Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 10429 cluster # 10429       Sequences # 16       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10429#0 length = 1050 sequences # 8  
consensus_10429#1 length = 676 sequences # 8  

consensusID : consensus_10429#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1050
fasta sequence
                              [GAGCCAT--ATTCGGCACGAGG-AAAAATA-CAGGCTGATACAAACACATTTTTTGGCCGATTTTCGCAGATTGTTGAAGAGGCATTTGGTACTACTGAACGAACATCATACAGTCCTGATCTAACGGAGTTAATGAAAGAAGGCGAAAAACGGAGAAACTGGGCGGTGAGCATTTTGGCACAACTTGAAAATGTGATTCAACCGAATCCAGCCCTACGAATTGAAGATCTTATACTTAGAGGAATGAACAGGGAGAAAGTTCGCCTGAGTGCTAATGAACAATTGGGTGAAAGTATGGATCGTATTAGTAGCCTAATTAGTAAAAACTCTAACTATGGCTCACCAGGTGAGGCACTTAAGAAATGTGCAATGGCCCAAATAGAAATTGGACAATCTGAAAGAAAATTGCAAGAAACCGTCTCTTCAGAATACATCACATGGTTACGCAGTTACATAGCATCTGAAGCCAAATTAGCAAAACAAGAAC-GAGACAAATTGGAAAATGCTCGATTAGATTTAGATCGTATTAAAACATCAAAAAAACGTGCGAAAAATGGCAAACAACATGTATTTGAGCAATCGTTGAAAGATGCCGAATCAGCATTCAATTTTCAGTGTGAAACCACTAAGCGTTGTTTACAAGAAAGTATAGACAAATTTGACTCACAAAAAGAAGAGCTAAGAAAACTTTTAAAAGCTCAATCGGAACACTTTAAAGCATGTTCAGATGCGGTAGAATCGGCATTACGTGCGATCTAAAAAAATCCGGGAACTCAGACTAATTCAAAAAGAAGAGTGAAAACGCTGAGGATCCTCTA-T-TCATAATAATAAT-AATAATAATAATAGTAAAACGAATGAATTTCTGATAATATTCTTCAACATTTACATCATTTTATCATTTCGTATTTACAAGCTACTTACATTTCTACTTAAATATCTGTGATACATTTAGAAA-TTTTTTTTTTGAATGTTACTTTTTCATACATTTTTTTCCTTAACAATTAC-TTTTGTTGTTTCATACGTTAAAAAGAAAAAAAAGGAAGATAAATGTTG]

[+] EMBL CD081562             [GAGCCAT  ATTCGGCACGAGG AAAAATA CAGGCTGATACAAACACATTTTTTGGCCGATTTTCGCAGATTGTTGAAGAGGCATTTGGTACTACTGAACGAACATCATACAGTCCTGATCTAACGGAGTTAATGAAAGAAGGCGAAAAACGGAGAAACTGGGCGGTGAGCATTTTGGCACAACTTGAAAATGTGATTCAACCGAATCCAGCCCTACGAATTGAAGATCTTATACTTAGAGGAATGAACAGGGAGAAAGTTCGCCTGAGTGCTAATGAACAATTGGGTGAAAGTATGGATCGTATTAGTAGCCTAATTAGTAAAAACTCTAACTATGGCTCACCAGGTGAGGCACTTAAGAAATGTGCAATGGCCCAAATAGAAATTGGACAATCTGAAAGAAAATTGCAAGAAACCGTCTCTTCAGAATACATCACATGGTTACGCAGTTACATAGCATCTGAAGCCAAATTAGCAAAACAAGAAC GAGACAAATTGGAAAATGCTCGATTAGATTTAGATCGTATTAAAACATCAAAAAAACGTGCGAAAAATGGCAAACAACATGTATTTGAGCAATCGTTGAAAGATGCCGAATCAGCATTCAATTTTCAGTGTGAAACCACTAAGCGTTGTTTACAAGAAAGTATAGACAAATTTGACTCACAAAAAGAAGAGCTAAGAAAACTTTTAAAAGCTCAATCGGAACACTTTAAAGCATGTTCAGATGCGGTAGAATCGGCATTACGTGCGATCTAAAAAAATCCGGGAACTCAGACTAATTCCAAAAGAAGAGTGAAAACGCTGAGGATCCTCTA TNNTAT AT ATAAT AATAATAATAATAGTAAAACGAATGAATTTCTGATAATATTCTTCAACATTTACATCATTTTATCATTTCGTATTTACAAGCTACTTACATTTCTACTTAAATATCTGNGATACATTTAGAAA TTTTTTTTTTGAAT TTACCTTTTCATACATTTTTTTCCTT ACAATNAC TTTTGTTGTTTCATACGTTAAAAAGAAAAAAAAGGAAGATAAATGTTG]
[+] EMBL CD081772             [ AGCCTTTAATTCGGCACCAGGAAAAAATA CAGGCTGAT CAAACACATTTTTTGGCCGATTTTCGCAGATTGTTGAAGAGGCATTTGGTACTACTGAACGAACATCATACAGTCCTGATCTAACGGAGTTAATGAAAGAAGGCGAAAAACGGAGAAACTGGGCGGTGAGCATTTTGGCACAACTTGAAAATGTGATTCAACCGAATCCAGCCCTACGAATTGAAGATCTTATACTTAGAGGAATGAACAGGGAGAAAGTTCGCCTGAGTGCTAATGAACAATTGGGTGAAAGTATGGATCGTATTAGTAGCCTAATTAGTAAAAACTCTAACTATGGCTCACCAGGTGAGGCACTTAAGAAATGTGCAATGGCCCAAATAGAAATTGGACAATCTGAAAGAAAATTGCAAGAAACCGTCTCTTCAGAATACATCACATGGTTACGCAGTTACATAGCATCTGAAGCCAAATTAGCAAAACAAGAAC GAGACAAATTGGAAAATGCTCGATTAGATTTAGATCGTATTAAAACATCAAAAAAACGTGCGAAAAATGGCAAACAACATGTATTTGAGCAATCGTTGAAAGATGCCGAATCAGCATTCAATTTTCAGTGTGAAACCACTAAGCGTTGTTTACAAGAAAGTATAGACAAATTTGACTCACAAAAAGAAGAGCTAAGAAAACTTTTAAAAGCTCAATCGGAACACTTTAAAGCATGTTCAGATGCGGTAGAATCGGCATTACGTGCGATCTANAAAAATCCGGGAACTCAGACTAATTCAAAAAGAAGAGTGAAAACGCTGAGGATCCTCTANN TTAT ATANTANTNNATAATAAT ATAGTAAAACGAATGAATTTCTGATAATATTCTTCAACATTTACATCATTTTATCATTTCGTATTTACAAGCTACTTACATTTCTACTTAAATATCTGTGATACATTTAGAAA TTNTTTTTTTGAATGGTAC TTTTCATACATTTTTTTCC TAACAANTAC TTTTG TG TTCATACGTT AAAAGAAAAAAAAGG AGAT AATGT  ]
[+] EMBL CD078080             [            CGGCACGAGG AAAAATACCAGGCTGATACAAACACATTTTTTGGCCGATTTTCGCAGATTGTTGAAGAGGCATTTGGTACTACTGAACGAACATCATACAGTCCTGATCTAACGGAGTTAATGAAAGAAGGCGAAAAACGGAGAAACTGGGCGGTGAGCATTTTGGCACAACTTGAAAATGTGATTCAACCGAATCCAGCCCTACGAATTGAAGATCTTATACTTAGAGGAATGAATAGGGAGAAAGTTCGCCTGAGTGCTAATGAACAATTGGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CD075503             [                                                                                                                                                                                                                                                                                                                                                                                                                     ATTGCAAGAACCCGTCTCTTCAGAATACATCACATGGTTACGCAGTTACATAGCATCTGAAGCCAAATTAGCAAACCAAGACC GAGCCAAATTGGAAAATGCTCGATTAGATTTAGATCGTATTAAAACATCAAAAAAACGTGCGAAAAATGGCAAACAACATGTATTTGAGCAATCGTTGAAAGATGCCGAATCAGCATTCAATTTTCAGTGTGAAACCACTAAGCGTTGTTTACAAGAAAGTATAGCCAAATTTGACTCCCAAAAAGAAGAGCTAAGAAAACTTTTAAAAGCTCAATCGGAACACTTTAAAGCATGTTCAGATGCGGTAGAATCGGCATTACGTGCGATTTAAAAAAATCCGGGAACTCAGATTAATTCAAAAAGAAGAGTGAAAACGCTGAGGATCCTCTA T TAATAATAATAAT AATAATAATAATAGTAAAACGAATGAATTTCTGATAATATTCTTCAACATTTACATCATTTTATCATTTGGTATTTACAAGCTACTTACATTTCTACTTAAATATCTGTGATACATTTAGAAA TTTTTTTTTTGAATGTTACTTTTTCATACATTTTTTTCCTTAACAATTAC TTTTGTTGTTT                                     ]
[-] EMBL CD074244             [                                                                                                                                                                                                                                                                                                                                                                                                                                         CAGAATACATCACATGGTTACGCAGTTACATAGCATCTGAAGCCAAATTAGCAAAACAAGAAC GAGACAAATTGGAAAATGCTCGATTAGATTTAGATCGTATTAAAACATCAAAAAAACGTGCGAAAAATGGCAAACAACATGTATTTGAGCAATCGTTGAAAGATGCCGAATCAGCATTCAATTTTCAGTGTGAAACCACTAAGCGTTGTTTACAAGAAAGTATAGACAAATTTGACTCACAAAAAGAAGAGCTAAGAAAACTTTTAAAAGCTCAATCGGAACACTTTAAAGCATGTTCAGATGCGGTAGAATCGGCATTACGTGCGATCTAAAAAAATCCGGGAACTCAGACTAATTCAAAAAGAAGAGTGAAAACGCTGAGGATCCTCTA T TCATAATAATAAT AATAATAATAATAGTAAAACGAATGAATTTCTGATAATATTCTTCAACATTTACATCATTTTATCATTTCGTATTTACAAGCTACTTACATTTCTACTTAAATATCTGTGATACATTTAGAAA TTTTTTTTTTGAATGTTACTTTTTCATACATTTTTTTCCTTAACAATTAC TTTTGTTGTTT                                     ]
[-] EMBL CD074081             [                                                                                                                                                                                                                                                                                                                                                                                                                                            AATACATCACATGGTTACGCAGTTACATAGCATCTGAAGCCAAATTAGCAAAACAAGAAC GAGACAAATTGGAAAATGCTCGATTAGATTTAGATCGTATTAAAACATCAAAAAAACGTGCGAAAAATGGCAAACAACATGTATTTGAGCAATCGTTGAAAGATGCCGAATCAGCATTCAATTTTCAGTGTGAAACCACTAAGCGTTGTTTACAAGAAAGTATAGACAAATTTGACTCACAAAAAGAAGAGCTAAGAAAACTTTTAAAAGCTCAATCGGAACACTTTAAAGCATGTTCAGATGCGGTAGAATCGGCATTACGTGCGATTTAAAAAAATCCGGGAACTCAGACTAATTCAAAAAGAAGAGTGAAAACGCTGAGGATCCTCTA T TCATAATAATAAT AATAATAATAATAGTAAAACGAATGAATTTCTGATAATATTCTTCAACATTTACATCATTTTATCATTTCGTATTTACAAGCTACTTACATTTCTACTTAAATATCTGTGATACATTTAGAAA TTTTTTTTTTGAATGTTACTTTTTCATACATTTTTTTCCTTAACAATTAC TTTTGTTGTTT                                     ]
[+] EMBL CD082412             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ACATAGCATCTGAAGCC ATTCATCTAAACAAGAACACCCACAAATTGGAAAATGCTCGATTAGATTTAGATCGTATTAAAACATCAAAAAAACGTGCGAAAAATGGCAAACAACATGTATTTGAGCAATCGTTGAAAGATGCCGAATCAGCATTCAATTTTCAGTGTGAAACCACTATTTGTTGTTTACAAGAAAGTATAGACAAATTTGACTCACAAAAAGAAGAGCTAAGAAAACTTTTAAAAGCTCAATCGGAACACTTTAAAGCATGTTCAGATGCGGTAGAATCGGCATTACGTGCGATCTAAAAAAATCCGGGAACTCAGACTAATTCAAAAAGAAGAGTGAAAACGCTGAGGATCCTCTA T TCATAATAATAAT AATAATAATAATAGTAAAACGAATGAATTTCTGATAATATTCTTCAACATTTACATCATTTTATCATTTCGTATTTACAAGCTACTTACATTTCTACTTAAATATCTGTGATACATTTAGAAATTTTTTTTTTTGAATGTTACTTTTTCATACATTTTTTTCCTTAACAATTACTTTTTGTGGT                                       ]
[-] EMBL CD075390             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      AATTAGCAAAACAAGAAC GAGACAAATTGGAAAATGCTCGATTAGATTTAGATCGTATTAAAACATCAAAAAAACGTGCGAAAAATGGCAAACAACATGTATTTGAGCAATCGTTGAAAGATGCCGAATCAGCATTCAATTTTCAGTGTGAAACCACTAAGCGTTGTTTCCAAGAAAGTATAGACAAATTTGACTCACAAAAAGAAGAGCTAAGAAAACTTTTAAAAGCTCAATCGGAACACTTTAAAGCATGTTCAGATGCGGTAGAATCGGCATTACGTGCGATTTAAAAAAATCCGGGAACTCAGATTAATTCAAAAAGAAGAGTGAAAACGCTGAGGATCCTCTA T TAATAATAATAAT AATAATAATAATAGTAAAACGAATGAATTTCTGATAATATTCTTCAACATTTACATCATTTTATCATTTGGTATTTACAAGCTACTTACATTTCTACTTAAATATCTGTGATACATTTAGAAA TTTTTTTTTTGAATGTTACTTTTTCATACATTTTTTTCCTTAACAATTAC TTTTGTTGTTT                                     ]


>consensus_10429#0 GAGCCATATTCGGCACGAGGAAAAATACAGGCTGATACAAACACATTTTTTGGCCGATTT TCGCAGATTGTTGAAGAGGCATTTGGTACTACTGAACGAACATCATACAGTCCTGATCTA ACGGAGTTAATGAAAGAAGGCGAAAAACGGAGAAACTGGGCGGTGAGCATTTTGGCACAA CTTGAAAATGTGATTCAACCGAATCCAGCCCTACGAATTGAAGATCTTATACTTAGAGGA ATGAACAGGGAGAAAGTTCGCCTGAGTGCTAATGAACAATTGGGTGAAAGTATGGATCGT ATTAGTAGCCTAATTAGTAAAAACTCTAACTATGGCTCACCAGGTGAGGCACTTAAGAAA TGTGCAATGGCCCAAATAGAAATTGGACAATCTGAAAGAAAATTGCAAGAAACCGTCTCT TCAGAATACATCACATGGTTACGCAGTTACATAGCATCTGAAGCCAAATTAGCAAAACAA GAACGAGACAAATTGGAAAATGCTCGATTAGATTTAGATCGTATTAAAACATCAAAAAAA CGTGCGAAAAATGGCAAACAACATGTATTTGAGCAATCGTTGAAAGATGCCGAATCAGCA TTCAATTTTCAGTGTGAAACCACTAAGCGTTGTTTACAAGAAAGTATAGACAAATTTGAC TCACAAAAAGAAGAGCTAAGAAAACTTTTAAAAGCTCAATCGGAACACTTTAAAGCATGT TCAGATGCGGTAGAATCGGCATTACGTGCGATCTAAAAAAATCCGGGAACTCAGACTAAT TCAAAAAGAAGAGTGAAAACGCTGAGGATCCTCTATTCATAATAATAATAATAATAATAA TAGTAAAACGAATGAATTTCTGATAATATTCTTCAACATTTACATCATTTTATCATTTCG TATTTACAAGCTACTTACATTTCTACTTAAATATCTGTGATACATTTAGAAATTTTTTTT TTGAATGTTACTTTTTCATACATTTTTTTCCTTAACAATTACTTTTGTTGTTTCATACGT TAAAAAGAAAAAAAAGGAAGATAAATGTTG



consensusID : consensus_10429#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 676
fasta sequence
                              [GAGCCAAAAATTCGGCTGGTCATGGATGCTAAAAAAAT-ACAGGCTGATACAAACACATTTTTTGGCCGATTTTCGCAGATTGTTGAAGAGGCATTTGGTACTACTGAACGAACATC-ATACAGTCCTGATCTAACGGAGTTAATGAAAGAAGGCGAAAAACGGAGAAACTGGGCGGTGAGCATTTTGGCACAACTTGAAAATGTGATTCAACCGAATCCAGCCCTACGAATTGAAGATCTTATACTTAGAGGAATGAATAGGGAGAAAGTTCGCCTGAGTGCTAATGAACAATTGGGTGAAAGTATGGATCGTATTAGTAGCCTAATTAGTAAAAACTCTAACTATGGCTCACCAGGTGAGGCACTTAAGAAATGTGCAATGGCCCAAATAGAAATTGGACAATCTGAAAGAAAATTGCAAGAAACCGTCTCTTCAGAATACATCACATGGTTACGCAGTTACATAGCATCTGAAGCCAAATTAGCAAAACAAGAACGAGACAAATTGGAAAATGCTCGATTAGATTTAGATCGTATTAAAACATCAAAAAAACGTGCGAAAAATGGCAAACAACATGTATTTGAGCAATCGTTGAAAGATGCCGAATCAGCATTCAATTTTCAGTGTGAAACCACTAAGCGTTGTTTACAAGAAAGTATAGACAAATTTGACTCAC]

[+] EMBL CD079823             [GAGCCAAAAATTCGGCACGAGGTGGATGCTAAAAAAATNACAGGCTGATACAAACACATTTTTTGGCCGATTTTCGCAGATTGTTGAAGAGGCATTTGGTACTACTGAACGAACATC ATACAGTCCTGATCTAACGGAGTTAATGAAAGAAGGCGAAAAACGGAGAAACTGGGCGGTGAGCATTTTGGCACAACTTGAAAATGTGATTCAACCGAATCCAGCCCTACGAATTGAAGATCTTATACTTAGAGGAATGAATAGGGAGAAAGTTCGCCTGAGTGCTAATGAACAATTGGGTGAAAGTATGGATCGTATTAGTAGCCTAATTAGTAAAAACTCTAACTATGGCTCACCAGGTGAGGCACTTAAGAAATGTGCAATGGCCCAAATAGAAATTGGACAATCTGAAAGAAAATTGCAAGAAACCGTCTCTTCAGAATACATCACATGGTTACGCAGTTACATAGCATCTGAAGCCAAATTAGCAAAACAAGAACGAGACAAATTGGAAAATGCTCGATTAGATTTAGATCGTATTAAAACATCAAAAAAACGTGCGAAAAATGGCAAACAACATGTATTTGAGCAATCGTTGAAAGATGCCGAATCAGCATTCAATTTTCAGTGTGAAACCACTAAGCGTTGTTTACAAGAAAGTATAGACAAATTTGACTCAC]
[+] EMBL CD083723             [                TGGTCATGGATGCTAAAAAAAT ACAGGCTGATACAAACACATTTTTTGGCCGATTTTCGCAGATTGTTGAAGAGGCATTTGGTACTACTGAACGAACATC ATACAGTCCTGATCTAACGGAGTTAATGAAAGAAGGCGAAAAACGGAGAAACTGGGCGGTGAGCATTTTGGCACAACTTGAAAATGTGATTCAACCGAATCCAGCCCTACGAATTGAAGATCTTATACTTAGAGGAATGAATAGGGAGAAAGTTCGCCTGAGTGCTAATGAACAATTGGGTGAAAGTATGGATCGTATTAGTAGCCTAATTAGTAAAAACTCTAACTATGGCTCACCAGGTGAGGCACTTAAGAAATGTGCAATGGCCCAAATAGAAATTGGACAATCTGAAAGAAAATTGCAAGAAACCGTCTCTTCAGAATACATCACATGGTTACGCAGTTACATAGCATCTGAAGCCAAATTAGCAAAACAAGAACGAGACAAATTGGAAAATGCTCGATTAGATTTAGATCGTATTAAAACAT                                                                                                                                    ]
[+] EMBL CD077545             [              agTGGTCATGGATGCTAAAAAAAT ACAGGCTGATACAAACACATTTTTTGGCCGATTTTCGCAGATTGTTGAAGAGGCATTTGGTACTACTGAACGAACATC ATACAGTCCTGATCTAACGGAGTTAATGAAAGAAGGCGAAAAACGGAGAAACTGGGCGGTGAGCATTTTGGCACAACTTGAAAATGTGATTCAACCGAATCCAGCCCTACGAATTGAAGATCTTATACTTAGAGGAATGAATAGGGAGAAAGTTCGCCTGAGTGCTAATGA                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CD185615             [                                                                           GCAGATTGTTGAAGAGGCATTTGGTACTACTGAACGAACATC ATACAGTCCTGATCTAACGGAGTTAATGAAAGAAGGCGAAAAACGGAGAAACTGGGCGGTGAGCATTTTGGCACAACTTGAAAATGTGATTCAACCGAATCCAGCCCTACGAATTGAAGATCTTATACTTAGAGGAATGAATAGGGAGAAAGTTCGCCTGAGTGCTAATGAACAATTGGGTGAAAGTATGGATCGTATTAGTAGCCTAATTAGTAAAAACTCTAACTATGGCTCACCAGGTGAGGCACTTAAGAAATGTGCAATGGCCCAAATAGAAATTGGACAATCTAAAAGAAAATTGCAAGAAACCGTCTCTTCAGAATACATCACATGGTTACGCAGTTACATAGCATCTGAAGC                                                                                                                                                                                                        ]
[-] EMBL CD187115             [                                                                                           GCATTTGGTACTACTGAACGAACATC ATACAGTCCTGATCTAACGGAGTTAATGAAAGAAGGCGAAAAACGGAGAAACTGGGCGGTGAGCATTTTGGCACAACTTGAAAATGTGATTCAACCGAATCCAGCCCTACGAATTGAAGATCTTATACTTAGAGGAATGAATAGGGAGAAAGTTCGCCTGAGTGCTAATGAACAATTGGGTGAAAGTATGGATCGTATTAGTAGCCTAATTAGTAAAAACTCTAACTATGGCTCACCAGGTGAGGCACTTAAGAAATGTGCAATGGCCCAAATAGAAATTGGACAATCTGAAAGAAAATTGCAAGAAACCGTCTCTTCAGAATACATCACATGGTTACGCAGTTACATAGCATCTGAAGCCAAATTAGCAAAAAAAG                                                                                                                                                                                       ]
[+] EMBL CD063571             [                                                                                                     CTACTGAACGAACATC ATACAGTCCTGATCTAACGGAGTTAATGAAAGAAGGCGAAAAACGGAGAAACTGGGCGGTGAGCATTTTGGCACAACTTGAAAATGTGATTCAACCGAATCCAGCCCTACGAATTGAAGATCTTATACTTAGAGGAATGAATAGGGAGGAAGTTCGCCTGAGTGCTAATGAACAATTGGGTGAAAGTATGGATCGTATTAGTAGCCTAATTAGTAAAAACTCTAACTATGGCTCACCAGGTGAGGCACTTAAGAAATGTGCAATGGCCCAAATAGAAATTGGACAATCTGAAAGACAATTGCAAGAAACCGTCTCTTCAGAATACATCACATGGTTACGCAGTTACATAGCATCTGAAGCCAAATTAGCAAAACAAGAACGAGACAAATTGGAAAATGCTCGATTAGATTTAGATCGTATTAAAACATCAAAAAAACGTGCGAAAAATGGCAAACAACATGTATTTGAGCAA                                                                                        ]
[+] EMBL CD063577             [                                                                                                       ACTGAACGAACATCAATACAGTCCTGATCTAACGGAGTTAATGAAAGAAGGCGAAAAACGGAGAAACTGGGCGGTGAGCATTTTGGCACAACTTGAAAATGTGATTCAACCGAATCCAGCCCTACGAATTGAAGATCTTATACTTAGAGGAATGAATAGGGAGGAAGTTCGCCTGAGTGCTAATGAACAATTGGGTGAAAGTATGGATCGTATTAGTAGCCTAATTAGTAAAAACTCTAACTATGGCTCACCAGGTGAGGCACTTAAGAAATGTGCAATGGCCCAAATAGAAATTGGACAATCTGAAAGAAAATTGCAAGAAACCGTCTCTTCAGAATACATCACATGGTTACGCAGTTACATAGCATCTGAAGCCAAATTAGCAAAACAAGAACGAGACAAATTGGAAAATGCTCGATTAGATTTAGATCGTATTAAAACATCAAAAAAACGTGCGAAAAATGGCAAACAACATGTATTTGAGCAA                                                                                        ]
[-] EMBL CD132306             [                                                                                                                                                   AAGAAGGCGAAAAACGGAGAAACTGGGCGGTGAGCATTTTGGCACAACTTGAAAATGTGATTCAACCGAATCCAGCCCTACGAATTGAAGATCTTATACTTAGAGGAATGAATAGGGAGAAAGTTCGCCTGAGTGCTAATGAACAATTGGGTGAAAGTATGGATCGTATTAGTAGCCTAATTAGTAAAAACTCTAACTATGGCTCACCAGGTGAGGCACTTA                                                                                                                                                                                                                                                                                                                     ]


>consensus_10429#1 GAGCCAAAAATTCGGCTGGTCATGGATGCTAAAAAAATACAGGCTGATACAAACACATTT TTTGGCCGATTTTCGCAGATTGTTGAAGAGGCATTTGGTACTACTGAACGAACATCATAC AGTCCTGATCTAACGGAGTTAATGAAAGAAGGCGAAAAACGGAGAAACTGGGCGGTGAGC ATTTTGGCACAACTTGAAAATGTGATTCAACCGAATCCAGCCCTACGAATTGAAGATCTT ATACTTAGAGGAATGAATAGGGAGAAAGTTCGCCTGAGTGCTAATGAACAATTGGGTGAA AGTATGGATCGTATTAGTAGCCTAATTAGTAAAAACTCTAACTATGGCTCACCAGGTGAG GCACTTAAGAAATGTGCAATGGCCCAAATAGAAATTGGACAATCTGAAAGAAAATTGCAA GAAACCGTCTCTTCAGAATACATCACATGGTTACGCAGTTACATAGCATCTGAAGCCAAA TTAGCAAAACAAGAACGAGACAAATTGGAAAATGCTCGATTAGATTTAGATCGTATTAAA ACATCAAAAAAACGTGCGAAAAATGGCAAACAACATGTATTTGAGCAATCGTTGAAAGAT GCCGAATCAGCATTCAATTTTCAGTGTGAAACCACTAAGCGTTGTTTACAAGAAAGTATA GACAAATTTGACTCAC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10429#0      GAGCCATA--TTCGGC-----ACGAG-----GAAAAATACAGGCTGATACAAACACATTT 48
consensus_10429#1      GAGCCAAAAATTCGGCTGGTCATGGATGCTAAAAAAATACAGGCTGATACAAACACATTT 60
                       ****** *  ******     * *        ****************************

consensus_10429#0      TTTGGCCGATTTTCGCAGATTGTTGAAGAGGCATTTGGTACTACTGAACGAACATCATAC 108
consensus_10429#1      TTTGGCCGATTTTCGCAGATTGTTGAAGAGGCATTTGGTACTACTGAACGAACATCATAC 120
                       ************************************************************

consensus_10429#0      AGTCCTGATCTAACGGAGTTAATGAAAGAAGGCGAAAAACGGAGAAACTGGGCGGTGAGC 168
consensus_10429#1      AGTCCTGATCTAACGGAGTTAATGAAAGAAGGCGAAAAACGGAGAAACTGGGCGGTGAGC 180
                       ************************************************************

consensus_10429#0      ATTTTGGCACAACTTGAAAATGTGATTCAACCGAATCCAGCCCTACGAATTGAAGATCTT 228
consensus_10429#1      ATTTTGGCACAACTTGAAAATGTGATTCAACCGAATCCAGCCCTACGAATTGAAGATCTT 240
                       ************************************************************

consensus_10429#0      ATACTTAGAGGAATGAACAGGGAGAAAGTTCGCCTGAGTGCTAATGAACAATTGGGTGAA 288
consensus_10429#1      ATACTTAGAGGAATGAATAGGGAGAAAGTTCGCCTGAGTGCTAATGAACAATTGGGTGAA 300
                       ***************** ******************************************

consensus_10429#0      AGTATGGATCGTATTAGTAGCCTAATTAGTAAAAACTCTAACTATGGCTCACCAGGTGAG 348
consensus_10429#1      AGTATGGATCGTATTAGTAGCCTAATTAGTAAAAACTCTAACTATGGCTCACCAGGTGAG 360
                       ************************************************************

consensus_10429#0      GCACTTAAGAAATGTGCAATGGCCCAAATAGAAATTGGACAATCTGAAAGAAAATTGCAA 408
consensus_10429#1      GCACTTAAGAAATGTGCAATGGCCCAAATAGAAATTGGACAATCTGAAAGAAAATTGCAA 420
                       ************************************************************

consensus_10429#0      GAAACCGTCTCTTCAGAATACATCACATGGTTACGCAGTTACATAGCATCTGAAGCCAAA 468
consensus_10429#1      GAAACCGTCTCTTCAGAATACATCACATGGTTACGCAGTTACATAGCATCTGAAGCCAAA 480
                       ************************************************************

consensus_10429#0      TTAGCAAAACAAGAACGAGACAAATTGGAAAATGCTCGATTAGATTTAGATCGTATTAAA 528
consensus_10429#1      TTAGCAAAACAAGAACGAGACAAATTGGAAAATGCTCGATTAGATTTAGATCGTATTAAA 540
                       ************************************************************

consensus_10429#0      ACATCAAAAAAACGTGCGAAAAATGGCAAACAACATGTATTTGAGCAATCGTTGAAAGAT 588
consensus_10429#1      ACATCAAAAAAACGTGCGAAAAATGGCAAACAACATGTATTTGAGCAATCGTTGAAAGAT 600
                       ************************************************************

consensus_10429#0      GCCGAATCAGCATTCAATTTTCAGTGTGAAACCACTAAGCGTTGTTTACAAGAAAGTATA 648
consensus_10429#1      GCCGAATCAGCATTCAATTTTCAGTGTGAAACCACTAAGCGTTGTTTACAAGAAAGTATA 660
                       ************************************************************

consensus_10429#0      GACAAATTTGACTCACAAAAAGAAGAGCTAAGAAAACTTTTAAAAGCTCAATCGGAACAC 708
consensus_10429#1      GACAAATTTGACTCAC-------------------------------------------- 676
                       ****************                                            

consensus_10429#0      TTTAAAGCATGTTCAGATGCGGTAGAATCGGCATTACGTGCGATCTAAAAAAATCCGGGA 768
consensus_10429#1      ------------------------------------------------------------
                                                                                   

consensus_10429#0      ACTCAGACTAATTCAAAAAGAAGAGTGAAAACGCTGAGGATCCTCTATTCATAATAATAA 828
consensus_10429#1      ------------------------------------------------------------
                                                                                   

consensus_10429#0      TAATAATAATAATAGTAAAACGAATGAATTTCTGATAATATTCTTCAACATTTACATCAT 888
consensus_10429#1      ------------------------------------------------------------
                                                                                   

consensus_10429#0      TTTATCATTTCGTATTTACAAGCTACTTACATTTCTACTTAAATATCTGTGATACATTTA 948
consensus_10429#1      ------------------------------------------------------------
                                                                                   

consensus_10429#0      GAAATTTTTTTTTTGAATGTTACTTTTTCATACATTTTTTTCCTTAACAATTACTTTTGT 1008
consensus_10429#1      ------------------------------------------------------------
                                                                                   

consensus_10429#0      TGTTTCATACGTTAAAAAGAAAAAAAAGGAAGATAAATGTTG 1050
consensus_10429#1      ------------------------------------------
                                                                 




Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)