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Schistosoma mansoni
cluster # 10459 cluster # 10459       Sequences # 16       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10459#0 length = 848 sequences # 9  
consensus_10459#1 length = 734 sequences # 3  
consensus_10459#2 length = 512 sequences # 3  
consensus_10459#3 length = 324 sequences # 1  

consensusID : consensus_10459#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 848
fasta sequence
                              [ACACTAAAAGGATCTTCTGGAAAGTAGTAACCTCCACTTACAACATTGGCAGGACCATTAGAAGCAGCAGCTTCATTCGATTTAGATCCTTGTGTTGGGTTGGTAACTGGATATGGTGCATTCTCACCTACAGTTGTTGAGTTAGTAGAATAAGGTGTTGTGTACTGACTAGTAGCAGCAGATCCAAAATCATTAGCCATTGTAGTAGGTGTTGCACCAGGATATGGAGGTGGTGCTCTGACTTGGTAGAGTGTTTCTGCTTGAGGTACAGTGAATGCTTCATGTGGTCGTACAAATCCATAGTATGGATCATTGTAAGGCGCAGAATAAGCTGGTGGTGGACAAGCATAATACTGGCCTGCACCATTCATATCTGCTACAGATAAATATGCATTTGGCGGTTTGAAATGTTGTTTTGCAGAACATGCACGTCTGCCTAGTTCGATTAATGTTGTGCCAAATTCAATTGCACCACCCTTTTTGAATGTTAGTGAGAATTTTGCTTCGCCCTGCCAGCCACCGTTCGGTTCAGCCGTAATTATACCTTCTACACGATTCGCACCAAACACAGGTTGTTTAATATCAACCTCTTTCATATT-AACAAATGGCATACTGAATGACAGTACGCCTGATGATGCTTTTT-TGTTGATAAAAATTACTCTGTGTGAAGTCAGGTACAAACGTCCCATATGTGAAAACTTGAGAAACTGACCATCGAGTTCTACATGACATCCATCGTAATAAATTAACATCCTTTCTCCATAAAATAGAACAACACCATTGCCGTTCGCGGAGTGACTTTGATTCATAGACATTCCGATATGGTACCCGGTTTGAATAGCTGGTAG]

[+] EMBL CD117408             [ACACTAAAAGGATCTTCTGGAAAGTAGTAACCTCCACTTACAACATTGGCAGGACCATTAGAAGCAGCAGCTTCATTCGATTTAGATCCTTGTGTTGGGTTGGTAACTGGATATGGTGCATTCTCACCTACAGTTGTTGAGTTAGTAGAATAAGGTGTTGTGTACTGACTAGTAGCAGCAGATCCAAAATCATTAGCCATTGTAGTAGGTGTTGCACCAGGATATGGAGGTGGTGCTCTGACTTGGTAGAGTGTTTCTGCTTGAGGTACAGTGAATGCTTCATGTGGTCGTACAAATCCATAGTATGGATCATTGTAAGGCGCAGAATAAGCTGGTGGTGGACAAGCATAATACTGGCCTGCACCATTCATATCTGCTACAGATAAATATGCATTTGGCGGTTTGAAATGTTGTTTTGCAGAACATGCACGTCTGCCTAGTTCGATTAATGTTGTGCCAAATTCAATTGCACCACCCTTTTTGAATGTTAGTGAGAACTTTGCTTCGCCCTGCCAGCCACCGTTCGGTTCAGCCGTAATTATACCTTCTACACGATTCGCACCANACA                                                                                                                                                                                                                                                                                          ]
[+] EMBL CD117459             [ACACTAAAAGGATCTTCTGGAAAGTAGTAACCTCCACTTACAACATTGGCAGGACCATTAGAAGCAGCAGCTTCATTCGATTTAGATCCTTGTGTTGGGTTGGTAACTGGATATGGTGCATTCTCACCTACAGTTGTTGAGTTAGTAGAATAAGGTGTTGTGTACTGACTAGTAGCAGCAGATCCAAAATCATTAGCCATTGTAGTAGGTGTTGCACCAGGATATGGAGGTGGTGCTCTGACTTGGTAGAGTGTTTCTGCTTGAGGTACAGTGAATGCTTCATGTGGTCGTACAAATCCATAGTATGGATCATTGTAAGGCGCAGAATAAGCTGGTGGTGGACAAGCATAATACTGGCCTGCACCATTCATATCTGCTACAGATAAATATGCATTTGGCGGTTTGAAATGTTGTTTTGCAGAACATGCACGTCTGCCTAGTTCGATTAATGTTGTGCCAAATTCAATTGCACCACCCTTTTTGAATGTTAGTGAGAACTTTGCTTCGCCCTGCCAGCCACCGTTCGGTTCAGCCGTAATTATACCT                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CD117499             [ACACTAAAAGGATCTTCTGGAAAGTAGTAACCTCCACTTACAACATTGGCAGGACCATTAGAAGCAGCAGCTTCATTCGATTTAGATCCTTGTGTTGGGTTGGTAACTGGATATGGTGCATTCTCACCTACAGTTGTTGAGTTAGTAGAATAAGGTGTTGTGTACTGACTAGTAGCAGCAGATCCAAAATCATTAGCCATTGTAGTAGGTGTTGCACCAGGATATGGAGGTGGTGCTCTGACTTGGTAGAGTGTTTCTGCTTGAGGTACAGTGAATGCTTCATGTGGTCGTACAAATCCATAGTATGGATCATTGTAAGGCGCAGAATAAGCTGGTGGTGGACAAGCATAATACTGGCCTGCACCATTCATATCTGCTACAGATAAATATGCATTTGGCGGTTTGAAATGTTGTTTTGCAGAACATGCACGTCTGCCTAGTTCGATTAATGTTGTGCCAAATTCAATTGCACCACCCTTTTTGAATGTTAGTGAGAACTTTGCTTCGCCCTGCCAG                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL BG932499             [                                                 aAGGACCATTAGAAGCAGCAGCTTCATTCGATTTAGATCCTTGTGTTGAGTTCGTAACTGGATATGGTGCATTCTCACCTACAGTTGTTGAGTTAGCAGGATAAGGTGTTGTGTACTGACTAGTAGCAGCAGACCCAAAATCATTAGCCATTGTAGTAGGTGTTGCACCAGGATATGGAGGTGGTGCTCTGACTTGGTAGAGTGTTTCTGCTTGAGGTACAGTGAATGCTTCATGTGGTCGTACAAATCCATAGTATGGATCATTGTAAGGCGCAGAATAAGCTGGTGGGGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL CD180205             [                                                                                                                ATGGTGCATTCTCACCTACAGTTGTTGAGTTAGTAGGATAAGGTGTTGTGTACTGACTAGTAGCTGCAGATCCAAAATCATTAGCCATTGTAGTAGGTGTTGCACCAGGATATGGAGGTGGTGCTCTGACTTGGTAGAGTGTTTCTGCTTGAGGTACAGTGAATGCTTCATGTGGTCGTACAAATCCATAGTATGGATCATTGTAAGGCGCAGAATAAGCTGGTGGTGGACAAGCATAATACTGGCCTGCACCATTCATATCTGCTACAGATAAATATGCATTTGGCGGTTTGAAATGTTGTTTTGCAGAACATGCACGTCTGCCTAGTTCGATTAATGTTGTGCCAAATTCAATTGCACCACCCTTTTTGAATGTTAGTGAGAATTTTGCTTCGCCCTGCCAGCCACCGTTCGGTTCAGCCGTAATTATACCTTCTACACGATTCGCACCAAACACAGGTTGTTTAATATGAAAGAGGTTGATATTAAACAAtcagt                                                                                                                                                                                                                                                ]
[-] EMBL CD132948             [                                                                                                                                                                                                                                          GCTCTGACTTGGTAGAGTGTTTCTGCTTGAGGTACAGTGAATGCTTCATGTGGTCGTACAAATCCATAGTATGGATCATTGTAAGGCGCAGAATAAGCTGGTGGTGGACAAGCATAATACTGGCCTGCACCATTCATATCTGCTACAGATAAATATGCATTTGGCGGTTTGAAATGTTGTTTTGCAGAACATGCACGTCTGCCTAGTTCGATTAATGTTGTGCCAAATTCAATTGCACCACCCTTTTTGAATGTTAGTGAGAATATTGCTTCGCCCTGCCAGCCACCGTTCGGTTCAGCCGTAATTATACCTTCTACACGATTCGCACCAAACACAGGTTGTTTAATATCAACCTCTTTCATATT AACAAATGGCATACTGAATGACAGTACGCCTGATGATGCTTTTT TGTTGATAAAAATTACTCTGTGTGAAGTCAGGTACAAACGTCCCATATGTGAAAACTTGAGAAACTGACCATCGAGTTCTACATGACATCCATCGTAATAAATTAACAT                                                                                                ]
[-] EMBL CD159315             [                                                                                                                                                                                                                                                               TCTGCTTGAGGTACAGTGAATGCTTCATGTGGTCGTACAAATCCATAGTATGGATCATTGTAAGGCGCAGAATAAGCTGGTGGTGGACAAGCATAATACTGGCCTGCACCATTCATATCTGCTACAGATAAATATGCATTTGGCGGTTTGAAATGTTGTTTTGCAGAACATGCACGTCTGCCTAGTTCGATTAATGTTGTGCCAAATTCAATTGCACCACCCTTTTTGAATGTTAGTGAGAATTTTGCTTCGCCCTGCCAGCCACCGTTCGGTTCAGCCGTAATTATACCTTCTACAC                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CD170762             [                                                                                                                                                                                                                                                                                GAATGCTTCATGTGGTCGTACAAATCCATAGTATGGATCATTGTAAGGCGCAGAATAAGCTGGTGGTGGACAAGCATAATACTGGCCTGCACCATTCATATCTGCTACAGATAAATATGCATTTGGCGGTTTGAAATGTTGTTTTGCAGAACATGCACGTCTGCCTAGTTCGATTAATGTTGTGCCAAATTCAATTGCACCACCCTTTTTGAATGTTAGTGAGAATNTTGCTTCGCCCTGCCAGCCACCGTTCGGTCCAGCCGTAATTATACCTTCTACA                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CD086207             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               tcCAGCCGTAATTATACCTTCTACACGATTCGCACCAAACACAGGTTGTTTAATATCAACCTCTTTCATATT AACAAATGGCATACTGAATGACAGTACGCCTGATGATGCTTTTTGTGTTGATAAAAATTACTCTGTGTGAAGTCAGGTACAAACGTCCCATATGTGAAAACTTGAGAAACTGACCATCGAGTTCTACATGACATCCATCGTAATAAATTAACATCCTTTCTCCATAAAATAGAACAACACCATTGCCGTTCGCGGAGTGACTTTGATTCATAGACATTCCGATATGGTACCCGGTTTGAATAGCTGGTAG]


>consensus_10459#0 ACACTAAAAGGATCTTCTGGAAAGTAGTAACCTCCACTTACAACATTGGCAGGACCATTA GAAGCAGCAGCTTCATTCGATTTAGATCCTTGTGTTGGGTTGGTAACTGGATATGGTGCA TTCTCACCTACAGTTGTTGAGTTAGTAGAATAAGGTGTTGTGTACTGACTAGTAGCAGCA GATCCAAAATCATTAGCCATTGTAGTAGGTGTTGCACCAGGATATGGAGGTGGTGCTCTG ACTTGGTAGAGTGTTTCTGCTTGAGGTACAGTGAATGCTTCATGTGGTCGTACAAATCCA TAGTATGGATCATTGTAAGGCGCAGAATAAGCTGGTGGTGGACAAGCATAATACTGGCCT GCACCATTCATATCTGCTACAGATAAATATGCATTTGGCGGTTTGAAATGTTGTTTTGCA GAACATGCACGTCTGCCTAGTTCGATTAATGTTGTGCCAAATTCAATTGCACCACCCTTT TTGAATGTTAGTGAGAATTTTGCTTCGCCCTGCCAGCCACCGTTCGGTTCAGCCGTAATT ATACCTTCTACACGATTCGCACCAAACACAGGTTGTTTAATATCAACCTCTTTCATATTA ACAAATGGCATACTGAATGACAGTACGCCTGATGATGCTTTTTTGTTGATAAAAATTACT CTGTGTGAAGTCAGGTACAAACGTCCCATATGTGAAAACTTGAGAAACTGACCATCGAGT TCTACATGACATCCATCGTAATAAATTAACATCCTTTCTCCATAAAATAGAACAACACCA TTGCCGTTCGCGGAGTGACTTTGATTCATAGACATTCCGATATGGTACCCGGTTTGAATA GCTGGTAG



consensusID : consensus_10459#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 734
fasta sequence
                              [TATCAAAAAACAGCAACAGTTTGGCCCTGCTCTTTCTGGAACTGGTCCTTCTTCTTCTCCATCTTCTACTTCTTCTGCATTAGCATTACAGCAACATCAACAACAATTGAATACTGCAATGGCGGCTTTTCAACCACCACCACCGCAATCTCATCAACAACAGTCACATCAACCACAGACCCTTCAAAATATTTTACCTATTCATAATCAACCTAATGTTACACAATCGAATAATATTACCAGTGGTGGATTAAATGCAGATTTAACTGGTGGTAGTACGTTATTCACTGGACATTTGCTACGCTACGAAGACGTGAACATTCGAAGTATTCGTGCTTGTTTAAATCTTGATGAATTATTAACAAATGCCGCAATCAATAGTCGAAATGGTGGTACTAATTCAAATGGAATTACTGCCGCATTTGCATTGCTTCAAGCTAATCCTCGACTACGTGGGTTAATTGAACCTGCTGTTCTACGCGCAATCAATGAATTAACCACTCCAGTATTCGAACGTTGTGCACGTATCACAGTTACAACTG-TTGTCGCTATTGTCCGAAAAGATTTTGCATTGGATCCAGATCCTTCAC-GTATGTTGTGTGCAGCTTGTCAAATGATTCGACATCTTGCCGCTGGAATGTCATTAATTACTGCAAGAGAAGCTTTAGGCATGTCACTTGTGACAAGCTTAAAGAATATCATCCTTACTGAAGTTCAATCTGCCACCGTACAAG]

[+] EMBL CD093800             [TATCAAAAAACAGCAACAGTTTGGCCCTGCTCTTTCTGGAACTGGTCCTTCTTCTTCTCCATCTTCTACTTCTTCTGCATTAGCATTACAGCAACATCAACAACAATTGAATACTGCAATGGCGGCTTTTCAACCACCACCACCGCAATCTCATCAACAACAGTCACATCAACCACAGACCCTTCAAAATATTTTACCTATTCATAATCAACCTAATGTTACACAATCGAATAATATTACCAGTGGTGGATTAAATGCAGATTTAACTGGTGGTAGTACGTTATTCACTGGACATTTGCTACGCTACGAAGACGTGAACATTCGAAGTATTCGTGCTTGTTTAAATCTTGATGAATT                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CD163683             [                                                                                                                                                                                                                                                                                             CACTGGACATTTGCTACGCTACGAAGACGTGAACATTCGAAGTATTCGTGCTTGTTTAAATCTTGATGAATTATTAACAAATGCCGCAATCAATAGTCGAAATGGTGGTACTAATTCAAATGGAATTACTGCCGCATTTGCATTGCTTCAAGCTAATCCTCGACTACGTGGGTTAATTGAACCTGCTGTTCTACGCGCAATCAATGAATTAACCACTCCAGTATTCGAACGTTGTGCACGTATCACAGTTACAACTG TTGTCGCTATTGTCCGAAAAGATTTTGCATTGGATCCAGATCCTTCAC GTATGTTGTGTGCAGCTTGTCAAATGATTCG                                                                                                                 ]
[+] EMBL CD061271             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    GTTACAACTGNTTGTCGCTATTGTCCGAAAAGATTTTGCATTGGATCCAGATCCTTCACGGTATGTTGTATGCAGCTTGTCAAATGATTCGACATCTTGCCGCTGGAATGTCATTAATTACTGCAAGAGAAGCTTTAGGCATGTCACTTGTGACAAGCTTAAAGAATATCATCCTTACTGAAGTTCAATCTGCCACCGTACAAG]


>consensus_10459#1 TATCAAAAAACAGCAACAGTTTGGCCCTGCTCTTTCTGGAACTGGTCCTTCTTCTTCTCC ATCTTCTACTTCTTCTGCATTAGCATTACAGCAACATCAACAACAATTGAATACTGCAAT GGCGGCTTTTCAACCACCACCACCGCAATCTCATCAACAACAGTCACATCAACCACAGAC CCTTCAAAATATTTTACCTATTCATAATCAACCTAATGTTACACAATCGAATAATATTAC CAGTGGTGGATTAAATGCAGATTTAACTGGTGGTAGTACGTTATTCACTGGACATTTGCT ACGCTACGAAGACGTGAACATTCGAAGTATTCGTGCTTGTTTAAATCTTGATGAATTATT AACAAATGCCGCAATCAATAGTCGAAATGGTGGTACTAATTCAAATGGAATTACTGCCGC ATTTGCATTGCTTCAAGCTAATCCTCGACTACGTGGGTTAATTGAACCTGCTGTTCTACG CGCAATCAATGAATTAACCACTCCAGTATTCGAACGTTGTGCACGTATCACAGTTACAAC TGTTGTCGCTATTGTCCGAAAAGATTTTGCATTGGATCCAGATCCTTCACGTATGTTGTG TGCAGCTTGTCAAATGATTCGACATCTTGCCGCTGGAATGTCATTAATTACTGCAAGAGA AGCTTTAGGCATGTCACTTGTGACAAGCTTAAAGAATATCATCCTTACTGAAGTTCAATC TGCCACCGTACAAG



consensusID : consensus_10459#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 512
fasta sequence
                              [GTTAGTAGGATAAGGTGTTGTGTACTGACTAGTAGCAGCAGATCCAAGATCATTAGCCATTGTAGTAGGTGTTGCACCAGGATATGGAGGTGGTGCTCTGACTTGGTAGAGTGTTTCTGCTTGAGGTACAGTGAATGCTTCATGTGGTCGTACAAATCCATAGTATGGATCATTGTAAGGCGCAGAATAAGCTGGTGGTGGACAAGCATAATACTGGCCTGCACCATTCATATCTGCTACAGATAAATATGCATTTGGCGGTTTGAAATGTTGTTTTGCAGAACATGCACGTCTGCCTAGTTCGATTAATGTTGTGCCAAATTCAA-TTGCACCACCCTTTTTGAATGTTAGTGAGAATTTTGCTTCGCCCTGCCAGCCACCGTGTCGGTTCAGCCGTAATATACCTTCTACACGATTCGCACCAAACACAGGTTGTTTAATATCAACCTCTTTCATATTAACAAATGGCATACTGAATGACAGTACGCCCTCGTGCCGAATTCTGTCCTCGA]

[-] EMBL CD083360             [GTTAGTAGGATAAGGTGTTGTGTACTGACTAGTAGCAGCAGATCCAAGATCATTAGCCATTGTAGTAGGTGTTGCACCAGGATATGGAGGTGGTGCTCTGACTTGGTAGAGTGTTTCTGCTTGAGGTACAGTGAATGCTTCATGTGGTCGTACAAATCCATAGTATGGATCATTGTAAGGCGCAGAATAAGCTGGTGGTGGACAAGCATAATACTGGCCTGCACCATTCATATCTGCTACAGATAAATATGCATTTGGCGGTTTGAAATGTTGTTTTGCAGAACATGCACGTCTGCCTAGTTCGATTAATGTTGTGCCAAATTCAA TTGCACCACCCTTTTTGAATGTTAGTGAGAATTTTGCTTCGCCCTGCCAGCCACCGTGTCGGTTCAGCCGTAATATACCTTCTACACGATTCGCACCAAACACAGGTTGTTTAATATCAACCTCTTTCATATTAACAAATGGCATACTGAATGACAGTACGCCCTCGTGCCGAATTCTGTCCTCGA]
[-] EMBL CD182056             [                                                                                                     CTTGGTAGAGTGTTCTTGCTTGAGGTACAGTGAATGCTTCATGTGGTCGTACAAATCCATAGTATGGATCATTGTAAGGCGCAGAATAAGCTGGTGGTGGACAAGCATAATACTGGCCTGCACCATTCATATCTGCTACAGATAAATATGCATTTGGCGGTTTGAAATGTTGTTTTGCAGAACATGCACGTCTGCCTAGTTCGATTAATGTTGTGCCAAATTCAA TTGCACCACCC TTTTGAATGTTAGTGAGAATTTTGCTTCGCCCTGCCAGC                                                                                                                                       ]
[+] EMBL CD112521             [                                                                                                                   tgTGCTTGAGGTACAGTGAATGCTTCATGTGGTCGTACAAATCCATAGTATGGATCATTGTAAGGCGCAGAATAAGCTGGTGGTGGACAAGCATAATACTGGCCTGCACCATTCATATCTGCTACAGATAAATATGCATTTGGCGGTTTGAAATGTAGTTTTGCAGAACATGCACGTCTGCCTAGTTCGATTAATGTTGTGCCAAATTCAATTTGCACCACCCTTTTT                                                                                                                                                                          ]


>consensus_10459#2 GTTAGTAGGATAAGGTGTTGTGTACTGACTAGTAGCAGCAGATCCAAGATCATTAGCCAT TGTAGTAGGTGTTGCACCAGGATATGGAGGTGGTGCTCTGACTTGGTAGAGTGTTTCTGC TTGAGGTACAGTGAATGCTTCATGTGGTCGTACAAATCCATAGTATGGATCATTGTAAGG CGCAGAATAAGCTGGTGGTGGACAAGCATAATACTGGCCTGCACCATTCATATCTGCTAC AGATAAATATGCATTTGGCGGTTTGAAATGTTGTTTTGCAGAACATGCACGTCTGCCTAG TTCGATTAATGTTGTGCCAAATTCAATTGCACCACCCTTTTTGAATGTTAGTGAGAATTT TGCTTCGCCCTGCCAGCCACCGTGTCGGTTCAGCCGTAATATACCTTCTACACGATTCGC ACCAAACACAGGTTGTTTAATATCAACCTCTTTCATATTAACAAATGGCATACTGAATGA CAGTACGCCCTCGTGCCGAATTCTGTCCTCGA



consensusID : consensus_10459#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 324
fasta sequence
                              [AGATAGAACTTCAGTAAGGATGATATTCTATAAGCTTGTCACAAGTGACATGCCTAACGCTATCTCTTGCAGTAATTAATGACATTCCAGCGGCAAGATGTCGAATCATTTGACAAGCTGCATACAACATACGTGAAGGATCTAAATCGAATGAAGCTGCTGCTTCTAATGGTCCTGCCAATGTTGTAAGTGGAGGTTACTACTTTCCAGAAGATCCTTTTAGTGTATACGTACAACCTAATGCGCCAAATTATCCAGGCAATCCCCCATCTTATCCGGGTAATACTCAAGATAATCATGATCAAACAGCTCCCTATCCAACTG]

[+] EMBL CD061344             [AGATAGAACTTCAGTAAGGATGATATTCTATAAGCTTGTCACAAGTGACATGCCTAACGCTATCTCTTGCAGTAATTAATGACATTCCAGCGGCAAGATGTCGAATCATTTGACAAGCTGCATACAACATACGTGAAGGATCTAAATCGAATGAAGCTGCTGCTTCTAATGGTCCTGCCAATGTTGTAAGTGGAGGTTACTACTTTCCAGAAGATCCTTTTAGTGTATACGTACAACCTAATGCGCCAAATTATCCAGGCAATCCCCCATCTTATCCGGGTAATACTCAAGATAATCATGATCAAACAGCTCCCTATCCAACTG]


>consensus_10459#3 AGATAGAACTTCAGTAAGGATGATATTCTATAAGCTTGTCACAAGTGACATGCCTAACGC TATCTCTTGCAGTAATTAATGACATTCCAGCGGCAAGATGTCGAATCATTTGACAAGCTG CATACAACATACGTGAAGGATCTAAATCGAATGAAGCTGCTGCTTCTAATGGTCCTGCCA ATGTTGTAAGTGGAGGTTACTACTTTCCAGAAGATCCTTTTAGTGTATACGTACAACCTA ATGCGCCAAATTATCCAGGCAATCCCCCATCTTATCCGGGTAATACTCAAGATAATCATG ATCAAACAGCTCCCTATCCAACTG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10459#0      -ACACTAAAAGGATCTTCTGGAAAGTAGTAACCTCCACTTACAACATTGGCAGGACCATT 59
consensus_10459#2      ------------------------------------------------------------
consensus_10459#3      ------------------------------------------------------------
consensus_10459#1      TATCAAAAAACAGCAACAGTTTGGCCCTGCTCTTTCTGGAACTGGTCCTTCTTCTTCTCC 60
                                                                                   

consensus_10459#0      AGAAGCAGCAGCTTCATTCGATTTAGATCCTTGTGTTGGGTTGGTAACTGGATATGGTGC 119
consensus_10459#2      ------------------------------------------------------------
consensus_10459#3      ------------------------------------------------------------
consensus_10459#1      ATCTTCTACTTCTTCTGCATTAGCATTACAGCAACATCAACAACAATTGAATACTGCAAT 120
                                                                                   

consensus_10459#0      ATTCTCACCTACAGTTGTTGAGTTAGTAGAATAAGGTGTTGTGTACTGACTAGTAGCAGC 179
consensus_10459#2      ---------------------GTTAGTAGGATAAGGTGTTGTGTACTGACTAGTAGCAGC 39
consensus_10459#3      ------------------------------------------------------------
consensus_10459#1      GGCGGCTTTTCAACCACCACCACCGCAATCTCATCAACAACAGTCACATCAACCACAGAC 180
                                                                                   

consensus_10459#0      AGATCCAAAATCATTAGCCATTGTAGTAGGTGTTGCACCAGGATATGGAGGTGGTGCTCT 239
consensus_10459#2      AGATCCAAGATCATTAGCCATTGTAGTAGGTGTTGCACCAGGATATGGAGGTGGTGCTCT 99
consensus_10459#3      ------------------------------------------------------------
consensus_10459#1      CCTTCAAAATATTTTACCTATTCATAATCAACCTAATGTTACACAATCGAATAATATTAC 240
                                                                                   

consensus_10459#0      GACTTGGTAGAGTGTTTCTGCTTGAGGTACAGTGAATGCTTCATGTGGTCGTACAAATCC 299
consensus_10459#2      GACTTGGTAGAGTGTTTCTGCTTGAGGTACAGTGAATGCTTCATGTGGTCGTACAAATCC 159
consensus_10459#3      ------------AGATAGAACTTCAG-TAAGGATGATATTCTATAAGCTTGTCACAA--- 44
consensus_10459#1      CAGTGGTGGATTAAATGCAGATTTAACTGGTGGTAGTACGTTATTCACTGGACATTTGCT 300
                                      *     ** *  *   *    *     **    * *         

consensus_10459#0      ATAGTATGGATCATTGTAAGGCGCAGAATAAGCTGGTGGTGGACAAGCATAATACTGGCC 359
consensus_10459#2      ATAGTATGGATCATTGTAAGGCGCAGAATAAGCTGGTGGTGGACAAGCATAATACTGGCC 219
consensus_10459#3      GTGACATGCCTAACGCTATCTCTTGCAGTAA-TTAATGACATTCCAGCGGCAAGATGTC- 102
consensus_10459#1      ACGCTACGAA-GACGTGAACATTCGAAGTA--TTCGTGCTTGTTTAA-ATCTTGATG--- 353
                            * *    *    *        * **   *  **       *         **   

consensus_10459#0      TGCACCATTCATATCTGCTACAGATAAATATGCATTTGGCGGTTTGAAATGTTGTTTTGC 419
consensus_10459#2      TGCACCATTCATATCTGCTACAGATAAATATGCATTTGGCGGTTTGAAATGTTGTTTTGC 279
consensus_10459#3      -GAATCATTTG-ACAAGCTGCATACAA---CATACGTGAAGGATCTAAATCGAAT----- 152
consensus_10459#1      --AATTATTAACAAATGCCGCAATCAATAGTCGAAATGGTGGTACTAATTCAAATGGAAT 411
                          *  ***   *   **  **   **      *  **  **    ** *    *     

consensus_10459#0      AGAACATGCACGTCTGCCTAGTTCG-ATTAATGTT-------GTGCCAAATTCAATTGCA 471
consensus_10459#2      AGAACATGCACGTCTGCCTAGTTCG-ATTAATGTT-------GTGCCAAATTCAATTGCA 331
consensus_10459#3      -GAAGCTGCTGCTTCTAATGGTCCT-GCCAATGTT-------GT----AAGTGGAGGTTA 199
consensus_10459#1      TACTGCCGC-ATTTGCATTGCTTCAAGCTAATCCTCGACTACGTGGGTTAATTGAACCTG 470
                              **   *     *  * *     ***  *       **     * *  *     

consensus_10459#0      CCACCCTTTTTGAATGTTAGTGAGAATTTTGCTTCGCCCTGCCAGCCACCGT-TCGGTTC 530
consensus_10459#2      CCACCCTTTTTGAATGTTAGTGAGAATTTTGCTTCGCCCTGCCAGCCACCGTGTCGGTTC 391
consensus_10459#3      CTAC--TTTCCAGAAGATCCT-----TTTAGTGTATACGTACAACCTAATGCGCCAAATT 252
consensus_10459#1      CTGTTCTACGCGCAATCAATGAATTAACCACTCCAGTATTCGAACGTTGTGC-ACGTATC 529
                       *     *      *                         *   *      *   *   * 

consensus_10459#0      AGCCGTAATTATACCTTCTACACGATTCGCACCAAACACAGGTTG-TTTAATATCAACCT 589
consensus_10459#2      AGCCGTAAT-ATACCTTCTACACGATTCGCACCAAACACAGGTTG-TTTAATATCAACCT 449
consensus_10459#3      ATCCAGGCA---ATCCCCCATCTTATCCGGGTAATACTCAAGATA-ATCATGATCAAACA 308
consensus_10459#1      ACAGTTACAACTGTTGTCGCTATTGTCCGAAAAGATTTTGCATTGGATCCAGATCCTTCA 589
                       *                *       * **              *   *    ***   * 

consensus_10459#0      -CTTTCATATTAACAAATGGCATACTGAATGACAGTACGCCTGATGATGCTTTTTTGTTG 648
consensus_10459#2      -CTTTCATATTAACAAATGGCATACTGAATGACAGTACGCCCTCGTGCCGAATTCTGTCC 508
consensus_10459#3      -GCTCCCTATC--CAACTG----------------------------------------- 324
consensus_10459#1      CGTATGTTGTGTGCAGCTTGTCAAATGATTCGACATCTTGCCGCTGGAATGTCATTAATT 649
                              * *   **  *                                          

consensus_10459#0      ATAAAAATTACTCTGTGTGAAGTCAGGTACAAACGTCCCATATGTGAAAACTTGAGAAAC 708
consensus_10459#2      TCGA-------------------------------------------------------- 512
consensus_10459#3      ------------------------------------------------------------
consensus_10459#1      ACTGCAAGAGAAGCTTTAGGCATGTCACTTGTGACAAGCTTAAAGAATATCATCCTTACT 709
                                                                                   

consensus_10459#0      TGACCATCGAGTTCTACATGACATCCATCGTAATAAATTAACATCCTTTCTCCATAAAAT 768
consensus_10459#2      ------------------------------------------------------------
consensus_10459#3      ------------------------------------------------------------
consensus_10459#1      GAAGTTCAATCTGCCACCGTACAAG----------------------------------- 734
                                                                                   

consensus_10459#0      AGAACAACACCATTGCCGTTCGCGGAGTGACTTTGATTCATAGACATTCCGATATGGTAC 828
consensus_10459#2      ------------------------------------------------------------
consensus_10459#3      ------------------------------------------------------------
consensus_10459#1      ------------------------------------------------------------
                                                                                   

consensus_10459#0      CCGGTTTGAATAGCTGGTAG 848
consensus_10459#2      --------------------
consensus_10459#3      --------------------
consensus_10459#1      --------------------
                                           




Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)