These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10822#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1001 fasta sequence [GAGCCATATTCGGCCGAGGTTACTTTGGATTTTTTTAGTAGTTATCCCGTAAGAATCTTAAAAATATGAAGTCAATGAAAATGAGCAATGGTCATTCTATTCCTGTTGTCGGTCTTGGTACATGGAATAGTCCATCAGATGTAGTTGGTGCAGCTGTACAAAAAGCTTTAGAAGTTGGTTATCGTCATTTAGATTGTGCTTATATTTATAAAAATGAAATTGAAGTTGGTATAGCTTTAGAAGAGTCAATGAAACTTTTAAAATTGAACAGAGATGAATTATTTATCACTTCTAAATTATGGCATACAGGACATGACCCAGAAAATGTCAAGAGCTTCTGTGAAATGTCGCTAAGAAATTTACGGTTAAACTATTTGGACTTGTATTTGATACATTTCCCAGTATCTTTCAAGGCTGGTACTTCTGATTTTCCTACAGATGAGAATAATAACCCAATCTTTGATACAGTTCCACTTGAAGAAACATGGAAGGCGATGGAAAACCTGGTCGACGAAGGTTTAGTCAAATCGATTGGTTTATCAAATTTCAATAGACGACAAATTGAAAATATTCTTAAACATTGTCGTATTAAACCAGTTAATTTGCAAATTGAAGTTCATGCCAATTTTCCTAACACAAAATTAGTTGAATATGCTCAGTCAGTCGGTTTGACTGTGACTGCTTATGCCCCGCTTGGTTCACCTGCTCGTTCACCTTTATCAGCANATTTATTAACTGAACCTTGGGTAATTTCAATTGCACAAAAGCACAATAGAACACCAGCACANATTTTGCTACGTTACTTACTTCAACGTGATATAACCGTTGTACCANAATCAATTACTAATGATAGAAATATAGAANATTTTCAGTTTATCAGCANATTTATTAACTGAACCTTGGNGTATTTCATTGCACAAAGCACATAGACACCGCACNAATTTGCTCGTTACTACTTCACGTGATTACCGTTGACANATCATACTATGATGATATAGAAA] [+] EMBL CD081715 [GAGCCATATTCGGCCGAGGTTACTTTGGATTTTTTTAGTAGTTATCCCGTAAGAATCTTAAAAATATGAAGTCAATGAAAATGAGCAATGGTCATTCTATTCCTGTTGTCGGTCTTGGTACATGGAATAGTCCATCAGATGTAGTTGGTGCAGCTGTACAAAAAGCTTTAGAAGTTGGTTATCGTCATTTAGATTGTGCTTATATTTATAAAAATGAAATTGAAGTTGGTATAGCTTTAGAAGAGTCAATGAAACTTTTAAAATTGAACAGAGATGAATTATTTATCACTTCTAAATTATGGCATACAGGACATGACCCAGAAAATGTCAAGAGCTTCTGTGAAATGTCGCTAAGAAATTTACGGTTAAACTATTTGGACTTGTATTTGATACATTTCCCAGTATCTTTCAAGGCTGGTACTTCTGATTTTCCTACAGATGAGAATAATAACCCAATCTTTGATACAGTTCCACTTGAAGAAACATGGAAGGCGATGGAAAACCTGGTCGACGAAGGTTTAGTCAAATCGATTGGTTTATCAAATTTCAATAGACGACAAATTGAAAATATTCTTAAACATTGTCGTATTAAACCAGTTAATTTGCAAATTGAAGTTCATGCCAATTTTCCTAACACAAAATTAGTTGAATATGCTCAGTCAGTCGGTTTGACTGTGACTGCTTATGCCCCGCTTGGTTCACCTGCTCGTTCACCTTTATCAGCANATTTATTAACTGAACCTTGGGTAATTTCAATTGCACAAAAGCACAATAGAACACCAGCACANATTTTGCTACGTTACTTACTTCAACGTGATATAACCGTTGTACCANAATCAATTACTAATGATAGAAATATAGAANATTTTCAGTTTATCAGCANATTTATTAACTGAACCTTGGNGTATTTCATTGCACAAAGCACATAGACACCGCACNAATTTGCTCGTTACTACTTCACGTGATTACCGTTGACANATCATACTATGATGATATAGAAA] consensusID : consensus_10822#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 18 consensus length = 958 fasta sequence [AAGCTCTAGAAGTTGGTTATCGACATTTGGACTGTGCTTATGTCTACAGAAATGAAGCGGAAATAGGTGGAGCGCTGGAATGTTCATTAAAGAGTCTAAACTTAAAAAGAGAGGACGTTTTTGTTACTTCTAAGCTGTGGAATACTTTTTTCCGCCCTGAGCATGTCAGGAAAGCCTGTGAAGAAACTTTGAAGAATTTGCGTCTTAAATACCTTGATTTGTACTTAATTCATTGGCCTGTTCCATTCCAATATGGTGAATGTCTTTTTCCCACTGATTCGAACGGGAATTTCTGTGTAGATGAAGTACCAC-ATGAGGAAACTTGGAAGGAAATGGAAAAATTGGTTGATGATGGTTTAGTTAAATCTATT-GGTTTATCAAATTTCAACAAACGTCAAATTGAAAATATTCTTAAACATTGTCGTATTAAACCAGCTAATTTACAAATTGAAATTCATGCTAATTTTCCTAATATACAATTAGTTGAATATGCACAATCGATTGGTTTAACTGTAACTGCTTATGCTCCACTTGGTTCACCTGCTGCTTCACCAGGAAGAGTTGATTTACTCATGGAACCTTGGGTTTTACAAATTGCTAAACATCACGGTAAAACACCGGCTCAAGTTCTCTTGCGTTATTTAATTCAAAGAAACTTGATAATAGTTCCAAAGTCTGTAACACCGAAACGAATTGAAGAAAACTTTGGGGTATTTGATTTCCAACTTTCAAAAGAGGAAATGCATGAATTGAATACAAAAGGTTTGAATGAACGTCAATTCAAATTGTTGAAAATGGCTAATCATTCCGAGTATCCATTCAAAGATGCGTATTGAAGATTCAATGAATGGAACGTCATTGAAATGAAGGACTTAATTTCATCATACTTTTAAACAAATTCTCTTGGTGTGCTGCTTTT-TATTATTAAATAAAATCTAAATCGCTTCAAAAAAAGTTA] [+] EMBL CD186376 [AAGCTCTAGAAGTTGGTTATCGACATTTGGACTGTGCTTATGTCTACAGAAATGAAGCGGAAATAGGTGGAGCGCTGGAATGTTCATTAAAGAGTCTAAACTTAAAAAGAGAGGACGTTTTTGTTACTTCTAAGCTGTGGAATACTTTTTTCCGCCCTGAGCATGTCAGGAAAGCCTGTGAAGAAACTCTGAAGAATTTGCGTCTTAAATACCTTGATTTGTACTTAATTCATTGGCCTGTTCCATTCCAATATGGTGAATGTCTTTTTCCCACTGATTCGAACGGGAATTTCTGTGTAGATAAAGTACCAC ATGAGGAAACTTGGAAGGAAATGGAAAAATTGGTTGATGATGGT ] [+] EMBL CD134787 [ TACAGAAATGAAGCGGAAATAGGTGGAGCGCTGGAATGTTCATTAAAGAGTCTAAACTTAAAAAGAGAGGACGTTTTTGTTACTTCTAAGCTGTGGAATACTTTTTTCCGCCCTGAGCATGTCAGGAAAGCCTGTGAAGAAACTTTGAAGAATTTGCGTCTTAAATACCTTGATTTGTACTTAATTCATTGGCCTGTTCCATTCCAATATGGTGAATGTCTTTTTCCCACTGATTCGAACGGGAATTTCTGTGTAGATGAAGTACCAC ATGAGGAAACTTGGAAGGAAATGGAAAAATTGGTTGATGATGGTTTAGTTAAATCTATT GGTTTATCA ] [+] EMBL CD155064 [ ATAGGTGGAGCGCTGGAATGTTCATTAAAGAGTCTAAACTTAAAAAGAGAGGACGTTTTTGTTACTTCTAAGCTGTGGAATACTTTTTTCCGCCCTGAGCATGTCAGGAAAGCCTGTGAAGAAACTTTGAAGAATTTGCGTCTTAAATACCTTGATTTGTACTTAATTCATTGGCCTGTTCCATTCCAATATGGTGAATGTCTTTTTCCCACTGATTCGAACGGGAATTTCTGTGTAGATGAAGTACCAC ATGAGGAAACTTGGAAGGAAATGGAAAAATTGGTTGATGATGGTTTAGTTAAATCTATT GGTTTATCAAATTTCAACAAACGTCAAATTGAAAATATTCTTAAACATTGTCGTATTAAACCAGCTAATTTACAAATTGAAATTCATGCTAATTTTCCTAATATACAATTAGTTGAATATGCACAATCGATTGGTTTAACTGTAACTGCTTATGCTCCACTTGGTTCACCTGCTGCTTCACCAGGAAGAGTTGATTTA ] [+] EMBL CD147152 [ GCTGGAATGTTCATTAAAGAGTCTAAACTTAAAAAGAGAGGACGTTTTTGTTACTTCTAAGCTGTGGAATACTTTTTTCCGCCCTGAGCATGTCAGGAAAGCCTGTGAAGAAACTTTGAAGAATTTGCGTCTTAAATACCTTGATTTGTACTTAATTCATTGGCCTGTTCCATTCCAATATGGTGAATGCCTTTTTCCCACTGATTCGAACGGGAATTTCTGTGTAGATGAAGTACCAC ATGAGGAAACTTGGAAGGAAATGGAAAAATTGGTTGATGATGGTTTAGTTAAATCTATT GGTTTATCAAATTTCAACAAACGTCAAATTGAAAATATTCTTAAACATTGTCGTATTAAACCAGCTAATTTACAAATTGAAATTCATGCTAATTTTCCTAATATACAATTAGTTGAATATGCACAATCGATTGGTTTAACTGTAACTGCTTATGCTCCACTTGGTCCACCTGCTGCTTCACCAGGAAGAGTTGATTTACTCATGGAACCTTGGGTTTTACAAATTGCTAAACATCACGG ] [+] EMBL CD147233 [ GCTGGAATGTTCATTAAAGAGTCTAAACTTAAAAAGAGAGGACGTTTTTGTTACTTCTAAGCTGTGGAATACTTTTTTCCGCCCTGAGCATGTCAGGAGAGCCTGTGAAGAAACTTTGAAGAATTTGCGTCTTAAATACCTTGATTTGTACTTAATTCATTGGCCTGTTCCATTCCAATATGGTGAATGTCTTTTTCCCACTGATTCGAACGGGAATTTCTGTGTAGATGAAGTACCAC ATGAGGAAACTTGGAAGGAAATGGAAAAATTGGTTGATGATGGTTTAGTTAAATCTATT GGTTTATCAAATTTCAACAAACGTCAAATTGAAAATATTCTTAAACATTGTCGTATTAAACCAGCTAATTTACAAATTGAAATTCATGCTAATTTTCCTAATATACAATTAGTTGAATATGCACAATCGATTGGTTTAACTGTAACTGCTTATGCTCCACTTGGTTCACCTGCTGCTTCACCAGGAAGA ] [+] EMBL CD145996 [ TAAAGAGTCTAAACTTAAAAAGAGAGGACGTTTTTGTTACTTCTAAGCTGTGGAATACTTTTTTCCGCCCTGAGCATGTCAGGAAAGCCTGTGAAGAAACTTTGAAGAATTTGCGTCTTAAATACCTTGATTTGTACTTAATTCATTGGCCTGTTCCATTCCAATATGGTGAATGTCTTTTTCCCACTGATTCGAACGGGAATTTCTGTGTAGATGAAGTACCAC ATGAGGAAACTTGGAAGGAAATGGAAAAATTGGTTGATGATGGTTTAGTTAAATCTATT GGTTTATCAAATTTCAACAAACGTCAAATTGAAAATATTCTTAAACATTGTCGTATTAAACCAGCTAATTTACAAATTGAAATTCATGCTAATTTTCCTAATATACAATTAGTTGAATATGCACAATCGATTGGTTTAACTGTAACTGCTTATGCTCCACTTGGTTCACCTGCTGCTTCACCAGGAAGAGTTGATTTACTCATG ] [+] EMBL CD198588 [ GAGTCTAAACTTAAAAAGAGAGGACGTTTTTGTTACTTCTAAGCTGTGGAATACTTTTTTCCGCCCTGAGCATGTCAGGAAAGCCTGTGAAGAAACTTTGAAGAATTTGCGTCTTAAATACCTTGATTTGTACTTAATTCATTGGCCTGTTCCATTCCAATATGGTGAATGTCTTTTTCCCACTGATTCGAACGGGAATTTCTGTGTAGATGAAGTACCAC ATGAGGAAACTTGGAAGGAAATGGAAAAATTGGTTGATGATGGTTTAGTTAAATCTATT GGTTTATCAAATTTCAACAAACGTCTAATTGAAAATATTCTTAAACATTGTCGTAT ] [-] EMBL CD191144 [ AGGACGTTTTTGTTACTTCTAAGCTGTGGAATACTTTTTTCCGCCCTGAGCATGTCAGGAAAGCCTGTGAAGAAACTTTGAAGAATTTGCGTCTTAAATACCTTGATTTGTACTTAATTCATTGGCCTGTTCCATTCCAATATGGTGAATGTCTTTTTCCCACTGATTCGAACGGGAATTTCTGTGTAGATGAA ] [+] EMBL CD150097 [ CTGTGAAGAAACTTTGAAGAATTTGCGTCTTAAATACCTTGATTTGTACTTAATTCATTGGCCTGTTCCATTCCAATATGGTGAATGTCTTTTTCCCACTGATTCGAACGGGAATTTCTGTGTAGATGAAGT ] [-] EMBL CD126095 [ AACTTTGAAGAATTTGCGTCTTAAATACCTTGATTTGTACTTAATTCATTGGCCTGTTCCATTCCAATATGGTGAATGTCTTTTTCCCACTGATTCGAACGGGAATTTCTGTGTAGATGAAGTACCAC ATGAGGAAACTTGGAAGGAAGTGGAAAAATTGGTTGATGATGGTTTAGTTAAATCTATT GGTTTATCAAATTACAACAAACGTCAAATTGAAAATATTCTTAAACATTGTCGTATTAAACCAGCTAATTTACAAATTGAAATTCATGCTAATTTTCCTAATATACAATTAGTTGAATATGCACAATCGATTGGTTact ] [-] EMBL CD064937 [ GTCTTTTTCCCACTGATTCGAACGGGAATTTCTGTGTAGATGAAGTACCAC ATGAGGAAACTTGGAAGGAAATGGAAAAATTGGTTGATGATGGTTTAGTTAAATCTATT GGTTTATCAAATTTCAACAAACGTCAAATTGAAAATATTCTTAAACATTGTCGTATTAAACCAGCTAATTTACAAATTGAAATTCATGCTAATTTTCCTAATATACAATTAGTTGAATATGCACAATCGATTGGTTTAACTGTAACTGCTTATGCTCCACTTGGTTCACCTGCTGCTTCACCAGGAAGAGTTGATTTACTCATGGAACCTTGGGTTTTACAAATTGCTAAACATCACGGTAAAACACCGGCTCAAGTTCTCTTGCGTTATTTAATTCAAAGAAACTTGATAATAGTTCCAAAGTCTGTAACACCGAAACGAATTGAAGAAAACTTTGGGGTATTTGATTTCCAACTTTCAAAAGAGGAAATGCATGAATTGAATACAAAAGGTTTGAATGAACGTCAA ] [+] EMBL CD079261 [ agaattcggCACGAGGAGGAAACTTGGAAGGAAATGGAAAAATTGGTTGATGATGGTTTAGTTAAATCTATT GGTTTATCAAATTTCAACAAACGTCAAATTGAAAATATTCTTAAACATTGTCGTATTAAACCAGCTAATTTACAAATTGAAATTCATGCTAATTTTCCTAATATACAATTAGTTGAATATGCACAATCGATTGGTTTAACTGTAACTGCTTATGCTCCACTTGGTTCACCTGCTGCTTCACCAGGAAGAGTTGATTTACTCATGGAACCTTGGGTTTTACAAATTGCTAAACATCACGGTAAAACACCGGCTCAAGTTCTCTTGCGTTATTTAATTCAAAGAAACTTGATAATAGTTCCAAAGTCTGTAACACCGAAACGAATTGAAGAAAACTTTGGGGTATTTGATTTCCAACTTTCAAAAGAGGAAATGCATGAATTGAATACAAAAGGTTTGAATGAACGTCAATTCATATTGTTGAAAATGGCTAATCATTCCGAGTATCCATTCAAAGATGCGTATTGAAGA TCAATGAATGGAACGT ATTGATATG AGGACTTAA TTCATCATATTTTAAAACAA TCTCTT GTGTGCTGCTTTTATATTAATACAT ] [+] EMBL CD081774 [ cggcaccagCTTGGAA GAAATGG ATAATTGGTTGATGATGGTTTAGTTAAATCTATTGGGTTTATCAAATTTCAACAAACGTCAAATTGAAAATATTCTTAAACATTGTCGTATTAAACCAGCTAATTTACAAATTGAAATTCATGCTAATTTTCCTAATATACAATTAGTTGAATATGCACAATCGATTGGTTTAACTGTAACTGCTTATGCTCCACTTGGTTCACCTGCTGCTTCACCAGGAAGAGTTGATTTACTCATGGAACCTTGGGTTTTACAAATTGCTAAACATCACGGTAAAACACCGGCTCAAGTTCTCTTGCGTTATTTAATTCAAAGAAACTTGATAATAGTTCCAAAGTCTGTAACACCGAAACGAATTGAAGAAAACTTTGGGGTATTTGATTTCCAACTTTCAAAAGAGGAAATGCATGAATTGAATACAAAAGGTTTGAATGAACGTCAATTCAAATTGTTGAAAATGGCTAATCATTCCGAGTATCCATTCAAAGATGCGTATTGAAGATTCAATGAATGGAACGTCATTGAAATGAAGGACTTAATTTCATCATACTTTTAAACAAATTCTCTTGGTGTGCTGCTTTT TATTATTAAATAAAATCT ] [-] EMBL CD075505 [ TTGGAAGGAAATGGAAAAATTGGTTGATGATGGTTTAGTTAAATCTATT GGTTTATCAAATTTCAACAAACGTCAAATTGAAAATATTCTTAAACATTGTCGTATTAAACCAGCTAATTTACAAATTGAAATTCATGCTAATTTTCCTAATATACAATTAGTTGAATATGCACAATCGATTGGTTTAACTGTAACTGCTTATGCTCCACTTGGTTCACCTGCTGCTTCACCAGGAAGAGTTGATTTACTCATGGAACCTTGGGTTTTACAAATTGCTAAACATCACGGTAAAACACCGGCTCAAGTTCTCTTGCGTTATTTAATTCAAAGAAACTTGATAATAGTTCCAAAGTCTGTAACACCGAAACGAATTGAAGAAAACTTTGGGGTATTTGATTTCCAACTTTCAAAAGAGGAAATGCATGAATTGAATACAAAAGGTTTGAATGAACGTCAATTCAAATTGTTGAAAATGGCTAATCATTCCGAGTATCCATTCAAAGATGCGTATTGAAGATTCAATGAATGGAACGTCATTGAAATGAAGGACTTAATTTCATCATACTTTTAAACAAATTCTCTTGGTGTGCTGCTTTT TAGGATTAAATAAAATCTAAATCGCTTCAAAAA ] [+] EMBL CD079523 [ ccAAAATTTGG CACGAGGGTCTAGTTAAATATATT GGTTTATCAAATTTCAACAAACGTCAAATTGAAAATATTCTTAAACATTGTCGTATTAAACCAGCTAATTTACAAATTGAAATTCATGCTAATTTTCCTAATATACAATTAGTTGAATATGCACAATCGATTGGTTTAACTGTAACTGCTTATGCTCCACTTGGTTCACCTGCTGCTTCACCAGGAAGAGTTGATTTACTCATGGAACCTTGGGTTTTACAAATTGCTAAACATCACGGTAAAACACCGGCTCAAGTTCTCTTGCGTTATTTAATTCAAAGAAACTTGATAATAGTTCCAAAGTCTGTAACACCGAAACGAATTGAAGAAAACTTTGGGGTATTTGATTTCCAACTTTCAAAAGAGGAAATGCATGAATTGAATACAAAAGGTTTGAATGAACGTCAATTCAAATTGTTGAAAATGGCTAATCATTCCGAGTATCCATTCAAAGATGCGTATTGAAGATTCAATGAATGGAACGTCATTGAAATGAAGGACTTAATTTCATCATACTTTTAAACAAATTCTCTTGGTGTGCTGCTTTT TATTATTAAATAAAATCT ] [-] EMBL CD073789 [ TTTAGTTAAATCTATT GGTTTATCAAATTTCAACAAACGTCAAATTGAAAATATTCTTAAACATTGTCGTATTAAACCAGCTAATTTACAAATTGAAATTCATGCTAATTTTCCTAATATACAATTAGTTGAATATGCACAATCGATTGGTTTAACTGTAACTGCTTATGCTCCACTTGGTTCACCTGCTGCTTCACCAGGAAGAGTTGATTTACTCATGGAACCTTGGGTTTTACAAATTGCTAAACATCACGGTAAAACACCGGCTCAAGTTCTCTTGCGTTATTTAATTCAAAGAAACTTGATAATAGTTCCAAAGTCTGTAACACCGAAACGAATTGAAGAAAACTTTGGGGTATTTGATTTCCAACTTTCAAAAGAGGAAATGCATGAATTGAATACAAAAGGTTTGAATGAACGTCAATTCAAATTGTTGAAAATGGCTAATCATTCCGAGTATCCATTCAAAGATGCGTATTGAAGATTCAATGAATGGAACGTCATTGAAATGAAGGACTTAATTTCATCATACTTTTAAACAAATTCTCGTGGTGTGCTGCTTTT TATAAATAAATAAAATCTAACTCGATTCAAAAAAAGTTA] [+] EMBL AW497772 [ TATACAATTAGTTGAATATGCACAATCGATTGGTTTAACTGTAACTGCTTATGCTCCACTTGGTTCACCTGCTGCTTCACCAGGAAGAGTTGATTTACTCATGGAACCTTGGGTTTTACAAATTGCTAAACATCACGGTAAAACACCGGCTCAAGTTCTCTTGCGTTATTTAATTCAAAGAAACTTGATAATAGTTCCAAAGTCTGTAACACCGAAACGAATTGAAGAAAACTTTGGGGTATTTGATTTCCAACTTTCAAAAGAGGAAATGCATGAATTGAATACAAAAGGTTTGAATGAACGTCAATTCAAATTGTTGAAAATGGCTAATCATTCCGAGTATCCATTCAAAGATGCGTATTGAAGATTCAATGAATGG ACGTCATTGAAATGAAGG CTTAATTTCCTCATACTT ] [-] EMBL SMW782 [ ACATCACGGTAAAACACCGGCTCAAGTTCTCTTGCGTTATTTAATTCAAAGAAACTTGATAATAGTTCCAAAGTCTGTAACACCGAAACGAATTGAAGAAAACTTTGGGGTATTTGATTTCCAACTTTCAAAAGAGGAAATGCATGAATTGAATACAAAAGGTTTGAATGAACGTCAATTCAAATTGTTGAAAATGGCTAATCATTCCGAGTATCCATTCAAAGATGCGTATTGAAGATTCAATGAATGGAACGTCATTGAAATGAAGGACTTAATTTCATCATACTTTTAAACAAATTCTCTTGGTGTGCTGCTTTT TATTATTAAATAAAATCTA ] consensusID : consensus_10822#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 425 fasta sequence [TGAAAAGAGAGGACGTTTTTGTTACTTCTAAGCTGTGGAATACTTTTTTCCGCCCTGAGCATGTCAGGAAAGCCTGTGAAGAAACTTTGAAGAATTTGCGTCTTAAATACCTTGATTTGTACTTAATTCATTGGCCTGTTCCATTCCAAGAAATGGAAAAATTGGTTGATGATGGTTTAGTTAAATCTATTGGTTTATCAAATTTCAACAAACGTCAAACTGAAAATATTCTTAAACATTGTCGTATTAAACCAGCTAATTTACAAATTGAAATTCATGCTAATTTTCCTAATATACAATTAGTTGAATATGCACAATCGATTGGTTTAACTGTAACTGCTTATGCTCCACTTGGTTCACCTGCTGCTTCACCAGGAAGAGTTGATTTACTCATGGAACCTTGGGTTTTACAAATTGCTAAACAT] [+] EMBL CD196818 [TGAAAAGAGAGGACGTTTTTGTTACTTCTAAGCTGTGGAATACTTTTTTCCGCCCTGAGCATGTCAGGAAAGCCTGTGAAGAAACTTTGAAGAATTTGCGTCTTAAATACCTTGATTTGTACTTAATTCATTGGCCTGTTCCATTCCAAGAAATGGAAAAATTGGTTGATGATGGTTTAGTTAAATCTATTGGTTTATCAAATTTCAACAAACGTCAAACTGAAAATATTCTTAAACATTGTCGTATTAAACCAGCTAATTTACAAATTGAAATTCATGCTAATTTTCCTAATATACAATTAGTTGAATATGCACAATCGATTGGTTTAACTGTAACTGCTTATGCTCCACTTGGTTCACCTGCTGCTTCACCAGGAAGAGTTGATTTACTCATGGAACCTTGGGTTTTACAAATTGCTAAACAT] consensusID : consensus_10822#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 360 fasta sequence [TTTGCAAATTAAAGTTCATGCCAATTTTCCTAACACAAAATTAGTTGAGTATGCTCAGTCAGTCGGTTTGACTGTGACTGCTTATGCCCCGCTTGGTTCACATGCTCGTTCACCTTTATCAGCAAATTTATTAACTGAACCTTGGGTAATTTCAATTGCACAAAAGCACAATAGAACACCAGCACAAATTTTGCTACGTTACTTACTTCAACGTGATATAACCGTTGTACCAAAATCAATTACTAATGATAGAATAATAGAAAATTTTCAGATATTTGATTTTGAACTAACAAATGATGAAATGCATCAGCTGAATACGAATGGATTAAATCAACGTAAATTTAAAATGCTTGGAATGAT] [-] EMBL CD066599 [TTTGCAAATTAAAGTTCATGCCAATTTTCCTAACACAAAATTAGTTGAGTATGCTCAGTCAGTCGGTTTGACTGTGACTGCTTATGCCCCGCTTGGTTCACATGCTCGTTCACCTTTATCAGCAAATTTATTAACTGAACCTTGGGTAATTTCAATTGCACAAAAGCACAATAGAACACCAGCACAAATTTTGCTACGTTACTTACTTCAACGTGATATAACCGTTGTACCAAAATCAATTACTAATGATAGAATAATAGAAAATTTTCAGATATTTGATTTTGAACTAACAAATGATGAAATGCATCAGCTGAATACGAATGGATTAAATCAACGTAAATTTAAAATGCTTGGAATGAT] consensusID : consensus_10822#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 345 fasta sequence [TCAACATTGTTGAGCGTAAGACTCTTAAAAATATGAAGTCAATGAAAATGAGCAATGGTCATTCTATTCCTGTTGTCGGTCTTGGCACATGGAATAGTCCATCAGATGTAGTTGGAGCAGCTGTACAAAAAGCTTTAGAAGTTGGTTATCGTCATTTAGATTGAGCTTATATTTATAAAAATGAAATTGAACTTGGTCTAGCTCTAGAAGAGTCAATGAAACTTTTAAAATTGAACAGAGATGAATGATTTATCACTTCTAAATTATGGCATACAGGACATGACCCAGAAAATGTCAAGAGCTTCTGTGAAATGTCGCTATAGAAATTTACGGGTAAACTATTTG] [+] EMBL CD133176 [TCAACATTGTTGAGCGTAAGACTCTTAAAAATATGAAGTCAATGAAAATGAGCAATGGTCATTCTATTCCTGTTGTCGGTCTTGGCACATGGAATAGTCCATCAGATGTAGTTGGAGCAGCTGTACAAAAAGCTTTAGAAGTTGGTTATCGTCATTTAGATTGAGCTTATATTTATAAAAATGAAATTGAACTTGGTCTAGCTCTAGAAGAGTCAATGAAACTTTTAAAATTGAACAGAGATGAATGATTTATCACTTCTAAATTATGGCATACAGGACATGACCCAGAAAATGTCAAGAGCTTCTGTGAAATGTCGCTATAGAAATTTACGGGTAAACTATTTG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_10822#1 AAGCTCTAGAAGTTGGTTATCGACATTTGGACTGTGCTTATGTCTACAGAAATGAAGCGG 60 consensus_10822#2 ------------------------------------------------------------ consensus_10822#3 ------------------------------------------------------------ consensus_10822#0 ------------------------------------------------------------ consensus_10822#4 ------------------------------------------------------------ consensus_10822#1 AAATAGGTGGAGCGCTGGAATGTTCATTAAAGAGTCTAAACTTAAAAAGAGAGGACGTTT 120 consensus_10822#2 ------------------------------------------TGAAAAGAGAGGACGTTT 18 consensus_10822#3 -----------------------------------------------------------T 1 consensus_10822#0 ------------------------------------------------GAGCCATATTCG 12 consensus_10822#4 ------------------------------------------------------------ consensus_10822#1 TTGTTACTTCTAAGCTGTGGAATACTTTTTTCCGCCCTGAGCATGTCAGGAAAGCCTGTG 180 consensus_10822#2 TTGTTACTTCTAAGCTGTGGAATACTTTTTTCCGCCCTGAGCATGTCAGGAAAGCCTGTG 78 consensus_10822#3 TTGCAAAT--TAAAGTTCATGCCAATTTTCCTAACACAAAATTAGTTGAGTATGCTCAGT 59 consensus_10822#0 GCCGAGGTTACTTTGGATTTTTTTAGTAGTTATCCCGTAAGAATCTTAAAAATATGAAGT 72 consensus_10822#4 --------------------TCAACATTGTTGAGC-GTAAGACTCTTAAAAATATGAAGT 39 * * * * * consensus_10822#1 AAGAAACTTTGAAGAATTTGCGTCTTAAATACCTTGATTTGTACTTAATTCATTGGCCTG 240 consensus_10822#2 AAGAAACTTTGAAGAATTTGCGTCTTAAATACCTTGATTTGTACTTAATTCATTGGCCTG 138 consensus_10822#3 CAGTCGGTTTGA-----CTGTGACTG------CTTATGCCCCGCTTGGTTCACATGCTCG 108 consensus_10822#0 CAATGAAAATGAGCAATGGTCATTCTA--TTCCTGTTGTCGGTCTTGGTACATGGAATAG 130 consensus_10822#4 CAATGAAAATGAGCAATGGTCATTCTA--TTCCTGTTGTCGGTCTTGGCACATGGAATAG 97 * *** ** *** ** * consensus_10822#1 TTCCATTCCAATATGGTGAATGTCTTTTTCCCACTGATTCGAACGGGAATTTCTGTGTAG 300 consensus_10822#2 TTCCATTCCAA------------------------------------------------- 149 consensus_10822#3 TTCACCTTTA-------------------------------------------------- 118 consensus_10822#0 TCCATCAGATGT------------------------------------------------ 142 consensus_10822#4 TCCATCAGATGT------------------------------------------------ 109 * * consensus_10822#1 ATGAAGTACCACATGAGGAAACTTGGAAGGAAATGGAAAAATTGGTTGATGATGGTTTAG 360 consensus_10822#2 -----------------------------GAAATGGAAAAATTGGTTGATGATGGTTTAG 180 consensus_10822#3 ---------------------------------TCAGCAAATTTATTAACTGAACCTTGG 145 consensus_10822#0 -------------------------------AGTTGGTGCAGCTGTACAAAAAGCTTTAG 171 consensus_10822#4 -------------------------------AGTTGGAGCAGCTGTACAAAAAGCTTTAG 138 * * * * ** * consensus_10822#1 TTAAATCTATTGGTTTATCAAATTTCAACAAACGTCAAATTGAAAATATTCTTAAACATT 420 consensus_10822#2 TTAAATCTATTGGTTTATCAAATTTCAACAAACGTCAAACTGAAAATATTCTTAAACATT 240 consensus_10822#3 GTAATTTCAATTGCACA--AAAGCACAATAGAACACCAGCACAAATTTTGCT---ACGTT 200 consensus_10822#0 --AAGTTGGTTATCGTC----ATTTAGATTGTGCTTATATTTATAAAA------------ 213 consensus_10822#4 --AAGTTGGTTATCGTC----ATTTAGATTGAGCTTATATTTATAAAA------------ 180 ** * * * * * * consensus_10822#1 GTCGTATTAAACCAGCTAATTTACAAATTGAAATTCATGCTAATTTTCCTAATATACAAT 480 consensus_10822#2 GTCGTATTAAACCAGCTAATTTACAAATTGAAATTCATGCTAATTTTCCTAATATACAAT 300 consensus_10822#3 ACTTACTTCAACG---TGATATAACCGTTGTA--CCAAAATCAATTACTAATGATAGAAT 255 consensus_10822#0 ATGAAATTGAAGT---TGGTATAGCTTTAGAAGAGTCAATGAAACTTTTAAAATTGAACA 270 consensus_10822#4 ATGAAATTGAACT---TGGTCTAGCTCTAGAAGAGTCAATGAAACTTTTAAAATTGAACA 237 ** ** * * ** * * * * * * * * consensus_10822#1 TAGTTGAATATGCACAATCGATTGGTTTAACTGTAACTGCTTATGCTCCACTTGGT-TCA 539 consensus_10822#2 TAGTTGAATATGCACAATCGATTGGTTTAACTGTAACTGCTTATGCTCCACTTGGT-TCA 359 consensus_10822#3 -AATAGAAAATTTTCAGATATTTGATTTTGAACTAACAAATGATGA-------AAT-GCA 306 consensus_10822#0 GAGATGAATTATTTATCACTTCTAAATTATGGCATACAGGACATGACCCAGAAAATGTCA 330 consensus_10822#4 GAGATGAATGATTTATCACTTCTAAATTATGGCATACAGGACATGACCCAGAAAATGTCA 297 * *** * ** ** *** * ** consensus_10822#1 CCTGCTGCTTCACCAGGAAGAGTTGATTTACTCA-TGGAACCTTGGGTTTTACAAATTGC 598 consensus_10822#2 CCTGCTGCTTCACCAGGAAGAGTTGATTTACTCA-TGGAACCTTGGGTTTTACAAATTGC 418 consensus_10822#3 TCAGCTG-------AATACGAATGGATTAAATCAACGTAAATTTAAAATGCTTGGAATGA 359 consensus_10822#0 AGAGCTTCT-----GTGAAATGTCGCTA-AGAAA-TTTACGGTTAAACTATTTGGACTTG 383 consensus_10822#4 AGAGCTTCT-----GTGAAATGTCGCTATAGAAA-TTTACGGGTAAACTATTTG------ 345 *** * * * * * * * * * consensus_10822#1 TAAACATCACGGTAAAACACCGGCTCAAGTTCTCTTGCGTTATTTAATTCAAAGAAACTT 658 consensus_10822#2 TAAACAT----------------------------------------------------- 425 consensus_10822#3 T----------------------------------------------------------- 360 consensus_10822#0 TATTTGATACATTTCCCAGTATCTTTCAAGGCTGGTACTTCTGATTTTCCTACAGATGAG 443 consensus_10822#4 ------------------------------------------------------------ consensus_10822#1 GATAATAGTTCCAAAGTCTGTAACACCGAAACGAATTGAAGAAAACTTTGGGGTATTTGA 718 consensus_10822#2 ------------------------------------------------------------ consensus_10822#3 ------------------------------------------------------------ consensus_10822#0 AATAATAACCCAATCTTTGATACAGTTCCACTTGAAGAAACATGGAAGGCGATGGAAAAC 503 consensus_10822#4 ------------------------------------------------------------ consensus_10822#1 TTTCCAACTTTCAAAAGAGGAAATGCATGAATTGAATACAAAAGGTTTGAATGAACGTCA 778 consensus_10822#2 ------------------------------------------------------------ consensus_10822#3 ------------------------------------------------------------ consensus_10822#0 CTGGTCGACGAAGGTTTAGTCAAATCGATTGGTTTATCAAATTTCAATAGACGACAAATT 563 consensus_10822#4 ------------------------------------------------------------ consensus_10822#1 ATTCAAATTGTTGAAAATGGCTAATCATTCCGAGTATCCATTCAAAGATGCGTATTGAAG 838 consensus_10822#2 ------------------------------------------------------------ consensus_10822#3 ------------------------------------------------------------ consensus_10822#0 GAAAATATTCTTAAACATTGTCGTATTAAACCAGTTAATTTGCAAATTGAAGTTCATGCC 623 consensus_10822#4 ------------------------------------------------------------ consensus_10822#1 ATTCAATGAATGGAACGTCATTGAAATGAAGGACTTAATTTCATCATACTTTTAAACAAA 898 consensus_10822#2 ------------------------------------------------------------ consensus_10822#3 ------------------------------------------------------------ consensus_10822#0 AATTTTCCTAACACAAAATTAGTTGAATATGCTCAGTCAGTCGGTTTGACTGTGACTGCT 683 consensus_10822#4 ------------------------------------------------------------ consensus_10822#1 TTCTCTTGGTGTGCTGCTTTTTATTATTAAATAAAATCTAAATCGCTTCAAAAAAAGTTA 958 consensus_10822#2 ------------------------------------------------------------ consensus_10822#3 ------------------------------------------------------------ consensus_10822#0 TATGCCCCGCTTGGTTCACCTGCTCGTTCACCTTTATCAGCANATTTATTAACTGAACCT 743 consensus_10822#4 ------------------------------------------------------------ consensus_10822#1 ------------------------------------------------------------ consensus_10822#2 ------------------------------------------------------------ consensus_10822#3 ------------------------------------------------------------ consensus_10822#0 TGGGTAATTTCAATTGCACAAAAGCACAATAGAACACCAGCACANATTTTGCTACGTTAC 803 consensus_10822#4 ------------------------------------------------------------ consensus_10822#1 ------------------------------------------------------------ consensus_10822#2 ------------------------------------------------------------ consensus_10822#3 ------------------------------------------------------------ consensus_10822#0 TTACTTCAACGTGATATAACCGTTGTACCANAATCAATTACTAATGATAGAAATATAGAA 863 consensus_10822#4 ------------------------------------------------------------ consensus_10822#1 ------------------------------------------------------------ consensus_10822#2 ------------------------------------------------------------ consensus_10822#3 ------------------------------------------------------------ consensus_10822#0 NATTTTCAGTTTATCAGCANATTTATTAACTGAACCTTGGNGTATTTCATTGCACAAAGC 923 consensus_10822#4 ------------------------------------------------------------ consensus_10822#1 ------------------------------------------------------------ consensus_10822#2 ------------------------------------------------------------ consensus_10822#3 ------------------------------------------------------------ consensus_10822#0 ACATAGACACCGCACNAATTTGCTCGTTACTACTTCACGTGATTACCGTTGACANATCAT 983 consensus_10822#4 ------------------------------------------------------------ consensus_10822#1 ------------------ consensus_10822#2 ------------------ consensus_10822#3 ------------------ consensus_10822#0 ACTATGATGATATAGAAA 1001 consensus_10822#4 ------------------ |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||