These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10702#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 14 consensus length = 1282 fasta sequence [GGTGGATACCCANCGTAGTTTGGATGATGGTGGCGACTTAACTCATCAGCTGCATAAAAATTACAAGGAATTACTGACTGGTATATGTGGAATAGTTGAGGAAAGTGTGACAGGTGTTCATCGTCTTTATCAGTACGTGAAATCTGGCACATTGGGAGTGCCAGCTATGAATGTTAGCGACAGTATAACCAAATCAAAATTTGATAATTTTTATTTGTGCAAAGAATCTATTGTTGATTCCCTTAAGCGAACTACAGATATGATGATCAGTGGTAAGACCGTATTAGTATGTGGTTATGGTGAAGTTGGGAAAGGTGTTTGCCAAGCGTTAAGAGGATTGGGAGCTTTCGTTTGTATTTCGGAAATAGATCCGATTTGTGCACTTCAAGCCTGCATGGATGGTTATCGTGTTGTAAAAATTGATGAAGTTATACGTTCAGTGGATATTGTGGTTACTTGCACTGGGAATAAAGGTGTCATTACTCGGGCTCATATGGATCAAATGAAAAGTGGTTGTGTTGTATGCAATATGGGTCACTCTAACACCGAAATCGATGTTCGATCTCTTCAAACACCTGATTTAACATGGGAGCGTGTTCGATCACAAGTGGATCATGTTATTTGGATGGATGGTAAACGTATTGTTCTTATAGCTGAGGGTCGTTTGGCGAATTTAAGTTGTTCAACTGTTCCATCTATTGTTGTCTCTGTTAGCGCCAGTACTCAAATATTAGCTTTGATTG-AATTATACAATGCTCCTGCTGGTCGTTATAAAAATGATGTGTATTTATTACCGAAAAAAATGGATGAATATGTGGCAACATTGCATCTTCCATTATTCAATGGTCGAATAACTGAACTCACTGATGAACAAGCTCGATATTTAGGTGTAAATAAAACAGGACCATTTAAACCGAGTAATTACAAATACTAAACTTGTTCTCATTCTTCGTTTCTGCTCATGCACTGATTGCTGTTACATTTATTGGGAAATGTCTTCCTGTTTAACATGTATACTTTGCATCGATTTGGTTTTCGTAAAAAGTATGGTAGAATATTACATCTAATTTACTTTAAATAAATATG-TTGAAGTATG-AATTTCTCATCCT-CTTACTCTGTTTATTCTC-ATAAATTTCAATTACATTCCAATAACTATTGTGTAAAAGAGTTGCTTTATATTAATCTAGTATATTTTCATGTTTCACCGTTAATTTAA-CATATGTCTTTCCTTATTAATCTTGGTTGGCAGGATTTACCGTTAAAAAAA-AAACAAATTTTTGAT] [-] EMBL CD142964 [GGTGGATACCCANCGTAGTTTGGATGATGGTGGCGACTTAACTCATCAGCTGCATAAAAATTACAAGGAATTACTGACTGGTATATGTGGAATAGTTGAGGAAAGTGTGACAGGTGTTCATCGTCTTTATCAGTACGTGAAATCTGGCACATTGGGAGTGCCAGCTATGAATGTTAGCGACAGTATAACCAAATCAAAATTTGATAATTTTTATTTGTGCAAAGAATCTATTGTTGATTCCCTTAAGCGAACTACAGATATGATGATCAGTGGTAAGACCGTATTAGTATGTGGTTATGGTGAAGTTGGGAAAGGTGTTTGCCAAGCGTTAAGAGGATTGGGAGCTTTCGTTTGTATTTCGGAAATAGATCCGATTTGTGCAC ] [-] EMBL CD142912 [ CATCAGCTGCATAAAAATTACAAGGAATTACTGACTGGTATATGTGGAATAGTTGAGGAAAGTGTGACAGGTGTTCATCGTCTTTATCAGTACGTGAAATCTGGCACATTGGGAGTGCCAGCTATGAATGTTAGCGACAGTATAACCAAATCAAAATTTGATAATTTTTATTTGTGCAAAGAATCTATTGTTGATTCCCTTAAGCGAACTACAGATATGATGATCAGTGGTAAGACCGTATTAGTATGTGGTTATGGTGAAGTTGGGAAAGGTGTTTGCCAAGCGTTAAGAGGATTGGGAGCTTTCGTTTGTATTTCGGAAATAGATCCGATTTGTGCAC ] [-] EMBL CD166123 [ GTATGTGGTTATGG GAAGTTGGG AAGGTAGTTGGCAAGCGTTAAGAGGA TGGGAGCTTTCGTTTG ATTTCGGAAATAGATCCGATTTGTGCACTTCAAGCCTGCATGGATGGTTATCGTGTTGTAAAAAATGATGAAGTTATACGTTCAGTGGATATTGTGGTTACTTGCACTGGGAATAAAGGTGTCATTACTCGTGCTCATATGGATCAAATGAAAAGTGGTTGTGTTGTATGCAATATGGGTCACTCTAACACCGAAATCGATGTTCGATCTCTTCAAACACCTGATTTAACATGGGAGCGTGTTCGGTCACAAGTGGATCATGTTAATTGGATGGATGGTAAACGTATTGTTCTTATAGCTGAGGGTCGTTTGGCGAATTTAAGTTGTTCAACTGTTCCATCTATTGTTGT ] [+] EMBL CD195092 [ TGTTTGCCAAGCGTTAAGAGGATTGGGAGCTTTCGTTTGTATTTCGGAAATAGATCCGATTTGTGCACTTCAAGCCTGCATGGATGGTTATCGTGTTGTAAAAATTGATGAAGTTATACGTTCAGTGGATATTGTGGTTACTTGCACTGGGAATAAAGGTGTCATTACTCGGGCTCATATGGATCAAATGAAAAGTGGTTGTGTTGTATGCAATATGGGTCACTCTAACACCGAAATCGATGTTCGATCTCTTCAAACACCTGATTTAACATGGGAGCGTGTTCGATCACAAGTGGATCATGTTATTTGGATGGATGGTAAACGTATTGTTCTTATAGCTGAGGGTCGTTTGGCGAATTTAAGTTGTTCAACTGTTCCATCTATTGTTGTCTCTGTTAGCGCCAGTACTCAAATATTAGCTTTGATTGAAATTATAC ATGCTCCTGCTGGTCGTTAT AAAATGA ] [+] EMBL SM536 [ AGCGTTAAGAGGATTGGGAGCTTTCGTTTGTATTTCGGAAATAGATCCGATTTGTGCACTTCAAGCCTGCATGGATGGTTATCGTGTTGTAAAAATTGATGAAGTTATACGTTCAGTGGATATTGTGGTTACTTGCACTGGGAATAAAGGTGTCATTACTCGGGCTCATATGGATCAAATGAAAAGTGGTTGTGTTGTATGCAATATGGGTCACTCTNACACCGAAATCGATGTTCGATCTCTTCAAACACCTGATTTANCATGGGAGCGTGTTCGATCACACGT ] [+] EMBL CD081345 [ ggcacgAGGACTCATTACTCGGGCTCATATGGATCAAATGAAAAGTGGTTGTGTTGTATGCAATATGGGTCACTCTAACACTCAAATCGATGTTCGATCTCTTCAAACACCTGATTTAACATGGGAGCGTGTTCGATCACAAGTGGATCATGTTATTTGGATGGATGGTAAACGTATTGTTCTTATAGCTGAGGGTCGTTTGGCGAATTTAAGTTGTTCAACTGTTCCATCTATTGTTGTCTCTGTTAGCGCCAGTACTCAAATATTAGCTTTGATTG AATTATACAATGCTCCTGCTGGTCGTTATAAAAATGATGTGTATTTATTACCGAAAAAAATGGATGAATATGTGGCAACATTGCATCTTCCATTATTCAATGGTCGAATAACTGAACTCACTGATGAACAAGCTCGATATTTAGGTGTAAATAAAACAGGACCATTTAAACCGAGTAATTACAAATACTAAACTTGTTCTCATTCTTCGTTTCTGCTCATGCACTGATTGCTGTTACATTTATTGGGAAATGTCTTCCTGTTTAACATGTATACTTTGCATCGATTTGGTTTTCGTAAAAAGTATGGTAGAATATTACATNTAATTTACTTTAAATCAATATGTTTGAAGTATGAAATTTCTCATCCTCCTTACTCTGNTTATTCTCAATAATTTTCAATTACATTCCAATAACTATTGTGTCAAAGAGTTGCTTTATATTAATCTAGTATATTTCCATGTTTCACCGTTCATTTAACCATACGCCTCTCCTTATTAAACTTGGTTGGCAGGATTTACCGTTAAAAAAA AAACAAATTTTTGA ] [+] EMBL AW017315 [ TCACTCTAACACCGAAATCGATGTTCGATCTCTTCAAACACCTGATTTAACATGGGAGCGTGTTCGATCACAAGTGGATCATGTTATTTGGATGGATGGTAAACGTATTGTTCTTATAGCTGAGGGTCGTTTGGCGAATTTAAGCTGTTCAACTGTTCCATCTATTGTTGTCTCTGTTAGCGCCAGTACTCAAATATTAGCTTTGATTG AATTATACAATGCTCCTGCTGGTCGTTATAAAAATGATGTGTATTTATTACCGAAAAAAATGGATGAATATGTGGCAACATTGCATCTTCCATTATTCAATGGTCGAATAACTGAACTCACTGATGAACAAGCTCGATATTTAGGTGTAAATAAAACAGGACCATTTAAACCGAGTAATTACAAATACTAAACTTGTTCTCATTCTTCGTTTCTGCTCATGCACTGATTGCTGTTACATTTATTGGGAAATGTCTTCCTGTTTAACATGTATACTTTGCATCGATTTGGTTTTCGTAAAAAGTATGGTAGAATATTACATCTAATTTACTTTAAATAAATATG TTGAAGTATG AATTTCTCATCCT CTTACTCTGGTTATTCTC ATAAATTTCAATTACATTCCAATAACTATT ] [+] EMBL AW017389 [ TCACTCTAACACCGAAATCGATGTTCGATCTCTTCAAACACCTGATTTAACATGGGAGCGTGTTCGATCACAAGTGGATCATGTTATTTGGATGGATGGTAAACGTATTGTTCTTATAGCTGAGGGTCGTTTGGCGAATTTAAGCTGTTCAACTGTTCCATCTATTGTTGTCTCTGTTAGCGCCAGTACTCAAATATTAGCTTTGATTG AATTATACAATGCTCCTGCTGGTCGTTATAAAAATGATGTGTATTTATTACCGAAAAAAATGGATGAATATGTGGCAACATTGCATCTTCCATTATTCAATGGTCGAATAACTGAACTCACTGATGAACAAGCTCGATATTTAGGTGTAAATAAAACAGGACCATTTAAACCGAGTAATTACAAATACTAAACTTGTTCTCATTCTTCGTTTCTGCTCATGCACTGATTGCTGTCACATTTAT ] [+] EMBL CD179157 [ TCACTCTAACACCGAAATCGATGTTCGATCTCTTCAAACACCTGATTTAACATGGGAGCGTGTTCGATCACAAGTGGATCATGTTATTTGGATGGATGGTAAACGTATTGTTCTTATAGCTGAGGGTCGTTTGGCGAATTTAAGTTGTTCAACTGTTCCATCTATTGTTGTCTCTGTTAGCGCCAGTACTCAAATATTAGCTTTGATTG AATTATACAATGCTCCTGCTGGTCGTTATAAAAATGATGTGTATTTATTACCGAAAAAAATGGATGAATATGTGG ] [-] EMBL CD073994 [ TTAACATGGGAGCGTGTTCGATCACAAGTGGATCATGTTATTTGGATGGATGGTAAACGTATTGTTCTTATAGCTGAGGGTCGTTTGGCGAATNTAAGCTGTTCAACTGTTCCATCTATTGTTGTCTCTGTTAGCGCCAGTACTCAAATATTAGCTTTGATTG AATTATACAATGCTCCTGCTGGTCGTTATAAAAATGATGTGTATTTATTACCGAAAAAAATGGATGAATATGTGGCAACATTGCATCTTCCATTATTCAATGGTCGAATAACTGAACTCACTGATGAACAAGCTCGATATTTAGGTGTAAATAAAACAGGACCATTTAAACCGAGTAATTACAAATACTAAACTTGTTCTCATTCTTCGTTTCTGCTCATGCACTGATTGCTGTTACATTTATTGGGAAATGTCTTCCTGTTTAACATGTATACTTTGCATCGATTTGGTTTTCGTAAAAAGTATGGTAGAATATTACATCTAATTTACTTTAAATAAATATG TTGAAGTATG AATTTCTCATCCT CTTACTCTGTTTATTCTC ATAAATTTCAATTACATTCCAATAACTATTGTGTAAAAGAGTTGCTTTATATTAATCTAGTATATTTTCATGTTTCACCGTTAATTTAA CATATGTCTTTCCTTATTAATCTTGTTTGtaga ] [-] EMBL CD146077 [ ATGTTATTTGGATGGATGGTAAACGTATTGTTCTTATAGCTGAGGGTCGTTTGGCGAATTTAAGCTGTTCAACTGTTCCATCTATTGTTGTCTCTGTTAGCGCCAGTGCTCAAATATTAGCTTTGATTG AATTATACAATGCTCCTGCTGGTCGTTATAGAAATGATGTGTATTTATTACCGAAAAAAATGGATGAATATGTGGCAACATTGCATCTTCCATTATTCAATGGTCGAATAACTGAACTCACTGGTGAACAGGCTCGATATTTAGGTGTAAATAAAACAGGACCATTTAAACCGAGTAATTACAAGTACTAAACTTGTTCTCATTCTTCGTT ] [-] EMBL CD189134 [ TGGTAAACGTATTGTTCTTATAGCTGAGGGTCGTTTGGCGAATTTAAGTTGTTCAACTGTTCCATCTATTGTTGTCTCTGTTAGCGCCAGTACTCAAATATTAGCTTTGATTG AATTATACAATGCTCCTGCTGGTCGTTATAAAAACGATGTGTATTTATTACCGAAAAAAATGGATGAATATGTGGCAACATTGCATCTTCCATTATTCAATGGTCGAATAACTGAACTCACTGATGAACAAGCTCGATATTTAGGTG ] [+] EMBL CD131412 [ GTAAACGTATTGTTCCTATAGCTGAGGGTCGTTTGGCGAATTTAAGCTGTTCAACTGTTCCATCTATTGTTGTCTCTGTTAGCGCCAGTACTCAAATATTAGCTTTGATTG AATTATACAATGCTCCTGCTGGTCGTTATAAAAATGATGTGTATTTATTACCGAAAAAAATGGATGAATATGTGGCAACATTGCATCTTCCATTATTCAATGGTCGAATAACTGAACTCACTGATGAACAAGCTCGATATTTAGGTGTAAATAAAACAGGACCATTTAAACCGAGTAATTACAAATACTAAACTTGTTCTCATTCTTCGTTTCTGCTCATGCACTGATTGCTGTTACATTTATTGGGAAATGTCTTCCTGTTTAACATGTATACTTTGCATCGATTTGGTTTTCGTAAAAAGTATGGTAGAATATTACATCTAATTTACTTTAAATAAATATG TTGAAGTATG AATTTCTCATCCT CTTACTCTGTTTATTCTC ATAAATTTCAATTACATTCCAATAACTATTGTGTAAAAGAGTTGCTTTATATTAATCTAGTATATTTTCATGTNTCA ] [-] EMBL CD075177 [ TGTTCAACTGTTCCATCTATTGTTGTCTCTGTTAGCGCCAGTACTCAAATATTAGCTTTGATTG AATTATACAATGCTCCTGCTGGTCGTTATAAAAATGATGTGTATTTATTACCGAAAAAAATGGATGAATATGTGGCAACATTGCATCTTCCATTATTCAATGGTCGAATAACTGAACTCACTGATGAACAAGCTCGATATTTAGGTGTAAATAAAACAGGACCATTTAAACCGAGTAATTACAAATACTAAACTTGTTCTCATTCTTCGTTTCTGCTCATGCACTGATTGCTGTTACATTTATTGGGAAATGTCTTCCTGTTTAACATGTATACTTTGCATCGATTTGGTTTTCGTAAAAAGTATGGTAGAATATTACATCTAATTTACTTTAAATAAATATG TTGAAGTATG AATTTCTCATCCT CTTACTCTGTTTATTCTC ATAAATTTCAATTACATTCCAATAACTATTGTGTAAAAGAGTTGCTTTATATTAATCTAGTATATTTTCATGTTTCACCGTTAATTTAA CATATGTCTTTCCTTATTAATCTT GTTTGTA GATTTAGCGTTAAAAAAAGAAANTAATTTTTGAT] consensusID : consensus_10702#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 618 fasta sequence [TGAAAGGGTTAGAGTAAGCAGCCTTGTCTGACATCAGTCTACTTGTAATTCGTTTGTGAGCTTTCCTCTATACACAGCTTTGCAATTTAGTCCATCGTATGAATTCTGAATGATGATGTTGACGATTTTCTCAGGTACACCATAGTGTCGAAGTAGTTTCCATAATGTTCTCCTATCCACACTGTCTAATACTCTCTCATAATCAAGGTAGTCGATGTGTAGTAGAGAGTTCTATTCAATTGATTTTCCAACAATGATCTTCTTTTAAAACAAATTAGTGATTTATTCTAATTTCTCATATTCTATTCCAATTCATCTCTCAGGTTTTGGATGATGGTGGCGACTTAACTCATCAGCTGCATAAAAATTACAAGGAATTACTGGCTGGTATATGTGGAATAGTTGAGGAAAGTGTGACAGGTGTTCATCGTCTTTATCAGTACGTGAAATCTGGCACATTGGGAGTGCCAGCTATGAATATTAGCGACAGTATAACCAAATCAAAATTCGATAATTTTTATTTGTGCAAAGAATCTATTGTTGATTCCCTTAAGCGAACTACAGATATGATGATCAGTGGTAAGACCGTATTAGTATGTGGTTATGGTGAAGTTGGGA] [+] EMBL CD115033 [TGAAAGGGTTAGAGTAAGCAGCCTTGTCTGACATCAGTCTACTTGTAATTCGTTTGTGAGCTTTCCTCTATACACAGCTTTGCAATTTAGTCCATCGTATGAATTCTGAATGATGATGTTGACGATTTTCTCAGGTACACCATAGTGTCGAAGTAGTTTCCATAATGTTCTCCTATCCACACTGTCTAATACTCTCTCATAATCAAGGTAGTCGATGTGTAGTAGAGAGTTCTATTCAATTGATTTTCCAACAATGATCTTCTTTTAAAACAAATTAGTGATTTATTCTAATTTCTCATATTCTATTCCAATTCATCTCTCAGGTTTTGGATGATGGTGGCGACTTAACTCATCAGCTGCATAAAAATTACAAGGAATTACTGGCTGGTATATGTGGAATAGTTGAGGAAAGTGTGACAGGTGTTCATCGTCTTTATCAGTACGTGAAATCTGGCACATTGGGAGTGCCAGCTATGAATATTAGCGACAGTATAACCAAATCAAAATTCGATAATTTTTATTTGTGCAAAGAATCTATTGTTGATTCCCTTAAGCGAACTACAGATATGATGATCAGTGGTAAGACCGTATTAGTATGTGGTTATGGTGAAGTTGGGA] [+] EMBL CD115030 [TGAAAGGGTTAGAGTAAGCAGCCTTGTCTGACATCAGTCTACTTGTAATTCGTTTGTGAGCTTTCCTCTATACACAGCTTTGCAATTTAGTCCATCGTATGAATTCTGAATGATGATGTTGACGATTTTCTCAGGTACACCATAGTGTCGAAGTAGTTTCCATAATGTTCTCCTATCCACACTGTCTAATACTCTCTCATAATCAAGGTAGTCGATGTGTAGTAGAGAGTTCTATTCAATTGATTCTCCAACAATGATCTTCTTTTAAAACAAATTAGTGATTTATTCTAATTTCTCATATTCTATTCCAATTCATCTCTCAGGTTTTGGATGATGGTGGCGACTTAACTCATCAGCTGCATAAAAATTACAAGGAATTACTGGCTGGTATATGTGGAATAGTTGAGGAAAGTGTGACAGGTGTTCATCGTCTTTATCAGTACGTGAAATCTGGCACATTGGGAGTGCCAGCTATGAATATTAGCGACAGTATAACCAAACCAAAATTCGATAATTTTTATTTGTGCAAAGAATCTATTGTTGA ] [+] EMBL CD115082 [TGAAAGGGTTAGAGTAAGCAGCCTTGTCTGACATCAGTCTACTTGTAATTCGTTTGTGAGCTTTCCTCTATACACAGCTTTGCAATTTAGTCCATCGTATGAATTCTGAATGATGATGTTGACGATTTTCTCAGGTACACCGTAGTGTCGAAGTAGTTTCCATAATGTTCTCCTATCCACACTGTCTAATACTCTCTCATAATCAAGGTAGTCGATGTGTAGTAGAGAGTTCTATTCAATTGATTTTCCAACAATGATCTTCTTTTAAAACAAATTAGTGATTTATTCTAATTTCTCATATTCTATTCCAATTCATCTCTCAGGTTTTGGATGATGGTGGCGACTTAACTCATCAGCTGCATAAAAATTACAAGGAATTACTGGCTGGTATATGTGGAATAGTTGAGGAAAGTGTGACAGGTGTTCATCGTCTTTATCAGTACGTGAAATCTGGCACATTGGGAGTGCCAGCTATGAATATTAGCGACAGTATAACCAAATCAAAATTCGATAATTTTTATTTGTG ] [+] EMBL AF155786 [ CAGGTGTTCATCGTCTTTATCAGTACGTGANATCTNGCACATTGGGAGTGCCAGCTATGAATATTAGCGACAGTATAACCAAATCAAAA ] consensusID : consensus_10702#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 545 fasta sequence [GAATTATACAATGCTCCTGCTGGTCGTTATAAAAATGATGTGTATTTATTACCGAAAAAAATGGGAAATAGATGGCATGAGCGAAGTTAATTTTATTACAAGATGAATATGTGGCAACATTGCATCTTCCATTATTCAATGGTCGAATAACTGAACTCACTGATGAACAAGCTCGATATTTAGGTGTAAATAAAACAGGACCATTTAAACCGAGTAATTACAAATACTAAACTTGTTCTCATTCTTCGTTTCTGCTCATGCACTGATTGCTGTTACATTTATTGGGAAATGTCTTCCTGTTTAACATGTATACTTTGCATCGATTTGGTTTTCGTAAAAAGTATGGTAGAATATTACATCTAATTTACTTTAAATAAATATGTTGAAGTATGAATTTCTCATCCTCTTACTCTGTTTATTCTCATAAATTTCAATTACATTCCAATAACTATTGTGTAAAAGAGTTGCTTTATATTAATCTAGTATATTTTCATGTTTCACCGTTAATTTAACATATGTCTTTCCTTATTAATCTTGTTTGTAGA] [-] EMBL AI067555 [GAATTATACAATGCTCCTGCTGGTCGTTATAAAAATGATGTGTATTTATTACCGAAAAAAATGGGAAATAGATGGCATGAGCGAAGTTAATTTTATTACAAGATGAATATGTGGCAACATTGCATCTTCCATTATTCAATGGTCGAATAACTGAACTCACTGATGAACAAGCTCGATATTTAGGTGTAAATAAAACAGGACCATTTAAACCGAGTAATTACAAATACTAAACTTGTTCTCATTCTTCGTTTCTGCTCATGCACTGATTGCTGTTACATTTATTGGGAAATGTCTTCCTGTTTAACATGTATACTTTGCATCGATTTGGTTTTCGTAAAAAGTATGGTAGAATATTACATCTAATTTACTTTAAATAAATATGTTGAAGTATGAATTTCTCATCCTCTTACTCTGTTTATTCTCATAAATTTCAATTACATTCCAATAACTATTGTGTAAAAGAGTTGCTTTATATTAATCTAGTATATTTTCATGTTTCACCGTTAATTTAACATATGTCTTTCCTTATTAATCTTGTTTGTAGA] consensusID : consensus_10702#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 467 fasta sequence [GAAACTTCTTCGACACTATGGTGTACCTGAAAAAATCGTCAACACCATGCGGAATTCATACGACGGACCTGGACCTTTTATCCCATTCACACCAACAGATGCAGGCCATGACAAGTAGTGCAGAAGAAGTCTCTGCATCAGTGGACCTCAACATACACAAGGGGAAAACCAAGATCCCCAAATACAATATGGCGAACACTAACCCGATCACACTTGATGGAGAAACTCTGTAAGAGATGGAAACGTTCAAGTACCTATCTGGACAACATCATCGATGGACAAGGAGGATACGATGCAGACGTAAAGGCAAGGATTGGTACAGTAAGGATAGCATTCCTATAGTTGAACAACATATTGAAACTCAAAACAGCTGCCAATTAACATAAAAGTCACATTCTCTAATACGAACATCAGGACCAGGTCCTACGGTACTGAGCTGGAACTCAGAGAATTACCAAAACCATAAT] [+] EMBL CD068166 [GAAACTTCTTCGACACTATGGTGTACCTGAAAAAATCGTCAACACCATGCGGAATTCATACGACGGACCTGGACCTTTTATCCCATTCACACCAACAGATGCAGGCCATGACAAGTAGTGCAGAAGAAGTCTCTGCATCAGTGGACCTCAACATACACAAGGGGAAAACCAAGATCCCCAAATACAATATGGCGAACACTAACCCGATCACACTTGATGGAGAAACTCTGTAAGAGATGGAAACGTTCAAGTACCTATCTGGACAACATCATCGATGGACAAGGAGGATACGATGCAGACGTAAAGGCAAGGATTGGTACAGTAAGGATAGCATTCCTATAGTTGAACAACATATTGAAACTCAAAACAGCTGCCAATTAACATAAAAGTCACATTCTCTAATACGAACATCAGGACCAGGTCCTACGGTACTGAGCTGGAACTCAGAGAATTACCAAAACCATAAT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_10702#0 GGTGGATACCCANCGTAGTTTGGATGATGGTGGCGACTTAACTCATCAGCTGCATAAAAA 60 consensus_10702#2 ------------------------------------------------------------ consensus_10702#1 ------------------------------------------------------------ consensus_10702#3 ------------------------------------------------------------ consensus_10702#0 TTACAAGGAATTACTGACTGGTATATGTGGAATAGTTGAGGAAAGTGTGACAGGTGTTCA 120 consensus_10702#2 ------------------------------------------------------------ consensus_10702#1 ------------------------------------------------------------ consensus_10702#3 ------------------------------------------------------------ consensus_10702#0 TCGTCTTTATCAGTACGTGAAATCTGGCACATTGGGAGTGCCAGCTATGAATGTTAGCGA 180 consensus_10702#2 ------------------------------------------------------------ consensus_10702#1 ------------------------------------------------------------ consensus_10702#3 ------------------------------------------------------------ consensus_10702#0 CAGTATAACCAAATCAAAATTTGATAATTTTTATTTGTGCAAAGAATCTATTGTTGATTC 240 consensus_10702#2 ------------------------------------------------------------ consensus_10702#1 ------------------------------------------------------------ consensus_10702#3 ------------------------------------------------------------ consensus_10702#0 CCTTAAGCGAACTACAGATATGATGATCAGTGGTAAGACCGTATTAGTATGTGGTTATGG 300 consensus_10702#2 ------------------------------------------------------------ consensus_10702#1 ------------------------------------------------------------ consensus_10702#3 ------------------------------------------------------------ consensus_10702#0 TGAAGTTGGGAAAGGTGTTTGCCAAGCGTTAAGAGGATTGGGAGCTTTCGTTTGTATTTC 360 consensus_10702#2 ------------------------------------------------------------ consensus_10702#1 ------------------------------------------------------------ consensus_10702#3 ------------------------------------------------------------ consensus_10702#0 GGAAATAGATCCGATTTGTGCACTTCAAGCCTGCATGGATGGTTATCGTGTTGTAAAAAT 420 consensus_10702#2 ------------------------------------------------------------ consensus_10702#1 ------------------------------------------------------------ consensus_10702#3 ------------------------------------------------------------ consensus_10702#0 TGATGAAGTTATACGTTCAGTGGATATTGTGGTTACTTGCACTGGGAATAAAGGTGTCAT 480 consensus_10702#2 ------------------------------------------------------------ consensus_10702#1 ------------------------------------------------------------ consensus_10702#3 ------------------------------------------------------------ consensus_10702#0 TACTCGGGCTCATATGGATCAAATGAAAAGTGGTTGTGTTGTATGCAATATGGGTCACTC 540 consensus_10702#2 ------------------------------------------------------------ consensus_10702#1 ------------------------------------------------------------ consensus_10702#3 ------------------------------------------------------------ consensus_10702#0 TAACACCGAAATCGATGTTCGATCTCTTCAAACACCTGATTTAACATGGGAGCGTGTTCG 600 consensus_10702#2 ------------------------------------------------------------ consensus_10702#1 ------------------------------------------------------------ consensus_10702#3 ------------------------------------------------------------ consensus_10702#0 ATCACAAGTGGATCATGTTATTTGGATGGATGGTAAACGTATTGTTCTTATAGCTGAGGG 660 consensus_10702#2 ------------------------------------------------------------ consensus_10702#1 ------------------------------------------------------------ consensus_10702#3 ------------------------------------------------------------ consensus_10702#0 TCGTTTGGCGAATTTAAGTTGTTCAACTGTTCCATCTATTGTTGTCTCTGTTAGCGCCAG 720 consensus_10702#2 ------------------------------------------------------------ consensus_10702#1 --------------TGAAAGGGTTAGAGTAAGCAGCCTTGTCTGACATCAGTCTACTTGT 46 consensus_10702#3 ------------------------------------------------------------ consensus_10702#0 TACTCAAATATTAGCTTTGATTGAATTATACAATGCTCCTGCT--GGTCGTTATAAAAAT 778 consensus_10702#2 ----------------------GAATTATACAATGCTCCTGCT--GGTCGTTATAAAAAT 36 consensus_10702#1 AATTCGTTTGTGAGCTTTCCTCTA--TACACAGCTTTGCAATTTAGTCCATCGTATGAAT 104 consensus_10702#3 ------------------------------------------------------------ consensus_10702#0 GATGTGTATTTATTACCGAAAAAAATGG-------------------------------- 806 consensus_10702#2 GATGTGTATTTATTACCGAAAAAAATGGGAAATAGATGGCATGAGCGAAGTTAATTTTAT 96 consensus_10702#1 TCTGAATGATGAT-GTTGACGATTTTCTCAGGTACACCATAGTGTCGAAGTAGTTTCCAT 163 consensus_10702#3 ------------------------------------------------------------ consensus_10702#0 ------ATGAATATGTGGCAACATTGCATCTTCCATTATTCAATGGTCGA-ATAACTGAA 859 consensus_10702#2 TACAAGATGAATATGTGGCAACATTGCATCTTCCATTATTCAATGGTCGA-ATAACTGAA 155 consensus_10702#1 -----AATGTTCTCCTATCCACACTG--TCTAATACTCTCTCATAATCAA-GGTAGTCGA 215 consensus_10702#3 --------GAAACTTCTTCGACACTATGGTGTACCTGAAAAAATCGTCAACACCATGCGG 52 * * *** * ** ** * * consensus_10702#0 CTCACTGATGAACAAGCTCGATATTTAGGTGTAAATAAAACAGGACCATTTAAACCG-AG 918 consensus_10702#2 CTCACTGATGAACAAGCTCGATATTTAGGTGTAAATAAAACAGGACCATTTAAACCG-AG 214 consensus_10702#1 TGTGTAGTAGAGAGTTCTATTCAATTGATTTTCCAACAATGATCTTCTTTTAAAACA-AA 274 consensus_10702#3 AATTCATACGACGGACCTGGACCTTTTATCCCATTCACACCAACAG-ATGCAGGCCATGA 111 ** ** ** * * * * * consensus_10702#0 T-AATTACAAATACTAAACTTGTTCTCATTCTTCGTTTCTGCTCATG-CACTGATTGCTG 976 consensus_10702#2 T-AATTACAAATACTAAACTTGTTCTCATTCTTCGTTTCTGCTCATG-CACTGATTGCTG 272 consensus_10702#1 TTAGTGATTTATTCTAAT----TTCTCATATTCTATTCCAATTCATCTCTCAGGTTTTGG 330 consensus_10702#3 CAAGTAGTGCAGAAGAAG-----TCTC-TGCATCAGTGGACCTCAACATACACAAGGGGA 165 * * * ** **** * * *** * consensus_10702#0 TTACATTTATTGGGAAATGTCTTC--CTGTTTAACATGTATACTTTGCATCGATTTGGTT 1034 consensus_10702#2 TTACATTTATTGGGAAATGTCTTC--CTGTTTAACATGTATACTTTGCATCGATTTGGTT 330 consensus_10702#1 ATGATGGTGGCGACTTAACTCATCAGCTGCATAAAAATTACAAGGAATTACTGGCTGGTA 390 consensus_10702#3 AAACCAAGATCCCCAAATACAATATGGCGAACACTAACCCGATCACAC-TTGATGGAGAA 224 * * * * * * * consensus_10702#0 TTCGTAAAA-AGTATGGTAGAATATTACATCTAATTT-AC-TTTAAATAAATATGTT-GA 1090 consensus_10702#2 TTCGTAAAA-AGTATGGTAGAATATTACATCTAATTT-AC-TTTAAATAAATATGTT-GA 386 consensus_10702#1 TATGTGGAATAGTTGAGGAAAGTGTGACAGGTGTTCA-TCGTCTTTATCAGTACGTG-AA 448 consensus_10702#3 ACTCTGTAAGAGATGGAAACGTTCAAGTACCTATCTGGACAACATCATCGATGGACAAGG 284 * ** ** * * * * * ** * consensus_10702#0 AGTATGAATTTCTCATCCTCTTACTCTGTTTATTCTCA----TAAATTTCAATTACATTC 1146 consensus_10702#2 AGTATGAATTTCTCATCCTCTTACTCTGTTTATTCTCA----TAAATTTCAATTACATTC 442 consensus_10702#1 ATCTGGCACATTGGGAGTGCCAGCTATGAATATTAGCGACAGTATAACCAAATCAAAATT 508 consensus_10702#3 AGGATACGATGCAGACGTAAAGGCAAGGATTGGTACAGTAAGGATAGCATTCCTATAGTT 344 * * * * * * * * * * consensus_10702#0 CAATAACTATT----GTGTAAAAGAGTTGCTTTATATTAATCTAGTATATTTTCATGTTT 1202 consensus_10702#2 CAATAACTATT----GTGTAAAAGAGTTGCTTTATATTAATCTAGTATATTTTCATGTTT 498 consensus_10702#1 CGATAATTTTTATTTGTGCAAAGAATCTATTGTTGATTCCCTTAAGCGAACTACAGATAT 568 consensus_10702#3 GAACAACATATTGAAACTCAAAACAGCTGCCA---ATTAACATAA--AAGTCACATTCTC 399 * ** * *** * * *** ** * ** consensus_10702#0 CACCGTTAATTTAACATAT--GTCTTTCCTTATTAATCTTGGTTGGCAGGATTTACCGTT 1260 consensus_10702#2 CACCGTTAATTTAACATAT--GTCTTTCCTTATTAATCTTG-TTTGTAGA---------- 545 consensus_10702#1 GATGATCAGTGGTAAGACC--GTATTAGTATGTGGTTATGGTGAAGTTGGGA-------- 618 consensus_10702#3 TAATACGAACATCAGGACCAGGTCCTACGGTACTGAGCTGGAACTCAGAGAATTACCAAA 459 * * * ** * * * * consensus_10702#0 AAAAAAAAAACAAATTTTTGAT 1282 consensus_10702#2 ---------------------- consensus_10702#1 ---------------------- consensus_10702#3 ACCATAAT-------------- 467 |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||