These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10705#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 20 consensus length = 494 fasta sequence [ACCATTCATCCAATCAAAATCTGTCACTAGCGAATTATACAGAAAAGAACATTATCAACCAAATATTGATTGAATTACGCGAGCATATTACTTGCCATTGTTTAAAGGTTATATTGTATGGTAAAGTTGATCAGGTGAAAAGTTTACAGTCATATATTCATTTACTGTCGCAATTATCACCTTCATTAAATACATACAATAATAATATGAATGACTATAGAACTGGTGAAATTGAATATGAAGAAACTAGTGACCAAGTTTCATGTGCTCACTGGTGGGCTCAAATGTTG-AATATTCTTTGGGAATATAGGTGTGATCAATTCACGTCAGTCTTACAATCATCATCATCATCAAAATTGTTGGTAACAAAAAATCAGTCAAATCAAACATATCATGTTGTTACACCCCAATCACTTTTCAACTGTCCTTGTTTGAGTGATCTAGTT-AAAGTTTT-ATCGATCATTAATAAATTCGATTCTTTGGAATGG--AAATCA] [-] EMBL CD064026 [ACCATTCATCCAATCAAAATCTGTCACTAGCGAATTATACAGAAAAGAACATTATCAACCAAATATTGATTGAATTACGCGAGCATATTACTTGCCATTGTTTAAAGGTTATATTGTATGGTAAAGTTGATCAGGTGAAAAGTTTACAGTCATATATTCATTTACTGTCGCTATTATCACCTTCAT AATACATACAAT ] [+] EMBL CD126006 [ CATTGTTTAAAGGTTATATTGTATGGTAAAGTTGATCAGGTGAAAAGTTTACAGTCATATATTCATTTACTGTCGCAATTATCACCTTCATTAAATACATACAATAATAATATGAATGACTATAGAACTGGTGAAATTGAATATGAAGAAACTAGTGACCAAGTTTCATGTGCTCACTGGTGGGCTCAAATGTTG AATATTCTTTGGGAATATAGGTGTGATCAATTCACGTCAGTCTTACAATCATCATCATCATCAAAATTGTTGGTAACAAAAAATCAGTCAAATCAAACATATCATGTTGTTACACCCCAATCACTTTTCAACTGTCCTTGTTTGAGTGATCTAGTT AAAGTTTT ATCGATCATTAATAAATTCGATTCTTTGGAATGG AAATC ] [+] EMBL CD125994 [ CATTGTTTAAAGGTTATATTGTATGGTAAAGTTGATCAGGTGAAAAGTTTACAGTCATATATTCATTTACTGTCGCAATTATCACCTTCATTAAATACATACAATAATAATATGAATGACTATAGAACTGGTGAAATTGAATATGAAGAAACTAGTGACCAAGTTTCATGTGCTCACTGGTGGGCTCAAATGTTG AATATTCTTTGGGAATATAGGTGTGATCAATTCACGTCAGTCTTACAATCATCATCATCATCAAAATTGTTGGTAACAAAAAATCAGTCAAATCAAACATATCATGTTGTTACACCCCAATCACTTTTCAACTGTCCTTGTTTGAGTGATCTAGTT AAAGTTTT ATCGATCATTAATAAATTCGATTCTTTGGAATGG AAATC ] [+] EMBL CD125969 [ CATTGTTTAAAGGTTATATTGTATGGTAAAGTTGATCAGGTGAAAAGTTTACAGTCATATATTCATTTACTGTCGCAATTATCACCTTCATTAAATACATACAATAATAATATGAATGACTATAGAACTGGTGAAATTGAATATGAAGAAACTAGTGACCAAGTTTCATGTGCTCACTGGTGGGCTCAAATGTTG AATATTCTTTGGGAATATAGGTGTGATCAATTCACGTCAGTCTTACAATCATCATCATCATCAAAATTGTTGGTAACAAAAAATCAGTCAAATCAAACATATCATGTTGTTACACCCCAATCACTTTTCAACTGTCCTTGTTTGAGTGATCTAGTT AAAGTTTT ATCGATCATTAATAAATTCGATTCTTTGGAATGG AAATC ] [+] EMBL CD125979 [ CATTGTTTAAAGGTTATATTGTATGGTAAAGTTGATCAGGTGAAAAGTTTACAGTCATATATTCATTTACTGTCGCAATTATCACCTTCATTAAATACATACAATAATAATATGAATGACTATAGAACTGGTGAAATTGAATATGAAGAAACTAGTGACCAAGTTTCATGTGCTCACTGGTGGGCTCAAATGTTG AATATTCTTTGGGAATATAGGTGTGATCAATTCGCGTCAGTCTTACAATCATCATCATCATCAAAATTGTTGGTAACAAAAAATCAGTCAAATCAAACATATCATGTTGTTACACCCCAATCACTTTTCAACTGTCCTTGTTTGAGTGATCTAGTT AAAGTTTT ATCGATCATTAATAAATTCGATTCTTTGGAATGG AAATC ] [+] EMBL CD125906 [ CATTGTTTAAAGGTTATATTGTATGGTATAGTTGATCAGGTGAAAAGTTTACAGTCATATATTCATTTACTGTCGCAATTATCACCTTCATTAAATACATACAATAATAATATGAATGACTATAGAACTGGTGAAATTGAATATGAAGAAACTAGTGACCAAGTTTCATGTGCTCACTGGTGGGCTCAAATGTTG AATATTCTTTGGGAATATAGGTGTGATCAATTCACGTCAGTCTTACAATCATCATCATCATCAAAATTGTTGGTAACAAAAAATCAGTCAAATCAAACATATCATGTTGTTACACCCCAATCACTTTTCAACTGTCCTTGTTTGAGTGATCTAGTT AAAGTTTT ATCGATCATTAATAAATTCGATTCTTTGGAATGG AAATC ] [+] EMBL CD126037 [ CATTGTTT AGGTTATATTGTATGGTAAAGTTGATCAGGTGAAAAGTTTACAGTCATATATTCATTTACTGTCGCAATTATCACCTTCATTAAATACATACAATAATAATATGAATGACTATAGAACTGGTGAAATTGAATATGAAGAAACTAGTGACCAAGTTTCATGTGCTCACTGGTGGGCTCAAATGTTG AATATTCTTTGGGAATATAGGTGTGATCAATTCACGTCAGTCTTACAATCATCATCATCATCAAAATTGTTGGTAACAAAAAATCAGTCAAATCAAACATATCATGTTGTTACACCCCAATCACTTTTCAACTGTCCTTGTTTGAGTGATCTAGTT AAAGTTTT ATCGATCATTAATAAATTCGATTCTTTGGAATGG AAATC ] [+] EMBL CD062920 [ CATTGTTTAAAGGTTATATTGTATGGTAAAGTTGATCAGGTGAAAAGTTTACAGTCATATATTCATTTACTGTCGCAATTATCACCTTCATTAAATACATACAATAATAATATGAATGACTATAGAACTGGTGAAATTGAATATGAAGAAACTAGAGACCAAGTTTCATGTGCTCACTGGTGGGCTCAAATGTTG AATATTCTTTGGGAATATAGGTGTGATCAATTCACGTCAGTCTTACAATCATCATCATCATCAAAATTGTTGGTAACAAAAAATCAGTCAAATCAAACATATCATGTTGTTACACCCCAATCACTTTTCAACTGTCCTTGTTTGAGTGATCTAGTT AAAGTTTT ATCGATCATTAATAAATTCGATTCTTTGGAATGG AAATC ] [-] EMBL CD126125 [ ATTGTTTAAAGGTTATATTGTATGGTAAAGTTGAACAGGTGAAAAGTTTACAGTCATATATTCATTTACTGTCGCAATTATCACCTTCATTAAATACATACAATAATAATATGAATGACTATAGAACTGGTGAAATTGAATATGAAGAAACTAGTGACCAAGTTTCATGTGCTCACTGGTGGGCTCAAATGTTG AATATTCTTTGGGAATATAGGTGTGATCAATTCACGTCAGTCTTACAATCATCATCATCATCAAAATTGTTGGTAACAAAAAATCAGTCAAATCAAACATATCATGTTGTTACACCCCAATCACTTTTCAACTGTCCTTGTTTGAGTGATCTAGTT AAAGTTTT ATCGATCATTAATAAATTCGATTCTTTGGAATG AATC ] [-] EMBL CD125963 [ ATTGTTTAAAGGTTATATTGTATGGTAAAGTTGATCAGGTGAAAAGTTTACAGTCATATATTCATTTACTGTCGCAATTATCACCTTCATTAAATACATACAATAATAATATGAATGACTATAGAACTGGTGAAATTGAATATGAAGAAACTAGTGACCAAGTTTCATGTGCTCACTGGTGGGCTCAAATGTTG AATATTCTTTGGGAATATAGGTGTGATCAATTCACGTCAGTCTTACAATCATCATCATCATCAAAATTGTTGGTAACAAAAAATCAGTCAAATCAAACATATCATGTTGTTACACCCCAATCACTTTTCAACTGTCCTTGTTTGAGTGATCTAGTT AAAGTTTT ATCGATCATTAATAAATTCTATTCTTTGGAATGG AAt ] [-] EMBL CD126122 [ ATTGTTTAAAGGTTATATTGTATGGTAAAGTTGATCAGGTGAAAAGTTTACAGTCATATATTCATTTACTGTCGCAATTATCACCTTCATTAAATACATACAATAATAATATGAATGACTATAGAACTGGTGAAATTGAATATGAAGAAACTAGTGACCAAGTTTCATGTGCTCACTGGTGGGCTCAAATGTTG AATATTCTTTGGGAATATAGGTGTGATCAATTCACGTCAGTCTTACAATCATCATCATGATCAAAATTGTTGGTAACAAAAAATCAGTCAAGTCAAACATATCATGTTGTTACACCCC ATCACTTTCCAACTGTCCTTGTTTGAGTGATCTAGTT AAAGTTTT ATCGATCATTAATAAATTCGATTCTTTGGAATG AATC ] [-] EMBL CD126081 [ ATTGTTTAAAGGTTATATTGTATGGTAAAGTTGATCAGGTGAAAAGCTTACAGTCATATATTCATTTACTGTCGCAATTGTCACCTTCATTAAATACATACAATAATAATATGAATGACTATAGAACTGGTGAAATTGAATATGAAGAAACTAGTGACCAAGTTTCATGTGCTCACTGGTGGGCTCAAATGTTG AATATTCTTTGGGAATATAGGTGTGATCAATTCACGTCAGTCTTACAATCATCATCATCATCAAAATTGTTGGTAACAAAAAATCAGTCGAATCAAACATATCATGTTGTTACACCCCAATCACTTTTCAACTGTCCTTGTTTGAGTGATCTAGTT AAAGTTTT ATCGATCA TAATAAATTCGATTCTTTGGAATGG AA ] [-] EMBL CD125985 [ ATTGTTTAAAGGTTATATTGTATGGTAAAGTTGATCAGGTGAAAAGTTTACAGTCATATATTCATTTACTGTCGCAATTATCACCTTCATTAAATACATACAATAATAATATGAATGACTATAGAACTGGTGAAATTGAATATGAAGAAACTAGTGACCAAGTTTCATGTGCTCACTGGTGGGCTCAAATGTTGCAAT CTGGTTGGGAATATAGct ] [-] EMBL CD125882 [ ATTGTTTAAAGGTTATATTGTATGGTAAAGTTGATCAGGTGAAAAGTTTACAGTCATATATTCATTTACTGTCGCAATTATCACCTTCATTAAATACATACAATAATAATATGAATGACTATAGAACTGGTGAAATTGAATATGAAGAAACTAGTGACCAAGTTTCATGTGCTCACTGGTGGGCTCAAATGTTG AATATTCTTTGGGAATATAGGTGTGATCAATTCACGTCAGTCTTACAATCATCATCATCATCAAAATTGTTGGTAACAAAAAATCAGTCAAATCAAACATATCATGTTGTTACACCCCAATCACTTTTCAACTGTCCTTGTTTGAGTGATCTAGTT AAAGTTTT ATCGATCATTAATAAATTCGATTCTTTGGAATGG AATCA] [-] EMBL CD126079 [ ATTGTTTAAAGGTTATATTGTATGGTAAAGTTGATCAGGTGAAAAGTTTACAGTCATATATTCATTTACTGTCGCAATTATCACCTTCATTAAATACATACAATAATAATATGAATGACTATAGAACTGGTGAAATTGAATATGAAGAAACTAGTG ] [+] EMBL CD126061 [ TTGTTTAAAGGTTATATTGTATGGTAAAGTTGATCAGGTGAAAAGTTTACAGTCATATATTCATTTACTGTCGCAATTATCACCTTCATTAAATACATACAATAATAATATGAATGACTATAGAACAGGTGAGATTGAATATGAAGAAACTAGTGACCAAGTTTCATGTGCTCACTGGTGGGCTCAAATGTTG AATATTCTTTGGGAATGTAGGTGTGATCAATTCACGTCAGTCTTACAATCATCATCATCATCAAAATTGTTGGTAACAAAAAATCAGTCAAATCAAACATATCATGTTGTTACACCCCAATCACTTTTCAACTGTCCTTGTTTGAGTGATCTAGTT AAAGTTTT ATCGATCATTAATAAATTCGATTCTTTGGAATGG AAATC ] [+] EMBL CD126180 [ atgTTAAAGGTTATATTGTATGGTAAAG TGATCAGGTGAAAAGTTTACAGTCATATATTCATTTACTGTCGCAATTATCACCTTCATTAAATACATACAATAATAATATGAATGACTATAGAACTGGTGAAATTGAATATGAAGAAACTAGTGACCAAGTTTCATGTGCTCACTGGTGGGCTCAAATGTTG AATATTCTTTGGGAATATAGGTGTGATCAATTCACGTCAGTCTTACAATCATCATCATCATCAAAATTGTTGGTAACAAAAAATCAGTCAAATCAAACATATCATGTTGTTACACCCCAATCACTTTTCAACTGTCCTTGTTTGAGTGATCTAGTT AAAGTTTT ATCGATCATTAATAAATTCGATTCTTTGGAATGG AAATC ] [-] EMBL CD125898 [ GAATGACTATAGAATTGGTGAAATTGAATATGAAGAAACTAGTGACCAAGTTTCATGTGCTCACTGGTGGGCTCAAATGTTG AATATTCTTTGGGAATATAGGTGTGATCAATTCACGTCAGTCTTACAATCATCATCATCATCAAAATTGTTGGTAACAAAAAATCAGTCAAATCAAACATATCATGTTGTTACACCCCAATCACTTTTCAACTGTCCTTGTTTGAGTGATCTAGTT AAAGTTTT ATCGATCATTAATAAATTCGATTCTTCGGAATGG AAATCA] [+] EMBL CD126080 [ ATGTTG AATATACTTTGGGAATATAGGTGTGATCAATTCACGTCAGTCTTACAATCATCATCATCATCAAAATTGTTGGTAACAAAAAATCAGTCAAATCAAACATATCATGTTGTTACACCCCAATCACTTTTCAACTGTCCTTGTTTGAGTGATCTACTT AAAGTCTT ATCGATCATTAATAAATTCGATACTTTGGAATTGCCAAATC ] [+] EMBL CD125993 [ AGTCAAATCAAACATATCATGTTGTTACGCCCCAATCACTTTTCAACTGTCCTTGTATGAGTGATCTAGTTAAAAGTTTTCATCGATCATTAATAAATTCGATTCTTTGGAATGG AAATC ] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||