAATATAAGTGCTGATGAATTGCAATCTTGTCTATCGAACGGTCTAGGAACGATGTTCAACATAAGAACAGTACAGTTAATGATGTCAATGTTTGATTCTGATATGAATGGAACAATTAGTTTTGATGAATTCGGTAAACTTTTCAAGTATGTAAATGATTGGCAAAATTGTTTCCGACAATTTGATCGGGATAACTCCGGTTCAATTGACCGGTCAGAACTCAGTACTGCGTTGATGAGGTTTGGTTATACCTATCGCCCCAATTTTAATATTTATGGTAGTCGCCTTGGCGAAATCGCGGGAACTATTACATTCGGGATTTTATTATACATGGGGCTGTTACAATATCTCCGGGGGATTCAGACGATTAGCATATAGAAGATTGACACACACATTTTTTTT]

[+] EMBL AI723362             [GGTTTACAGACTTTCCTCTGGGACTTTAGCAGATTATCTGGTGACAAGAAGCGAGTTATGGATCAGAACGCTTTGTGGAGTATATTCAGAAGAATTGACAAGAATGGGAGTGGAAATATAAGTGCTGATGAATTGCAATCTTGTCTATCGAACGGTCTAGGAACGATGTTCAACATAAGAACAGTACAGTTAATGATGTCAATGTTTGATTCTGATATGAATGGAACAATTAGTTTTGATGAATTCGGTAAACTTTTCAAGTATGTAAATGATTGGCAAAATTGTTTCCGACAATTTGATCGGGATAACTCCGGTTCAATTGACCGGTCAGAACTCAGTACTGCGTTGATGAGGTTTGGTTATACCTATCGCCCCAATTTTAATATTTATGGTAGTCGCCTTGGCGAAATCGCGGGAACTATTACATTCGGGATTTTATTATACATGGGGCTGTTACAATATCTCCGGGGGATTCAGACGATTAGCATATAGAAGATTGACACACACATTTTTTTT]
[+] EMBL CD077939             [                                                                             GAGTATATTCAGAAGAATTGACAAGAATGGGAGTGGAAATATAAGTGCTGATGAATTGCAATCTTGTCTATCGAACGGTCTAGGAACGATGTTCAACATAAGAACAGTACAGTTAATGATGTCAATGTTTGATTCTGATATGAATGGAACAATTAGTTTTGATGAATTCGGTAAACTTTTCAAGTATGTAAATGATTGGCAAAATTGTTTCCGACATTTTGATC                                                                                                                                                                                                                       ]




>consensus_10305#2
GGTTTACAGACTTTCCTCTGGGACTTTAGCAGATTATCTGGTGACAAGAAGCGAGTTATG
GATCAGAACGCTTTGTGGAGTATATTCAGAAGAATTGACAAGAATGGGAGTGGAAATATA
AGTGCTGATGAATTGCAATCTTGTCTATCGAACGGTCTAGGAACGATGTTCAACATAAGA
ACAGTACAGTTAATGATGTCAATGTTTGATTCTGATATGAATGGAACAATTAGTTTTGAT
GAATTCGGTAAACTTTTCAAGTATGTAAATGATTGGCAAAATTGTTTCCGACAATTTGAT
CGGGATAACTCCGGTTCAATTGACCGGTCAGAACTCAGTACTGCGTTGATGAGGTTTGGT
TATACCTATCGCCCCAATTTTAATATTTATGGTAGTCGCCTTGGCGAAATCGCGGGAACT
ATTACATTCGGGATTTTATTATACATGGGGCTGTTACAATATCTCCGGGGGATTCAGACG
ATTAGCATATAGAAGATTGACACACACATTTTTTTT

consensusID : consensus_10305#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 496
fasta sequence

                              [TCAACATAAGAACAGTACAGTTAATGATGTCAATGTTTGATTCTGATATGAATGGAACAATTAGTTTTGATGAATTCGGTAAACTTTTCAAGTATGTAAATGATTGGCAAAATTGTTTCCGACAATTTGATCGGGATAACTCCGGTTCAATTGACCGTCAAGAACTCAGTACTGCGTTGATGAGGTTTGGTTATAACCTATCGCCACAATTTATAAATTTTATGATTCTCACGGGAGCATTCAGACGATGTGACTATAGAATGATTGGTCAAGCTCAGTTTTCATTTGAACAGTTTCTTGCAGCAGCGTTTTCAGTTGTTATATAAGCTTCAAGTTCAAAAGAATCAGACTTACATTTTTCTATAACTACTGACTCTGGATTTTGTGACGTCCCTATCTACTTTTTCAAATAAGTGCTGNTAGCCTGTGTAATGTGTGATCTTGTACCATGTGTGGATATATTAAACTTGCTCTGATTATATGCTTTGTTCATTTT]

[+] EMBL CD178987             [TCAACATAAGAACAGTACAGTTAATGATGTCAATGTTTGATTCTGATATGAATGGAACAATTAGTTTTGATGAATTCGGTAAACTTTTCAAGTATGTAAATGATTGGCAAAATTGTTTCCGACAATTTGATCGGGATAACTCCGGTTCAATTGACCGTCAAGAACTCAGTACTGCGTTGATGAGGTTTGGTTATAACCTATCGCCACAATTTATAAATTTTATGATTCTCACGGGAGCATTCAGACGATGTGACTATAGAATGATTGGTCAAGCTCAGTTTTCATTTGAACAGTTTCTTGCAGCAGCGTTTTCAGTTGTTATATAAGCTTCAAGTTCAAAAGAATCAGACTTACATTTTTCTATAACTACTGACTCTGGATTTTGTGACGTCCCTATCTACTTTTTCAAATAAGTGCTGNTAGCCTGTGTAATGTGTGATCTTGTACCATGTGTGGATATATTAAACTTGCTCTGATTATATGCTTTGTTCATTTT]




>consensus_10305#3
TCAACATAAGAACAGTACAGTTAATGATGTCAATGTTTGATTCTGATATGAATGGAACAA
TTAGTTTTGATGAATTCGGTAAACTTTTCAAGTATGTAAATGATTGGCAAAATTGTTTCC
GACAATTTGATCGGGATAACTCCGGTTCAATTGACCGTCAAGAACTCAGTACTGCGTTGA
TGAGGTTTGGTTATAACCTATCGCCACAATTTATAAATTTTATGATTCTCACGGGAGCAT
TCAGACGATGTGACTATAGAATGATTGGTCAAGCTCAGTTTTCATTTGAACAGTTTCTTG
CAGCAGCGTTTTCAGTTGTTATATAAGCTTCAAGTTCAAAAGAATCAGACTTACATTTTT
CTATAACTACTGACTCTGGATTTTGTGACGTCCCTATCTACTTTTTCAAATAAGTGCTGN
TAGCCTGTGTAATGTGTGATCTTGTACCATGTGTGGATATATTAAACTTGCTCTGATTAT
ATGCTTTGTTCATTTT

consensusID : consensus_10305#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 334
fasta sequence

                              [TGAAGCAACCGAAAAAGAGGAAATCAAGGGGACATTCCGTTGCAACGTCAAAAAGTTTATCAGAGTAGTAGTTAACTGTTTGTTTCAAGCAAACTACAACATGGGACTAACGTGATGTAGATTTTACTCTGAAAACAATACCATTTAAATAAAGACAATTAAATTAACTCACCGTTCGATAGACAAGATTGCAATTCATCAGCACTTATATTTCCACTCCCATTCTTGTCAATTCTGAAGGTATTTCAACATATATCATACCACTGTCTACCTTCTGAATATACTCCACAAAGCGTTCTGATCCATAACTCGCTTCTTGTCACCAGATAATCTG]

[+] EMBL CD193956             [TGAAGCAACCGAAAAAGAGGAAATCAAGGGGACATTCCGTTGCAACGTCAAAAAGTTTATCAGAGTAGTAGTTAACTGTTTGTTTCAAGCAAACTACAACATGGGACTAACGTGATGTAGATTTTACTCTGAAAACAATACCATTTAAATAAAGACAATTAAATTAACTCACCGTTCGATAGACAAGATTGCAATTCATCAGCACTTATATTTCCACTCCCATTCTTGTCAATTCTGAAGGTATTTCAACATATATCATACCACTGTCTACCTTCTGAATATACTCCACAAAGCGTTCTGATCCATAACTCGCTTCTTGTCACCAGATAATCTG]




>consensus_10305#4
TGAAGCAACCGAAAAAGAGGAAATCAAGGGGACATTCCGTTGCAACGTCAAAAAGTTTAT
CAGAGTAGTAGTTAACTGTTTGTTTCAAGCAAACTACAACATGGGACTAACGTGATGTAG
ATTTTACTCTGAAAACAATACCATTTAAATAAAGACAATTAAATTAACTCACCGTTCGAT
AGACAAGATTGCAATTCATCAGCACTTATATTTCCACTCCCATTCTTGTCAATTCTGAAG
GTATTTCAACATATATCATACCACTGTCTACCTTCTGAATATACTCCACAAAGCGTTCTG
ATCCATAACTCGCTTCTTGTCACCAGATAATCTG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10305#0      ------------------------------------------------------------
consensus_10305#3      ------------------------------------------------------------
consensus_10305#1      TTCACGATTACAAAATACTCACTAGTTGAGTGCGGTTTACAGACTTTCCTCTGGGACTTT 60
consensus_10305#2      ---------------------------------GGTTTACAGACTTTCCTCTGGGACTTT 27
consensus_10305#4      ------------------------------------------------------------
                                                                                   

consensus_10305#0      ------------------------------------------------------------
consensus_10305#3      ------------------------------------------------------------
consensus_10305#1      AGCAGATTATCTGGTGACAAGAAGCGAGTTATGGATCAGAACGCTTTGTGGAGTATATTC 120
consensus_10305#2      AGCAGATTATCTGGTGACAAGAAGCGAGTTATGGATCAGAACGCTTTGTGGAGTATATTC 87
consensus_10305#4      ------------------------------------------------------------
                                                                                   

consensus_10305#0      ------------------------------------------------------------
consensus_10305#3      ------------------------------------------------------------
consensus_10305#1      AGAAGAATTGACAAGAATGGGAGTGGAAATATAAGTGCTGATGAATTGCAATCTTGTCTA 180
consensus_10305#2      AGAAGAATTGACAAGAATGGGAGTGGAAATATAAGTGCTGATGAATTGCAATCTTGTCTA 147
consensus_10305#4      ------------------------------------------------------------
                                                                                   

consensus_10305#0      ---------------------------------------------------------CTC 3
consensus_10305#3      ----------------------TCAACATAAGAACAGTACAGTTAATGATGTCAATGTTT 38
consensus_10305#1      TCGAACGGTCTAGGAACGATGTTCAACATAAGAACAGTACAGTTAATGATGTCAATGTTT 240
consensus_10305#2      TCGAACGGTCTAGGAACGATGTTCAACATAAGAACAGTACAGTTAATGATGTCAATGTTT 207
consensus_10305#4      ------------------------------------------------------------
                                                                                   

consensus_10305#0      GAGCCAAGATT---CGGCACGAGGAGTTTTGATGAATTCGGTAAACTTTTCAAGTATGTA 60
consensus_10305#3      GATTCTGATATGAATGGAACAATTAGTTTTGATGAATTCGGTAAACTTTTCAAGTATGTA 98
consensus_10305#1      GATTCTGATATGAATGGAACAATTAGTTTTGATGAATTCGGTAAACTTTTCAAGTATGTA 300
consensus_10305#2      GATTCTGATATGAATGGAACAATTAGTTTTGATGAATTCGGTAAACTTTTCAAGTATGTA 267
consensus_10305#4      ------------------------------------------------------------
                                                                                   

consensus_10305#0      AATGATTGGCAAAATTGTTTCCGACAATTTGATCGGGATAACTCCGGTTCAATTGACCGT 120
consensus_10305#3      AATGATTGGCAAAATTGTTTCCGACAATTTGATCGGGATAACTCCGGTTCAATTGACCGT 158
consensus_10305#1      AATGATTGGCAAAATTGTTTCCGACAATTTGATCGGGATAACTCCGGTTCAATTGACCGT 360
consensus_10305#2      AATGATTGGCAAAATTGTTTCCGACAATTTGATCGGGATAACTCCGGTTCAATTGACCGG 327
consensus_10305#4      ------TGAAGCAACCGAAAAAGAGGAAATCAAGGGGACA-TTCCGTTGCAA-----CGT 48
                             **    **  *     **  *  * *  **** *  **** * ***     ** 

consensus_10305#0      CAAGAA-CTCAGTACTGCGTTGATGAG--GTTTGGTTATAACCTATCGCCACAATTTATA 177
consensus_10305#3      CAAGAA-CTCAGTACTGCGTTGATGAG--GTTTGGTTATAACCTATCGCCACAATTTATA 215
consensus_10305#1      CAAGAA-CTCAGTACTGCGTTGATGAG--GTTTGGTTATAACCTATCGCCACAATTTATA 417
consensus_10305#2      TCAGAA-CTCAGTACTGCGTTGATGAG--GTTTGGTTATA-CCTATCGCCCCAATTT-TA 382
consensus_10305#4      CAAAAAGTTTATCAGAGTAGTAGTTAACTGTTTGTTTCAAGCAAACTACAACATGGGACT 108
                         * **  * *  *  *   *  * *   ***** **  * *  *   *  **       

consensus_10305#0      AATTTTATGGTTAGTCGCTTTGGTCGTAATCGTCGAGAATCTATTTCATTCGATGATTTT 237
consensus_10305#3      AATTTTATG--------------------------------------------------- 224
consensus_10305#1      AATTTTATGGTTAGTCGCTTTGGTCGTAATCGTCGAGAATCTATTTCATTCGATGATTTT 477
consensus_10305#2      ATATTTATGGT-AGTCGCCTTGG-CGAAATCG-CGGGAA-CTATTACATTCGG-GATTTT 437
consensus_10305#4      AACGTGATG--------------------------------------------------- 117
                       *   * ***                                                   

consensus_10305#0      ATTTATGCATGTGTCTGTTTACAAATTCTCACGGGAGCATTCAGACGATATGACTATAGA 297
consensus_10305#3      ------------------------ATTCTCACGGGAGCATTCAGACGATGTGACTATAGA 260
consensus_10305#1      ATTTATGCATGTGTCTGTTTACAAATTCTCACGGGAGCATTCAGACGATATGACTATAGA 537
consensus_10305#2      ATT-ATACATGGGGCTGTT-ACAATATCTC-CGGGGG-ATTCAGACGATTAGCATATAGA 493
consensus_10305#4      ---------------------TAGATTTTACTCTGAA-AACAATACCATTTAAATAAAGA 155
                                                 * *     *   *   * ** **     ** ***

consensus_10305#0      ATGATTGGTCAAGCTCAGTTTTCATTTGAACAGTTTCTTGCAGCAGCGTTTTCAGTTGTT 357
consensus_10305#3      ATGATTGGTCAAGCTCAGTTTTCATTTGAACAGTTTCTTGCAGCAGCGTTTTCAGTTGTT 320
consensus_10305#1      ATGATTGGTCAAGCTCAGTTTTCATTTGAACAGTTTCTTGCAGCAGCGTTTTCAGTTGTT 597
consensus_10305#2      A-GATTGA-CACACACATTTTTTTT----------------------------------- 516
consensus_10305#4      -CAATTAAATTAACTCACCGTTCGATAGACAAGATT------GCAAT-TCATCAGCACTT 207
                          ***       * **   **                                      

consensus_10305#0      ATATAAGCTTCAAGTTCAAAAGAATCAGACTTACATTTTTCTATAACTACTGACTCTGGA 417
consensus_10305#3      ATATAAGCTTCAAGTTCAAAAGAATCAGACTTACATTTTTCTATAACTACTGACTCTGGA 380
consensus_10305#1      ATATAAGCTTCAAGTTCAAAAGAATCAGACTTCCATTTTTTTATAACTACTGACTCTGGA 657
consensus_10305#2      ------------------------------------------------------------
consensus_10305#4      ATAT----TTCCACTCC--------CATTCTTGT-CAATTCTGAAGGTA----TTTCAAC 250
                                                                                   

consensus_10305#0      TTTTGTGACGTCCCTATCTACTTTTTCAAATAAGTGCTGTTAGCCTGTGTAATGTGTGAT 477
consensus_10305#3      TTTTGTGACGTCCCTATCTACTTTTTCAAATAAGTGCTGNTAGCCTGTGTAATGTGTGAT 440
consensus_10305#1      TTTTGTGACGTCCCTATCTACTTTTTCAAATAAGTGCTGTTACCCTGTGTAATGTGTGAT 717
consensus_10305#2      ------------------------------------------------------------
consensus_10305#4      ATATATCATACCACTGTCTACCTTCT-GAATATACTCCACAAAGCGTTCTGATCCATAAC 309
                                                                                   

consensus_10305#0      TTTGTACCATTTGTGGATATATTAAACTTGCTCTGATTATATGCTTTGTTCATTTTTTAT 537
consensus_10305#3      CTTGTACCATGTGTGGATATATTAAACTTGCTCTGATTATATGCTTTGTTCATTTT---- 496
consensus_10305#1      TTTGTCCCATTTGTGGATATATTAAACTTGCTCTGATTATATGCTTTGTTCATTTTTTAT 777
consensus_10305#2      ------------------------------------------------------------
consensus_10305#4      TC---GCTTCTTGTCACCAGAT--AATCTG------------------------------ 334
                                                                                   

consensus_10305#0      ACTATACCTTCTAATCTAAAGTTGCTTTATTTTGTTGGTATTGGCATTTTCTTTTTGTAT 597
consensus_10305#3      ------------------------------------------------------------
consensus_10305#1      ACTATCCCTTCTAATCTAAAGTTGCTTTATTTTGTTGGTATTGGCATTTTCTTTTTGTAT 837
consensus_10305#2      ------------------------------------------------------------
consensus_10305#4      ------------------------------------------------------------
                                                                                   

consensus_10305#0      TGCAAACCCACTACATAATATACATACATTATTCATAATGTACATTTTTACTGGTTTCTT 657
consensus_10305#3      ------------------------------------------------------------
consensus_10305#1      GGCAAACCCCCTCCAATAATATACATCCTTTTTTC------------------------- 872
consensus_10305#2      ------------------------------------------------------------
consensus_10305#4      ------------------------------------------------------------
                                                                                   

consensus_10305#0      TTTAAAAAAAATTCTGAACAGTATTCTGAAAGAGTACCCCTAAATGAATATTATCTTTTT 717
consensus_10305#3      ------------------------------------------------------------
consensus_10305#1      ------------------------------------------------------------
consensus_10305#2      ------------------------------------------------------------
consensus_10305#4      ------------------------------------------------------------
                                                                                   

consensus_10305#0      GTTATATTCAATTTTGTTCATTTTCTAAGAGTTCGCAGTTAACACGTATGAAATCACTAT 777
consensus_10305#3      ------------------------------------------------------------
consensus_10305#1      ------------------------------------------------------------
consensus_10305#2      ------------------------------------------------------------
consensus_10305#4      ------------------------------------------------------------
                                                                                   

consensus_10305#0      TTTTACAAACTTCAGTTCGATTGACCACTAGGCACTAGTGTTCACTCTAGTTCAACATTC 837
consensus_10305#3      ------------------------------------------------------------
consensus_10305#1      ------------------------------------------------------------
consensus_10305#2      ------------------------------------------------------------
consensus_10305#4      ------------------------------------------------------------
                                                                                   

consensus_10305#0      TATTTTCCCTTTCTACATATAATCCTTAAAATGCTTTTTTTATGTTTTACCAATTGACAG 897
consensus_10305#3      ------------------------------------------------------------
consensus_10305#1      ------------------------------------------------------------
consensus_10305#2      ------------------------------------------------------------
consensus_10305#4      ------------------------------------------------------------
                                                                                   

consensus_10305#0      AAGAGAATAAGATGGAAATAATACACTAT 926
consensus_10305#3      -----------------------------
consensus_10305#1      -----------------------------
consensus_10305#2      -----------------------------
consensus_10305#4      -----------------------------