These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10489#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 16 consensus length = 680 fasta sequence [CTTTGACCGTATCCGCCAAGGTCAACCCGGGCGGGCCCTGGA-GGTGTTCCGGA-TCTGGCGCAGCGAGATCAGCCTGAACATGGCGCG-CCAGCTGTTTTTCAATGCCGCGG--AACGCGAAGCCGTGGTGCGTGAACAACTGCGCCAGCTTTAGTTGATCCGGACCGGGGCGCGGCCAACCGCCATTCGGGAAACCTAACTATCGAAGCGCCCGAGCAGCGGCTGCGTTCGGGCTGTCGGCCTGGCCAGCAGCAGCTGCGCGGTGCCGATGCTGCGTTCGAGGAAACCGCCTTCGCAGTAGCACAGGTAGAACTCCCACAAACGCAGGAAATAATCGTCGTAGCCCAGTTCGCTCAGGCGCCCGTGGGCACGGCGGAAGTTCTCGTGCCACAGGCGCAGGGTGCGCGCGTAGTGCAGGCCGAAGTCCTCCATGTGCAGCAGGTTCATGTCGGTTTCGCGGCTGACCACCTCGAGCATCTTCTGCACGCTGGGCAGGGCGCCACCGG-GGAAGATATAACGCTGGATAAAGTCGACCGTGCTCCTGGCCTGCTCATAACGTTGTTCGCGGATGGTGATGGCCTGCAGCAGCATCAGCCCATCGCTCTTGAGCAGGTGCGCGCATTGCTTG-AAGT-AGTTA-TCGAGGAACTGATGGCCGACGGCTTCGATCATTTCGATGGACACCA] [+] EMBL CD162454 [CTTTGACCGTATCCGCCAAGGTCAACCCGGGCGGGCCCTGGA GGTGTTCCGGA TCTGGCGCAGCGAGATCAGCCTGAACATGGCGCA CCAGCCGTTTTTCAATGCCGCGG AACGCGAAGCCGTGGTGCGTGAACAACTGCGCCAGCTTTAGTTGATCCGGACCGGGGCGCGGCCAACCGCCATTCGGGAAACCTAACTATCGAAGCGCCCGAGCAGCGGCTGCGTTCGGGCTGTCGGCCTGGCCAGCAGCAGCTGCGCGGTGCCGATGCTGCGTTCGAGGAAACCGCCTTCGCAGTAGCACAGGTAGAACTCCCACAAACGCAGGAAATAATCGTCGTAGCCCAGTTCGCTCAGGCGCCCGTGGGCACGGCGGAAGTTCTCGTGCCACAGGCGCAGGGTGCGCGCGTAGTGCAGGCCGAAGTCCTCCATGTGCAGCAGGTTCATGTCGGTTTCGCGGCTGACCACCTCGAGCATCTTCTGCACGCTGGGCAGGGCGCCACCGG GGAAGATATAACGCTGGATAAAGTCGACCGTGCTCCTGGCCTGCTCATAACGTTGTTCGCGGATGGTGATGGCCTGCAGCAGCATCAGCCCATCGCTCTTGAGCAGGTGCGCGCATTGCTTG AAGT AGTTA TCGAGGAACTGATGGCCGACGGCTTCGATCATTTCGATGGACACCA] [+] EMBL CD162415 [CTTTGACCGTATCCGCCAAGGTCAACCCGGGCGGGCCCTGGA GGTGTTCCGGA TCTGGCGCAGCGAGATCAGCCTGAACATGGCGCG CCAGCTGTTTTTCAATGCCGCGG AACGCGAAGCCGTGGTGCGTGAACAACTGCGCCAGCTTTAGTTGATCCGGACCGGGGCGCGGCCAACCGCCATTCGGGAAACCTAACTATCGAAGCGCCCGAGCAGCGGCTGCGTTCGGGCTGTCGGCCTGGCCAGCAGCAGCTGCGCGGTGCCGATGCTGCGTTCGAGGAAACCGCCTTCGCAGTAGCACAGGTAGAACTCCCACAAACGCAGGAAATAATCGTCGTAGCCCAGTTCGCTCAGGCGCCCGTGGGCACGGCGGAAGTTCTCGTGCCACAGGCGCAGGGTGCGCGCGTAGTGCAGGCCGAAGTCCTCCATGTGCAGCAGGTTCATGTCGGTTTCGCGGCTGACCACCTCGAGCATCTTCTGCACGCTGGGCAGGGCGCCACCGC GGAAGATATAACGCTGGATAAAGTCGACCGTGCTCCTGGCCTGCTCATAACGTTGTTCGCGGATGGTGATGGCCTGCAGCAGCATCAGCCCATCGCTCTTGA CAGGTGCGCGCATTGCTTG TAGTCAG TA TCGATGAACTGATGGCCGACGGCTTCNATCATTTCGATGGA ] [+] EMBL CD162460 [CTTTGAACGTATCCGCCAAGGTCAACCCGGGCGGGCCCTGGA GGTGTTCCGGA TCTGGCGCAGCGAGATCAGCCTGAACATGGCGCG CCAGCTGTTTTTCAATGCCGCGG AACGCGAAGCCGTGGTGCGTGAACAACTGCGCCAGCTTTAGTTGATCCGGACCGGGGCGCGGCCAACCGCCATTCGGGAAACCTAACTATCGAAGCGCCCGAGCAGCGGCTGCGTTCGGGCTGTCGGCCT GCCAGCAGCAGCTGCGCGGTGCCGATGCTGCGTTCGAGGAAACCGCCTTCGCAGTAGCGCAGGTAGAACTCCCACAAACGCAGGAAATAATCGTCGTAGCCCAGTTCGCTCAGGCGCCCGTGGGCACGGCGGAAGTTCTCGTGCCACAGGCGCAGGGTGCGCGCGTAGTGCAGGCCGAAGTCCTCCATGTGCAGCAGGTTCATGTCGGTTTCGCGGCTGACCACCTCGAGCATCTTCTGCACGCTGGGCAGGGCGCCACCGG GGAAGATATAACGCTGGATAAAGTCGACCGTGCTCCTGGCCTGCTCATAACGTTGTTCGCGGATGGTGAGGGCCTGCAGCAGCATCAGCCCATCGCTCTTGAGCAGGTGCGCGCATTGCTTN GAGT AGTTA TCGAGGAACTGATGGCCGACGGCTTCGATCATTTCGATGGA ] [+] EMBL CD162426 [CTTTGACCGTATCCGCCAAGGTCAACCCGGGCGGGCCCTGGA GGTGTTCCGGA TCTGGCGCAGCGAGATCAGCCTGAACATGGCGCG CCAGCTGTTTTTCAATGCCGCGG AACGCGAAGCCGTGGTGCGTGAACAACTGCGCCAGCTTTAGTTGATCCGGACCGGGGCGCGGCCAACCGCCATTCGGGAAACCTAACTATCGAAGCGCCCGAGCAGCGGCTGCGTTCGGGCTGTCGGCCTGGCCAGCAGCAGCTGCGCGGTGCCGATGCTGCGTTCGTGGAAACCGCCTTCGCAGTAGCACAGGTAGAACTCCCACAAACGCAGGAAATAATCGTCGTAGCCCAGTTCGCTCAGGCGCCCGTGGGCACGGCGGAAGTTCTCGTGCCACAGGCGCAGGGTGCGCGCGTAGTGCAGGCCGAAGTCCTCCATGTGCAGCAGGTTCATGTCGGTTTCGCGGCTGACCACCTCGAGCATCTTCTGCACGCTGGGCAGGGCGCCACCGG NGAAGATATAACGCTGGATAAAGTCGACCGTGCTCCTGGCCTGCTCATAACGTTGTTCGCGGATGGTGATGGCCTGCAGCAGCATCAGCCCATCGCTCTTGAGCAGGTGCGCGCATTGCTTGAAAGT AG TA TCGAGGAACTGATGGCCGACGGCTTCGATCATTTCGATGGA ] [+] EMBL CD162458 [CTTTGACCGTATCCGCCAAGGTCAACCCGGGCGGGCCCTGGA GGTGTTCCGGA TCTGGCGCAGCGAGATCAGCCTGAACATGGCGCG CCAGCTGTTTTTCAATGCCGCGG AACGCGAAGCCGTGGTGCGTGAACAACTGCGCCAGCTTTAGTTGATCCGGACCGGGGCGCGGCCAACCGCCATTCGGGAAACCTAACTATCGAAGCGCCCGAGCAGCGGCTGCGTTCGGGCTGTCGGCCTGGCCAGCAGCAGCTGCGCGGTGCCGATGCTGCGTTCGAGGAAACCGCCTTCGCAGTAGCACAGGTAGAACTCCCACAAACGCAGGAAATAATCGTCGTAGCCCAGTTCGCTCAGGCGCCCGTGGGCACGGCGGAAGTTCTCGTGCCACAGGCGCAGGGTGCGCGCGTAGTGCGGGCCGAAGTCCTCCATGTGCAGCAGGTTCATGTCGGTTTCGCGGCTGACCACCTCGAGCATCTTCTGCACGCTGGGCAGGGCGCCACCGG GGAAGATATAACGCTGGATAAAGTCGACCGTGCTCCTGGCCTGCTCATAACGTTGTTCGCGGATGGTGATGGCCTGCAGCAGCATCAGCCCATCGCTCTTGAACAGGTGCGCGCATTGCTTG GAGT AGTTATTCGA GAACTGATGGCCGA GGCTTCGATCATTTCGATGG ] [+] EMBL CD162448 [CTTTGACCGTATCCGCCAAGGTCAACCCGGGCGGGCCCTGGA GGTGTTCCGGA TCTGGCGCAGCGAGATCAGCCTGAACATGGCGCG CCAGCTGTTTTTCAATGCCGCGG AACGCGAAGCCGTGGTGCGTGAACAACTGCGCCAGCTTTAGTTGATCCGGACCGGGGCGCGGCCAACCGCCATTCGGGAAACCTAACTATCGAAGCGCCCGAGCAGCGGCTGCGTTCGGGCTGTCGGCCTGGCCAGCAGCAGCTGCGCGGTGCCGATGCTGCGTTCGAGGAAACCGCCTTCGCAGTAGCACAGGTAGAACTCCCACAAACGCAGGAAATAATCGTCGTAGCCCAGTTCGCTCAGGCGCCCGTGGGCACGGCGGAAGTTCTCGTGCCACAGGCGCAGGGTGCGCGCGTAGTGCAGGCCGAAGTCCTCCATGTGCAGCAGGTTCATGTCGGTTTCGCGGCTGACCACCTCGAGCATCTTCTGCACGCTGGGCAGGGCGCCACCGG NGAAGATATAACGCTGGATAAAGTCGACCGTGCTCCTGGCCTGCTCATAACGTTNGTCGCGGATGGTGATGGCCTGCAGCAGCATCAGCCCATCGCTCTTGAGCAGGTGCGCGCATTGCTTGAAAGT AG TA TCGAGGAACTGATGGCCGACGGCTTCGATCATTTCGATGGA ] [-] EMBL CD162431 [ TTTGACCGTATCCGCCAAGGTCAACCCGGGCGGGCCCTGGA GGTGTTCCGGA TCTGGCGCAGCGAGATCAGCCTGAACATGGCGCG CCAGCTGTTTTTCAATGCCGCGG AACGCGAAGCCGTGGTGCGTGAACAACTGCGCCAGCTTTAGTTGATCCGGACCGGGGCGCGGCCAACCGCCATTCGGGAAACCTAACTATCGAAGCGCCCGAGCAGCGGCTGCGTTCGGGCTGTCGGCCTGGCCAGCAGCAGCTGCGCGGTGCCGATGCTGCGTTCGAGGAAACCGCCTTCGCAGTAGCACAGGTAGAACTCCCACAAACGCAGGAAATAATCGTCGTAGCCCAGTTCGCTCAGGCGCCCGTGGGCACGGCGGAAGTTCTCGTGCCACAGGCGCAGGGTGCGCGCGTAGTGCAGGCCGAAGTCCTCCATGTGCAGCAGGTTCATGTCGGTTTCGCGGCTGACCACCTCGAGCATCTTCTGCACGCTGGGCAGGGCGCCACCGG GGAAGATATAACGCTGGATAAAGTCGACCGTGCTCCTGGCCTGCTCATAACGTTGTTCGCGGATGGTGATGGCCTGCAGCAGCATCAGCCCATCGCTCTTGAGCAGGTGCGCGCATTGCTTG AAGT AGTTA TCGAGGAACTGATGGCCGACGGCTTCGATCATTTCGATGGAC ] [-] EMBL CD162429 [ TTTGACCGTATCCGCCAAGGTCACCCCGGCGGGGNCCTGNA GGTGTTCCGGA TCTGGCGCAGCGAGATCAGCCTGAACATGGCGCG CCAGCTGTTTTTCAATGCCGCGG AACGCGAAGCCGTGGTGCGTGAACAACTGCGCCAGCTTTAGTTGATCCGGACCGGGGCGCGGCCAACCGCCATTCGGGAAACCTAACTATCGAAGCGCCCGAGCAGCGGCTGCGTTCGGGCTGTCGGCCTGGCCAGCAGCAGCTGCGCGGTGCCGATGCTGCGTTCGAGGAAACCGCCTTCGCAGTAGCACAGGTAGAACTCCCACAAACGCAGGAAATAATCGTCGTAGCCCAGTTCGCTCAGGCGCCCGTGGGCACGGCGGAAGTTCTCGTGCCACAGGCGCAGGGTGCGCGCGTAGTGCAGGCCGAAGTCCTCCATGTGCAGCAGGTTCATGTCGGTTTCGCGGCTGACCACCTCGAGCATCTTCTGCACGCTGGGCAGGGCGCCACCGG GGAAGATATAACGCTGGATAAAGTCGACCGTGCTCCTGGCCTGCTCATAACGTTGTTCGCGGATGGTGATGGCCTGCAGCAGCATCAGCCCATCGCTCTTGAGCAGGTGCGCGCATTGCTTG AAGT AGTTA TCGAGGAACTGATGGCCGACGGCTTCGATCATTTCGATGGAC ] [-] EMBL CD162412 [ TTTGACCGTATCCGCCAAGGTCACCCCGGGCGGGNCCTGGA GGTGTTCCGGA TCTGGCGCAGCGAGATCAGCCTGAACATGGCGCG CCAGCTGTTTTTCAATGCCGCGG AACGCGAAGCCGTGGTGCGTGAACAACTGCGCCAGCTTTAGTTGATCCGGACCGGGGCGCGGCCAACCGCCATTCGGGAAACCTAACTATCGAAGCGCCCGAGCAGCGGCTGCGTTCGGGCTGTCGGCCTGGCCAGCAGCAGCTGCGCGGTGCCGATGCTGCGTTCGAGGAAACCGCCTTCGCAGTAGCACAGGTAGAACTCCCACAAACGCAGGAAATAATCGTCGTAGCCCAGTTCGCTCAGGCGCCCGTGGGCACGGCGGAAGTTCTCGTGCCACAGGCGCAGGGTGCGCGCGTAGTGCAGGCCGAAGTCCTCCATGTGCAGCAGGTTCATGTCGGTTTCGCGGCTGACCACCTCGAGCATCTTCTGCACGCTGGGCAGGGCGCCACCGG GGAAGATATAACGCTGGATAAAGTCGACCGTGCTCCTGGCCTGCTCATAACGTTGTTCGCGGATGGTGATGGCCTGCAGCAGCATCAGCCCATCGCTCTTGAGCAGGTGCGCGCATTGCTTG AAGT GGTTA TCGAGGAACTGATGGCCGACGGCTTCGATCATTTCGATGGAC ] [-] EMBL CD162451 [ TTTGACCGTATCNGCCAAGGTCACCCCGGGCGGG CCTGGANGGTGTTCCGGA TCTGGCGCAGCGAGATCAGCCTG ACATGGCGCGCCCAGCTG TTTTCAATGCCGCGG AACGCGAAGCCGTGGTGCGTGAACAACTGCGCCAGCTTTAGTTGATCCGGACCGGGGCGCGGCCAACCGCCATTCGGGAAACCTAACTATCGAAGCGCCCGAGCAGCGGCTGCGTTCGGGCTGTCGGCCTGGCCAGCAGCAGCTGCGCGGTGCCGATGCTGCGTTCGAGGAAACCGCCTTCGCAGTAGCACAGGTAGAACTCCCACAAACGCAGGAAATAATCGTCGTAGCCCGGTTCGCTCAGGCGCCCGTGGGCACGGCGGAAGTTCTCGTGCCACAGGCGCAGGGTGCGCGCGTAGTGCAGGCCGAAGTCCTCCATGTGCAGCAGGTTCATGTCGGTTTCGCGGCTGACCACCTCGAGCATCTTCTGCACGCTGGGCAGGGCGCCACCGG GGAAGATATAACGCTGGATAAAGTCGACCGTGCTCCTGGCCTGCTCATAACGTTGTTCGCGGATGGTGATGGCCTGCAGCAGCATCAGCCCATCGCTCTTGAGCAGGTGCGCGCATTGCTTG AAGT AGTTA TCGAGGAACTGATGGCCGACGGCTTCGATCATTTCGATGGAC ] [-] EMBL CD162428 [ TTTGACNGTATCCGCCAAGGTCANCCCGGCGGGGNCCTGNA GGTGTTCCGGA TCTGGCGCAGCGAGATCAGCCTGAACATGGCGCG CCAGCTG TTTTCAATGCCGCGG AACGCGAAGCCGTGGTGCGTGAACAACTGCGCCAGCTTTAGTTGATCCGGACCGGGGCGCGGCCAACCGCCATTCGGGAAACCTAACTATCGAAGCGCCCGAGCAGCGGCTGCGTTCGGGCTGTCGGCCTGGCCAGCAGCAGCTGCGCGGTGCCGATGCTGCGTTCGAGGAAACCGCCTTCGCAGTAGCACAGGTAGAACTCCCACAAACGCAGGAAATAATCGTCGTAGCCCAGTTCGCTCAGGCGCCCGTGGGCACGGCGGAAGTTCTCGTGCCACAGGCGCAGGGTGCGCGCGTAGTGCAGGCCGAAGTCCTCCATGTGCAGCAGGTTCATGTCGGTTTCGCGGCTGACCACCTCGAGCATCTTCTGCACGCTGGGCAGGGCGCCACCGG GGAAGATATAACGCTGGATAAAGTCGACCGTGCTCCTGGCCTGCTCATAACGTTGTTCGCGGATGGTGATGGCCTGCAGCAGCATCAGCCCATCGCTCTTGAGCAGGTGCGCGCATTGCTTG AAGT AGTTA TCGAGGAACTGATGGCCGACGGCTTCGATCATTTCGATGGAC ] [-] EMBL CD162436 [ TTTGACNGTATCCGCCAAGGTCAACCCGGGCGGGNCCTGNA GGTGTT CGGATTCTGGCGCAGCGAGATCAGCCTGAACATGGCGCG CCAGCTG TTTTCAATGCCGCGG AACGCGAAGCCGTGGTGCGTGAACAACTGCGCCAGCTTTAGTTGATCCGGACCGGGGCGCGGCCAACCGCCATTCGGGAAACCTAACTATCGAAGCGCCCGAGCAGCGGCTGCGTTCGGGCTGTCGGCCTGGCCAGCAGCAGCTGCGCGGTGCCGATGCTGCGTTCGAGGAAACCGCCTTCGCAGTAGCACAGGTAGAACTCCCACAAACGCAGGAAATAATCGTCGTAGCCCAGTTCGCTCAGGCGCCCGTGGGCACGGCGGAAGTTCTCGTGCCACAGGCGCAGGGTGCGCGCGTAGTGCAGGCCGAAGTCCTCCATGTGCAGCAGGTTCATGTCGGTTTCGCGGCTGACCACCTCGAGCATCTTCTGCACGCTGGGCAGGGCGCCACCGG GGAAGATATAACGCTGGATAAAGTCGACCGTGCTCCTGGCCTGCTCATAACGTTGTTCGCGGATGGTGATGGCCTGCAGCAGCATCAGCCCATCGCTCTTGGGCAGGTGCGCGCATTGCTTG AAGT AGTTA TCGAGGAACTGATGGCCGACGGCTTCGACCATTTCGATGGAC ] [+] EMBL CD162416 [ TGACCGTATCCGCCAAGGTCAACCCGGGCGGG CCTGGA GGTGTTCCGGA TCTGGCGCAGCGAGATCAGCCTGAACATGGCGCG CCAGCTGTTTTTCAATGCCGCGG AACGCGAAGCCGTGGTGCGTGAACAACTGCGCCAGCTTTAGTTGATCCGGACCGGGGCGCGGCCAACCGCCATTCGGGAAACCTAACTATCGAAGCGCCCGAGCAGCGGCTGCGTTCGGGCTGTCGGCCTGGCCAGCAGCAGCTGCGCGGTGCCGATGCTGCGTTCGAGGAAACCGCCTTCGCAGTAGCACAGGTAGAACTCCCACAAACGCAGGAAATAATCGTCGTAGCCCAGTTCGCTCAGGCGCCCGTGGGCACGGCGGAAGTTCTCGTGCCACAGGCGCAGGGTGCGCGCGTAGTGCAGGCCGAAGTCCTCCATGTGCAGCAGGTTCATGTCGGTTTCGCGGCTGACCACCTCGAGCATCTTCTGCACGCTGGGCAGGGCGCCACCGG GGAAGATATAACGCTGGATAAAGTCGACCGTGCTCCTGGCCTGCTCATAACGTTGTTCGCGGATGGTGATGGCCTGCAGCAGCATCAGCCCATCGCTCTTGAGCAGGTGCGCGCATTGCTTGAAAGT AG TA TCGAGGAACTGATGGCCGACGGCTTCGATCATTTCGATGGA ] [+] EMBL CD162425 [ TGACCGTATCCGCCAAGGTCAACCCGGGCGGG CCTGGA GGTGTTCCGGA TCTGGCGCAGCGAGATCAGCCTGAACATGGCGCG CCAGCTGTTTTTC ATGCC CGGACAACGCGAAGCCGTGGTGCGTGAACAACTGCGCCAGCTTTAGTTGATCCGGACCGGGGCGCGGCCAACCGCCATTCGGGAAACCTAACTATCGAAGCGCCCGAGCAGCGGCTGCGTTCGGGCTGTCGGCCTGGCCAGCAGCAGCTGCGCGGTGCCGATGCTGCGTTCGAGGAAACCGCCTTCGCAGTAGCACAGGTAGAACTCCCcac ] [+] EMBL CD162439 [ CCTGAACATGGCGCG CCAACTGTTGTTCAATGCCGCGG AACGCGAAGCCGTGGTGCGTGAACAACTGCGCCAGCTTTAGTTGATCCGGACCGGGGCGCGGCCAACCGCCATTCGGGAAACCTAACTATCGAAGCGCCCGAGCAGCGGCTGCGTTCGGGCTGTCGGCCTGGCCAGCAGCAGCTGCGCGGTGCCGATGCTGCGTTCGAGGAAACCGCCTTCGCAGTAGCACAGGTAGAACTCCCACAAACGCAGGAAATAATCGTCGTAGCCCAGTTCGCTCAGGCGCCCGTGGGCACGGCGGAAGTTCTCGTGCCACAGGCGCAGGGTGCGCGCGTAGTGCAGGCCGAAGTCCTCCATGTGCAGCAGGTTCATGTCGGTTTCGCGGCTGACCACCTCGAGCATCTTCTGCACGCTGGGCAGGGCGCCACCGG GGAAGATATAACGCTGGATAAAGTCGACCGTGCTCCTGGCCTGCTCATAACGTTGTTCGCGGATGGTGATGGCCTGCAGCAGCATCAGCCCATCGCTCTTGAGCAGGTGCGCGCATTGCTTG AAGT AGTTA TCGAGGAACTGATGGCCGACGGCTTCGATCATTTCGATGGA ] [+] EMBL CD162465 [ CGGGG AACGCNAAGCCGTGGTGCGTGAACAACTGCGCCAGCTTTAGTTGATCCGGACCGGGGCGCGGCCAACCGCCATTCGGGAAACCTAACTATCGAAGCGCCCGAGCAGCGGCTGCGTTCGGGCTGTCGGCCTGGCCAGCAGCAGCTGCGCGGTGCCGATGCTGCGTTCGAGGAAACCGCCTTCGCAGTAGCACAGGTAGAACTCCCACAAACGCAGGAAATAATCGTCGTAGCCCAGTTCGCTCAGGCGCCCGTGGGCACGGCGGAAGTTCTCGTGCCACANGCGCAGGGTGCGCGCGTAGTGCAGGCCGAAGTCCTCCATGTGCAGCAGGTTCATGTCGGTTTCGCGGCTGACCACCTCGAGCATCTTCTGCACGCTGGGCAGGGCGCCACCGGNGAAAGATAT ACGCTGGATAAAGTCGACCGTGCTCCTGGCCTGCTCATAACGTTGTTCGCGGATGGTGATGGCCTGCANCANCATCAGCCCATCGCTCTTGAGCA GTGCGCGCATTGCCTG AAGT AGTTA TCGAGGAACTGATGGCCGACGGCTTCAATCATTTCGATGa ] consensusID : consensus_10489#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 563 fasta sequence [GCGCCTTAATACAAGGTGCGTGAACAACTGCGCCAGCTTTAGTTGATCCGGACCGGGGCGCGGCCAACCGCCATTCGGGAAACCTAACTATCGAAGCGCCCGAGCAGCGGCTGCGTTCGGGCTGTCGGCCTGGCCAGCAGCAGCTGCGCGGTGCCGATGCTGCGTTCGAGGAAACCGCCTTCGCAGTAGCACAGGTAGAACTCCCACAAACGCAGGAAATAATCGTCGTAGCCCAGTTCGCTCAGGCGCCCGTGGGCACGGCGGAAGTTCTCGTGCCACAGGCGCATGGTGCGCGCGTAGTGCAGGCCGAAGTCCTCCATGTGCAGCAGGTTCATGTCGGTTTCGCAGCTGACCACCTCGAGCATCTTCTGCACGCTGGGCAGGGCGCCACCGGGGAAGATATAACGCTGGATAAAGTCGACCGTGCTCCTGGCCTGCTCATAACGTTGTTCGCGGATGGTGATGGCCTGCANCAGCATCAGCCCATCGCTCTTGAGCAGGTGCGCGCATTGCTTGAAGTATTATCGAGGAACTGATGGCNGACGGCTTCGATCATTTCGATG] [+] EMBL CD162411 [GCGCCTTAATACAAGGTGCGTGAACAACTGCGCCAGCTTTAGTTGATCCGGACCGGGGCGCGGCCAACCGCCATTCGGGAAACCTAACTATCGAAGCGCCCGAGCAGCGGCTGCGTTCGGGCTGTCGGCCTGGCCAGCAGCAGCTGCGCGGTGCCGATGCTGCGTTCGAGGAAACCGCCTTCGCAGTAGCACAGGTAGAACTCCCACAAACGCAGGAAATAATCGTCGTAGCCCAGTTCGCTCAGGCGCCCGTGGGCACGGCGGAAGTTCTCGTGCCACAGGCGCATGGTGCGCGCGTAGTGCAGGCCGAAGTCCTCCATGTGCAGCAGGTTCATGTCGGTTTCGCAGCTGACCACCTCGAGCATCTTCTGCACGCTGGGCAGGGCGCCACCGGGGAAGATATAACGCTGGATAAAGTCGACCGTGCTCCTGGCCTGCTCATAACGTTGTTCGCGGATGGTGATGGCCTGCANCAGCATCAGCCCATCGCTCTTGAGCAGGTGCGCGCATTGCTTGAAGTATTATCGAGGAACTGATGGCNGACGGCTTCGATCATTTCGATG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_10489#0 CTTTGACCGTATCCGCCAAGGTCAACCCGGGCGGGCCCTGGAGGTGTTCCGGATCTGGCG 60 consensus_10489#1 ------------------------------------------------------------ consensus_10489#0 CAGCGAGATCAGCCTGAACATGGCGCGCCAGCTGTTTTTCAATGCCGCGGAACGCGAAGC 120 consensus_10489#1 -------------------------------------------------GCGCCTTAATA 11 * * ** consensus_10489#0 CGTGGTGCGTGAACAACTGCGCCAGCTTTAGTTGATCCGGACCGGGGCGCGGCCAACCGC 180 consensus_10489#1 CAAGGTGCGTGAACAACTGCGCCAGCTTTAGTTGATCCGGACCGGGGCGCGGCCAACCGC 71 * ********************************************************* consensus_10489#0 CATTCGGGAAACCTAACTATCGAAGCGCCCGAGCAGCGGCTGCGTTCGGGCTGTCGGCCT 240 consensus_10489#1 CATTCGGGAAACCTAACTATCGAAGCGCCCGAGCAGCGGCTGCGTTCGGGCTGTCGGCCT 131 ************************************************************ consensus_10489#0 GGCCAGCAGCAGCTGCGCGGTGCCGATGCTGCGTTCGAGGAAACCGCCTTCGCAGTAGCA 300 consensus_10489#1 GGCCAGCAGCAGCTGCGCGGTGCCGATGCTGCGTTCGAGGAAACCGCCTTCGCAGTAGCA 191 ************************************************************ consensus_10489#0 CAGGTAGAACTCCCACAAACGCAGGAAATAATCGTCGTAGCCCAGTTCGCTCAGGCGCCC 360 consensus_10489#1 CAGGTAGAACTCCCACAAACGCAGGAAATAATCGTCGTAGCCCAGTTCGCTCAGGCGCCC 251 ************************************************************ consensus_10489#0 GTGGGCACGGCGGAAGTTCTCGTGCCACAGGCGCAGGGTGCGCGCGTAGTGCAGGCCGAA 420 consensus_10489#1 GTGGGCACGGCGGAAGTTCTCGTGCCACAGGCGCATGGTGCGCGCGTAGTGCAGGCCGAA 311 *********************************** ************************ consensus_10489#0 GTCCTCCATGTGCAGCAGGTTCATGTCGGTTTCGCGGCTGACCACCTCGAGCATCTTCTG 480 consensus_10489#1 GTCCTCCATGTGCAGCAGGTTCATGTCGGTTTCGCAGCTGACCACCTCGAGCATCTTCTG 371 *********************************** ************************ consensus_10489#0 CACGCTGGGCAGGGCGCCACCGGGGAAGATATAACGCTGGATAAAGTCGACCGTGCTCCT 540 consensus_10489#1 CACGCTGGGCAGGGCGCCACCGGGGAAGATATAACGCTGGATAAAGTCGACCGTGCTCCT 431 ************************************************************ consensus_10489#0 GGCCTGCTCATAACGTTGTTCGCGGATGGTGATGGCCTGCAGCAGCATCAGCCCATCGCT 600 consensus_10489#1 GGCCTGCTCATAACGTTGTTCGCGGATGGTGATGGCCTGCANCAGCATCAGCCCATCGCT 491 ***************************************** ****************** consensus_10489#0 CTTGAGCAGGTGCGCGCATTGCTTGAAGTAGTTATCGAGGAACTGATGGCCGACGGCTTC 660 consensus_10489#1 CTTGAGCAGGTGCGCGCATTGCTTGAAGTA-TTATCGAGGAACTGATGGCNGACGGCTTC 550 ****************************** ******************* ********* consensus_10489#0 GATCATTTCGATGGACACCA 680 consensus_10489#1 GATCATTTCGATG------- 563 ************* |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||