These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10527#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 17 consensus length = 426 fasta sequence [TTAGCAATGGCTGCGCGTC-GTCAAACACTA-GATGAAATTGTAGATTA-TTTA-AAAAAGAAAAAAGTATTTCTTAACTCAACAATTATTCAAACAAATGAATGTC-CAATAGATAATA-TT-CAAATAGTT-T-CTGACACTATACCTTCAAGAGATCATGGTTCATCGTCATCATCATCACCGTCATTTTGTTCACCTAT-TATTAAACATGA-TGATAAAAAGAAAAAAGCTAAACAAATTGTAAAAAGTCAAGAATCACCATCACATATTGAAATGTCTGTACTTCTACCTCATCCTAATGGTCC-TATACA-TACCATAGATCAAGGTCTAGTCAATTCAGATTGTATAAAACACGATGATCCTAGTCGAGAGTTTGCTGCAAATCAGTTAACCCAATTTCGGGTTCTACTGGTGAGAAATATACTTTCCATT] [+] EMBL CD197864 [TTAGCAATGGCTGCGCGTC GTCAAACACTA GATGAAATTGTAGATTA TTTA AAAGAGAAAAAAGTATTTCTTAATTCAACAATTATTCAAACAAATGAATGTC CAATAGATAATA TT CAAATAGTT T CTGACACTATACCTTCAAGAGATCATGGTTCATCGTCATCATCATCACCGTCATTTTGTTCACCTATATATT AACATGA TGATAAAAAGAAAAAAGCTAAACAAATTGTAAAAAGTCAAGAATCACCATCACATATTGAAATGTCTGTACTTCTACCTCATCCTAATGGTCC TATACA TACCATAGATCAAGGTCTAGTCAATTCAGATTGTATAAAACACGATGATCCTAGTCGAGAGTTTGCTGCAAATCAGTTAACCCAATTTCGGGTTCTACTGGTGAGAAATATACTTTCCATT] [+] EMBL CD197727 [TTAGCAATGGCTGCGCGTC GTCAAACACTA GATGAAATTGTAGATTA TTTA AAAGAGAAAAAAGTATTTCTTAATTCAACAATTATTCAAACAAATGAATGTC CAATAGATAATA TT CAAATAGTT T CTGACACTATACCTTCAAGAGATCATGGTTCATCGTCATCATCATCACCGTCATTTTGTTCACCTAT TATTAAACATGA TGATAAAAAGAAAAAAGCTAAACAAATTGTAAAAAGTCAAGAATCACCATCACATATTGAAATGTCTATACTTCTACCTCATCCTAATGGTCC TATACA TACCATAGATCAAGGTCTAGTCAATTCAGATTGT ] [+] EMBL CD197739 [TTAGCAATGGCTGCGCGTC GTCAAACACTA GATGAAATTGTAGATTA TTTA AAAAAGAAAAAAGTATTTCTTAATTCAACAATTATTCAAACAAATGAATGTC CAATAGATAATA TT CAAATAGTT T CTGACACTATACCTTCAAGAGATCATGGTTCATCGTCATCATCATCACCGTCATTTTGTTCACCTAT TATTAAACATGA TGATAAAAAGAAAAAAGCTAAACAAATTGTAAAAAGTCAAGAATCACCATCACATATTGAAATGTCTGTACTTCTACCTCATCCTAATGGTCC TATACA TACCATAGATCAAGGTCTAGTCAATTCAGATTGT ] [+] EMBL CD197578 [TTAGCAATGGCTGCGCGTC GTCAAACACTA GATGAAATTGTAGATTA TTTA AAAGAGAAAAAAGTATTTCTTAATTCAACAATTATTCAAACAAATGAATGTC CAATAGATAATA TT CAAATAGTT T CTGACACTATACCTTCAAGAGATCATGGTTCATCGTCATCATCATCACCGTCATTTTGTTCACCTAT TATTAAACATGA TGATAAAAAGAAAAAAGCTAAACAAATTGTAAAAAGTCAAGAATCACCATCACATATTGAAATGTCTGTACTTCTACCTCATCCTAATGGTCC TATACA TACCATAGATCAAGGTCTAGTCAATTCAGATTGT ] [+] EMBL CD197618 [TTAGCAATGGCTGCGCGTCTGTCAAACACTATGATGAAATTGTAGATTA TTTA AAAAAGAAAAAAGTATTTCTTAACTCAACAATTATTCAAACAAATGAATGTC CAATAGATAATA TT CAAATAGTT T CTGACACTATACCTTCAAGAGATCATGGTTCATCGTCATCATCATCACCGTCATTTTGTTCACCTAT TATTAAACATGA TGATAAAAAGAAAAAAGCTAAACAAATTGTAAAAAGTCAAGAATCACCATCACATATTGAAATGTCTGTACTTCTACCTCATCCTAATGGTCC TATACA TACCATAGATCAAGGTCTAGTCAATTCAGATTGT ] [-] EMBL CD197557 [ TAGCAATGGCTGCGCGTC GTCAAACACTA GATGAAATTGTAGATTA TTTA AAAAAGAAAAAAGTATTTCTTAACTCAACAATTATTCAAACAAATGAATGTC CAATAGATAATA TT CAAATAGTT T CTGACACTATACCTTCAAGAGATCATGGTTCATCGTCATCATCATCACCGTCATTTTGTTCACCTAT TATTAAACATGA TGATAAAAAGAAAAAAGCTAAACAAATTGTAAAAAGTCAAGAATCACCATCACATATTGAAATGTCTGTACTTCTACCTCATCCTAATGGTCC TATACA TACCATAGATCAAGGTCTAGTCAATTCAGATTGTATAAAATACGATGATCCcatat ] [-] EMBL CD197854 [ TAGCAATGGCTGCGCGTC GTCAAACACTA GATGAAATTGTAGATTA TTTA AAAAAGAAAAAAGTATTTCTTAATTCAACGATTATTCAAACAAATGAATGTC CAATAGATAATA TT CAAATAGTT T CTGACACTATACCTTCAAGAGATCATGGTTCATCGTCATCATCATCGCCGTCATTTTGTTCACCTAT TATTAAACATGA TGATAAAAAGAAAAAAGCTAAACAAATTGTAAAAAGTCAAGAATCACCATCACATATTGAAATGTCTGTACTTCTAC ] [-] EMBL CD197611 [ TAGCAATGGCTGCGCGTC GTCAAACACTA GATGAAATTGTAGATTA TATA AAAGAGAAAAAAGTATTTCTTAATTCAACAATTATTCAAACAAATGAATGTC CAATAGATAATA TT CAAATAGTT T CTGACACTATACCTTCAAGAGATCATGGTTCATCGTCATCATCATCACCGTCATTTTGTTCACCTAT TATTAAACATGA TGATAAAAAGGAAAAAGCTAAACAAATTGTATAAAGTCAAGAATCACCATCACATATTGAAATGTCTGTACTTCTACCTCATCCTAATGGTCCATATACATTACCATAGATCAAGGTCTAGTCAATTCAGATTGTATA ] [-] EMBL CD197494 [ TAGCAATGGCTGCGCGTC GTCAAACACTA GATGAAATTGTAGATTA TTTA AAAAAGAAAAAAGTATTTCTTAACTCAACAATTATTCAAACAAATGAATGTC CAATAGATAATA TT CAAATAGTT T CTGACACTATACCTTCAAGAGATCATGGTTCATCGTCATCATCATCACCGTCATTTTGTTCACCTAT TATTAAACATGA TGATAAAAAGAAAAAAGCTAAACAAATTGTAAAAAGTCAAGAATCACCATCACATATTGAAATGTCTGTACTTCTACCTCATCCTAATGGTCC TATACA TACCATAGATCAAGGTCTAGTCAATTCAGATTGTA ] [-] EMBL CD197847 [ TAGCAATGGCTGCGCGTC GTCAAACACTA GATGAAATTGTAGATTA TTTA AAAAAGAAAAAAGTATTTCTTAACTCAACAATTATTCAAACAAATGAATGTC CAATAGATAATA TT CAAATAGTT T CTGACACTATACCTTCAAGAGATCATGGTTCATCGTCATCATCATCACCGTCATTTTGTTCACCTAT TATTAAACATGA TGATAAGAAGAAAAAAGCTAAACAAATTGTAAAAAGTCAAGAATCACCATCACATATTGAAATGTCTGTACTTCTACCTCATCCTAATGGTCC TATACA TACCATAGATCAAGGTCTAGTCAATTCAGATTGTA ] [-] EMBL CD197850 [ TAGCAATGGCTGCGCGTC GTCAAACACTA GATGAAATTGTAGATTA TTTA AAAGAGAAAAAAGTATTTCTTAATTCAACAATTATTCAAACAAATGAATGTC CAATAGATAATA TT CAAATAGTT T CTGACACTATACCTTCAAGAGATCATGGTTCATCGTCATCATCATCACCGTCATTTTGTTCACCTAT TATTAAACATGA TGATAAAAAGAAAAAAGCTAAACAAATTGTAAAAAGTCAAGAATCACCATCACATATTGAAATGTCTGTACTTCTACCTCATCCTAATGGTCC TATACA TACCATAGATCAAGGTCTAGTCAATTCAGATTGTA ] [-] EMBL CD197723 [ TAGCAATGGCTGCGCGTC GTCAAACACTA GATGAAATTGTAGATTA TTTA AAAAAGAAAAAAGTATTTCTTAACTCAACAATTATTCAAACAAATGAATGTC CAATAGATAATA TT CAAATAGTT T CTGACACTATACCTTCAAGAGATCATGGTTCATCGTCATCATCATCACCGTCATTTTGTTCACCTAT TATTAAACATGA TGATAAAAAGAAAAAAGCTAAACAAATTGTAAAAAGTCAAGAATCACCATCACATATTGAAATGTCTGTACTTCTACCTCATCCTAATGGTCC TATACA TACCATAGATCAAGGTCTAGTCAATTCAGATTGTA ] [-] EMBL CD197838 [ TAGCAATGGCTGCGCGTC GTCAAACACTA GATGAAATTGTAGATTA TTTA AAAAAGAAAAAAGTATTTCTTAACTCAACAATTATTCAAACAAATGAATGTC CAATAGATAATA TT CAAATAGTT T CTGACACTATACCTTCAAGAGATCATGGTTCATCGTCATCATCATCACCGTCATTTTGTTCACCTAT TATTAAACATGA TGATAAAAAGAAAAAAGCTAAACAAATTGTAAAAAGTCAAGAATCACCATCACATATTGAAATGTCTGTACTTCTACCTCATCCTAATGGTCC TATACA TACCATAGATCAAGGTCTAGTCAATTCAGATTGTA ] [-] EMBL CD197651 [ TAGCAATGGCTGCGCGTC GTCAAACACTA GATGAAATTGTAGATTA TTTA AAAAAGAAAAAAGTATTTCTTAACTCAACAATTATTCAAACAAATGAATGTC CAATAGATAATA TT CAAATAGTT T CTGACACTATACCTTCAAGAGATCATGGTTCATCGTCATCATCATCACCGTCATTTTGTTCACCTAT TATTAAACATGA TGATAAAAAGAAAAAAGCTAAACAAATTGTAAAAAGTCAAGAATCACCATCACATATTGAAATGTCTGTACTTCTAC ] [-] EMBL CD197644 [ gAGCAAGGGCTGCGCGTC GTCAAACACTA GATGAAATTGTAGATTAGTTTAGAAAGAGAAAAAAGTATTTCGTAAGTCAACAATGAGTCAAACGAATGAATGTCGCAATAGATAATAGTTGCAAATAGTTGTGCTGACACTATACCTTCAAGAGATCAGGGTTCATCGTCATCATCATCACCGTCATTTTGTTCACCTAT TATTAAACATGAGTGATAAAAAGAAAAAAGCTAAACAAATTGTAAAAAGTCAAGAATCACCATCACATATTGAAATGTCTATACTTCTACCTCATCCTAATGGTCC TATACA TACCATAGATCAAGGTCTAGTCAATTCAGATTGTA ] [-] EMBL CD197530 [ acGCAACGGCTGCGCGTC GTCAAACACTA GATGAAATAGTAGACTA TATA AAAAAGAAACAAGTACATCTTAACTCAACAATTATTCAAACGAATGAATGTC CAATAGATAATA TT CAAATAGTT T CTGACACTATACCTTCAAGAGATCATGGTTCATCGTAATCATCATCACCGTCATTTTGTTCACCTAT TATTAAACATGA TGATAAAAAGAAAAAAGCTAAACAAATTGTAAAAAGTCAAGAATCACCATCACATATTGAAATGTCTGTACTTACACCTCATCCTAATGGTCC TATACA TACCATAGATCAAGGTCTAGTCAATTCAGATTGTA ] [-] EMBL CD140945 [ CCGTCATGTGGTTCACATAT TATTAAACATGA TGATAAAAAGAAGAAAGCTAAACAAATTGTAAAAAGTCAAGAATCACCATCACATATTGAAAAGTCTGTACTTCTACCTCATCCTAATGGTCC TATACA TACCATAGATCAAGGTCTAGTCAATTCAGATTGTA ] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||