These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10748#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 18 consensus length = 2251 fasta sequence [GATGCGTAGATTCTCCGGTTACAGTATGTCGTGATATTCATGGACATTTCTACGATTTAATCGAATTGTTCAAGGTTGGTGGAGATGTACCGGACACTAACTATCTCTTCCTCGGAGATTTTGTTGATCGCGGATATCACAGCGTCGAGACATTCCTTCTTCTCCTTGCACTGAAGGTCAGGTATCCAGACAGAATTACACTCATACGAGGCAACCATGAAAGTCGGCAGATAACAATGGTTTACGGATTTTATGAAGAATGTCTGAGGAAGTACGGCTCAGCGATGGTCTGGCGACAATGTACTGAGATATTTGATTATCTGTGCCTTTCTGCTATTATCGACGGAAGGATATTTTGTGTTCATGGAGGCCTATCACCTACAATTACAACATTGGATCAAATCCGTACCATTGATCGTAAACAGGAAGTCCCACATGATGGTCCAATGTGTGATCTCTTGTGGTCTGATCCGG-AAGAGACTGCTGGTTGGGGGGTGAGCCCCAGAGGTGCTGGCTATTTATTTGGCTCTGACGTTGTAGCCAATTTTAATCAATTAAATCGAATCGATTTCATATGTCGTGCACATCAATTAGTTATGGAAGGTTATCGTTGGCATTTTCATGAAAGTGTTCTTACTGTATGGTCTGCTCCAAATTATTGTTATCGTTGTGGTAATGTTGCCGCTATTTTACGTTTAAATGATCGATTAGATAAAGAATTTTCTATATTTGAAGCTTCACTACAGGATGCCCGGGGTATACCAGCTCGTCGACCAATACCAGACTATTTCCTCTAAAGCATATAAAAACAAACAAACAAAATGTGTTCTATTTTCAATGATAATAATTACAGTTATTATTATTTCCCTTGTTTATAAACCCCATTCCCCTCCCTGTCAATTTTGTAAAATTTTTACTTCTATTTATCGGTGTGTTTTTGTAAAATGTTTTCTTCCCGCCGCCCACCCCCTCTCTACCCCCCTACCCCACTCACCCACCTATCCAATATTGAACTATTATTCCCAAGATTCATACATTGTTTTGTTTGCATTTTTGTTTTTCTCTTTTTGATATCCAATTAAACTAAATTTTTTCTATTAAGTAATTAAATTTTGTATTTGTGTATACAATAATACAATAACTGTTTTGGGGGTGGAAGTGGAAAGAATAAATTTTCTTTTAAAGAAATAACATATTTATATTATGATTATTGTTATTAAATGTAAATTATACTGAATATGTAAAGTATATTTTAAAAAAAAAGAAGAAAAGAAATCAATGATTCAGGGAATCATCATCTG------TCTTCTTCTTCTTCTTCTCCTCGTTGTTGTTGTTGTTTAAGTTTACCATTGTGCATTTCTTAATTCAGCAACTAATTTGATAAAATCATGATGACTTGCATAGAGTTGTAAATCAGAACTGATATCTGTCCAACGTACAGCTTCTGCATCATCACCTGCAGTTAATGGGAATAATGCTAGACAATTGCCAATATCATCGTGAAAATTTACTGCCACAGTTTCCATCCATGCATTATCCGTATTACGTGGATCGTCGACATAACC-TTATAAATCTCAACTCCATGATGAAAAGCATCATCAACACGTTTTACGATCGCTTCTAACTCCTTTGATGAAGCTGTTGTAGAATTTAAAGCTTCTTCAGAAAATTCTCTTTTTAAAGTAGAGGTATAATTTTCACCAGCGTCTACCATACCTCCAGGGATAGCCCATTGACCAGAATCTTTCCGACGAATAGAAACAAACTGAAGAATTGGACGTCCAGTAGTTTTATTTAAACATCGACTGCCTGAGTTGTCAAGTTTCCATCGTGTTACAATTGGATCAGCAGCATGATTAGGACCCCAACGACCAAGAACACCACGTCCAGTAATTCCTGTACGTCCACGAGGATTTAATGGTAATCCATTAGTACTGAATTTATATTGACCCATAAAACTTGTTCTATCAAGTATTCCATCAATTTTATTAAACTGAATAGCTTTATATTTTTCATCATGGTTATCTGGATCAGCCCATGGCTTTTTAGATATTCCTGGAGCTGTGTACGCTACCGGATGATATTCACTCCAAGATACACTCCAACTGACTTTATCATCCGGAACAGGATATCTTTGTATGTCAGAAGTACGAGGGTATGGAGAATTTCTACATTTTACATGTAAATTGGCCACAGTTACAGACGCCATTTTTGAAATGTCGACAATCTGTAAAATAAGTCGAACTCGGTA] [+] EMBL CD152297 [GATGCGTAGATTCTCCGGTTACAGTATGTCGTGATATTCATGGACATTTCTACGATTTAATCGAATTGTTCAAGGTTGGTGGAGATGTACCGGACACTAACTATCTCTTCCTCGGAGATTTTGTTGATCGCGGATATCACAGCGTCGAGACATTCCTTCTTCTCCTTGCACTGAAGGTCAGGTATCCAGACAGAATTACACTCATACGAGGCAACCATGAAAGTCGGCAGATAACAATGGTTTACGGATTTTATGAAGAATGTCTGAGGAAGTACGGCTCAGCGATGGTCTGGCGACAATGTACTGAGATATTTGATTATCTGTGCCTTTCTGCTATTATCGACGGAAGGATATTTTGTGTTCATGGAGGCCTATCACCTACAATTACAACATTGGATCAAATCCGTACCATTGATCGTAAACAGGAAGTCCCACATGATGGTCCAATGTGTGATCTCTTGTGGTCTGATCCGGAAAGAGACTGCTGGTTGGGG ] [+] EMBL CD147618 [ TCGGCAGATAACAATGGTTTACGGATTTTATGAAGAATGTCTGAGGAAGTACGGCTCAGCGATGGTCTGGCGACAATGTACTGAGATATTTGATTATCTGTGCCTTTCTGCTATTATCGACGGAAGGATATCTTGTGTTCATGGAGGCCTATCACCTACAATTACAACATTGGATCAAATCCGCACCATTGATCGTAAACAGGAAGTCCCACATGATGGTCCAATGTGTGATCTCTTGTGGTCTGATCCGG AAGAGACTGCTGGTTGGGGGGTGAGCCCCAGAGGTGCTGGCTATTTATTTGGCTCTGACGTTGTAGCCAATTTTAATCAATTAAATCGAATCGATTTCATATGTCGTGCACATCAATTAGTTATGGA ] [+] EMBL CD079715 [ TGTCTGAGGAAGTACGGCTCAGCGATGGTCTGGCGACAATGTACTGAGATATTTGATTATCTGTGCCTTTCTGCTATTATCGACGGAAGGATATTTTGTGTTCATGGAGGCCTATCACCTACAATTACAACATTGGATCAAATCCGTACCATTGATCGTAAACAGGAAGTCCCACATGATGGTCCAATGTGTGATCTCTTGTGGTCTGATCCGG AAGAGACTGCTGGTTGGGGGGTGAGCCCCAGAGGTGCTGGCTATTTATTTGGCTCTGACGTTGTAGCCAATTTTAATCAATTAAATCGAATCGATTTCATATGTCGTGCACATCAATTAGTTATGGAAGGTTATCGTTGGCATTTTCATGAAAGTGTTCTTACTGTATGGTCTGCTCCAAATTATTGTTATCGTTGTGGTAATGTTGCCGCTATTTTACGTTTAAATGATCGATTAGATAAAGAATTTTCTATATTTGAAGCTTCACTACAGGATGCCCGGGGTATACCAGCTCGTCGACCAATACCAGACTATTTCCTCTAAAGCATATAAAAACAAACAAACAAAATGTGTTCTATTTTCAATGATAATAATTACAGTTATTATTATTTCCCTTGTTTATAAACCCCATTCCCCTCCCTGTCAATTNTGTAAAATTTTTACTTCTATTTATCGGTGTGTTTTgt ] [+] EMBL CD078742 [ TGTCTGAGGAAGTACGGCTCAGCGATGGTCTGGCGACAATGTACTGAGATATTTGATTATCTGTGCCTTTCTGCTATTATCGACGGAAGGATATTTTGTGTTCATGGAGGCCTATCACCTACAATTACAACATTGGATCAAATCCGTACCATTGATCGTAAACAGGAAGTCCCACATGATGGTCCAATGTGTGATCTCTTGTGGTCTGATCCGG AAGAGACTGCTGGTTGGGGGGTGAGCCCCAGAGGTGCTGGCTATTTATTTGGCTCTGACGTTGTAGCCAATTTTAATCAATTAAATCGAATCGATTTCATATGTCGTGCACATCAATTAGTTATGGAAGGTTATCGTTGGCATTTTCATGAAAGTGTTCTTACTGTATGGTCTGCTCCAAATTATTGTTATCGTTGTGGTAATGTTGCCGCTATTTTACGTTTAAATGATCGATTAGATAAAGAATTTTCTATATTTGAAGCTTCACTACAGGATGCCCGGNGTATACCAGCTCGTCGACCAATACCAGACTATTTCCTC ] [+] EMBL CD198621 [ GTACCATTGATCGTAAACAGGAAGTCCCACATGATGGTCCAATGTGTGATCTCTTGTGGTCTGATCCGG AAGAGACTGCTGGTTGGGGGGTGAGCCCCAGAGGTGCTGGCTATTTATTTGGCTCTGACGTTGTAGCCAATTTTAATCAATTAAATCGAATCGATTTCATATGTCGTGCACATCAATTAGTTATGGAAGGTTATCGTTGGCATTTTCATGAAAGTGTTCTTACTGTATGGTCTGCTCCAAATTATTGTTATCGTTGTGGTAATGTTGCCGCTATTTTACGTTTAAATGATCGATTAGATAAAGAATTTTCTATATTTGAAGCTTCACTACAGGATGCCCGGGGTATACCAGCTCGTCGACCAATACCAGACTATTTCCTCTTAAGCATATAAAAACAAACAAACCAAATGTGTTCTAT ] [-] EMBL CD198671 [ TCTCTTGTGGTCTGATCCGG AAGAGACTGCTGGTTGGGGAATGAGCCCCAGAGGTGCTGGCTATTTACTTGGCTCTGACGTTGTAGCCAATTTTAATCAATTAAATCGAATCGATTTCATATGTCGTGCACATCAATTAGTTAAGGAAGGTTATCGTTGGCATTTTCATGAAAGTGTTCTTACTGTATGGTCTGCTCCAAATTATTGTTATCGTTGTGGTAATGTTGCCGCTATTTTACGTTTAAATGATCGATTAGATAAAGAATTTTCTATATTTGAAGCTTCACTACAGGATGCCCGGGGTATACCAGCTCGTCGACCAATACCAGACTATTTCCTCTAAAGCATATAAAAACAAACAAACAAAATGTGTTCTATTTTCAATGATAATAATTACAGTTATTATTATTTCCCTTGTT ] [-] EMBL CD073973 [ TTATCGTTGGCATTTTCATGAAAGTGTTCTTACTGTATGGTCTGCTCCAAATTATTGTTATCGTTGTGGTAATGTTGCCGCTATTTTACGTTTAAATGATCGATTAGATAAAGAATTTTCTATATTTGAAGCTTCACTACAGGATGCCCGGGGTATACCAGCTCGTCGACCAATACCAGACTATTTCCTCTAAAGCATATAAAAACAAACAAACAAAATGTGTTCTATTTTCAATGATAATAATTACAGTTATTATTATTTCCCTTGTTTATAAACCCCATTCCCCTCCCTGTCAATTTTGTAAAATTTTTACTTCTATTTATCGGTGTGTTTTTGTAAAATGTTTTCTTCCCGCCGCCCACCCCCTCTCTACCCCCCTACCCCACTCACCCACCTATCCAATATTGAACTATTATTCCCAAGATTCATACATTGTTTTGTTTGCATTTTTGTTTTTCTCTTTTTGATATCCAATTAAACTAAATTTTTTCTATTAAGTAATTAAATTTTGTATTTGTGTATACAATAATACAATAACTGTTTTGGGGGTGGAAGTGGAAAGAATAAATTTTCTTTTAAAGAAATAACATATTTATATTATGATTATTGTTATTAAATGTAAATTATACTGAATATGTAAA ] [+] EMBL CD114607 [ CTATTTTACGTTTAAATGATCGATTAGATAAAGAATTTTCTATATTTGAAGCTTCACTACAGGATGCCCGGGGTATACCAGCTCGTCGACCAATACCAGACTATTTCCTCTAAAGCATATAAAAACAAACAAACAAAATGTGTTCTACTTTCAATGATAATAATTACAGTTATTATTATTTCCCTTGTTTATAAACCCCATTCCCCTCCCTGTCAATTTTGTAAAATTTTTACTTCTATTTATCGGTGTGTTTTTGTAAAATGTTTTCTTCCCGCCGCCC ] [-] EMBL CD079654 [ ATTAAATTTTGTATTTGTGTATACAATAATACAATAACTGTTTTGGGGGTGGAAGTGGAAAGAATAAATTTTCTTTTAAAGAAATAACATATTTATATTATGATTATTGTTATTAAATGTAAATTATACTGAATATGTAAAGTATATTTTAAAAAAAAAGAAGAAAAGAAATCAATGTCTCAGGGAATCATCATCTG TCTTCTTCTTCTTCTTCTCCTCGTTGTTGTTGTTGTTTAAGTTTACCATTGTGCATTTCTTAATTCAGCAACTAATTTGATAAAATCATGATGACTTGCATAGAGTTGTAAATCAGAACTGATATCTGTCCAACGTACAGCTTCTGCATCATCACCTGCAGTTAATGGGAATAATGCTAGACAATTGCCAATATCATCGTGAAAATTTACTGCCACAGTTTCCATCCATGCATTATCCGTATTACGTGGATCGTCGACATAACC TTATAAATCTCA ] [-] EMBL CD113213 [ ATTCAGGGAATCATCATCTGTCT TCTTCTTCTTCTTCTTCTCCTCGTTGTTGTTGTTGTTTAAGTTTACCATTGTGCATTTCTTAATTCAGCAACTAATTTGATAAAATCATGATGACTTGCATAGAGTTGTAAATCAGAACTGATATCTGTCCAACGTACAGCTTCTGCATCATCACCTGCAGTTAATGGGAATAATGCTAGACAATTGCCAATATCATCGTGAAAATTTACTGCCACAGTTTCCATCCATGCATTATCCGTATTACGTGGATCGTCGACATAACCTTTATAAATCTCAACTCCATGATGAAAAGCATCATCAACACGTTTTACGATCGCTTCTAACTCCTTTGATGAAGCTGTTGTAGAATTTAAAGCTTCTTCAGAAAATTCTCTTTTTAAAGTAGAGGTATAATTTTCACCAGCGT ] [-] EMBL CD113158 [ ATTCAGGGAATCATCATCTG TCTTCTTCTTCTTCTTCTCCTCGTTGTTGTTGTTGTTTAAGTTTACCATTGTGCATTTCTTAATTCAGCAACTAATTTGATAAAATCATGATGACTTGCATAGAGTTGTAAATCAGAACTGATATCTGTCCAACGTACAGCTTCTGCATCATCACCTGCAGTTAATGGGAATAATGCTAGACAATTGCCAATATCATCGTGAAAATTTACTGCCACAGTTTCCATCCATGCATTATCCGTATTACGTGGATCGTCGACATAACCTTTATAAATCTCAACTCCATGATGAAAAGCATCATCAACACGTTTTACGATCGCTTCTAACTCCTTTGATGAAGCTGTTGTAGAATTTAAAGCTTCTTCAGAAAATTCTCTTTTTAAAGTAGAGGTATAATTTTCACCAGCGT ] [-] EMBL CD113207 [ ATTCAGGGAATCATCATCTGTCTTCTTCTTCTTCTTCTTCTTCTCCTCGTTGTTGTTGTTGTTTAAGTTTACCATTGTGCATTTCTTAATTCAGCAACTAATTTGATAAAATCATGATGACTTGCATAGAGTTGTAAATCAGAACTGATATCTGTCCAACGTACAGCTTCTGCATCATCACCTGCAGTTAATGGGAATAATGCTAGACAATTGCCAATATCATCGTGAAAATTTACTGCCACAGTTTCCATCCATGCATTATCCGTATTACGTGGATCGTCGACATAACCTTTATAAATCTCAACTCCATGATGAAAAGCATCATCAACACGTTTTACGATCGCTTCTAACTCCTTTGATGAAGCTGTTGTAGAATTTAAAGCTTCTTCAGAAAGTTCTCTTTTTAAAGTAGAGGTATAATTTTCACCAGCGT ] [-] EMBL CD114683 [ AGCAACTAATTTGATAAAATCATGATGACTTGCATAGAGTTGTAAATCAGAACTGATATCTGTCCAACGTACAGCTTCTGCATCATCACCTGCAGTTAATGGGAATAATGCTAGACAATTGCCAATATCATCGTGAAAATTTACTGCCACAGTTTCCATCCATGCATTATCCGTATTACGTGGATCGTCGACATAACCTTTATAAATCTCAACTCCATGATGAAAAGCATCACCAACACGTTTTACGATCGCTTCTAACTCCTTTGATGAAGCTGTTGTAGAATTTAAAGCTTCTTCAGAAAATTCTCTTTTTAAAGTAGAGGTATAATTTTCACCAGCGTCTACCATACCTCCAGGGATAGCCCATTGACCAGA ] [-] EMBL CD153765 [ TTCTAACTCCTTTGATGAAGCTGTTGTAGAATTTAAAGCTTCTTCAGAAAATTCTCTTTTTAAAGTAGAGGTATAATTTTCACCAGCGTCTACCATACCTCCAGGGATAGCCCATTGACCAGAATCTTTCCGACGAATAGAAACAAACTGAAGAATTGGACGTCCAGTAGTTTTATTTAAACATCGACTGCCTGAGTTGTCAAGTTTCCATCGTGTTACAATTGGATCAGCAGCATGATTAGGACCCCAACGACCAAGAACACCACGTCCAGTAATTCCTGTACGTCCACGAGGATTTAATGGTAATCCATTAGTACTGAATTTATATTGACCCATAAAACTTGTTCTATCAAGTATTCCATCAATTTTATTAAACTGAATAGCTTTATATTTTTCATCATGGTTATCTGGATCAGCCCCTGGCTTTTTAGATATTCCTGGAGCTGTGTACGCTACCGGATGATATTCACTCCAAG ] [-] EMBL CD083517 [ TTTGATGAAGCTGTTGTAGAATTTAAAGCTTCTTCAGAAAATTCTCTTTTTAAAGTAGAGGTATAATTTTCACCAGCGTCTACCATACCTCCAGGGATAGCCCATTGACCAGAATCTTTCCGACGAATAGAAACAAACTGAAGAATTGGACGTCCAGTAGTTTTATTTAAACATCGACTGCCTGAGTTGTCAAGTTTCCATCGTGTTACAATTGGATCAGCAGCATGATTAGGACCCCAACGACCAAGAACACCACGTCCAGTAATTCCTGTACGTCCACGAGGATTTAATGGTAATCCATTAGTACTGAATTTATATTGACCCATAAAACTTGTTCTATCAAGTATTCCATCAATTTTATTAAACTGAATAGCTTTATATTTTTCATCATGGTTATCTGGATCAGCCCATGGCTTTTTAGATATTCCTGGAGCTGTGTACGCTACCGGATGATATTCACTCCAAGATACACTCCAACTGAC TTATCATCCGGAACA GATATCT ] [+] EMBL CD153295 [ AAGCTTCTTCAGAAAATTCTCTTTTTAAAGTAGAGGTATAATTTTCACCAGCGTCTACCATACCTCCAGGGATAGCCCATTGACCAGAATCTTTCCGACGAATAGAAACAAACTGAAGAATTGGACGTCCAGTAGTTTTATTTAAACATCGACTGCCTGAGTTGTCAAGTTTCCATCGTGTTACAATTGGATCAGCAGCATGATTAGGACCCCAACGACCAAGAACACCACGTCCAGTAATTCCTGTACGTCCACGAGGATTTAATGGTAATCCATTAGTACTGAATTTATATTGACCCATAAAACTTGTTCTATCAAGTATTCCATCAATTTTATTAAACTGAATAGCTTTATATTTTTCATCATGGTTATCTGGATCAGCCCATGGCTTTTTAGATATTCCTGGAGCTGTGTACGCTACCGGATGATATTCACTCCAAGATACACTCCAACTGACTNTATCATCCGGAACAGGATATCTTTGTATGTCAGAAGTACGAGGGTATGGAGAATTTCTACATTNTACATGTAAATTGGCCACAGTTACAGACGCCATTTTTGAAATGTCGACAATCTGTAAAATAAGTCGAACTCGGTA] [-] EMBL CD190407 [ TCTTTTTAAAGTAGAGGTATAATTTTCACCAGCGTCTACCATACCTCCAGGGATAGCCCATTGACCAGAATCTTTCCGACGAATAGAAACAAACTGAAGAATTGGACGTCCAGTAGTTTTATTTAAACATCGACTGCCTGAGTTGTCAAGTTTCCATCGTGTTACAATTGGATCAGCAGCATGATTAGGACCCCAACGACCAAGAACA CACG CCAGTAA TCCTGTACGTCCACGAGGATTTAATGGTAATCCATTAGTACTGAATTTATATTGACCCATAAAACTTGTTCTATCAAGTATTCCATCAATTTTATTAAACTGAATAGCTTTATATTCTTCATCATGGTTATCTGGATCAGCCCATGGCTTTTTAGATATTCCTGGAGCTGTGTACGCTACCGGATGATATTCACTCCAAGATACACTCCAACTGACTTTATCATCCGGAACAGGATATCTTTGTATGTCAGAAGTACGAGGGTATGGAGAATTTCTACATTTTACATGTAAATTGGCCACAGTT ] [-] EMBL CD140094 [ cgGTACGTCCACGAGGATTTAATGGTAATCCATTAGTACTGAATTTATATTGACCCATAAAACTTGTTCTATCAAGTATTCCATCAATTTTATTAAACTGAATAGCTTTATATTTTTCATCATGGTTATCTGGATCAGCCCATGGCTTTTTAGATATTCCTGGAGCTGTGTACGCTACCGGATGATATTCACTCCAAGATACACTCCAACTGACTTTATCATCCGGAACAGGATATCTTTGTATGTCAGAAGTACGAGGGTATGGAGAATTTCTACATTTTACATGTAAATTGGCCACAGTTACAGACGCCATTTTTGAAATGTCGACAATCTGTAAAATAAGTCat ] consensusID : consensus_10748#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 458 fasta sequence [CCACGGAGTTTGGGCTCCATTCAGGGAATCATCATCTGTCTTCTTCTTCTTCTCCTCGTTGTTGTTGTTGTTTAAGTTTACCATTGTGCATTTCTTAATTCAGCAACTAATTTGATAAAATCATGATGACCTGCATAGAGTTGTAAATCAGAACTGATATCTGTCCAACGTACAGCTTCTGCATCATCACCTGCAGTTAATGGGAATAATGCTAGACAATTGCCAATATCATCGTGAAAATTTACTGCCACAGTTTCCATCCATGCATTATCCGTATTACGTGGATCGTCGACATAACCTTTATAAATCTCAACTCCGTGATGAAAAGCATCATCAACACGTTTTACGATCGCTTCTAACTCCTTTGATGAAGCTGTTGTAGAATTTAAAGCTTCTTCAGAAAATTCTCTTTTTAAAGTAGAGGTATAATTTTCACCAGCGTCTACCATACCTCCGTG] [+] EMBL CD144811 [CCACGGAGTTTGGGCTCCATTCAGGGAATCATCATCTGTCTTCTTCTTCTTCTCCTCGTTGTTGTTGTTGTTTAAGTTTACCATTGTGCATTTCTTAATTCAGCAACTAATTTGATAAAATCATGATGACCTGCATAGAGTTGTAAATCAGAACTGATATCTGTCCAACGTACAGCTTCTGCATCATCACCTGCAGTTAATGGGAATAATGCTAGACAATTGCCAATATCATCGTGAAAATTTACTGCCACAGTTTCCATCCATGCATTATCCGTATTACGTGGATCGTCGACATAACCTTTATAAATCTCAACTCCGTGATGAAAAGCATCATCAACACGTTTTACGATCGCTTCTAACTCCTTTGATGAAGCTGTTGTAGAATTTAAAGCTTCTTCAGAAAATTCTCTTTTTAAAGTAGAGGTATAATTTTCACCAGCGTCTACCATACCTCCGTG] consensusID : consensus_10748#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 436 fasta sequence [AAGTTTACCATTGTGCATTTCTTAATTCAGCAACTAATTTGATAAAATCATGATGACTAGCATAGAGTTGTAAATCAGAACTGATATCTGTCCAACGTACAGCTTCTGCATCATCACCTGCAGTTAATGGGAATAATGCTAGACAATTGCCAATATCATCGTGAAAATTTACTGCCACAGTTTCCATCCATGCATTATCCGTATTACGTGGATCGTCGACATAACCTTTATAAATCTCAACTCCATGATGAAAAACATAAAGCTATTCAGTTTAATAAAATTGATGGAATACTTGATAGAACAAGTTTTATGGGTCAATATAAATTCAGTACTAATGGATTACCATTAAATCCTCGTGGACGTACAGGAATTACTGGACGTGGTGTTCTTGGTCGTTGGGGTCCTAATCATGCTGCTGATCCAATTGTAACACGAT] [+] EMBL CD160950 [AAGTTTACCATTGTGCATTTCTTAATTCAGCAACTAATTTGATAAAATCATGATGACTAGCATAGAGTTGTAAATCAGAACTGATATCTGTCCAACGTACAGCTTCTGCATCATCACCTGCAGTTAATGGGAATAATGCTAGACAATTGCCAATATCATCGTGAAAATTTACTGCCACAGTTTCCATCCATGCATTATCCGTATTACGTGGATCGTCGACATAACCTTTATAAATCTCAACTCCATGATGAAAAACATAAAGCTATTCAGTTTAATAAAATTGATGGAATACTTGATAGAACAAGTTTTATGGGTCAATATAAATTCAGTACTAATGGATTACCATTAAATCCTCGTGGACGTACAGGAATTACTGGACGTGGTGTTCTTGGTCGTTGGGGTCCTAATCATGCTGCTGATCCAATTGTAACACGAT] consensusID : consensus_10748#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 284 fasta sequence [GGGGGGCGTGTGGACCCCCCTACCCCACTCACCCACCTATCCAATATTGAACTATTATTCCCAAGATTCATACATTGTTTTGTTTGCATTTTTGTTTTTCTCTTTTTGATATCCAATTAAACTAAATTTTTTCTATTAAGTAATTAAAAATTGTATTTGTGTATACAATAATACAATAACTGTTTTGGGGGTGGAAGTGGAAAGAATAAATTTTCTTTTAAAGAAATAACATATTTATATTATGATTATTGTTATTAAATGTAAATTATACTGAATATGTAAAG] [-] EMBL CD073204 [GGGGGGCGTGTGGACCCCCCTACCCCACTCACCCACCTATCCAATATTGAACTATTATTCCCAAGATTCATACATTGTTTTGTTTGCATTTTTGTTTTTCTCTTTTTGATATCCAATTAAACTAAATTTTTTCTATTAAGTAATTAAAAATTGTATTTGTGTATACAATAATACAATAACTGTTTTGGGGGTGGAAGTGGAAAGAATAAATTTTCTTTTAAAGAAATAACATATTTATATTATGATTATTGTTATTAAATGTAAATTATACTGAATATGTAAAG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_10748#0 GATGCGTAGATTCTCCGGTTACAGTATGTCGTGATATTCATGGACATTTCTACGATTTAA 60 consensus_10748#3 ------------------------------------------------------------ consensus_10748#1 ------------------------------------------------------------ consensus_10748#2 ------------------------------------------------------------ consensus_10748#0 TCGAATTGTTCAAGGTTGGTGGAGATGTACCGGACACTAACTATCTCTTCCTCGGAGATT 120 consensus_10748#3 ------------------------------------------------------------ consensus_10748#1 ------------------------------------------------------------ consensus_10748#2 ------------------------------------------------------------ consensus_10748#0 TTGTTGATCGCGGATATCACAGCGTCGAGACATTCCTTCTTCTCCTTGCACTGAAGGTCA 180 consensus_10748#3 ------------------------------------------------------------ consensus_10748#1 ------------------------------------------------------------ consensus_10748#2 ------------------------------------------------------------ consensus_10748#0 GGTATCCAGACAGAATTACACTCATACGAGGCAACCATGAAAGTCGGCAGATAACAATGG 240 consensus_10748#3 ------------------------------------------------------------ consensus_10748#1 ------------------------------------------------------------ consensus_10748#2 ------------------------------------------------------------ consensus_10748#0 TTTACGGATTTTATGAAGAATGTCTGAGGAAGTACGGCTCAGCGATGGTCTGGCGACAAT 300 consensus_10748#3 ------------------------------------------------------------ consensus_10748#1 ------------------------------------------------------------ consensus_10748#2 ------------------------------------------------------------ consensus_10748#0 GTACTGAGATATTTGATTATCTGTGCCTTTCTGCTATTATCGACGGAAGGATATTTTGTG 360 consensus_10748#3 ------------------------------------------------------------ consensus_10748#1 ------------------------------------------------------------ consensus_10748#2 ------------------------------------------------------------ consensus_10748#0 TTCATGGAGGCCTATCACCTACAATTACAACATTGGATCAAATCCGTACCATTGATCGTA 420 consensus_10748#3 ------------------------------------------------------------ consensus_10748#1 ------------------------------------------------------------ consensus_10748#2 ------------------------------------------------------------ consensus_10748#0 AACAGGAAGTCCCACATGATGGTCCAATGTGTGATCTCTTGTGGTCTGATCCGGAAGAGA 480 consensus_10748#3 ------------------------------------------------------------ consensus_10748#1 ------------------------------------------------------------ consensus_10748#2 ------------------------------------------------------------ consensus_10748#0 CTGCTGGTTGGGGGGTGAGCCCCAGAGGTGCTGGCTATTTATTTGGCTCTGACGTTGTAG 540 consensus_10748#3 ------------------------------------------------------------ consensus_10748#1 ------------------------------------------------------------ consensus_10748#2 ------------------------------------------------------------ consensus_10748#0 CCAATTTTAATCAATTAAATCGAATCGATTTCATATGTCGTGCACATCAATTAGTTATGG 600 consensus_10748#3 ------------------------------------------------------------ consensus_10748#1 ------------------------------------------------------------ consensus_10748#2 ------------------------------------------------------------ consensus_10748#0 AAGGTTATCGTTGGCATTTTCATGAAAGTGTTCTTACTGTATGGTCTGCTCCAAATTATT 660 consensus_10748#3 ------------------------------------------------------------ consensus_10748#1 ------------------------------------------------------------ consensus_10748#2 ------------------------------------------------------------ consensus_10748#0 GTTATCGTTGTGGTAATGTTGCCGCTATTTTACGTTTAAATGATCGATTAGATAAAGAAT 720 consensus_10748#3 ------------------------------------------------------------ consensus_10748#1 ------------------------------------------------------------ consensus_10748#2 ------------------------------------------------------------ consensus_10748#0 TTTCTATATTTGAAGCTTCACTACAGGATGCCCGGGGTATACCAGCTCGTCGACCAATAC 780 consensus_10748#3 ------------------------------------------------------------ consensus_10748#1 ------------------------------------------------------------ consensus_10748#2 ------------------------------------------------------------ consensus_10748#0 CAGACTATTTCCTCTAAAGCATATAAAAACAAACAAACAAAATGTGTTCTATTTTCAATG 840 consensus_10748#3 ------------------------------------------------------------ consensus_10748#1 ------------------------------------------------------------ consensus_10748#2 ------------------------------------------------------------ consensus_10748#0 ATAATAATTACAGTTATTATTATTTCCCTTGTTTATAAACCCCATTCCCCTCCCTGTCAA 900 consensus_10748#3 ------------------------------------------------------------ consensus_10748#1 --------------------------------------CCACGGAGTTTGGGCTCCATTC 22 consensus_10748#2 ------------------------------------------------------------ consensus_10748#0 TTTTGTAAAATTTTTACTTCTATTTATCGGTGTGTTTTTGTAAAATGTTTTCTTCCCGCC 960 consensus_10748#3 ------------------------------------------------------------ consensus_10748#1 AGGGAATCATCATCTGTCTTCTTCTTCTTCTCCTCGTTGTTGTTGTTGTTTAAGTTTACC 82 consensus_10748#2 ---------------------------------------------------AAGTTTACC 9 consensus_10748#0 GCCCACCCCCTCTCTACCCCCCTACCCCACTCACCCACCTAT-----CCAATATTGAACT 1015 consensus_10748#3 --GGGGGGCGTGTGGACCCCCCTACCCCACTCACCCACCTAT-----CCAATATTGAACT 53 consensus_10748#1 ATTGTGCATTTCTTAATTCAGCAACTAATTTGATAAAATCATGATGACCTGCATAGAGTT 142 consensus_10748#2 ATTGTGCATTTCTTAATTCAGCAACTAATTTGATAAAATCATGATGACTAGCATAGAGTT 69 * * * * * ** * * * ** * ** ** * consensus_10748#0 ATTATTCCCAAGATTCATACATTGTTTTGTTTGCA-TTTTTGTTTT-TCTCTTTTTGATA 1073 consensus_10748#3 ATTATTCCCAAGATTCATACATTGTTTTGTTTGCA-TTTTTGTTTT-TCTCTTTTTGATA 111 consensus_10748#1 GTAAAT--CAGAACTGATAT-CTGTCCAACGTACAGCTTCTGCATCATCACCTGCAGTTA 199 consensus_10748#2 GTAAAT--CAGAACTGATAT-CTGTCCAACGTACAGCTTCTGCATCATCACCTGCAGTTA 126 * * * ** * * *** *** * ** ** ** * ** * * * ** consensus_10748#0 TCC--AATTAAACTAAATTTTTTCTATTAA-GTAATTAAATTTTGTATTTGT-GTATACA 1129 consensus_10748#3 TCC--AATTAAACTAAATTTTTTCTATTAA-GTAATTAAAAATTGTATTTGT-GTATACA 167 consensus_10748#1 ATGGGAATAATGCTAGACAATTGCCAATATCATCGTGAAAATTTACTGCCACAGTTTCCA 259 consensus_10748#2 ATGGGAATAATGCTAGACAATTGCCAATATCATCGTGAAAATTTACTGCCACAGTTTCCA 186 *** * *** * ** * * ** * * *** ** ** * ** consensus_10748#0 ATAATACAATAACTGTTTTGGGGGTGGAAGTGGAAAGA-----ATAAATTTT--CTTTTA 1182 consensus_10748#3 ATAATACAATAACTGTTTTGGGGGTGGAAGTGGAAAGA-----ATAAATTTT--CTTTTA 220 consensus_10748#1 TCCATGCATTATCCGTATTACGTGGATCGTCGACATAACCTTTATAAATCTCAACTCCGT 319 consensus_10748#2 TCCATGCATTATCCGTATTACGTGGATCGTCGACATAACCTTTATAAATCTCAACTCCAT 246 ** ** ** * ** ** * * * * * ****** * ** consensus_10748#0 AAGAAATAACATATTTATATTATGATTATTGTTATTAAATGTAAATTATACTGAATA--- 1239 consensus_10748#3 AAGAAATAACATATTTATATTATGATTATTGTTATTAAATGTAAATTATACTGAATA--- 277 consensus_10748#1 GATGAAAAGCATCAT-CAACACGTTTTACGATCGCTTCTAACTCCTTTGATGAAGCT-GT 377 consensus_10748#2 GATGAAAAACATAAAGCTATTCAGTTTAATAAAATTGATGGAATACTTGATAGAACAAGT 306 * ** * *** * *** * * * * consensus_10748#0 TGTAAAGTATATTTTAAAAAAAAAGAAGAAAAGAAATCAATGATTCAGGGAATCATCATC 1299 consensus_10748#3 TGTAAAG----------------------------------------------------- 284 consensus_10748#1 TGTAGAATTTAAAGCTTCTTCAG----AAAATTCTCTTTTTAAA-----GTAGAGGTATA 428 consensus_10748#2 TTTATGGGTCAATATAAATTCAGTACTAATGGATTACCATTAAATCCTCGTGGACGTACA 366 * ** consensus_10748#0 TGTCTTCTTCTTCTTCTTCTCCTCGTTGTTGTTGTTGTTTAAGTTTACCATTGTGCATTT 1359 consensus_10748#3 ------------------------------------------------------------ consensus_10748#1 ATTTTCACCAG-CGTC-TACCATACCTCCGTG---------------------------- 458 consensus_10748#2 GGAATTACTGGACGTGGTGTTCTTGGTCGTTGGGGTCCTAATCATGCTGCTGATCCAATT 426 consensus_10748#0 CTTAATTCAGCAACTAATTTGATAAAATCATGATGACTTGCATAGAGTTGTAAATCAGAA 1419 consensus_10748#3 ------------------------------------------------------------ consensus_10748#1 ------------------------------------------------------------ consensus_10748#2 GTAACACGAT-------------------------------------------------- 436 consensus_10748#0 CTGATATCTGTCCAACGTACAGCTTCTGCATCATCACCTGCAGTTAATGGGAATAATGCT 1479 consensus_10748#3 ------------------------------------------------------------ consensus_10748#1 ------------------------------------------------------------ consensus_10748#2 ------------------------------------------------------------ consensus_10748#0 AGACAATTGCCAATATCATCGTGAAAATTTACTGCCACAGTTTCCATCCATGCATTATCC 1539 consensus_10748#3 ------------------------------------------------------------ consensus_10748#1 ------------------------------------------------------------ consensus_10748#2 ------------------------------------------------------------ consensus_10748#0 GTATTACGTGGATCGTCGACATAACCTTATAAATCTCAACTCCATGATGAAAAGCATCAT 1599 consensus_10748#3 ------------------------------------------------------------ consensus_10748#1 ------------------------------------------------------------ consensus_10748#2 ------------------------------------------------------------ consensus_10748#0 CAACACGTTTTACGATCGCTTCTAACTCCTTTGATGAAGCTGTTGTAGAATTTAAAGCTT 1659 consensus_10748#3 ------------------------------------------------------------ consensus_10748#1 ------------------------------------------------------------ consensus_10748#2 ------------------------------------------------------------ consensus_10748#0 CTTCAGAAAATTCTCTTTTTAAAGTAGAGGTATAATTTTCACCAGCGTCTACCATACCTC 1719 consensus_10748#3 ------------------------------------------------------------ consensus_10748#1 ------------------------------------------------------------ consensus_10748#2 ------------------------------------------------------------ consensus_10748#0 CAGGGATAGCCCATTGACCAGAATCTTTCCGACGAATAGAAACAAACTGAAGAATTGGAC 1779 consensus_10748#3 ------------------------------------------------------------ consensus_10748#1 ------------------------------------------------------------ consensus_10748#2 ------------------------------------------------------------ consensus_10748#0 GTCCAGTAGTTTTATTTAAACATCGACTGCCTGAGTTGTCAAGTTTCCATCGTGTTACAA 1839 consensus_10748#3 ------------------------------------------------------------ consensus_10748#1 ------------------------------------------------------------ consensus_10748#2 ------------------------------------------------------------ consensus_10748#0 TTGGATCAGCAGCATGATTAGGACCCCAACGACCAAGAACACCACGTCCAGTAATTCCTG 1899 consensus_10748#3 ------------------------------------------------------------ consensus_10748#1 ------------------------------------------------------------ consensus_10748#2 ------------------------------------------------------------ consensus_10748#0 TACGTCCACGAGGATTTAATGGTAATCCATTAGTACTGAATTTATATTGACCCATAAAAC 1959 consensus_10748#3 ------------------------------------------------------------ consensus_10748#1 ------------------------------------------------------------ consensus_10748#2 ------------------------------------------------------------ consensus_10748#0 TTGTTCTATCAAGTATTCCATCAATTTTATTAAACTGAATAGCTTTATATTTTTCATCAT 2019 consensus_10748#3 ------------------------------------------------------------ consensus_10748#1 ------------------------------------------------------------ consensus_10748#2 ------------------------------------------------------------ consensus_10748#0 GGTTATCTGGATCAGCCCATGGCTTTTTAGATATTCCTGGAGCTGTGTACGCTACCGGAT 2079 consensus_10748#3 ------------------------------------------------------------ consensus_10748#1 ------------------------------------------------------------ consensus_10748#2 ------------------------------------------------------------ consensus_10748#0 GATATTCACTCCAAGATACACTCCAACTGACTTTATCATCCGGAACAGGATATCTTTGTA 2139 consensus_10748#3 ------------------------------------------------------------ consensus_10748#1 ------------------------------------------------------------ consensus_10748#2 ------------------------------------------------------------ consensus_10748#0 TGTCAGAAGTACGAGGGTATGGAGAATTTCTACATTTTACATGTAAATTGGCCACAGTTA 2199 consensus_10748#3 ------------------------------------------------------------ consensus_10748#1 ------------------------------------------------------------ consensus_10748#2 ------------------------------------------------------------ consensus_10748#0 CAGACGCCATTTTTGAAATGTCGACAATCTGTAAAATAAGTCGAACTCGGTA 2251 consensus_10748#3 ---------------------------------------------------- consensus_10748#1 ---------------------------------------------------- consensus_10748#2 ---------------------------------------------------- |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||