These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10600#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 15 consensus length = 2174 fasta sequence [CCCACAGGTTATGGTCTCGCCGGTTGAGATGTCAAATTCAGCAGTTGATTCTGTGCTCAAAGTATGGAAAGAGTATTTCGTCTTACTGGTGAGACACCCAGTTAGACATATACTAGTGGCGTGTAGTCTTGGATTAGTATCATGGAAAATAATAACTAGTATTCGTACATATCAGAATCAGAAACTGTTAAAATCAAAACAGATGCGTGTTACTGATAACATGGAGAAAATGAGAGAAGCTTTGACCAAATTAACTCAACCATCTGTGCCAATGACTATCTGTAGTGAGAATTTATCTTATCTTTGTGAACAAATCAAGAAGAAGAGAATGACCCCCGTGGATGTCCTACATGCATTTCAGTTCAGAGCACTACAGTTGCAGGATAACAATAATTCAGGCATTGCTCTGTTCATTTTAGAAGCAGAAGAATGCGCTGCTAACTTGATGAAATTCCCAATGAACATCGACAAAGACTCCGAATTATACGGAATCCCCATCAGCATAAAGGAAGGGATCGCGATACGTGGCTATGATGCCACTATGGGCATCATAAAGCGATGTAATCAGCCTATAGATGAGGACTGTGTGCTCATCAAGGTACTGAAAAGTGTTGGTGCAATCCCTTTTGTGACCACCGTGACAACTCAGTTATGTCGCACACTGGATGGCTTTCATGTTATTTATAATGATGCGGAAAATCCATTCAATAAGTCCAGGTTGCCGGGCGGGAGTTCCTCCGGTGAAGCTGTATTATTGGCACAGTGTGGTTCTCCTGTAGGTATCGGCACAG-ATATTGCTGGTAGTATCCGAATACCCTGTGCATTTTGCAATTTAGCTGGCTTGAAACCAACGTCTGGGAGACTTAGTCTATTACGTATTGTGTCGACCGCCAAGAAATCAGTATTATATATATCGCCTTGCCTAGGGCCTATGGCTAGAAAGGTGGACGATTTACCTTGTGTAATGCGTGCGTTGCTGTGCCCTACAATGTTTGATTTAGATCCGTATGTTATACCGATGAGCTTTGACCAAGTGTCTTATGAGGGGAAGAACAGAAGTCAGTTAGTAATCGGTTATTATAGTAACTTCGACGACCCAAATCTCATTCAGGTCTTGGACGTGAATCAGCGAGTTGTGGAGAAAGCAGCCAAAGCATTAGAAAGTGCTGGACATCGACTTGTAAAGTTCACAGTTCCTCATCCTTATAAAGCCTTTATACTTGGTTTGCATGCGTTGTTTGCAGATGGTGGTCAGGAACTCCGAAGTCATCTACAAGGGGAACCACTTAGCCCGCATATTAAACTCATCAATACTATTACTGTAATTCCAGACATTTTGAAACCCATTGTTGAATTCATTTCTAAACATTTTATTGGCAAACCGGTCTGTCCGTTAGGTGCATTCCAGAAACTTGCCAGTGGTCAAGCAGCAGTTAATTTAATTTCTGAAATTAAAGCTTACCGATACG-ATTTGCAAAAGCTTGGAATGAAGCAGG--CACTGGATGCATTAATATGTCCTGTATTTCCTTATCCCGCACCACCAAAAGATGCCCCGCAAATATATATATCTCCATCCATTATCTACACTTTTTTGTATAACATTCTAGACTATCCTGCTGGAGCTGTCCCAGCTGGCTTTGTCACTGAAGACGATGTTCGCAATTCATTAATAAAATCCGAATCACTATATTCTTCTGGTGATTTTTACATGTCCAAAGTATACAAACTATTAGATGGGGGAGAAAACCTACCACTGTCTATTCAGGTGGTTGGTAAACCGTATCATGAAGAGACCGTTCTTCGAGTTATGCGTGAAATAGAAAGTTGTTTCTCTTTACAAACTGAGT-CGTAATTTCAG-AGAATATTTCTACCTTTTCTTAT-CGTGTTTCCTCTGTATTTAATTTTATGTCGCCTTTGTTTCTCTACTAGCATTTTG-TTATG-TTTTGATATTAGCTTTTGTACTTAGTCCTTCTGTATTAAGATCGATGGTTAATGTTCTGTATTCCTCATTTTTATTGATAACTGACATTTATTTTTTTTGGTCTTTTAGTTTTCGTTACTGTGATAATTGTGTCTGTTGATTTTCATTGTAGATTTTAGCAGATGATTCCATCATCTTTAACCAAAAATACCGTACTTATTAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL CD192017 [CCCACAGGTTATGGTCTCGCCGGTTGAGATGTCAAATTCAGCAGTTGATTCTGTGCTCAAAGTATGGAAAGAGTATTTCGTCTTACTGGTGAGACACCCAGTTAGACATATACTAGTGGCGTGTAGTCTTGGATTAGTATCATGGAAAATAATAACTAGTATTCGTACATATCAGAATCAGAAACTGTTAAAATCAAAACAGATGCGTGTTACTGATAACATGGAGAAAATGAGAGAAGCTTTGACCATATTAACTCAACCATCTGTGCCAATGACTATCTGTAGTGAGAATTTATCTTATCTTTGTGAACAAATCAAGAAGAAGAGAAT ] [+] EMBL SMAMIDASE [ GTTATGGTCTCGCCGGTTGAGATGTCAAATTCAGCAGTTGATTCTGTGCTCAAAGTATGGAAAGAGTATTTCGTCTTACTGGTGAGACACCCAGTTAGACATATACTAGTGGCGTGTAGTCTTGGATTAGTATCATGGAAAATAATAACTAGTATTCGTACATATCAGAATCAGAAACTGTTAAAATCAAAACAGATGCGTGTTACTGATAACATGGAGAAAATGAGAGAAGCTTTGACCAAATTAACTCAACCATCTGTGCCAATGACTATCTGTAGTGAGAATTTATCTTATCTTTGTGAACAAATCAAGAAGAAGAGAATGACCCCCGTGGATGTCCTACATGCATTTCAGTTCAGAGCACTACAGTTGCAGGATAACAATAATTCAGGCATTGCTCTGTTCATTTTAGAAGCAGAAGAATGCGCTGCTAACTTGATGAAATTCCCAATGAACATCGACAAAGACTCCGAATTATACGGAATCCCCATCAGCATAAAGGAAGGGATCGCGATACGTGGCTATGATGCCACTATGGGCATCATAAAGCGATGTAATCAGCCTATAGATGAGGACTGTGTGCTCATCAAGGTACTGAAAAGTGTTGGTGCAATCCCTTTTGTGACCACCGTGACAACTCAGTTATGTCGCACACTGGATGGCTTTCATGTTATTTATAATGATGCGGAAAATCCATTCAATAAGTCCAGGTTGCCGGGCGGGAGTTCCTCCGGTGAAGCTGTATTATTGGCACAGTGTGGTTCTCCTGTAGGTATCGGCACAG ATATTGCTGGTAGTATCCGAATACCCTGTGCATTTTGCAATTTAGCTGGCTTGAAACCAACGTCTGGGAGACTTAGTCTATTACGTATTGTGTCGACCGCCAAGAAATCAGTATTATATATATCGCCTTGCCTAGGGCCTATGGCTAGAAAGGTGGACGATTTACCTTGTGTAATGCGTGCGTTGCTGTGCCCTACAATGTTTGATTTAGATCCGTATGTTATACCGATGAGCTTTGACCAAGTGTCTTATGAGGGGAAGAACAGAAGTCAGTTAGTAATCGGTTATTATAGTAACTTCGACGACCCAAATCTCATTCAGGTCTTGGACGTGAATCAGCGAGTTGTGGAGAAAGCAGCCAAAGCATTAGAAAGTGCTGGACATCGACTTGTAAAGTTCACAGTTCCTCATCCTTATAAAGCCTTTATACTTGGTTTGCATGCGTTGTTTGCAGATGGTGGTCAGGAACTCCGAAGTCATCTACAAGGGGAACCACTTAGCCCGCATATTAAACTCATCAATACTATTACTGTAATTCCAGACATTTTGAAACCCATTGTTGAATTCATTTCTAAACATTTTATTGGCAAACCGGTCTGTCCGTTAGGTGCATTCCAGAAACTTGCCAGTGGTCAAGCAGCAGTTAATTTAATTTCTGAAATTAAAGCTTACCGATACG ATTTGCAAAAGCTTGGAATGAAGCAGG CACTGGATGCATTAATATGTCCTGTATTTCCTTATCCCGCACCACCAAAAGATGCCCCGCAAATATATATATCTCCATCCATTATCTACACTTTTTTGTATAACATTCTAGACTATCCTGCTGGAGCTGTCCCAGCTGGCTTTGTCACTGAAGACGATGTTCGCAATTCATTAATAAAATCCGAATCACTATATTCTTCTGGTGATTTTTACATGTCCAAAGTATACAAACTATTAGATGGGGGAGAAAACCTACCACTGTCTATTCAGGTGGTTGGTAAACCGTATCATGAAGAGACCGTTCTTCGAGTTATGCGTGAAATAGAAAGTTGTTTCTCTTTACAAACTGAGTCCGTAATTTCAGAAGAATATTTCTACCTTTTCTTATCCGTGTTTCCTCTGTATTTAATTTTATGTCGCCTTTGTTTCTCTACTAGCATTTTGTTTATGTTTTTGAAATTAGCTTTTGTACTTAGTCCTTCTGTATTAAGATCGATGGTTAATGTTCTGTATTCCTCATTTTTATTGATAACTGACATTTATTTTTTTTGGTCTTTTAGTTTTCGTTCCTGTGATAATTGTGTCTGTTGATTTTCATTGTAGATTTTAGCAGATGATTCCATCATCTTTAACCCAAAATACCGTACTTATTAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAA] [-] EMBL CD132189 [ GTTGATTCTGTGCTCAAAGTATGGAAAGAGTATTTCGTCTTACTGGTGAGACACCCAGTTAGACATATACTAGTGGCGTGTAGTCTTGGATTAGTATCATGGAAAATAATAACTAGTATTCGTACATATCAGAATCAGAAACTGTTAAAATCAAAACAGATGCGTGTTACTGATAACATGGAGAAAATGAGAGAAGCTTTGACCAAATTAACTCAACCATCTGTGCCAATGACTATCTGTAGTGAGAATTTATCTTATCTTTGTGAACAAATCAAGAAGAAGAGAATGACCCCCGTGGATGTCCTACATGC ] [+] EMBL BF936133 [ TTTGACCAAATTAACTCAACCATCTGTGCCAATGACTATCTGTAGTGAGAATTTATCTTATCTTTGTGAACAAATCAAGAAGAAAAGAATGAACCC ] [+] EMBL CD067308 [ TGACCCCCGTGGATGTCCTACATGCATTTCAGTTCAGAGCACTACAGTTGCAGGATAACAATAATTCAGGCATTGCTCTGTTCATTTTAGAAGCAGAAGAATGCGCTGCTAACTTGATGAAATTCCCAATGAACATCGACAAAGACTCCGAATTATACGGAATCCCCATCAGCATAAAGGAAGGGATCGCGATACGTGGCTATGATGCCACTATGGGCATCATAAAGCGATGTAATCAGCCTATAGATGAGGACTGTGTGCTCATCAAGGTACTGAAAAGTGTTGGTGCAATCCCTTTTG ] [+] EMBL CD113607 [ AGGGATCGCGATACGTGGCTATGATGCCACTATGGGCATCATAAAGCGATGTAGTCAGCCTATACATGAGGACTGTGTGCTCATCAAGGTACTGAAAAGTGTTGGTGCAATCCCTTTTGTGACCACCGTGACAACTCAGTTATGTCGCACACTGGATGGCTTTCATGTTATTTATAATGATGCGGAAAATCCATTCAATAAGTCCAGGTTGCCGGGCGGGAGTTCTTAGGGTGAAGCTGTATTATTGGCACAGTGTGGCTATCCTGTAGGTTTCGGCACAGCATATTGCTGGGAGTA ] [-] EMBL CD188084 [ TCAGTATTATATATATCGCCTTGCCTAGGGCCTATGGCTAGAAAGGTGGACGATTTAGCTTGTGTAATGCGTGCGTTGCTGTGCCCTACAATGTTTGATTTAGATCCGTATGTTATACCGATGAGCTTTGACCAAGTGTCTTATGAGGGGAAGAACAGAAGTCAGTTAGTAATCGGTTATTATAGTAACTTCGACGACCCAAATCTCATTCAGGTCTTGGACGTGAATCAGCGAGTTGTGGAGAAAGCAGCCAAAGCATTAGAAAGTGCTGGACATCGACTTGTAAAGTTCACAGTTCCTCATCCTTATAAAGCCTTTATACTTGGTTTGCATGCGTTGTTTG ] [+] EMBL CD167982 [ TAATCGGTTATTATAGTAACTTCGATGACCCAAATCTCATTCAGGTCTTGGACGTGAATCAGCGAGTTGTGGAGAAAGCAGCCAAAGCATTAGAAAGTGCTGGACATCGACTTGTAAAGTTCACAGTTCCTCATCCTTACAAAGCCTTTATACTTGGTTTGCGTGCGTTGTTTGCAGATGGTGGTCAGGAACTCCGAAGTCATCTACAAGGGGAACCACTTAGCCCGCATATTAAACTCATCAATACTATTACTGTAATCCCAGACATTTTGAAACCCATTGTCGAATTCATTTCTAAACATTTTATTGGCAAACCGGTCTGTCCGTTAGGTGCATTCCAGAAACTTGCCAGTGGTCAAGCAGCAGTTAATTTAATTTCTGAAATTAAAGCTTACCGATACGAATTTGCAAAAGCTTGGAATGAAGCAGGGCCACTGGATGCATTAATATGTCCTGTATTTCCTTATCCCGCAC ] [+] EMBL CD111638 [ ATCTCATTCAGGTCTTGGACGTGAATCAGCGAGTTGTGGAGAAAGCAGCCAAAGCATTAGAAAGTGCTGGACATCGACTTGTAAAGTTCACAGTTCCTCATCCTTACAAAGCCTTTATACTTGGTTTGCATGCGTTGTTTGCAGATGGTGGTCAGGAACTCCGAAGTCATCTACACGGNGAACCACTT ] [+] EMBL CD111648 [ ATCTCATTCAGGTCTTGGACGTGAATCAGCGAGTTGTGGAGAAAGCAGCCAAAGCATTAGAAAGTGCTGGACATCGACTTGTAAAGTTCACAGTTCCTCATCCTTACAAAGCCTTTATACTTGGTTTGCATGCGTTGTTTGCAGATGGTGGTCAGGAACTCCGAAGTCATCTACACGGNGAACCACTTAGCCCGCATATTAAACCCATCAATACTATTACTGNTATTCCAGACATTTTGAAACCCATcg ] [-] EMBL CD132494 [ TCATTCAGGTCTTGGACGTGAATCAGCGAGTTGTGGAGAAAGCAGCCAAAGCATTAGAAAGTGCTGGACATCGACTTGTAAAGTTCACAGTTCCTCATCCTTATAAAGCCTTTATACTTGGTTTGCATGCGTTGTTTG ] [+] EMBL CD072828 [ TTGTAAAGTTCACAGCTCCTCATCCTTATAAAGCCTTTATACTTGGATTGCATGCGTTGCTTGCAGATGGTGGTCAGGAACTCCGAAGTCATCTACAAGGGGAACCACTTAGCCCGCATATTAAACTCATCAATACTATTACTGTAATTCCAGACATTTTGAAACCCATTGTTGAATTCATTTCTAAACATTTTATTGGCAAACCGGTCTGTCCGTTAGGTGCATTCCAGAAACTTGCCAGTGGTCAAGCAGCAGTTAATTTAATTTCTGANATTAAAGCTTACCGATACGAATTTGCAAAAGCTTGGAATGAAGCAGGGCCACTGGATGCATTAATATGTCCTGTATTTtcccagc ] [+] EMBL AI882637 [ ggc CACTGGATGCATTAATATGTCCTGTATTTCCTTATCCCGCACCACCAAAAGATGCCCCGCAAATATATATATCTCTATCCATTATCTACACTTTTTTGTATAACATTCTAGACTATCCTGCTGGAGCTGTCCCAGCTGGCTTTGTCACTGAAGACGATGTTCGCAATTCATTAATAAAATCCGAATCACTATATTCTTCTGGTGATTTTTACATGTCCAAAGTATACAAACTATTAGATGGGGGAGAAAACCTACCACTGTCTATTCAGGTGGTTGGTAAA CGTATCATGAAGAGACCGTTCTTCGAGTTATGCGTGAAATAGAAAGTTGTTTC CTTTACAAACTGAGT CGTAATTTCAG AGAATATTTCTACCTTTTCTTAT CGTGTTTCCTCGGTA TTAATTTTATGTCGCCTTTGTTTCTCTACTAGCATTTTG TTATG TTTTGATA TAGCTTTTG ACTTAGTCCTCCTGTATT AGATCGAGGGTTAATG TCCGTATTCCTCATTTTTA TGA AACTGAC TTTA TTTTTGGGTC TTGAG TTGCGCTAC GGGA AAATGTCGCCG TGA TTTCATggag ] [-] EMBL CD076335 [ ATATATATCTCCATCCATTATCTACACTTTTTTGTATAACATTCTAGACTATCCTGCTGGAGCTGTCCCAGCTGGCTTTGTCACTGAAGACGATGTTCGCAATTCATTAATAAAATCCGAATCACTATATTCTTCTGGTGATTTTTACATGTCCAAAGTATACAAACTATTAGATGGGGGAGAAAACCTACCACTGTCTATTCAGGTGGTTGGTAAACCGTATCATGAAGAGACCGTTCTTCGAGTTATGCGTGAAATAGAAAGTTGTTTCTCTTTACAAACTGAGT CGTAATTTCAG AGAATATTTCTACCTTTTCTTAT CGTGTTTCCTCTGTATTTAATTTTATGTCGCCTTTGTTTCTCTACTAGCATTTTG TTATG TTTTGATATTAGCTTTTGTACTTAGTCCTTCTGTATTAAGATCGATGGTTAATGTTCTGTATTCTTCATTTTTATTGATAACTGACATTTATTTTTTTTGGTCTTTTAGTTTTCGTTACTGTGATAATTGTGTCTGTTGATTTTCATTGTAGATTTTAGCAGATGATTCCATCATCTTTAACCAAAAATACCGTA ] [-] EMBL BF936118 [ AAACCGTATCATGAAGAGACCGTTCTTCGAGTTATGCGTGAAATAGAAAGTTGTTTCTCTTTACAAATTGAGT GGTAATTTCAG AGAATATTTCTACCTTTTCTTAT GGTGTTTCCTCTGTATTTAATTTTATGTCGCCTTTGTTTCTCTACTAGCATTTTG TTATG TTTTGATATTAGCTTTTGTACTTAGTCCTTCTGTATTAAGATCGATGGTTAATGTTCTGTATTCTTCATTTTTATTGATAACTGACATTTA TTTTTTTGGTCTTTTAGTTTTCGAGACTGTGATAATTGTGTCTGTTGATTTTCATTGTAGATTTTAGCAGATGATTCCATCATCTTTAACCAAAAATACCGTg ] consensusID : consensus_10600#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 925 fasta sequence [CTCCGAGGCCAANAATTCGGCACGAGGCTTACAAAGCCTTTATACTTGGTTTGCATGCGTTGTTTGCAGATGGTGGTCAGGAACTCCGAAGTCATCTACAAGGGGAACCACTTAGCCCGCATATTAAACTCATCAATACTATTACTGTAATTCCAGACATTTTGAAACCCATTGTCGAATTCATTTCTAAACATTTTATTGGCAAACCGGTCTGTCCGTTAGGTGCATTCCAGAAACTTGCCAGTGGTCAAGCAGCAGTTAATTTAATTTCTGAAATTAAAGCTTACCGATACGAATTTGCAAAAGCTTGGAATGAAGCAGGGCCACTGGATGCATTAATATGTCCTGTATTTCCTTATCCCGCACCACCAAAAGATGCCCCGCAAATATATATATCTCCATCCATTATCTACACTTTTTTGTATAACATTCTAGACTATCCTGCTGGAGCTGTCCCAGCTGGCTTTGTCACTGAAGACGATGTTCGCAATTCATTAATAAAATCCGAATCACTATATTCTTCTGGTGATTTTTACATGTCCAAAGTATACAAACTATTAGATGGGGGAGAAAACCTACCACTGTCTATTCAGGTGGTTGGTAAACCGTATCATGAAGAGACCGTTCTTCGAGTTATGCGTGAATTGGAAAGTGGTTCCTCTTTACACCGGAGTCGTATTTCGGAGAATATTCTACCTTTCCTTAGCGTGTTCCCTCTGTATTAATTTTAGTGTCGCCTTGTGTCTCTCACTAGCATTGTGTTATGTTGCGATATGAGCTTGTGTACTAAGCCCTTCTGTATAAAGATCGATGGTTAATGTCTGTATTCTCATTTATAGTGATAGTGACTTTATTTTGTGCTCTATATTCGTCGTCACGAATATTGCGCGGAGTCTCTGGTAGTTGCAGCAGTGCTCATCATCTA] [+] EMBL CD082745 [CTCCGAGGCCAANAATTCGGCACGAGGCTTACAAAGCCTTTATACTTGGTTTGCATGCGTTGTTTGCAGATGGTGGTCAGGAACTCCGAAGTCATCTACAAGGGGAACCACTTAGCCCGCATATTAAACTCATCAATACTATTACTGTAATTCCAGACATTTTGAAACCCATTGTCGAATTCATTTCTAAACATTTTATTGGCAAACCGGTCTGTCCGTTAGGTGCATTCCAGAAACTTGCCAGTGGTCAAGCAGCAGTTAATTTAATTTCTGAAATTAAAGCTTACCGATACGAATTTGCAAAAGCTTGGAATGAAGCAGGGCCACTGGATGCATTAATATGTCCTGTATTTCCTTATCCCGCACCACCAAAAGATGCCCCGCAAATATATATATCTCCATCCATTATCTACACTTTTTTGTATAACATTCTAGACTATCCTGCTGGAGCTGTCCCAGCTGGCTTTGTCACTGAAGACGATGTTCGCAATTCATTAATAAAATCCGAATCACTATATTCTTCTGGTGATTTTTACATGTCCAAAGTATACAAACTATTAGATGGGGGAGAAAACCTACCACTGTCTATTCAGGTGGTTGGTAAACCGTATCATGAAGAGACCGTTCTTCGAGTTATGC ] [-] EMBL CD067413 [ GTTTGCATGCGTTGTTTGCAGATGGTGGTCAGGAACTCCGAAGTCATCTACAAGGGGAACCACTTAGCCCGCATATTAAACTCATCAATACTATTACTGTAATTCCAGACATTTTGAAACCCATTGTTGAATTCATTTCTAAACATTTTATTGGCAAACCGGTCTGTCCGTTAGGTGCATTCCAGAAACTTGCCAGTGGTCAAGCAGCAGTTAATTTAATTTCTGAAATTAAAGCTTACCGATACGAATTTGCAAAAGCTTGGAATGAAGCAGGGCCACTGGATGC ] [+] EMBL AW146480 [ TGGAGCTGTCCCAGCTGGCTTTGTCACTGAAGACGATGTTCGCAATTCATTAATAAAATCCGAATCACTATATTCTTCTGGTGATTTTTACATGTCCAAAGTATACAAACTATTAGAT GGGGAGAAAACCTACCACTGTCTATTCAGGTGGTTGGT AACCGTATCATGTAGAGACGGTCCTCGGAGTTATGCGTGAATTGGAAAGTGGTTCCTCTTTACACCGGAGTCGTATTTCGGAGAATATTCTACCTTTCCTTAGCGTGTTCCCTCTGTATTAATTTTAGTGTCGCCTTGTGTCTCTCACTAGCATTGTGTTATGTTGCGATATGAGCTTGTGTACTAAGCCCTTCTGTATAAAGATCGATGGTTAATGTCTGTATTCTCATTTATAGTGATAGTGACTTTATTTTGTGCTCTATATTCGTCGTCACGAATATTGCGCGGAGTCTCTGGTAGTTGCAGCAGTGCTCATCATCTA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_10600#0 CCCACAGGTTATGGTCTCGCCGGTTGAGATGTCAAATTCAGCAGTTGATTCTGTGCTCAA 60 consensus_10600#1 ------------------------------------------------------------ consensus_10600#0 AGTATGGAAAGAGTATTTCGTCTTACTGGTGAGACACCCAGTTAGACATATACTAGTGGC 120 consensus_10600#1 ------------------------------------------------------------ consensus_10600#0 GTGTAGTCTTGGATTAGTATCATGGAAAATAATAACTAGTATTCGTACATATCAGAATCA 180 consensus_10600#1 ------------------------------------------------------------ consensus_10600#0 GAAACTGTTAAAATCAAAACAGATGCGTGTTACTGATAACATGGAGAAAATGAGAGAAGC 240 consensus_10600#1 ------------------------------------------------------------ consensus_10600#0 TTTGACCAAATTAACTCAACCATCTGTGCCAATGACTATCTGTAGTGAGAATTTATCTTA 300 consensus_10600#1 ------------------------------------------------------------ consensus_10600#0 TCTTTGTGAACAAATCAAGAAGAAGAGAATGACCCCCGTGGATGTCCTACATGCATTTCA 360 consensus_10600#1 ------------------------------------------------------------ consensus_10600#0 GTTCAGAGCACTACAGTTGCAGGATAACAATAATTCAGGCATTGCTCTGTTCATTTTAGA 420 consensus_10600#1 ------------------------------------------------------------ consensus_10600#0 AGCAGAAGAATGCGCTGCTAACTTGATGAAATTCCCAATGAACATCGACAAAGACTCCGA 480 consensus_10600#1 ------------------------------------------------------------ consensus_10600#0 ATTATACGGAATCCCCATCAGCATAAAGGAAGGGATCGCGATACGTGGCTATGATGCCAC 540 consensus_10600#1 ------------------------------------------------------------ consensus_10600#0 TATGGGCATCATAAAGCGATGTAATCAGCCTATAGATGAGGACTGTGTGCTCATCAAGGT 600 consensus_10600#1 ------------------------------------------------------------ consensus_10600#0 ACTGAAAAGTGTTGGTGCAATCCCTTTTGTGACCACCGTGACAACTCAGTTATGTCGCAC 660 consensus_10600#1 ------------------------------------------------------------ consensus_10600#0 ACTGGATGGCTTTCATGTTATTTATAATGATGCGGAAAATCCATTCAATAAGTCCAGGTT 720 consensus_10600#1 ------------------------------------------------------------ consensus_10600#0 GCCGGGCGGGAGTTCCTCCGGTGAAGCTGTATTATTGGCACAGTGTGGTTCTCCTGTAGG 780 consensus_10600#1 ------------------------------------------------------------ consensus_10600#0 TATCGGCACAGATATTGCTGGTAGTATCCGAATACCCTGTGCATTTTGCAATTTAGCTGG 840 consensus_10600#1 ------------------------------------------------------------ consensus_10600#0 CTTGAAACCAACGTCTGGGAGACTTAGTCTATTACGTATTGTGTCGACCGCCAAGAAATC 900 consensus_10600#1 ------------------------------------------------------------ consensus_10600#0 AGTATTATATATATCGCCTTGCCTAGGGCCTATGGCTAGAAAGGTGGACGATTTACCTTG 960 consensus_10600#1 ------------------------------------------------------------ consensus_10600#0 TGTAATGCGTGCGTTGCTGTGCCCTACAATGTTTGATTTAGATCCGTATGTTATACCGAT 1020 consensus_10600#1 ------------------------------------------------------------ consensus_10600#0 GAGCTTTGACCAAGTGTCTTATGAGGGGAAGAACAGAAGTCAGTTAGTAATCGGTTATTA 1080 consensus_10600#1 ------------------------------------------------------------ consensus_10600#0 TAGTAACTTCGACGACCCAAATCTCATTCAGGTCTTGGACGTGAATCAGCGAGTTGTGGA 1140 consensus_10600#1 ------------------------------------------------------------ consensus_10600#0 GAAAGCAGCCAAAGCATTAGAAAGTGCTGGACATCGACTTGTAAAGTTCACAGTTCCTCA 1200 consensus_10600#1 --------------------------------------CTCCGAGGCCAANAATTCGGCA 22 * * * * * *** ** consensus_10600#0 TC---CTTATAAAGCCTTTATACTTGGTTTGCATGCGTTGTTTGCAGATGGTGGTCAGGA 1257 consensus_10600#1 CGAGGCTTACAAAGCCTTTATACTTGGTTTGCATGCGTTGTTTGCAGATGGTGGTCAGGA 82 **** ************************************************** consensus_10600#0 ACTCCGAAGTCATCTACAAGGGGAACCACTTAGCCCGCATATTAAACTCATCAATACTAT 1317 consensus_10600#1 ACTCCGAAGTCATCTACAAGGGGAACCACTTAGCCCGCATATTAAACTCATCAATACTAT 142 ************************************************************ consensus_10600#0 TACTGTAATTCCAGACATTTTGAAACCCATTGTTGAATTCATTTCTAAACATTTTATTGG 1377 consensus_10600#1 TACTGTAATTCCAGACATTTTGAAACCCATTGTCGAATTCATTTCTAAACATTTTATTGG 202 ********************************* ************************** consensus_10600#0 CAAACCGGTCTGTCCGTTAGGTGCATTCCAGAAACTTGCCAGTGGTCAAGCAGCAGTTAA 1437 consensus_10600#1 CAAACCGGTCTGTCCGTTAGGTGCATTCCAGAAACTTGCCAGTGGTCAAGCAGCAGTTAA 262 ************************************************************ consensus_10600#0 TTTAATTTCTGAAATTAAAGCTTACCGATACGA-TTTGCAAAAGCTTGGAATGAAGCAGG 1496 consensus_10600#1 TTTAATTTCTGAAATTAAAGCTTACCGATACGAATTTGCAAAAGCTTGGAATGAAGCAGG 322 ********************************* ************************** consensus_10600#0 --CACTGGATGCATTAATATGTCCTGTATTTCCTTATCCCGCACCACCAAAAGATGCCCC 1554 consensus_10600#1 GCCACTGGATGCATTAATATGTCCTGTATTTCCTTATCCCGCACCACCAAAAGATGCCCC 382 ********************************************************** consensus_10600#0 GCAAATATATATATCTCCATCCATTATCTACACTTTTTTGTATAACATTCTAGACTATCC 1614 consensus_10600#1 GCAAATATATATATCTCCATCCATTATCTACACTTTTTTGTATAACATTCTAGACTATCC 442 ************************************************************ consensus_10600#0 TGCTGGAGCTGTCCCAGCTGGCTTTGTCACTGAAGACGATGTTCGCAATTCATTAATAAA 1674 consensus_10600#1 TGCTGGAGCTGTCCCAGCTGGCTTTGTCACTGAAGACGATGTTCGCAATTCATTAATAAA 502 ************************************************************ consensus_10600#0 ATCCGAATCACTATATTCTTCTGGTGATTTTTACATGTCCAAAGTATACAAACTATTAGA 1734 consensus_10600#1 ATCCGAATCACTATATTCTTCTGGTGATTTTTACATGTCCAAAGTATACAAACTATTAGA 562 ************************************************************ consensus_10600#0 TGGGGGAGAAAACCTACCACTGTCTATTCAGGTGGTTGGTAAACCGTATCATGAAGAGAC 1794 consensus_10600#1 TGGGGGAGAAAACCTACCACTGTCTATTCAGGTGGTTGGTAAACCGTATCATGAAGAGAC 622 ************************************************************ consensus_10600#0 CGTTCTTCGAGTTATGCGTGAAATAGAAAGTTGTTTCTCTTTACAAACTGAGTCGTAATT 1854 consensus_10600#1 CGTTCTTCGAGTTATGCGTGAATTGGAAAGTGGTTCCTCTTTACAC-CGGAGTCGTA-TT 680 ********************** * ****** *** ********* * ******** ** consensus_10600#0 TCAGAGAATATTTCTACCTTTTCTTATCGTGTTTCCTCTGTATTTAATTTTATGTCGCCT 1914 consensus_10600#1 TCGGAGAATATT-CTACCTTTCCTTAGCGTGTTCCCTCTGTATTAATTTTAGTGTCGCCT 739 ** ********* ******** **** ****** ********** * *** ******** consensus_10600#0 T-TGTTTCTCTACTAGCATTTTGTTATGTTTTGATATTAGCTTTTGTACTTAGTCCTTCT 1973 consensus_10600#1 TGTGTCTCTC-ACTAGCATTGTGTTATGTTGCGATATGAGCTTGTGTACTAAGCCCTTCT 798 * *** **** ********* ********* ***** ***** ****** ** ****** consensus_10600#0 GTATTAAGATCGATGGTTAATGTTCTGTATTCCTCATTTTTATTGATAACTGACATTTAT 2033 consensus_10600#1 GTATAAAGATCGATGGTTAATGT-CTGTATTC-TCATTTATAGTGATAG-TGAC-TTTAT 854 **** ****************** ******** ****** ** ***** **** ***** consensus_10600#0 TTTTTTTGGTCTTTTAGTTTTCGTTACTGTGATAATTGTGTCTGTTGATTTTCATTGTAG 2093 consensus_10600#1 TTT-----GTGCTCTA-TATTCGTCGTCACGAATATTGC----GCGGAGTCTC-TGGTAG 903 *** ** * ** * ***** ** **** * ** * ** * **** consensus_10600#0 ATTTTAGCAGATGATTCCATCATCTTTAACCAAAAATACCGTACTTATTAATAAAAAAAA 2153 consensus_10600#1 -TTGCAGCAG-TGCT--CATCATCTA---------------------------------- 925 ** ***** ** * ******** consensus_10600#0 AAAAAAAAAAAAAAAAAAAAA 2174 consensus_10600#1 --------------------- |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||