These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10313#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 15 consensus length = 1349 fasta sequence [GCTCGCNAAGCATACACTTGATTATCTGGTAAACTGCAGCAATGAACCTAATGTATCTATCCCACTACTTGCTGGACTTCTTGTGGAAAGGACACAAGAAAAGTCATGGGTGATTGTTTTCAAAGCTCTTATAACCACTCACAATCTTATGAATTTTGGGAATGAGAAATTTTCTCATTATCTTGCCTCAAATAACTGTCCAATTGATCTCCCACATTTTAATGATAAAACAAGCTCTCAATCTTATGAAATGTCCATATTTATTCGCAAGTATTCAAAATACTTGAGTGAAAAAATTGCCTCTTATAGAGCTATGGCTTTCGACTTTTGTAAAGTGAAGCGAGGGCGTGATGATGGTGTATTACGAACAATGCCAGTTGATAAGTTATTGAAAGCTCTTCCTGTGATGCAATCTCAAATATTAACTCTATTAGAATTTGATGCTCTAGAAAAAGACTTGAACAATGCAATTATTAATGCTGCTTTCCTATTATTGTATAAAGATCTGATTCGCTTATTTGCCTCATATAATGAGGGTATGATTAATTTGATAGAGAAATACTTTACTTTGAAAAGAAGACAATGTCGTCTTGGCTTGGACCTATATCATGCTTTTCCAGGTTTATTATCAAAGCTTACTGA-ATTCCTTACACTTGCTGAGAGTTTGGGAATTGGAGATAAGGATAGTCTAGGCCTACAGCCGGTGCCAGAAAAAGTTATTCAAGCCATGGAGCAACACTTACAAATTTTGGAAAGTAAAAAAGGATCAGATGATGAAGACGAAGAGACGCATACTTCAACCAAACCAAATGTACCAAAGAAGCCAACACTCCCTGTACCTATTCCGAGTCAAACCGTAGTCTGCACTGACGCTAACAAGATATCTAGCCATAATCCACCCACTCAAAACACAGATTACAATGACGATGCGGAATCAATAAACAAAACACATGATTCTAATATTCTGGGTCAATCTGAACAATTGAACGATGATACAACTGAACCGACTGTTGCATCATATCCAACTGTCGTCTTAAATGATGAAGATGGATTACCTTCTGCTTTACAAGAGGAGATAATCGCAACGGCTAAAGGTCATTTAAACGAAACCCTTGTTAAGAGTTCCGAAGCTGTAAAACGTTCAACTCAACAAGGTGCAGTTAAAGCTCCAGTACATACACAATTGGGCAGATCGGAACAACGAACTGTATCAGTGCCACCGACACGTTCACGATCACCATCACCAGCTCGTCCACCCCCATCACCTAGCCGTCAATATGGAAAAACTACACCAAAACAACCATCGATCAGTGCAAGTGATAGTGAAGCAACTAATGATGACAATACGG] [+] EMBL CD069586 [GCTCGCNAAGCATACACTTGATTATCTGGTAAACTGCAGCAATGAACCTAATGTATCTATCCCACTACTTGCTGGACTTCTTGTGGAAAGGACACAAGAAAAGTCATGGGTGATTGTTTTCAAAGCTCTTATAACCACTCACAATCTTATGAATTTTGGGAATGAGAAATTTTCTCATTATCTTGCCTCAAATAACTGTCCAATTGATCTCCCACATTTTAATGATAAAACAAGCTCTCAATCTTATGAAATGTCCATATTTATTCGCAAGTATTCAAAATACTTGAGTGAAAAAATTGCCTCTTATAGAGCTATGGCTTTCGACTTTTGTAAAGTGAAGCGAGGGCGTGATGATGGTGTATTACGAACAATGCCAGTTGATAAGTTATTGAAAGCTCTTCCTGTGATGCAATCTCAAATATTAACTCTATTAGAATTTGATGCTCTAGAAAAAGACTTGAACAATGCAATTATTAATGCTGCTTTCCTATTATTGTATAAAGATCTGATTCGCTTATTTGCCTCATATAATGAGGGTATGATTAATTTGATAGAGAAATACTTTACTTTG AAAGAAGAC ATGTCGTCTTGG TGGACt ] [+] EMBL CD069489 [ ttACTGTGGAAGTAAACCTAATGTATCTATCCCACTACTTGCTGGACTTCTTGTGGAAAGGACACAAGAAAAGTCATGGGTGATTGTTTTCAAAGCTCTTATAACCACTCACAATCTTATGAATTTTGGGAATGAGAAATTTTCTCATTATCTTGCCTCAAATAACTGTCCAATTGATCTCCCACATTTTAATGATAAAACAAGCTCTCAATCTTATGAAATGTCCATATTTATTCGCAAGTATTCAAAATACTTGAGTGAAAAAATTGCCTCTTATAGAGCTATGGCTTTCGACTTTTGTAAAGTGAAGCGAGGGCGTGATGATGGTGTATTACGAACAATGCCAGTTGATAAGTTATTGAAAGCTCTTCCTGTGATGCAATCTCAAATATTAACTCTATTAGAATTTGATGCTCTAGAAAAAGACTTGAACAATGCAATTATTAATGCTGCTTTCCTATTATTGTATAAAGATCTGATTCGCTTATTTGCCTCATATAATGAGGGTATGATTAATTTGATAGAGAA ] [-] EMBL CD123369 [ GAGGGCGTGATGATGGTGTATTACGAACAATGCCAGTTGATAAGTCATTGAAAGCTCTTCCTGTGATGCAATCTCAAATATTAACTCTATTAGAATTTGATGCTCTAGAAAAAGACTTGAACAATGCAATTATTAATGCTGCTTTCCTATTATTGTATAAAGATCTGATTCGCTTATTTGCCTCATATAATGAGGGTATGATTAATTTGATAGAGAAATACTTTACTTTGAAAAGAAGACAATGTCGTCTTGGCTTGGACCTATATCATGCTTTTCCAGGTTTATTATCAGAGCTTACTGA ATTCCTTACACTTGCTGAGAGTTTGGGAATTGGAGATAAGGATAGTCTAGGCCTACAGCCGGTGCCAGAAAAAGTTATTCAAGCCATGGAGCAACACTTACAAATTTTGGAAAGTAAAAAAGG ] [+] EMBL CD183871 [ TTATTGAAAGCTCTTCCTGTGATGCAATCTCAAATATTAACTCTATTAGAATTTGATGCTCTAGAAAAAGACTTGAACAATGCAATTATTAATGCTGCTTTCCTATTATTGTATAAAGATCTGATTCGCTTATTTGCCTCATATAATGAGGGTATGATTAATTTGATAGAGAAATACTTTACTTTGAAAAGAAGAC ] [+] EMBL CD069456 [ TGCTTTCCTATTA TGTATAAAGATCTGATTCGCTTATTTGCCTCATATAATGAGGGTATGATTAATTTGATAGAGAAATACTTTACTTTGAAAAGAAGACAATGTCGTCTTGGCTTGGACCTATATCATGCTTTTCCAGGTTTATTATCAAAGCTTACTGA ATTCCTTACACTTGCTGAGAGTTTGGGAATTGGAGATAAGGATAGTCTAGGCCTACAGCCGGTGCCAGAAAAAGTTATTCAAGCCATGGAGCAACACTCACAAATTTTGGAAAGTAAAAAAGGATCAGATGATGAAGACGAAGAGACGCATACTTCAACCAAACCAAATG ] [+] EMBL CD069495 [ ATAAAGATCTGATTCGCTTATTTGCCTCATATAATGAGGGTATGATTAATTTGATAGAGAAATACTTTACTTTGAAAAGAAGACAATGTCGTCTTGGCTTGGACCTATATCATGCTGCTCCAGCGGGATTATCACAGCTTACTGAGATTCCTTACACTTGCTGAGAGTTTGGGAATTGGAGATAAGGATAGTCTAGGCCTACAGCCGGTGCCAGAAAAAGTTATTCAAGCCATGGAGCAACACTTACAAATTTTGGAAAGTCAACCAGGATCCGATGATGAAGACGAAGAGACGCATACTTCAACCAAACCAAATGTACCANAGAAGCCAACACTCCCTGTACCTATTCCGAGTCAAACCGTAGTCTGCACTGACGCTNAC ] [+] EMBL CD069556 [ TAAAGATCTGATTCGCTTATTTGCCTCATATAATGAGGGTATGATTAATTTGATAGAGAAATACTTTACTTTGAAAAGAAGACAATGTCGTCTTGGCTTGGACCTATATCATGCTTTTCCAGGTTTATTATCAAAGCTTACTGA ATTCCTTACACTTGCTGAGAGTTTGGGAATTGGAGATAAGGATAGTCTAGGCCTACAGCCGGTGCCAGAAAAAGTTATTCAAGCCATGGAGCAACACTTACAAATTTTGGAAAGTCAAACAGGATCAGATGATGAAGACGAAGAGACGCATACTTCAAGCAAANCAAATGTACCATAGAAGCCAACACTCCCTGTACCTATTCCGAGTCAAACCGTAGTCTGCACTGACGCTAAC ] [+] EMBL CD183067 [ AGATAAGGATAGTCTAGGCCTACAGCCGGTGCCAGAAAAAGTTATTCAAGCCATGGAGCAACACTTACAAATTTTGGAAAGTAAAAAAGGATCAGATGATGAAGACGAAGAGACGCATACTTCAACCAAACCAAATGTACCAAAGAAGCCAACACTCCCTGTACCTATTCCGAGTCAAACCGTAGTCTGCACTGACGCTAACAAGATATCTAGCCATAATCCACCCACTCAAAACACAGATTACAATGACGATGCGGAATCAATAAACAAAACACATGATTCTAATATTCTGGGTCAATCTGAACAATTGAACGATGATACAACT ] [+] EMBL CD096420 [ TTATTCAAGCCATGGAGCAACACTTACAAATTTTGGAAAGTAAAAAAGGATCAGATGATGAAGACGAAGAGACGCATACTTCAACCAAACCAAATGTACCAAAGAAGCCAACACTCCCTGTACCTATTCCGAGTCAAACCGTAGTCTGCACTGACGCTAACAAGATATCTAGCCATAATCCACCCACTCAAAACACAGATTACAATGACGATGCGGAATCAATAAACAAAACACATGATTCTAATATTCTGGGTCAATCTGAACAATTGAACGATGATACAACTGAACCGACTGTTGCATCATATCCAACTGTCGTCTTAAATGATGAAGATGGATTACCTTCTGCTTTACAAGAGGAGATAATCGCAACGGCTAAAGGTCATTTAAACGAAACCCTTGTTAAGAGTTCCGAAGCTGTAAAACGTTCAACTCAACAAGGTGCAGTTAAAGCTCCAGTACATACACAATTGGGCAGATCGGAACAACGAACTGTATCAGTGCCACCGACACGTTCACGATCACCATCACCAGCTCGTCCACCCCCATCACCTAGCCGTCAATA ] [-] EMBL CD097151 [ TACCTAGCCATAATCCACCCACTCAAAACACAGATTACAATGACGATGCGGAATCAATAAACAAAACACATGATTCTAATATTCTGGGTCAATCTGAACAATTGAACGATGATACAACTGAACCGACTGTTGCATCATATCCAACTGTCGTCTTAAATGATGAAGATGGATTACCTTCTGCTTTACAAGAGGAGATAATCGCAACGGCTAAAGGTCATTTAAACGAAACCCTTGTTAAGAGTTCCGAAGCTGTAAAACGTTCAACTCAACAAGGTGCAGTTAAAGCTCCAGTACATACACAATTGGGTAGATCGGAACAACGAACTGTATCAGTGCCACCGACACGTTCACGATCACCATCACCAGCTCGTCCACCCCCATCACCTAGCCGTCAATATGGAAAAACTACACCAAAA ] [-] EMBL CD097150 [ TATCTAGCCATAATCCACCCACTCAAAACACAGATTACAATGACGATGCGGAATCAATAAATAAAACACATGATTCTAATATTCTGGGTCAATCTGAACAATTGAACGATGATTCAACTGAACCGACTGTTGCATCATATCCAACTGTCGTCTTAAATGATGAAGATGGATTACCTTCTGCTTTACAAGAGGAGATAATCGCAACGGCTAAAGGTCATTTAAACGAAACCCTTGTTAAGAGTTCCGAAGCTGTAAAACGTTCAACTCAACAAGGTGCAGTTAAAGCTCCAGTACATACACAATTGGGCAGATCGGAACAACGAACTGTATCAGTGCCACCGACACGTTCACGATCACCATCACCAGCTCGTCCACCCCCATCACCTAGCCGTCAATATGGAAAAACTACACCAAAA ] [-] EMBL CD097127 [ TATCTAGCCATAATCCACCCACTCAAAACACAGATTACAATGACGATGCGGAATCAATAAACAAAACACATGATTCTAATATTCTGGGTCAATCTGAACAATTGAACGATGATACAACCGAACCGACTGTTGCATCATATCCAACTGTCGTCTTAAATGATGAAGATGGATTACCTTCTGCTTTACAAGAGGAGATAATCGCAACGGCTAAAGGTCATTTAAACGAAACCCTTGTTAAGAGTTCCGAAGCTGTAAAACGTTCAACTCAACAAGGTGCAGTTAAAGCTCCAGTACATACACAATTGGGCAGATCGGAACAACGAACTGTATCAGTGCCACCGACACGTTCACGATCACCATCACCAGCTCGTCCACCCCCATCACCTAGCCGTCAATATGGAAAAACTACACCAAAA ] [-] EMBL CD097124 [ CCATAATCCACCCACTCAAAACACAGATTACAATGACGATGCGGAATCAATAAACAAAACACATGATTCTAATATTCTGGGTCAATCTGAACAATTGAACGATGATACAACTGAACCGACTGTTGCATCATATCCAACTGTCGTCTTAAATGATGAAGATGGATTACCTTCTGCTTTACAAGAGGAGATAATCGCAACGGCTAAAGGTCATTTAAACGAAACCCTTGTTAAGAGTTCCGAAGCTGTAAAACGTTCAACTCAACAAGGTGCAGTTAAAGCTCCAGTACATACACAATTGGGTAGATCGGAACAACGAACTGTATCAGTGCCACCGACACGTTCACGATCACCATCACCAGCTCGTCCACCCCCATCACCTAGCCGTCAATATGGAAAAACTACACCAAAA ] [+] EMBL CD062011 [ CAGATTACAATGACGATGCGGAATCAATAAACAAAACACATGATTCTAATATTCTGGGTCAATCTGAACAATTGAACGATGATACAACTGAACCGACTGTTGCATCATATCCAACCGTCGTCTTAAATGATGAAGATGGATTACCTTCTGCTTTACAAGAGGAGATAATCGCAACGGCTAAAGGTCATTTAAACGAAACCCTTGTTAAGAGTTCCGAAGCTGTAAAACGTTCAACTCAACAAGGTGCAGTTAAAGCTCCAGTACATACACAATTGGGCAGATCGGAACAACGAACTGTATCAGTGCCACCGACACGTTCACGATCACCATCACCAGCTCGTCCACCCCCATCACCTAGCCGTCAATATGGAAAAACTACACCAAAACAACCATCGATCAGTGCAAGTGATAGTGAAGCAACTAATGATGACAATACGG] [-] EMBL CD134142 [ GATTACAATGACGATGCGGAATCAATAAACAAAACACATGATTCTAATATTCTGGGTCAATCTGAACAATTGAACGATGATATAACTGAACCGACTGTTGCATCATATCCAACTGTCGTCTTAAATGATGAAGATGGATTACCTTCTGCTTTACAAGAGGAGATAATCGCAACGGCTAAAGGTCATTTAAACGAAACCCTTGTTAAGAGTTCCGAAGCTGTAAAACGTTCAACTCAACAAGGTGCAGTTAAAGCTCCAGTACATACACAATTGGGCAGATCGGAACAACGAACTGTATCAGTGCCACCGACACGTTCACcaccca ] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||