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Schistosoma mansoni
cluster # 10749 cluster # 10749       Sequences # 21       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10749#0 length = 1291 sequences # 17  
consensus_10749#1 length = 442 sequences # 4  

consensusID : consensus_10749#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 17
consensus length = 1291
fasta sequence
                              [CTCAAGCACATACTCAAGGTCATC-GTTGGCTCAACTTG-TCCTGACATGTGTGTGTGTTTAGAAGCTTTCAAAGAATCCCTTAAGTATCATTTACCAG-GGTTAAATGAG-GATAGTCTCAA-GTTGGCACT-GAAGGGTATCGCTGGAGA-A-GATGACCTCCA-AACTTAT-AATTGGGTTAGG-TTTGCCACAACCTATCTCCAACCACAGTGTGATTTTGTCTGGGCTGGGAAGGAGA-TTGACAAAGCACTTGTTAATTCTACGTATATCAACGGCAGTGAGTTCTCTTTGTCAGATTTGGCTATTTGGACTTTTCTAGAAATCAATCCAGATTGGCACAAACTCAATGAGTCGTACAAAACTGATGGCTCCGTAAAGTCGTTTGTTAATCTTAAACAATACTATGATCGACTTATAACCTTACCATCAGTTCGGAAACTTAAAACAGAAATCTATGAATCACGGCTACAGCCAAGAGGCGTTTCAGTTAACTCAGGGCCACCTAGTAATACTATTGGTAAAACTCATGCGTCTGATATGCTATTTGAAAAGGGAGGAAAGTTCGGTGAACTTCCTGGTGCGAGAGTTGGGGAAGTAGTCGTTCGTTTTCCTCCGGAAGCCAGTGGATATTTGCATATTGGACATGCCAAAGCAGCGCTTCTAAATCAACACTATAGGGATATTTTCAAAGGTCGTTTGATATTACGTTTTGATGATACTAATCCTGATAAAGAAAAAGAATGCTTTGAAAAGTCGATTCTTTCAGATCTTCCTCGAATTGGTGTCACATGGGATGCTATATCGTCAACATCTGATCATTTTGATGAGATGTTAAAACTGTGTGAACAACTAATCAAGGAAGGCAAAGCATATGTTGATAACACAGACACGGAAACTATTCGTGTACAGAGGGAAGCACGCCAAATGTCCGCTTGTAGAGATAATTCTATCGAACAAAATTTGTCTTGGTGGGGAGAAATGAAAAAGGGGACGGAACAAGGACTAAAATGTTGCGTACGTGCTAAAATTGATATGTCTTCTAATAACGGTGCTTTACGTGATCCTACAATATATCGTTGTAAAATAGAACCCCATGTTCGGACAGGTTCTAAATATAAAGTGTATCCATTGTATGATTTTGCTTGCCCAGTAGTGGATAGTATTGAAGGCGTAACCCACGCTTTGCGAACATCTGAATATAATGATAGAAATGAACAGTATGCATGGATATGTAAAAGTCTAGGTATACATTGTCCAATTGTGATCGACTATAGCCGTCTTGCTCTACAAAATACAG]

[+] EMBL CD110979             [CTCAAGCACATACTCAAGGTCATC GTTGGCTCAACTTGTTCCTGACATGTGTGTGTGTTTAGAAGCTTTCAAAGAATCCCTTAAGTATCATTTACCAG GGTTAAATGAG GATAGTCTCAA GTTGGCACT GAAGGGTATCGCTGGAGA A TATGACCTCCA AACTTAT AATTGGGTTAGG TTTGCCACAACCTATCTCCAACCACAGTGTGATTTTGTCTGGGCTGGGAAGGAGA TTGACAAAGCACTTGTTAATTCTACGTATATCAACGGCAGTGAGTTCTCTTTGTCAGATTTGGCTATTTGGACTTTTCTAGAAATCAATCCAGATTGGCACAAACTCAATGAGTCGTACAAAACTGATGGCTCCGTAAAGTCGTTTGTTAATCTTAAACAATACTATGATCGACTTATAACCTTACCATCAGTTCGGAAACTTAAAACAGAAATCTATGAATCACGGCTACAGCCAAGAGGCGTATCAGTTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CD161084             [              CAAGGTCATC GTTGGCTCAACTTG TCCTGACATGTGTGTGTGTTTAGAAGCTTTCAAAGAATCCCTTAAGTATCATTTACCAG GGTTAAATGAG GATAGTCTCAA GTTGGCACT GAAGGGTATCGCTGGAGA A GATGACCTCCA AACTTAT AATTGGGTTAGG TTTGCCACAACCTATCTCCAACCACAGTGTGATTTTGTCTGGGCTGGGAAGGAGA TTGACAAAGCACTTGTTAATTCTACGTATACCAACGGCAGTGAGTTCTCTTTGTCAGATTTGGCTATTTGGACTTTTCTAGAAATCAATCCAGATTGGCACAAACTCAATGAGTTGTACAAAACTGATGGCTCCGTAAAGTCGTTTGTTAATCTTAAACAGTACTATGATCGACTTATAACCTTACCATCAGTTCGGAAACTTAAAACAGAAATCTATGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CD110971             [              CAGGGTCATC GTTGGCTCAACTTG TCCTGACA  TGTGTGTGTATAGAAGCTTTCAAAGAATCCCTTAAGTATCATTTACCAGTGGTTAAATGAGAGATAGTCTCAACGTTGGCACTGGAAGGGTATCGCTGGAGANATGATGACCTCCAGAACTTATGGGTGGGGTTAGGTTTTGCCACAACCTATCTCCAACCACAGTGTGATTTTGTCTGGGCTGGGAAGGACATTTGACAAAGCACTTGTTAATTCTACGTATATCAACGGCAGTGAGTTCTCTTTGTCAGATTTGGCTATTTGGACTTTTCTAGAAATCAATCCAGATTGGCACAAACTCAATGAGTCGTACAAAACTGATGGCTCCGTAAAGTCGTTTGTTAATCTTAAACAATACTATGATCGACTTATAACCTTACCATCAGTTCGGAAACTTAAAACAGAAATCTATGAATCACGGGTACAGCCCAGAGGCGTTTCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CD110931             [              CAAGGTCATCTGTTGGCTCAACTTG TCCTGACATGTGTGTGTGTTTAGAAGCTTTCAAAGAATCCCTTAAGTATCATTTACCAG GGTTAAATGAG GATAGTCTCAA GTTGGCACT GAAGGGTATCGCTGGAGA A GATGACCTCCA AACTTAT AATTGGGTTAGG TTTGCCACAACCTATCTCCAACCACAGTGTGATTTTGTCTGGGCTGGGAAGGACA TTGACAAAGCACTTGTTAATTCTACGTATATCAACGGCAGTGAGTTCTCTTTGTCAGATTTGGCTATTTGGACTTTTCTAGAAATCAATCCAGATTGGCACAAACTCAATGAGTCGTACAAAACTGATGGCTCCGTAAAGTCGTTTGTTAATCTTAAACAATACTATAATCGACTTATAACCTTACCATCAGTTCGGAAACTTAAAACAGAAATCTATGAATCACGGCTACAGCCGAGAAGCGTTTCAGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CD111148             [                    CATC GTTGGCCCAACTTG TCCTGACATGTGTGTGTGTTTAGAAGCTTTCAAAGAATCCCTTAAGTATCATTTACCAG GGTTAAATGAG GATAGTCTCAA GTTGGCACT GGAGGGTATCGCTGGAGA A GATGACCTCCA AACTTAT AATTGGGTTAGG TTTGCCACAACCTATCTCCAACCACAGTGTGATTTTGTCTGGGCTGGGAAGGAGA TTGACAAAGCACTTGTTAATTCTACGTATATCAACGGCAGTGAGTTCTCTTTGTCAGATTTGGCCATTTGGACTTTTCTAGAAATCAATCCAGATTGGCACAAACTCAATGAGTCGTACAAAACTGATGGCTCCGTAAAGTCGTTTGTTAATCTTAAACAATACTATGATCGACTTATAACCTTACCATCAGTTCGGAAACTTAAAACAGAAATCTATGAATCACGGCTACAGCCAAGAGGCGTTTCAGTTAAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CD121187             [                      TC GTTGGCTCAACTTG TCCTGACATGTGTGTGTGTTTAGAAGCTTTCAAAGAATCCCTTAAGTATCATTTACCAG GGTTAAATGAG GATAGTCTCAA GTTGGCACT GAAGGGTATCGCTGGAGA A GATGACCTCCA AACTTAT AATTGGGTTAGG TTTGCCACAACCTATCTCCAACCACAGTGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL CD155464             [                                                                                                                                                                                            TTTGCCACAACCTATCTCCAACCACAGTGTGATTTTGTCTGGGCTGGGAAGGAGA TTGACAAAGCACTTGTTAATTCTACGTATATCAACGGCAGTGAGTTCTCTTTGTCAGATTTGGCTATTTGGACTTTTCTAGAAATCAATCCAGATTGGCACAAACTCAATGAGTCGTACAAAACTGATGGCTCCGTAAAGTCGTTTGTTAATCTTAAACAATACTATGATCGACTTATAACCTTACCATCAGTTCGGAAACTTAAAACAGAAATCTATGAATCACGGCTACAGCCAAGAGGCGTTTCAGTTAACTCAGGGCCACCTAGTAATACTATTGGTAAAACTCATGCGTCTGATATGCTATTTGAAAAGGGAGGAAAGTTCGGTGAACTTCCTGGTGCGAGAGTTGGGGAAGTAGTCGTTCGTTTTCCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CD131811             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                AAACAGAAATCTATGAATCACGGCTACAGCCAAGAGGCGTTTCAGTTAACTCAGAGCCACCTAGTAATACTATTGGTAAAACTCATGCGTCTGATATGCTATTTGAAAAGGGAGGAAAGTTCGGTGAACTTCCTGGTGCGAGAGTTGGGGAAGTAGTCGTTCGTTTTCCTCCGGAAGCCAGTGGATATTTGCATATTGGACATGCCAAAGCAGCGCTTCTAAATCAACACTATAGGGATATTTTCAAAGGTCGTTTGATATTACGTTTTGATGATACTAATCCTGATAAAGAAAAAGAATGCTTTGAAAAGTCGATTCTTTCAGATCTTCCTCGAATTGGTGTCACATGGGATGCTATATCGTCAACATCTGATCATTTTGATGAGATGTTAAAACTGTGTGAACAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CD148972             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             TAGTAATACTATTGGTAAAACTCATGCGTCTGATATGCTATTTGAAAAGGGAGGAAAGTTCGGTGAACTTCCTGGTGCGAGAGTTGGGGAAGTAGTCGTTCGTTTTCCTCCGGAAGCCAGTGGATATTTGCATATTGGACATGCCAAAGCAGCGCTTCTAAATCAACACTATAGGGATATTTTCAAAGGTCGTTTGATATTACGTTTTGATGATACTAATCCTGATAAAGAAAAAGAATGCTTTGAAAAGTCGATTCTTTCAGATCTTCCTCGAATTGGTGTCACATGGGATGCTATATCGTCAACATCTGATCATTNTGATGAGATGTTAAAACTGTGTGAACAACTAATCAAGGAAGGCAAAGCATATGTTGATAACACAGAC                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CD155239             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  TCATGCGTCTGATATGCTATTTGAAAAGGGAGGAAAGTTCGGTGAACTTCCTGGTGCGAGAGTTGGGGAAGTAGTCGTTCGTTTTCCTCCGGAAGCCAGTGGATATTTGCATATTGGACACGCCAAAGCAGCGCTTCTAAATCAACACTATAGGGATATTTTCAAAGGTCGTTTGATATTACGTTTTGATGATACTAATCCTGATAAAGAAAAAGAATGCTTTGAAAAGTCGATTCTTTCAGATCTTCCTCGAATTGGTGTCACATGGGATGCTATATCGTCAACATCTGATCATTTTGATGAGATGTTAAAACTGTGTGAACAACTAATCAAGGAAGGCAAAGCATATGTTGATAACACAGACACGGAAGCTATTCGTGTACAGAGGGAAGCACGCCAAATGTCCGCTTGTAGAGATAATTCTATCGAACAAA                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CD154504             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    GCGCTTCTAAATCAACACTATAGGGATATTTTCAAAGGTCGTTTGATATTACGTTTTGATGATACTAATCCTGATAAAGAAAAAGAATGCTTTGAAAAGTCGATTCTTTCAGATCTTCCTCGAATTGGTGTCACATGGGATGCTATATCGTCAACATCTGATCATTTTGATGAGATGTTAAAACTGTGTGAACAACTAATCAAGGAAGGCAAAGCATATGTTGATAACACAGACACGGAAACTATTCGTGTACAGAGGGAAGCACGCCAAATGTCCGCTTGTAGAGATAATTCTATCGAACAAAATTTGTCTTGGTGGGGAGAAATGAAAAAGGGGACGGAACAAGGACCAAAATGTTGCGTACGTGCTAAAATTGATATGTCTTCTAATAACGGTGCTTTACGTGATCCTACAATATATCGTTGTAAAATAGAACCCCATGTTCGGACAGGTTCTAAATATAAAGTGTATCCATTGTATGATTTTGCTTGCCCAGTAGTGGATAGTATTGAAGGCGTAACCCACGCTTTGCGAACATCTGAATATAATGATAGAAATGAACAGTATGCATGGATATGTAAAAGTCTAGGTATTCAT                                              ]
[+] EMBL CD154669             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    GCGCTTCTAAATCAACACTATAGGGATATTTTCAAAGGTCGTTTGATATTACGTTTTGATGATACTAATCCTGATAAAGAAAAAGAATGCTTTGAAAAGTCGATTCTTTCAGATCTTCCTCGAATTGGTGTCACATGGGATGCTATATCGTCAACATCTGATCATTTTGATGAGATGTTAAAACTGTGTGAACAACTAATCAAGGAAGGCAAAGCATATGTTGATAACACAGACACGGAAACTATTCGTGTACAGAGGGA                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CD154368             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    GCGCTTCTAAATCAACACTATAGGGATATTTTCAAAGGTCGTTTGATATTACGTTTTGATGATACTAATCCTGATAAAGAAAAAGAATGCTTTGAAAAGTCGATTCTTTCAGATCTTCCTCGAATTGGTGTCACATGGGATGCTATATCGTCAACATCTGATCATTTTGATGAGATGTTAAAACTGTGTGAACAACTAATCAAGGAAGGCGAAGCATATGTTGATAACACAGACACGGAAACTATTCGTGTACAGAGGGAAGCACGCCAAATGTCCGCTTGTAGAGATAATTCTATCGAACAAAATTTGTCTTGGTGGGGAGAAATGAAAAAGGGGACGGAACAAGGACTAAAATGTTGCGTACGTGC                                                                                                                                                                                                                                                                                   ]
[+] EMBL CD096244             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GATATTTTCAAAGGTCGTTTGATATTACGTTTTGATGATACTAATCCTGATAAAGAAAAAGAATGCTTTGAAAAGTCGATTCTTTCAGATCTTCCTCGAATTGGTGTCACATGGGATGCTATATCGTCAACATCTGATCATTTTGATGAGATGTTAAAACTGTGTGAACAACTAATCAAGGAAGGCAAAGCATATGTTGATAACACAGACACGGAAACTATTCGTGTACAGAGGGAAGCACGCCAAATGTCCGCTTGTAGAGATAATTCTATCGAACAAAATTTGTCTTGGTGGGGAGAAATGAAAAAGGGGACGGAACAAGGACTAAAATGTTGCGTACGTGCTAAAATTGATATGTCTTCTAATAACGGTGCTTTACGTGATCCTACAATATATCGTTGTAAAATAGAACCCCATGTTCGGACAGGTTCTAAATATAAAGTGTATCCATTGTATGATTTTGCTTGCCCAGTAGTGGATAGTATTGAAGGCGTAACCCACGCTTTGCGAACATCTGAATATAATGATAGAAATGAACAGTATGCATGGATATGTCAAAGTCTAGGTATAC                                                ]
[+] EMBL CD188240             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TGCTTTGAAAAGTCGATTCTTTCAGATCTTCCTCGAATTGGTGTCACATGGGATGCTATATCGTCAACATCTGATCATTTTGATGAGATGTTAAAACTGTGTGAACAACTAATCAAGGAAGGCAAAGCATATGTTGATAACACAGACACGGAAACTATTCGTGTACAGAGGGAAGCACGCCAAATGTCCGCTTGTAGAGATAATTCTATCGAACAAAATTTGTCTTGGTGGGGAGAAATGAAAAAGGGGACGGAACAAGGACTAAAATGTTGCGTACGTGCTAAAATTGATATGTCTTCTAATAACGGTGCTTTACGTGATCCTACAATATATCGTTGTAAAATAGAACCCCATGTTCGGACAGGTTCTAAATATAAAGTGTATCCATTGTATGATTTTGCTTGCCCAGTA                                                                                                                                                 ]
[+] EMBL CD152677             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      CTTCCTGGAATTGGTGTCACATGGGATGCTATATTGTCAACATCTGATCATTTTGATGAGATGTTAAAACTGTGTGAACAACTAATCAAGGAAGGCAAAGCATATGTTGATAACACAGACACGGAAACTATTCGTGCACAGAGGGAAGCACGCCAAATGTCCGCTTGTAGAGATAATTCTATCGAACAAAATTTGTCTTGGTGGGGAGAAATGAAAAAGGGGACGGAACAAGGACTAAAATGTTGCGTACGTGCTAAAATTGATATGTCTTCTAATAACGGTGCTTTACGTGATCCTACAATATATCGTTGTAAAATAGAACCCCATGTTCGGACAGGTTCTAAATATAAAGTGTATCCATTGTATGATTTTGCTTGCCCAGTAGTGGATAGTATTGAAGGCGTAACCCACGCTTTGCGAACATCTGAATATAATGATA                                                                                          ]
[-] EMBL CD191693             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TTGTCTTGGTGGGGAGAAATGAAAAAGGGGACGGAACAAGGACTAAAATGTTGCGTACGTGCTAAAATTGATATGTCTTCTAATAACGGTGCTTTACGTGATCCTACAATATATCGTTGTAAAATAGAACCCCATGTTCGGACAGGTTCTAAATATAAAGTGTATCCATTGTATGATTTTGCTTGCCCAGTAGTGGATAGTATTGAAGGCGTAACCCACGCTTTGCGAACATCTGAATATAATGATAGAAATGAACAGTATGCATGGATATGTAAAAGTCTAGGTATACGTTGTCCAATTGTGATCGACTATAGCCGTCTTGCTCTACAAAATACAG]


>consensus_10749#0 CTCAAGCACATACTCAAGGTCATCGTTGGCTCAACTTGTCCTGACATGTGTGTGTGTTTA GAAGCTTTCAAAGAATCCCTTAAGTATCATTTACCAGGGTTAAATGAGGATAGTCTCAAG TTGGCACTGAAGGGTATCGCTGGAGAAGATGACCTCCAAACTTATAATTGGGTTAGGTTT GCCACAACCTATCTCCAACCACAGTGTGATTTTGTCTGGGCTGGGAAGGAGATTGACAAA GCACTTGTTAATTCTACGTATATCAACGGCAGTGAGTTCTCTTTGTCAGATTTGGCTATT TGGACTTTTCTAGAAATCAATCCAGATTGGCACAAACTCAATGAGTCGTACAAAACTGAT GGCTCCGTAAAGTCGTTTGTTAATCTTAAACAATACTATGATCGACTTATAACCTTACCA TCAGTTCGGAAACTTAAAACAGAAATCTATGAATCACGGCTACAGCCAAGAGGCGTTTCA GTTAACTCAGGGCCACCTAGTAATACTATTGGTAAAACTCATGCGTCTGATATGCTATTT GAAAAGGGAGGAAAGTTCGGTGAACTTCCTGGTGCGAGAGTTGGGGAAGTAGTCGTTCGT TTTCCTCCGGAAGCCAGTGGATATTTGCATATTGGACATGCCAAAGCAGCGCTTCTAAAT CAACACTATAGGGATATTTTCAAAGGTCGTTTGATATTACGTTTTGATGATACTAATCCT GATAAAGAAAAAGAATGCTTTGAAAAGTCGATTCTTTCAGATCTTCCTCGAATTGGTGTC ACATGGGATGCTATATCGTCAACATCTGATCATTTTGATGAGATGTTAAAACTGTGTGAA CAACTAATCAAGGAAGGCAAAGCATATGTTGATAACACAGACACGGAAACTATTCGTGTA CAGAGGGAAGCACGCCAAATGTCCGCTTGTAGAGATAATTCTATCGAACAAAATTTGTCT TGGTGGGGAGAAATGAAAAAGGGGACGGAACAAGGACTAAAATGTTGCGTACGTGCTAAA ATTGATATGTCTTCTAATAACGGTGCTTTACGTGATCCTACAATATATCGTTGTAAAATA GAACCCCATGTTCGGACAGGTTCTAAATATAAAGTGTATCCATTGTATGATTTTGCTTGC CCAGTAGTGGATAGTATTGAAGGCGTAACCCACGCTTTGCGAACATCTGAATATAATGAT AGAAATGAACAGTATGCATGGATATGTAAAAGTCTAGGTATACATTGTCCAATTGTGATC GACTATAGCCGTCTTGCTCTACAAAATACAG



consensusID : consensus_10749#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 442
fasta sequence
                              [CATCGTTGGCTCAACTTGTCCTGACATGTGTGTGTGTTTAGAAGCTTTCAAAGAATCCCTTAAGTATCATTTACCAGGGTTAAATGAGGATAGTTGGCACTGAAGGGTATCGCTGGAGAAGATGACCTCCAAGTTTGCCAC-AACCTATCTCCAACCACAGTGTGATTTTGTCTGGGCTGGGAAGGAGATTGACAAAGCACTTGTTAATTCTACGTATATCAACGGCAGTGAGTTCTCTTTGTCAGATCTGGCTATTTGGACTTTTCTAG-AAATCAATCCAG-ATTGGCACAAACTCAGTGAGTCGTACAAAACTGATGGCTCCGTAAAGTCGTTTGTTAATCTTAAACAATACTATGATCGACTTATAACCTTACCATCAGTTCGGAAACTTAAAACAGAAATCTATGAATCACGGCTACAGCCAAGAGGCGTTTCAGTTAAC]

[+] EMBL CD110966             [CATCGTTGGCTCTATTTGTCCTGACATGTGTGTGTGTTTAGAAGCTTTCAAAGAATCCCTTAAGTATCATTTACCAGGCTTAAATGAGGATAGTTGGCACTGAAGGGTATCGCTGGAGAAGATGACCTCCAAGTTTGCCACTAACCTATCTCCAACCACAGTGTGATTTTGTCTGGACTGGGAAGGAGCTTGACAAAGCACTTGTTAATTCTACGTATATCAACGGCAGTGAGTTCTCTTTGTCAGATCTGGCTATTTGGACTTTTCTAG AAATCAATCCAG ATTGGCACAAACTCAGTGAGTCGTACAAAACTGATGGCTCCGTAAAGTCGTTTGTTAATCTTAAACAATACTATGATCGACTTATAACCTTACCATCAGTTCGGAAACTTAAAACAGAAATCTATGAATCACGGCTACCGCCAAGAGGCGTTTCAGTTAA ]
[+] EMBL CD098387             [CATCGTTGGCTCAACTTGTCCTGACATGTGTGTGTGTTTAGAAGCTTTCAAAGAATCCCTTAAGTATCATTTACCAGGGTTAAATGAGGATAGTTGGCACTGAAGGGTATCGCTGGAGAAGATGACCTCCAAGTTTGCCAC AACCTATCTCCAACCACAGTGTGATTTTGTCTGGGCTGAGAAGGAGATTGACAAAGCACTTGTTAATTCTACGTATATCAACGGCAGTGAGTTCTCTTTGTCAGATTTGGCTATTTGGACTTTTCTAG AAATCAATCCAG ATTGGCACAAACTCAATGAGTCGTACAAAACTGATGGCTCCGTAAAGTCGTTTGTTAATCTTAAACAATACTATGATCGACTTATAACCTTACCATCAGTTCGGAAACTTAAAACAGAAATCTATGAATCACGGCTACAGCCAAGAGGCGTTTCAGTTAA ]
[-] EMBL CD111539             [ ATCGTGGGCTCAACTTGTCCTGACATGTGTGTGTGTTTTGAAGCTTTCAAAGAATCCCTTAAGTATCATTTACCAGGGTTAAATGAGGATAGTTGGCACTGAAGGGTATCGCTGGAGAAGATGACCTCCAAGTTTGCCAC AACCTATCTCCAACCACAGTGTGATTTTGTCTGGGCTGGGAAGGAGATTGACAAAGCACTTGTTAATTCTACGTATATCAACGGCAGTGAGTTCTCTTCGTCAGATTTGGCTATTTGGACTTTTCTAG AAATCAATCCAG ATTGGCACAAACTCAATGAGTCGTACAAAACTGATGGCTCCGTAAAGTCGTTTGTTAATCTTAAACAATACTATGATCGACTTATAACCTTACCATCAGTTCGGAAACTTAAAACAGAAATCTATGAATCACGGCTACAGCCAAGAGGCGTTTCAGTTAAC]
[+] EMBL CD110856             [                                                                                                                                                                                                                                                   aatccCTGGCTATTTGGACTTTTCTAGCAAATCAATCCAGAATTGGCACAAACTCAGTGAGTCGTACAAAACTGATGGCTCCGTAAAGTCGTTTGTTAATCTTAAACAATACTATGATCGACTTATAACCTTACCATCAGTTCGGAAACTTAAAACAGAAATCTATGAATCACGGCTACAGCCCAGAGGCGTTTCAGTTAA ]


>consensus_10749#1 CATCGTTGGCTCAACTTGTCCTGACATGTGTGTGTGTTTAGAAGCTTTCAAAGAATCCCT TAAGTATCATTTACCAGGGTTAAATGAGGATAGTTGGCACTGAAGGGTATCGCTGGAGAA GATGACCTCCAAGTTTGCCACAACCTATCTCCAACCACAGTGTGATTTTGTCTGGGCTGG GAAGGAGATTGACAAAGCACTTGTTAATTCTACGTATATCAACGGCAGTGAGTTCTCTTT GTCAGATCTGGCTATTTGGACTTTTCTAGAAATCAATCCAGATTGGCACAAACTCAGTGA GTCGTACAAAACTGATGGCTCCGTAAAGTCGTTTGTTAATCTTAAACAATACTATGATCG ACTTATAACCTTACCATCAGTTCGGAAACTTAAAACAGAAATCTATGAATCACGGCTACA GCCAAGAGGCGTTTCAGTTAAC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10749#0      CTCAAGCACATACTCAAGGTCATCGTTGGCTCAACTTGTCCTGACATGTGTGTGTGTTTA 60
consensus_10749#1      --------------------CATCGTTGGCTCAACTTGTCCTGACATGTGTGTGTGTTTA 40
                                           ****************************************

consensus_10749#0      GAAGCTTTCAAAGAATCCCTTAAGTATCATTTACCAGGGTTAAATGAGGATAGTCTCAAG 120
consensus_10749#1      GAAGCTTTCAAAGAATCCCTTAAGTATCATTTACCAGGGTTAAATGAGGATAG------- 93
                       *****************************************************       

consensus_10749#0      TTGGCACTGAAGGGTATCGCTGGAGAAGATGACCTCCAAACTTATAATTGGGTTAGGTTT 180
consensus_10749#1      TTGGCACTGAAGGGTATCGCTGGAGAAGATGACCTCCAA-----------------GTTT 136
                       ***************************************                 ****

consensus_10749#0      GCCACAACCTATCTCCAACCACAGTGTGATTTTGTCTGGGCTGGGAAGGAGATTGACAAA 240
consensus_10749#1      GCCACAACCTATCTCCAACCACAGTGTGATTTTGTCTGGGCTGGGAAGGAGATTGACAAA 196
                       ************************************************************

consensus_10749#0      GCACTTGTTAATTCTACGTATATCAACGGCAGTGAGTTCTCTTTGTCAGATTTGGCTATT 300
consensus_10749#1      GCACTTGTTAATTCTACGTATATCAACGGCAGTGAGTTCTCTTTGTCAGATCTGGCTATT 256
                       *************************************************** ********

consensus_10749#0      TGGACTTTTCTAGAAATCAATCCAGATTGGCACAAACTCAATGAGTCGTACAAAACTGAT 360
consensus_10749#1      TGGACTTTTCTAGAAATCAATCCAGATTGGCACAAACTCAGTGAGTCGTACAAAACTGAT 316
                       **************************************** *******************

consensus_10749#0      GGCTCCGTAAAGTCGTTTGTTAATCTTAAACAATACTATGATCGACTTATAACCTTACCA 420
consensus_10749#1      GGCTCCGTAAAGTCGTTTGTTAATCTTAAACAATACTATGATCGACTTATAACCTTACCA 376
                       ************************************************************

consensus_10749#0      TCAGTTCGGAAACTTAAAACAGAAATCTATGAATCACGGCTACAGCCAAGAGGCGTTTCA 480
consensus_10749#1      TCAGTTCGGAAACTTAAAACAGAAATCTATGAATCACGGCTACAGCCAAGAGGCGTTTCA 436
                       ************************************************************

consensus_10749#0      GTTAACTCAGGGCCACCTAGTAATACTATTGGTAAAACTCATGCGTCTGATATGCTATTT 540
consensus_10749#1      GTTAAC------------------------------------------------------ 442
                       ******                                                      

consensus_10749#0      GAAAAGGGAGGAAAGTTCGGTGAACTTCCTGGTGCGAGAGTTGGGGAAGTAGTCGTTCGT 600
consensus_10749#1      ------------------------------------------------------------
                                                                                   

consensus_10749#0      TTTCCTCCGGAAGCCAGTGGATATTTGCATATTGGACATGCCAAAGCAGCGCTTCTAAAT 660
consensus_10749#1      ------------------------------------------------------------
                                                                                   

consensus_10749#0      CAACACTATAGGGATATTTTCAAAGGTCGTTTGATATTACGTTTTGATGATACTAATCCT 720
consensus_10749#1      ------------------------------------------------------------
                                                                                   

consensus_10749#0      GATAAAGAAAAAGAATGCTTTGAAAAGTCGATTCTTTCAGATCTTCCTCGAATTGGTGTC 780
consensus_10749#1      ------------------------------------------------------------
                                                                                   

consensus_10749#0      ACATGGGATGCTATATCGTCAACATCTGATCATTTTGATGAGATGTTAAAACTGTGTGAA 840
consensus_10749#1      ------------------------------------------------------------
                                                                                   

consensus_10749#0      CAACTAATCAAGGAAGGCAAAGCATATGTTGATAACACAGACACGGAAACTATTCGTGTA 900
consensus_10749#1      ------------------------------------------------------------
                                                                                   

consensus_10749#0      CAGAGGGAAGCACGCCAAATGTCCGCTTGTAGAGATAATTCTATCGAACAAAATTTGTCT 960
consensus_10749#1      ------------------------------------------------------------
                                                                                   

consensus_10749#0      TGGTGGGGAGAAATGAAAAAGGGGACGGAACAAGGACTAAAATGTTGCGTACGTGCTAAA 1020
consensus_10749#1      ------------------------------------------------------------
                                                                                   

consensus_10749#0      ATTGATATGTCTTCTAATAACGGTGCTTTACGTGATCCTACAATATATCGTTGTAAAATA 1080
consensus_10749#1      ------------------------------------------------------------
                                                                                   

consensus_10749#0      GAACCCCATGTTCGGACAGGTTCTAAATATAAAGTGTATCCATTGTATGATTTTGCTTGC 1140
consensus_10749#1      ------------------------------------------------------------
                                                                                   

consensus_10749#0      CCAGTAGTGGATAGTATTGAAGGCGTAACCCACGCTTTGCGAACATCTGAATATAATGAT 1200
consensus_10749#1      ------------------------------------------------------------
                                                                                   

consensus_10749#0      AGAAATGAACAGTATGCATGGATATGTAAAAGTCTAGGTATACATTGTCCAATTGTGATC 1260
consensus_10749#1      ------------------------------------------------------------
                                                                                   

consensus_10749#0      GACTATAGCCGTCTTGCTCTACAAAATACAG 1291
consensus_10749#1      -------------------------------
                                                      




Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)