These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10675#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 782 fasta sequence [TTTCTACTACATGCACACCGACGTAATTAAGCGCCCACTTTTAAAACGCTTCTGTATTCACCCCAACCGCCTCCTGTGTTCGCCTTCATTCCCACAACACAGCACACGAATAATGTAATGTACGTAAAATATAGTATAAGTTCCAAATTTTTATT-GAAAACAAAAAGCTTATTATTGTACAACGTTATGAGCAGTTGGCAGATGGTAGAGCATCAATGTTCCTGATGTAATTGCAATTGTCACGGACCAGACATTTCACGCATTGTTTCTTTCCATCAGGCCTTTTGGACTATGGAGAGTCAAACAATTCTTGTGAATTGGTTATATCCTTGAACACGAAAGACTCTACGTGTTCTTGGTTCCGTCGATGACCCTTCTGTACTTTGTCTCTCATTTCGTGAAAATAACTTTGTGTAGCCATGTCATATAGTTTCGTAAGGTCTTTCTTGTTGACAGATGACGACAGGAATCGATTAGTAAGTGCACTTCGTACGCAGCCATAAAACCGGCACTTCTGAATCGTTTGTTTTGATGAAGTACCAAGTTGCGTGAAATTAATGGCGACTTCAGGTTTCATGATGTAGGACAGAAGATATAGCATGGAGGTTTCAGGATCATCATCCATTAAACGCGTCAACATGGCCATAAATCTGTTCCTCACGTGCAGGCGAAAAAGCGACATTTATTTACGCTTTCGTCCGCTTTATTCCCCTTTTTTCGCCTTTATTTCCCCTTTATTGGTTGTTTAGGTCAATACCATAATAAGGGTGGTAAGTCATATG] [-] EMBL CD135102 [TTTCTACTACATGCACACCGACGTAATTAAGCGCCCACTTTTAAAACGCTTCTGTATTCACCCCAACCGCCTCCTGTGTTCGCCTTCATTCCCACAACACAGCACACGAATAATGTAATGTACGTAAAATATAGTATAAGTTCCAAATTTTTATT GAAAACAAAAAGCTTATTATTGTACAACGTTATGAGCAGTTGGCAGATGGTAGAGCATCAATGTT ] [-] EMBL CD077377 [ TTCATTCCCACAACACAGCACACGAATAATGTAATGTACGTAAAATATAGTATAAGTTCCAAATTTTTATT GAAAACAAAAAGCTTATTATTGTACAACGTTATGAGCAGTTGGCAGATGGTAGAGCATCAATGTTCCTGATGTAATTGCAATTGTCACGGACCAGACATTTCACGCATTGTTTCTTTCCATCAGGCCTTTTGGACTATGGAGAGTCAAACAATTCTTGTGAATTGGTTATATCCTTGAACACGAAAGACTCTACGTGTTCTTGGTTCCGTCGATGACCCTTCTGTACTTTGTCTCTCATTTCGTGAAAATAACTTTGTGTAGCCATGTCATATAGTTTCGTAAGGTCTTTCTTGTTGACAGATGACGACAGGAATCGATTAGTAAGTGCACTTCGTACGCAGCCATAAAACCGGCACTTCTGAATCGTTTGTTTTGATGAAGTACCAAGTTGCGTGAAATTAAT ] [+] EMBL CD077273 [ ATTTTTATTGGAAAACAAAAAGCTTATTATTGTACAACGTTATGAGCAGTTGGCAGATGGTAGAGCATCAATGTTCCTGATGTAATTGCAATTGTCACGGACCAGACATTTCACGCATTGTTTCTTTCCATCAGGCCTTTTGGACTATGGAGAGTCAAACAATTCTTGTGAATTGGTTATATCCTTGAACACGAAAGACTCTACGTGTTCTTGGTTCCGTCGATGACCCTTCTGTACTTTGTCTCTCATTTCGTGAAAATAACTTTGTGTAGCCATGTCATATAGTTTCGTAAGGTCTTTCTTGTTGACAGATGACGACAGGAATCGATTAGTAAGTGCACTTCGTACGCAGCCATAAAACCGGCACTTCTGAATCGTTTGTTTTGATGAAGTACCAAGTTGCGTGAAATTAATGGCGACTTCAGGTTTCATGATGTAGGACAGAAGATATAGCATGGAGGTTTCAGGATCATCATCCATTAAACGCGTCAACATGGCCATAAATCTGTTCCTCACGTGCAGGCGAAAAAGCGACATTTATTTACGCTTTCGTCCGCTTTATTCCCCTTTTTTCGCCTTTATTTCCCCTTTATTGGTTGTTTAGGTCAATACCATAATAAGGGTGGTAAGTCATATG] [+] EMBL CD059605 [ ttaTTCCGTCGATGACGCTTCTGTACTTTGTCTCTCATGTCGTGGAAATAACTTTGCGTAGCCATGTCATATAGTTTCGCAAGGTCTTTCTCGTTGACAGATGACGACAGGAATCGATTAGTAAGTGCACTTCGTACGCAGCCATAAAACCGGCACTTCTGAATCGCTCGTTTTGATGAAGCACCAAGTTGCGTACAATCAATGGCGACTTCAGGTTTCATGATGTAGAACAGAAGATATCGCATGGAGGTTTTAGGATCATCATCCAT ] consensusID : consensus_10675#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 598 fasta sequence [GAAATTGTATTCAAAATAATAATGGTATGTGAACAGTAATCACTGATTTGAATAACGTTCATATATTTATAGTATATACATAAGAAGCTTCTAGATTTTTCTCCAATAATATGCCCGGGCTGATCAGTTTAAAATTAGCCAATCGGCGCGCAGCAACACCTTTATGCATAAAACATGCTCTAATCCAATCTATGTCCCGCTAACACCAGAATTGATCGATACTAATTAGTGTTTGGTTGCCACATAACCTAACAAACAAAACTGGCTTTATAAATTGTCTACGTAACGACTACCAACGACGTTGAGTGGATAGAAAACACAACAGATACTGAGTGTATCAGAGTAAAGTAACCGTCGGTAGTTATTTAGTTTTAACAAATGAACTGACCTGGAATTAGAAAGTCAGCGACATAACTATTGACAGAGACATGCCGTTGATGATTTCTAAGACATGCACTTTACAATTCGGGAGACATAACTGGCAACCAAGTAACTGGGTTACTAAATTCCACCCTTTTTTACCCCTAAAGGGAACGGGTTTTTTACCCCTGAAAGAAACTTGCACTGGAGGGTTGATCAAAAATTTTTTTAATTGTTC] [+] EMBL CD073549 [GAAATTGTATTCAAAATAATAATGGTATGTGAACAGTAATCACTGATTTGAATAACGTTCATATATTTATAGTATATACATAAGAAGCTTCTAGATTTTTCTCCAATAATATGCCCGGGCTGATCAGTTTAAAATTAGCCAATCGGCGCGCAGCAACACCTTTATGCATAAAACATGCTCTAATCCAATCTATGTCCCGCTAACACCAGAATTGATCGATACTAATTAGTGTTTGGTTGCCACATAACCTAACAAACAAAACTGGCTTTATAAATTGTCTACGTAACGACTACCAACGACGTTGAGTGGATAGAAAACACAACAGATACTGAGTGTATCAGAGTAAAGTAACCGTCGGTAGTTATTTAGTTTTAACAAATGAACTGACCTGGAATTAGAAAGTCAGCGACATAACTATTGACAGAGACATGCCGTTGATGATTTCTAAGACATGCACTTTACAATTCGGGAGACATAACTGGCAACCAAGTAACTGGGTTACTAAATTCCACCCTTTTTTACCCCTAAAGGGAACGGGTTTTTTACCCCTGAAAGAAACTTGCACTGGAGGGTTGATCAAAAATTTTTTTAATTGTTC] consensusID : consensus_10675#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 591 fasta sequence [GCATTTGGCTTAATGGTTCGAAAAACTACTTTCTGAATCAAAGACTAGAACATGTAAATCGATATCAACTCCAAAAAAGGAATTGATGTATCAGTTATTAAAAATAAGGCTATCCATTTATTGCTTTACTGCTGCATAACAGAAAGGAAACTTGATTCTCATTTACTTGTAGAGATGACATGCTATCCTGTGGAGAATATAACGGTAAAATAATCTTATTGGTAAAACGCGAGATTATTAGCAAAGATGGATAGTGTCTAGCAGTGGAACCCAGGATGCGCGTTTCGTCCTATTTGGGACGCGTCAGCTGAATGTACGTGCATCTCAGAGTTCATGTTCACTCCGGGATTCAAACCAAGTACCATTCGCTTCAGACGCCATCACGTTATCCGTTTAGCTACAGAGTCCTGATAACCACTTTCTTGTGCAATAGGGTGAAGTTTAAATTCACTTGGTATTGTTTACTTGAATCTTCTCATTGATGTTTAAGACTGCAATTGGTCAGTCTCTTACTGGCATGTGTGCATACTGTGTGTATTGTCTCGATGTGCCAATAAGAGAATGATCAATCGCAGTCCTAAGCATCACTGA] [+] EMBL CD154158 [GCATTTGGCTTAATGGTTCGAAAAACTACTTTCTGAATCAAAGACTAGAACATGTAAATCGATATCAACTCCAAAAAAGGAATTGATGTATCAGTTATTAAAAATAAGGCTATCCATTTATTGCTTTACTGCTGCATAACAGAAAGGAAACTTGATTCTCATTTACTTGTAGAGATGACATGCTATCCTGTGGAGAATATAACGGTAAAATAATCTTATTGGTAAAACGCGAGATTATTAGCAAAGATGGATAGTGTCTAGCAGTGGAACCCAGGATGCGCGTTTCGTCCTATTTGGGACGCGTCAGCTGAATGTACGTGCATCTCAGAGTTCATGTTCACTCCGGGATTCAAACCAAGTACCATTCGCTTCAGACGCCATCACGTTATCCGTTTAGCTACAGAGTCCTGATAACCACTTTCTTGTGCAATAGGGTGAAGTTTAAATTCACTTGGTATTGTTTACTTGAATCTTCTCATTGATGTTTAAGACTGCAATTGGTCAGTCTCTTACTGGCATGTGTGCATACTGTGTGTATTGTCTCGATGTGCCAATAAGAGAATGATCAATCGCAGTCCTAAGCATCACTGA] consensusID : consensus_10675#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 490 fasta sequence [GCGGATATGGGTACGGCCTGCCACGAAAATTATACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAAAACCAATCAGTGGACATCGCAATGCTTTGTTTTAATTAGACAGTCGGATTCCCCTGGTCCGTGCCAGTTCTGAGTTAGCCGTCGCGCGCCAGACCATGAAAGTACAGCCGCTTGACGCAACGTGGAACATGTCCTCGCGCGTTGCTA-GCTGCACGACACTAACAGCTGAAACCGCCCACGATCGACCCGGGTCAGAGTCCAGTAACCTCACCACAACGCGCACCGAAGCACACAAAGCAGCAAAGAAACCAGCCCTGAACATGGATGGCGCTCGAGCGTTGGACCTATTCCGGACCGTTGCTGTAAGCTAGGCCTATGCTGTGTGAGCGCCACACCGGCGGAGCGAACGGGCGGGAG] [+] EMBL CD132614 [GCGGATATGGGTACGGCCTGCCACGAAAATTATACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAAAACCAATCAGTGGACATCGCAATGCTTTGTTTTAATTAGACAGTCGGATTCCCCTGGTCCGTGCCAGTTCTGAGTTAGCCGTCGCGCGCCAGACCATGAAAGTACAGCCGCTTGACGCAACGTGAAACATGTCCTCGCGCGTTGCTAGGCTGCACGACACTAACAGCTG ] [+] EMBL CD112837 [ TCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAAAACCAATCAGTGGACATCGCAATGCTTTGTTTTAATTAGACAGTCGGATTCCCCTGGTCCGTGCCAGTTCTGAGTTAGCCGTCGCGCGCCAGACCATGGAAGTACAGCCGCTTGACGCAACGTGGAACATGTCCTCGCGCGTTGCTA GCTGCACGACACTAACAGCTGAAACCGCCCACGATCGACCCGGGTCAGAGTCCAGTAACCTCACCACAACGCGCACCGAAGCACACAAAGCAGCAAAGAAACCAGCCCTGAACATGGATGGCGCTCGAGCGTTGGACCTATTCCGGACCGTTGCTGTAAGCTAGGCCTATGCTGTGTGAGCGCCACACCGGCGGAGCGAACGGGCGGGAG] [-] EMBL CD184277 [ GTTCTGAGTTAGCCGTCGCGCGCCAGACCATGTAAGTACAGCCGCTTGACGCAACGTGGAACATGTCCTCGCGCGTTGCTA GCTGCACGACACTAACAGCTGAAACCGCCCACGATCGACCCGGGTCAGAGTCCAGTAACCTCACCACAACGCGCGCGGAAGCACACAAAGCAGCAAAGAAACCAGCCCTGAAAATGGATGGCGCTCGAGCGTTGGACCTATACCGGACCGTTGCTGTAAGCTAG ] consensusID : consensus_10675#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 446 fasta sequence [AGTTACAAGAAATACGTTTTAAGATATATTGACGAGAAAAGAATGAACATTATCATAAATCATTAAGCAAAGATGGATAGTGGCTAGCAGTGGAATCCTGGACGCGCGTTTCGTCCTATTTGGGACTCGTCAGCTGGATGTACCTGTATCTCAGAGTTGATGTTCACTATGGGACTCGATCCCAGTACCTTTCGCTTCAATCGCCCTCTTTGCTTATAATGCTTGTGAGTTAAGGCTATATCGAGGCCATACGCACAGTATGCATATACGCCAATAAGAGACTGGCCAGTTACAGTCCTAAGCATCAACGGGAAGATTCAAACAAACAATACTAAGTGAACTATCATAAATCGCTAATTAAAAATAATGGTTATTAGTATTTCACTTAACTGAGAATTGAATAGTTTAATAATCTAACTANATTGATGTTAGATAATCCATTGGTT] [+] EMBL CD090512 [AGTTACAAGAAATACGTTTTAAGATATATTGACGAGAAAAGAATGAACATTATCATAAATCATTAAGCAAAGATGGATAGTGGCTAGCAGTGGAATCCTGGACGCGCGTTTCGTCCTATTTGGGACTCGTCAGCTGGATGTACCTGTATCTCAGAGTTGATGTTCACTATGGGACTCGATCCCAGTACCTTTCGCTTCAATCGCCCTCTTTGCTTATAATGCTTGTGAGTTAAGGCTATATCGAGGCCATACGCACAGTATGCATATACGCCAATAAGAGACTGGCCAGTTACAGTCCTAAGCATCAACGGGAAGATTCAAACAAACAATACTAAGTGAACTATCATAAATCGCTAATTAAAAATAATGGTTATTAGTATTTCACTTAACTGAGAATTGAATAGTTTAATAATCTAACTANATTGATGTTAGATAATCCATTGGTT] [+] EMBL CD090467 [ GAACATTATCATAAATCATTAAGCAAAGATGGATAGTGGCTAGCAGTGGAATCCTGGACGCGCGTTTCGTCCTATTTGGGACTCGTCAGCTGGATGTACCTGTATCTCACAGTTGATGTTCACTATGGGACTCGATCCCAATACCTTTCGCTTCAATCGCCCTCTTTGCTTATAATGCTTGTGAGTTAACGCTATATCGAGGCCATACGCACAGTATGCATATACCCCAATAAGAGACTGGCCAGTTACAGTCCTAAGCATCAACGGGAAGATTCAAACAAACAATACTAAGTGAACTATCATAAATCGCTAATTAAAAATAATGGTTATTAGTATTTCACTTAACTGAGAATTGAATAGTTTAATAATCTAACTAAATCGATGTTAGATAATCCATTGTTT] consensusID : consensus_10675#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 402 fasta sequence [ACCAGGCCTGTTGGACTATGGAGAGTCAAACAATTCTTGTGAATTGGTAATATCCTTGAACACGGAAGACTGTACGTGTTCTTTGTTCCGTCGATGACGCTTCTGGACTCTGTCTCTCATGTCGTGGAAATAACTTTGCGTAGCCATGTCATATAGTTTCGCAAGGTCTTTCTCGTTGATAGATGACGAAAGGAAACGATTAGTCAGTGCACTTCGTACGCAGTCGTAAAACCTGCACTTCTGAATCGCTCGTTTTGATGAAGTACCCAGTAACGTGAAATTAATGGCGACTTCAGGTTTCGTGATGTAGGACAGAATATATCGCATGGAGGTTTTAGGATCATCATCCATTAGACGTGTCAACATAGCCATAAATCTGTCCCTCACGTCTTTTTGCTCTAG] [-] EMBL CD128251 [ACCAGGCCTGTTGGACTATGGAGAGTCAAACAATTCTTGTGAATTGGTAATATCCTTGAACACGGAAGACTGTACGTGTTCTTTGTTCCGTCGATGACGCTTCTGGACTCTGTCTCTCATGTCGTGGAAATAACTTTGCGTAGCCATGTCATATAGTTTCGCAAGGTCTTTCTCGTTGATAGATGACGAAAGGAAACGATTAGTCAGTGCACTTCGTACGCAGTCGTAAAACCTGCACTTCTGAATCGCTCGTTTTGATGAAGTACCCAGTAACGTGAAATTAATGGCGACTTCAGGTTTCGTGATGTAGGACAGAATATATCGCATGGAGGTTTTAGGATCATCATCCATTAGACGTGTCAACATAGCCATAAATCTGTCCCTCACGTCTTTTTGCTCTAG] [+] EMBL CD128429 [ AGG CTGTTGGACTATGGAGAGTCAAACAATTCTTGTGAATTGGTAATATCCTTGAACACGGAAGACTGTACGTGTTCTTTGTTCCGTCGATGACGCTTCTGGACTCTGTCTCTCATGTCGTGGAAATAACTTTGCGTAGCCATGTCATATAGTTTCGCAAGGTCTTTCTCGTTGATAGATGACGAAAGGAAACGATTAGTCAGTGCACTTCGTACGCAGTCGTAAAACCTGCACTTCTGAATCGCTCGTTTTGATGAAGTACCCAGTAACGTGAAATTAATGGCGACTTCAGGTTTTGTGATGTAGGACAGAATATATCGCATGGAGGTTTTAGGATCATCATCCATTAGACGTGTCAACATAGCCATAAATCTGTCCCTCACGTCTTTTTGCTCTAG] [-] EMBL CD171523 [ CGTGGAAATAACTTTGCGTCGACATGTCATATGGTTTCGCAAGGTCTTTCTCGTTGACAGATGACGACAGGAATCGATTAGTCAGTGCACTTCGTACGCAGCCATAAAACCTGCACTTCTGAATCG ] consensusID : consensus_10675#6 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 375 fasta sequence [TCGATTTAGAGGATCCCATTGGAGTCTGAGGCGCTTGCAGAGACTGCAGCACAATCGGAACGGGAACGATTGGTTGAGCGTGTCGGTGAGATGGAGGCGGAATATGGTGAAGTTGGTGAAGGCGTATTTCGAAGGTGAGACGGACAGCCGACGTCGGCACGTCGAAGTGTTCGGTGAGACTAAAGCAAAAAAAATATCGTCAGATAGTCGTTCACGCAGTCCCCACTCTCCAGGAAGACCAATAAATAATGCAAGTACAACAAGTAGGCAACATGGGAAAGAACTTGAATCGCATGTAGATTCCTGCAGTCGTGGGCGTCATAATAATCACTCAGAAGAGTCTAGNCTTANAACAGTGGATGGTCATATCANGCG] [+] EMBL CD065133 [TCGATTTAGAGGATCCCATTGGAGTCTGAGGCGCTTGCAGAGACTGCAGCACAATCGGAACGGGAACGATTGGTTGAGCGTGTCGGTGAGATGGAGGCGGAATATGGTGAAGTTGGTGAAGGCGTATTTCGAAGGTGAGACGGACAGCCGACGTCGGCACGT ] [+] EMBL CD111880 [ TGGAGTCTGAGGCGCTTGCAGAGACTGCAGCGCAACCGGAACGGGAACGATTGGTTGAGCGTGTCGGTGAGATGGAGGCGGAATATGGTGAAGTTGGTGAAGGCGTATTT GAAGGTGAGACGGA AGCCGA GTCGGCA GTCGAAGTGTTCGGTGAGACTAAAGCAAAAAAAATATCGTCAGATAGTCGTTCACGCAGTCCCCACTCTCCAGGAAGACCAATAAATAATGCAAGTACAACAAGTAGGCAACATGGGAAAGAACTTGAATCGCATGTAGATTCCTGCAGTCGTGGGCGTCATAATAATCACTCAGAAGAGTCTAGNCTTANAACAGTGGATGGTCATATCANGCG] consensusID : consensus_10675#7 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 321 fasta sequence [AATGCAAGGTTTAGAAACTTTAAGTGTAAGATCAGTTGGTGAGCGCATTACCAAAGTTTGACTGAGAGGAGGAGAATAAGGATCAGGCAGTTTGGTTAGCATATCGCATAGAAAACTCTCAAAATCTTTGAAAAACGCATTGACCGCTGTTGTAATGATTGATAACTGATATTGATTACTTGAACCAAATGAGCTGGAAGACGGTGAAGGAATATCTGTAGGCTTGTTACTCTTTGGTTTTGACACTGTACGACAACGGTTAACAGTAACTTGGAATACATGCCCTCCAATAGGTTGTGGTGGGTTGCTAACAAGGTGACG] [+] EMBL CD197948 [AATGCAAGGTTTAGAAACTTTAAGTGTAAGATCAGTTGGTGAGCGCATTACCAAAGTTTGACTGAGAGGAGGAGAATAAGGATCAGGCAGTTTGGTTAGCATATCGCATAGAAAACTCTCAAAATCTTTGAAAAACGCATTGACCGCTGTTGTAATGATTGATAACTGATATTGATTACTTGAACCAAATGAGCTGGAAGACGGTGAAGGAATATCTGTAGGCTTGTTACTCTTTGGTTTTGACACTGTACGACAACGGTTAACAGTAACTTGGAATACATGCCCTCCAATAGGTTGTGGTGGGTTGCTAACAAGGTGACG] consensusID : consensus_10675#8 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 278 fasta sequence [AGTATAATGTGGANTCGTTACCAATATATCGAGGGCCTTTCTAAAAAGCTGGCTAAATGANAGTAGGAGCTGTGTCCCACGCTGTGTTGAAACGTGATCTGGTGCGGATGCATGACCGAAAGCTTTCAGCTAAACAAGTCCACTTAGAACAACGTGGTCCAGCATCCAATGTCCGAACACTTAATGAGCTATTGGATTTTGGGGGAATTATTTCACAGCTCACAGGTCACTCCCCCCCCTGAGTGGAGGTAGTGATCGCCCCTAAAGACGTGCACCAG] [+] EMBL AA999534 [AGTATAATGTGGANTCGTTACCAATATATCGAGGGCCTTTCTAAAAAGCTGGCTAAATGANAGTAGGAGCTGTGTCCCACGCTGTGTTGAAACGTGATCTGGTGCGGATGCATGACCGAAAGCTTTCAGCTAAACAAGTCCACTTAGAACAACGTGGTCCAGCATCCAATGTCCGAACACTTAATGAGCTATTGGATTTTGGGGGAATTATTTCACAGCTCACAGGTCACTCCCCCCCCTGAGTGGAGGTAGTGATCGCCCCTAAAGACGTGCACCAG] consensusID : consensus_10675#9 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 115 fasta sequence [TCACCATATTCCGCCTCCATCTCACCGACACGCTCAACCAATCGTTCCCGTTCCGGTTGTGCTGCAGTCTCTGCAAGCGCCTCAGACTCCAAGTGGGTACCGAAAGCTCGAATTC] [+] EMBL CD068479 [TCACCATATTCCGCCTCCATCTCACCGACACGCTCAACCAATCGTTCCCGTTCCGGTTGTGCTGCAGTCTCTGCAAGCGCCTCAGACTCCAAGTGGGTACCGAAAGCTCGAATTC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_10675#0 TTTCTACTACATGCACACCGACGTAATTAAGCGCCCACTTTTAAAACGCTTCTGTATTCA 60 consensus_10675#5 ------------------------------------------------------------ consensus_10675#8 ------------------------------------------------------------ consensus_10675#3 ------------------------------------------------------------ consensus_10675#9 ------------------------------------------------------------ consensus_10675#1 ------------------------------------------------------------ consensus_10675#4 ------------------------------------------------------------ consensus_10675#2 ------------------------------------------------------------ consensus_10675#7 ------------------------------------------------------------ consensus_10675#6 ------------------------------------------------------------ consensus_10675#0 CCCCAACCGCCTCCTGTGTTCGCCTTCATTCCCACAACACAGCACACGAATAATGTAATG 120 consensus_10675#5 ------------------------------------------------------------ consensus_10675#8 ------------------------------------------------------------ consensus_10675#3 ------------------------------------------------------------ consensus_10675#9 ------------------------------------------------------------ consensus_10675#1 ------------------------------------------------------------ consensus_10675#4 ------------------------------------------------------------ consensus_10675#2 ------------------------------------------------------------ consensus_10675#7 ------------------------------------------------------------ consensus_10675#6 ------------------------------------------------------------ consensus_10675#0 TACGTAAAATATAGTATAAGTTCCAAATTTTTATTGAAAACAAAAAGCTTATTATTGTAC 180 consensus_10675#5 ------------------------------------------------------------ consensus_10675#8 ------------------------------------------------------------ consensus_10675#3 ------------------------------------------------------------ consensus_10675#9 ------------------------------------------------------------ consensus_10675#1 ------------------------------------------------------------ consensus_10675#4 ------------------------------------------------------------ consensus_10675#2 ----------GCATTTGGCTTAATGGTTCGAAAAACTACTTTCTGAATCAAAGACTAGAA 50 consensus_10675#7 ------------------------------------------------------------ consensus_10675#6 ------------------------------------------------------------ consensus_10675#0 AACGTTATGAGCAGTTGGCAGATGGTAGAGCATCAATGTTCCTGATGTAATTGCAATTGT 240 consensus_10675#5 ------------------------------------------------------------ consensus_10675#8 ------------------------------------------------------------ consensus_10675#3 ------------------------------------------------------------ consensus_10675#9 ------------------------------------------------------------ consensus_10675#1 ----GAAATTGTATTCAAAATAATAATGGTATGTGAACAGTAATCACTGATTTGAATAAC 56 consensus_10675#4 ------------------------------------------------------------ consensus_10675#2 CATGTAAATCGATATCAACTCCAAAAAAGGAATTGATGTATCAGTTATTAAAAATAAGGC 110 consensus_10675#7 ------------------------------------------------------------ consensus_10675#6 ------------------------------------------------------------ consensus_10675#0 CACGGACCAGACATTTCACGCATTGTTTCTTTCCATCAGGCCTTTTGGACTATGGAGAGT 300 consensus_10675#5 ----------------------------------ACCAGGCCTGTTGGACTATGGAGAGT 26 consensus_10675#8 ------------------------------------------------------------ consensus_10675#3 -----------------------------------------------GCGGATATGGGTA 13 consensus_10675#9 ------------------------------------------------------------ consensus_10675#1 GTTCATATATTTATAGTATATACATAAGAAGCTTCTAGATTTTTCTCCAATAATATGCCC 116 consensus_10675#4 ------------------------------------------------------------ consensus_10675#2 TATCCATTTATTGCTTTACTGCTGCATAACAGAAAGGAAACTTGATTCTCATTTACTTGT 170 consensus_10675#7 ------------------------------------------------------------ consensus_10675#6 ---------------------------------------------TCGATTTAGAGGATC 15 consensus_10675#0 CAAACAATTCTTGTGAATTGGTTATATCCTTGAACACGAAAGACTCTA--CGTGTTCT-T 357 consensus_10675#5 CAAACAATTCTTGTGAATTGGTAATATCCTTGAACACGGAAGACTGTA--CGTGTTCT-T 83 consensus_10675#8 --------------------------------------------------AGTATAATGT 10 consensus_10675#3 CGGCCTGCCACGAAAATTATACCTTAAGAGAGTCATAGTTACTCCCGC--CGTTTACCCG 71 consensus_10675#9 ------------------------------------------------------------ consensus_10675#1 GGGCTGATCAGTTTAAAATTAGCCAATCGGCGCGCAGCAACACCTTTA--TGCATAAAAC 174 consensus_10675#4 ---AGTTACAAGAAATACGTTTTAAGATATATTGACGAGAAAAGAATG--AACATTATCA 55 consensus_10675#2 AGAGATGACATGCTATCCTGTGGAGAATATAACGGTAAAATAATCTTATTGGTAAAACGC 230 consensus_10675#7 ----------------------------------------------------------AA 2 consensus_10675#6 CCATTGGAGTCTGAGGCGCTTGCAGAGACTGCAGCACAATCGGAACGGGAACGATTGGTT 75 consensus_10675#0 GGTTCCGTCGATGACCCTTCTGTACTTTGTCTCTCATTTCGTGA--AAATAACTTTGTGT 415 consensus_10675#5 TGTTCCGTCGATGACGCTTCTGGACTCTGTCTCTCATGTCGTGG--AAATAACTTTGCGT 141 consensus_10675#8 GGANTCGTTACCAATATATCGAGGGCCTTTCTAAAAAGCTGGCT--AAATGANAGTA-GG 67 consensus_10675#3 CGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAG-AAATCACATTGCGT 130 consensus_10675#9 --------TCACCATATTCCGCCTCCATCTCACCGACACGCTCAACCAATCGTTCCCGTT 52 consensus_10675#1 ATGCTCTAATCCAATCTATGTCCCGCTAACACCAGAATTGATCG--ATACTAATTAGTGT 232 consensus_10675#4 TAAATCATTAAGCAAAGATGGATAGTGGCTAGCAGTGGAATCCTGGACGCGCGTTTCGTC 115 consensus_10675#2 GAGATTATT-AGCAAAGATGGATAGTGTCTAGCAGTGGAACCCAGGATGCGCGTTTCGTC 289 consensus_10675#7 TGCAAGGTTTAGAAACTTTAAGTGTAAGATC----AGTTGGTGAGCGCATTACCAAA-GT 57 consensus_10675#6 GAGCGTGTCGGTGAGATGGAGGCGGAATATGGTGAAGTTGGTGAAGGCGTATTTCGAAGG 135 consensus_10675#0 AGCCATGTCATATA--GTTTCGTA--AGGTC-TTTCTTGTTGACAGATGAC---GACAGG 467 consensus_10675#5 AGCCATGTCATATA--GTTTCGCA--AGGTC-TTTCTCGTTGATAGATGAC---GAAAGG 193 consensus_10675#8 AGCTGTGTCCCACGCTGTGTTGAA--ACGTGATCTGGTGCGGATGCATGACC--GAAAGC 123 consensus_10675#3 CAAAACCAATCAGTGGACATCGCA--ATGC--TTTGTTTTAATTAGACAGTC--GGATTC 184 consensus_10675#9 CCGGTTGTGCTGCAGTCTCTGCAA--GCGCCTCAGACTCCAAGTGGGTACC---GAAAGC 107 consensus_10675#1 TTGGTTGCCACATAACCTAACAAAC-AAAACTGGCTTTATAAATTGTCTACG--TAACGA 289 consensus_10675#4 CTATTTGGGACTCG-TCAGCTGGAT-GTACCTGTATCTCAGAGTTGATGTTCACTATGGG 173 consensus_10675#2 CTATTTGGGACGCG-TCAGCTGAAT-GTACGTGCATCTCAGAGTTCATGTTCACTCCGGG 347 consensus_10675#7 TTGACTGAGAGGAGGAGAATAAGGA-TCAGGCAGTTTGGTTAGCATATCGCATAGAAAAC 116 consensus_10675#6 TGAGACGGACAGCCGACGTCGGCACGTCGAAGTGTTCGGTGAGACTAAAGCA--AAAAAA 193 consensus_10675#0 AATCGATTAG---TAAGTGCACTTCGTACGCAGCC-ATAAAACCGGCACTTCTGAAT-CG 522 consensus_10675#5 AAACGATTAG---TCAGTGCACTTCGTACGCAGTC-GTAAAACCTGCACTTCTGAAT-CG 248 consensus_10675#8 TTTCAGCTAAA--CAAGTCCACTTAGAACAACGTG-GTCCAGCATCCAATGTCCGAA-CA 179 consensus_10675#3 CCCTGGTCCGTGCCAGTTCTGAGTTAGCCGTCGCGCGCCAGACCATGAAAGTACAGC-CG 243 consensus_10675#9 TCGAATTC---------------------------------------------------- 115 consensus_10675#1 CTACCAACGACGTTGAGTGGATAGAAAACACAACAGATACTGAGTGTATCAGAGTAA-AG 348 consensus_10675#4 ACTCGATCCCAGTACCTTTCGCTTCAATCGCCCTCTTTGCTTATAATGCTTGTGAGT-TA 232 consensus_10675#2 ATTCAAACCAAGTACCATTCGCTTCAGACGCCATC---ACGTTATCCGTTTAGCTAC-AG 403 consensus_10675#7 TCTCAAAATCTTTGAAAAACGCATTGACCGCTGTTGTAATGATTGATAACTGATATT-GA 175 consensus_10675#6 ATATCGTCAGATAGTCGTTCACGCAGTCCCCACTCTCCAGGAAGACCAATAAATAATGCA 253 consensus_10675#0 TTTGTTTTGATGAAGTACCAAGTTGCGTGAAATTAATGGCGACTTCAGGTTTCATGATGT 582 consensus_10675#5 CTCGTTTTGATGAAGTACCCAGTAACGTGAAATTAATGGCGACTTCAGGTTTCGTGATGT 308 consensus_10675#8 CT-----TAATGAGCTATTGGATTTTGGGGGAATTAT------TTCACAGCTCACAGGTC 228 consensus_10675#3 CTTGACGCAACGTGGAACATGTCCTCGCGCG--TTGCTAGCTGCACGACACTAACAGCTG 301 consensus_10675#9 ------------------------------------------------------------ consensus_10675#1 TAACCGTCGGT-AGTTATTTAGTTTTAACAAATGAACTG---ACCTGGAATTAGAAAGTC 404 consensus_10675#4 AG-GCTATATCGAGGCCATACGCACAGTATGCATATACGCCAATAAGAGACTGGCCAGTT 291 consensus_10675#2 AGTCCTGATAACCACTTTCTTGTGCAATAGGGTGAAGTTTAAATTC---ACTTGGTATTG 460 consensus_10675#7 TTACTTGAACCAAATGAGCTGGAAGACGGTGAAGGAATAT---CTGTAGGCTTGTTACTC 232 consensus_10675#6 AGTACAACAAGTAGGCAACATGGGAAAGAACTTGAATCGCATGTAGATTCCTGCAGTCGT 313 consensus_10675#0 AGGACAGAAGATATAGCATGGAGGTTT--CAGGATCATCAT-CCATTAAACG-CGTCA-A 637 consensus_10675#5 AGGACAGAATATATCGCATGGAGGTTT--TAGGATCATCAT-CCATTAGACG-TGTCA-A 363 consensus_10675#8 A---CTCCCCCCCCTGAGTGGAGGTAG--T--GATCGCCCC-TAAAGACGTG-CACCA-G 278 consensus_10675#3 AAACCGCCCACGATCGACCCGGGTCAGAGTCCAGTAACCTCACCACAACGCG-CACCG-A 359 consensus_10675#9 ------------------------------------------------------------ consensus_10675#1 AGCGACATAACTATTGACAGAGACATGCCGTTGATGATTTCTAAGACATGCA-CTTTACA 463 consensus_10675#4 ACAGTCCTAAGCATCAACGGGAAGATTCAAACAAACAATACTAAGTGAACTATCATAAAT 351 consensus_10675#2 TTTACTTGAATCTTCTCATTGATGTTTAAGACTGCAATTGGTCAGTCTCTTACTGGCATG 520 consensus_10675#7 TTTGGTTTTGACACTGTACGACAACGGTTAACAGTAACTTGGAATACATGCCCTCCAATA 292 consensus_10675#6 GGGCGTCATAATAATCACTCAGAAGAGTCTAGNCTTANAACAGTGGATGGTCATATCANG 373 consensus_10675#0 CATGGCCATAAATCTGTTCCTCACGTGCAGGCGAAAAAGCGACATTTATTTACGCTTTCG 697 consensus_10675#5 CATAGCCATAAATCTGTCCCTCACGTCTTTTTGCTCTAG--------------------- 402 consensus_10675#8 ------------------------------------------------------------ consensus_10675#3 AGCACACAAAGCAGCAAAGAAACCAGCCCTGAACATGGATGGCGCTCGAGCGTTGGACCT 419 consensus_10675#9 ------------------------------------------------------------ consensus_10675#1 ATTCGGGAGACATAACTGGCAACCAAGTAACTGGGTTACTAAATTCCACCCTTTTTTACC 523 consensus_10675#4 CGCTAATTAAAAATAATGGTTATTAGTATTTCACTTAACTGAGAATTGAATAGTTTAATA 411 consensus_10675#2 TGTGCATACTGTGTGTATTGTCTCGATGTGCCAATAAGAGAATGATCAATCGCAGTCCTA 580 consensus_10675#7 GGTTGTGGTGGGTTGCTAACAAGGTGACG------------------------------- 321 consensus_10675#6 CG---------------------------------------------------------- 375 consensus_10675#0 TCCGCTTTATTCCCCTTTTTTCGCCTTTATTTCCCCTTTATTGGTTGTTTAGGTCAATAC 757 consensus_10675#5 ------------------------------------------------------------ consensus_10675#8 ------------------------------------------------------------ consensus_10675#3 ATTCCGGACCGTTGCTGTAAGCTAGGCCTATGCTGTGTGAGCGCCACACCGGCGGAGCGA 479 consensus_10675#9 ------------------------------------------------------------ consensus_10675#1 CCTAAAGGGAACGGGTTTTTTACCCCTGAAAGAAACTTGCACTGGAGGGTTGATCAAAAA 583 consensus_10675#4 ATCTAACTANATTGATGTTAGATAATCCATTGGTT------------------------- 446 consensus_10675#2 AGCATCACTGA------------------------------------------------- 591 consensus_10675#7 ------------------------------------------------------------ consensus_10675#6 ------------------------------------------------------------ consensus_10675#0 CATAATAAGGGTGGTAAGTCATATG 782 consensus_10675#5 ------------------------- consensus_10675#8 ------------------------- consensus_10675#3 ACGGGCGGGAG-------------- 490 consensus_10675#9 ------------------------- consensus_10675#1 TTTTTTTAATTGTTC---------- 598 consensus_10675#4 ------------------------- consensus_10675#2 ------------------------- consensus_10675#7 ------------------------- consensus_10675#6 ------------------------- |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||