These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1082#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 170 fasta sequence [TCTTGTCGCCGCCACCGCCGCCGCCACAAAAACTATACTCCCGTCTAGTCAGTACACTCCAATTCAAAAATACACTCGCTCACTCACATCTCTCGATACAACTACACCTCTTCACAGTCCACTCTCTCCATCGCCAAACCAACAGAAGTGACGAGCTACACCCCATCCAC] [+] EMBL CD157819 [TCTTGTCGCCGCCACCGCCGCCGCCACAAAAACTATACTCCCGTCTAGTCAGTACACTCCAATTCAAAAATACACTCGCTCACTCACATCTCTCGATACAACTACACCTCTTCACAGTCCACTCTCTCCATCGCCAAACCAACAGAAGTGACGAGCTACACCCCATCCAC] consensusID : consensus_1082#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 85 fasta sequence [TCGATACAACTACACCTCTTCACAGTCCACTCTCTCCACCGCCGCCGCCACAAAAACTATACTCCCGTCTAGTCAGTACACTCCA] [+] EMBL CD129242 [TCGATACAACTACACCTCTTCACAGTCCACTCTCTCCACCGCCGCCGCCACAAAAACTATACTCCCGTCTAGTCAGTACACTCCA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_1082#0 TCTTGTCGCCGCCACCGCCGCCGCCACAAAAACTATACTCCCGTCTAGTCAGTACACTCC 60 consensus_1082#1 ------------------------------------------------------------ consensus_1082#0 AATTCAAAAATACACTCGCTCACTCACATCTCTCGATACAACTACACCTCTTCACAGTCC 120 consensus_1082#1 --------------------------------TCGATACAACTACACCTCTTCACAGTCC 28 **************************** consensus_1082#0 ACTCTCTCCATCGCCAAACCAACAGAAGTGACGAGC---TACACCCCATCCAC---- 170 consensus_1082#1 ACTCTCTCCACCGCCGCCGCCACAAAAACTATACTCCCGTCTAGTCAGTACACTCCA 85 ********** **** * *** ** * * * * * * *** |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||