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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10826#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1155 fasta sequence
[GCCAAGAGTTCGGCACGAGGGCCGCTCCTGCACCCAAGTGAACGTCGAAATACAACGTGCTACAGTTTGGCTTAGATGGTTACTCACGCACACTGCTCTTCATAGTTCCCAGACACACAACCTACCTCCAAGCTAGACGCAAATTAACCAAAGGCTGAAATCGGTATCTGTATTTTGTTTAGACTGTGTTTCCACTTCAAGCCAAAAATTTAGCCATTTGGCAAATTGTTACTCTGGAACACATGGTAACCTCGAAATGGATTTCCTCACTTGTGCTTCATGCATGAGAAATGGAATATGTTTACCTGTTACAAGTGTCAAATGTATGGTGGGAAACGAGTTAATTTTTTGTCAAAATAAAGAGTGCATACACTATTTCCTACCATTGAATATCCTATCTTTTAAACATGACTCAACCGGTGAGTGTGAATATCCTGCCTGTAAACAGTTATTGTTTCAATTAATTGGTTTTTGTTTTGATTTTCATATTGTAATTGTTGTGTAAGCTTCGTCCTTGGTCGGCGTGTTCTCATGGCATATACTGTCCTGATAGAACACTGCCTTTTTTCTTTTCCAAGGTTTATTAGCATGATTAAATGCCCGAACAAGTATTGTGTCAGAGAATATAAAGTTTCTCANAGTTTCAGAAATATCTCGTCATACTGACCGCCACGAAGTTAAAGACGAGTTGAAATGGACAACTGAAGCGTTTCATGCTCCATTAAGAAGATCGGAAACATTGTCCAGTGCCAAGTCAAGTGGAGAAATTACAATCACGACAGATACTGTTATGAGCTTGCACGCCTTCGAAAATATGGCCCCTAAAACAAAAAATATGACTTCGAAATTTTCTAATACTGTTGTAACCAATGAAACTTGCTCTTTATCTACATCACATTCTGGTTCCCGGACCACTTACAGTCATTACAAGCGATCCATTTTACGACAAGTAAAACGTCAAGCAGATAACCTTCGATTAAAGCTTGTTAAAGAGCGTCGTACAATAAGTCACGAACGATTGGTTGATCCACTCCTGTCCACAAGGCAACGCTTTGTGTAGCTTAAATGTACATACTCTACTGATCGTACTAACTTTGTAGGTATATTGTAAATAGTTAACATAAAACTGTTTTTTTGTTTAAAAAAAAAGTTAAA]
[+] EMBL CD079552 [GCCAAGAGTTCGGCACGAGGGCCGCTCCTGCACCCAAGTGAACGTCGAAATACAACGTGCTACAGTTTGGCTTAGATGGTTACTCACGCACACTGCTCTTCATAGTTCCCAGACACACAACCTACCTCCAAGCTAGACGCAAATTAACCAAAGGCTGAAATCGGTATCTGTATTTTGTTTAGACTGTGTTTCCACTTCAAGCCAAAAATTTAGCCATTTGGCAAATTGTTACTCTGGAACACATGGTAACCTCGAAATGGATTTCCTCACTTGTGCTTCATGCATGAGAAATGGAATATGTTTACCTGTTACAAGTGTCAAATGTATGGTGGGAAACGAGTTAATTTTTTGTCAAAATAAAGAGTGCATACACTATTTCCTACCATTGAATATCCTATCTTTTAAACATGACTCAACCGGTGAGTGTGAATATCCTGCCTGTAAACAGTTATTGTTTCAATTAATTGGTTTTTGTTTTGATTTTCATATTGTAATTGTTGTGTAAGCTTCGTCCTTGGTCGGCGTGTTCTCATGGCATATACTGTCCTGATAGAACACTGCCTTTTTTCTTTTCCAAGGTTTATTAGCATGATTAAATGCCCGAACAAGTATTGTGTCAGAGAATATAAAGTTTCTCANAGTTTCAGAAATATCTCGTCATACTGAC ]
[+] EMBL CD077431 [ ggccaGAATTCGGCACGAGGATTTTGTTTAGACTGTGTTTCCACTTCAAGCCAAAAATTTAGCCATTTGGCAAATTGTTACTCTGGAACACATGGTAACCTCGAAATGGATTTCCTCACTTGTGCTTCATGCATGAGAAATGGAATATGTTTACCTGTTACAAGTGTCAAATGTATGGTGGGAAACGAGTTAATTTTTTGTCAAAATAAAGAGTGCATACACTATTTCC ]
[-] EMBL CD073819 [ GGCATATACTGTCCTGATAGAACACTGCCTTTTTTCTTTTCCAAGGTTTATTAGCATGATTAAATGCCCGAACAAGTATTGTGTCAGAGAATATAAAGTTTCTCAAAGTTTCAGAAATATCTCGTCATACTGACCGCCACGAAGTTAAAGACGAGTTGAAATGGACAACTGAAGCGTTTCATGCTCCATTAAGAAGATCGGAAACATTGTCCAGTGCCAAGTCAAGTGGAGAAATTACAATCACGACAGATACTGTTATGAGCTTGCACGCCTTCGAAAATATGGCCCCTAAAACAAAAAATATGACTTCGAAATTTTCTAATACTGTTGTAACCAATGAAACTTGCTCTTTATCTACATCACATTCTGGTTCCCGGACCACTTACAGTCATTACAAGCGATCCATTTTACGACAAGTAAAACGTCAAGCAGATAACCTTCGATTAAAGCTTGTTAAAGAGCGTCGTACAATAAGTCACGAACGATTGGTTGATCCACTCCTGTCCACAAGGCAACGCTTTGTGTAGCTTAAATGTACATACTCTACTGATCGTACTAACTTTGTAGGTATATTGTAAATAGTTAACATAAAACTGTTTTTTTGTTTAAAAAAAAAGTTAAA]
consensusID : consensus_10826#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 16 consensus length = 1052 fasta sequence
[TCGCATACGTAATGCAGCTGCATGGCATGTTTTTTTTTTTTTTTTTTTTTTTTTTTTCAACCAAAATTTATATTTTTTTTTTTAAAGGCCAATAATAATCTAAAAAAGTCATCCTTGTTTAAAGCACGGGCACGCTTTTTTTCAAAACCTGAGTCTCGAAGTATGTTTGTTATTTTCTCCTCCATTGCTGAAACACCAGTAGACTCACAGGCAATAGCCTCTGGAGTTGGTGACAATCCTTTTGTGCAACAAGTCTCCATGTAAATTTTACGTAAATGAGAAGCTATCGATTTGCCGCTAAAGTTAGCTCCGATCGTTTTGTTTTTGCGAGCAAACACAAGACGCAGTAGTCCATCCCATTCTGAATGCATTACAGGCGGTAATGGATGCCTGGGCTCAATCCGAACAACAGCTGAATCAACACGTGGTGGGGGA-CGAAAACTGTTTCTATTGATTTTCATCAACTGTTCAATTT-TGAAGTGAAACTGAGCAGATGCTGACAGACGACAGTATAATTTATCTCCAGATTTAGCCGTAAGACGGTCAGCGAATTCTTTCTGAAGCATAACAACCGCTGCTCTAAAACCATGACCTGCACTAATCAGTCTTTGGATGAATGGCGAAGAGATCTTATACGGCAGGTTCGCTATGCAGAGATCGAACTTGGGCCATGATTTTGCCTTGATTGCATCGCCAACGAGAATTTCTAGTTTGGTTCGATGTAGTGAGGTTTGCACACGCTTTTGCAATTCTGAAACCATTCTTGGATCTATTTCGAACGCGTACACTTTCCTTCCCTTTTCTAACAACTTGACAGTGAGATTACCAGTTCCAGAACCAATTTCCAGCAAGGAGTCTGTGGACTTGATACCAGACTTTTCCACCATTGTGTTAATAACGAGGGGATTTTTCAGTATATGCTGACCTTTTGTCTTCTGAAACCGGATACCGCCTGTTTTAATAGCTAAACTAGAGGAATCAAATTTTGGTTTGACCATTGTATATGCTTTTTTCGAAAACCAAGCCCCTGATGGGCTTATTTGTGGTCTGTA]
[+] EMBL AI977083 [TCGCATACGTAATGCAGCTGCATGGCATGTTTTTTTTTTTTTTTTTTTTTTTTTTTTCAACCAAAATTTATATTTTTTTTTTTAAAGGCCAATAATAATCTAAAAAAGTCATCCTTGTTTAAAGCACGGGCACGCTTTTTTTCAAAACCTGAGTCTCGAAGTATGTTTGTTATTTTCTCCTCCATTGCTGAAACACCAGTAGACTCACAGGCAATAGCCTCTGGAGTTGGTGACAATCCTTTTGTGCAACAAGTCTCCATGTAAATTTTACGTAAA ]
[+] EMBL AI395402 [ TTTTTTTTTTTTTTTTCAACCAAAATTTATATTTACTTTTTTAAAGGCCAATAATAATCTAAGAAAGTCATCCTCGTCTAAAGCACGGGCACGCTTTTTTTCAAAACCTGAGTCTCGAAGTATGTTTGTTATTTTCTCCTCCATTGCTGAAACACCAGTAGACTCACAGGCAATAGCCTCTGGAGTTGGAGACAATCCTTTTGTGCAACAAGTCTCCATGTAAATTTTACGTAAATGAGAAGCTATCGATTTGCCGCTAAAGTTAGCTCCGATCGTTTTGTTTTTGCGAGCAAACACAAGACGCAGTAGTCCATCCCATTCTGAATGCATTACAGGTGGTAATGGATGCCTGGGCTCAATCCGAGCAACAGCTGAATCATCACGTGGTGGGGGACCGAATACTGATTCTATTGCTTTTCAGCAACTGCTCATTTTATGAGGTG AACTGATCAGATGCTGTCAG ]
[+] EMBL CD191502 [ AGTCTCGAAGTATGTTTGTTATTTTCTCCTCCATTGCTGAAACACCAGTAGACTCACAGGCAATAGCCTCTGGAGTTGGTGACAATCCTTTTGTGCAACAAGTCTCCATGTAAATTTTACGTAAATGAGAAGCTATCGATTTGCCGCTAAAGTTAGCTCCGATCGTTTTGTTTTTGCGAGCAAACACAAGACGCAGTAGTCCATCCCATTCTGAATGCATTACAGGCGGTAATGGATGCCTGGGCTCAATCCGAACAACAGCTGAATCAACACGTGGTGGGGGA CGAAAACTGTTTCTATTGATTTTCATCAACTGTTCAATTT TGAAGTGAAACTGAGCAGATGCTGACAGACGACAGTATAATTTATCTCCAGATTTAGCCGTAAGACGGTCAGCGAATTCTTTCTGAAGCATAACAACCG ]
[-] EMBL CD191512 [ AGACTCACAGGCAATAGCCTCTGGAGTTGGTGACAATCCTTTTGTGCAACAAGTCTCCATGTAAATTTTACGTAAATGAGAAGCTATCGATTTGCCGCTAAAGTTAGCTCCGATCGTTTTGTTTTTGCGAGCANACACAAGACGCAGTAGTCCATCCCATTCTGAATGCATTACAGGCGGTAATGGATGCCTGGGCTCAATCCGAACAACAGCTGAATCAACACGTGGTGGGGGA CGAAAACTGTTTCTATTGATTTTCATCAACTGTTCAATTT TGAAGTGAAACTGAGCAGATGCTGACAGACGACAGTATAATTTATCTCCAGATTTAGCCGTAAGACGGTCAGCGAATTCTTTCTGAAGCATAACAACCGCTGCTCTAAAACCATGACCTGCACTAATCAGTCTTTGGATGAATGGCGAA ]
[-] EMBL CD191530 [ CGAACAACAGCTGAATCAACACGTGGTGGGGGA CGAAAACTGTTTCTATTGATTTTCATCAACTGTTCAATTT TGAAGTGAAACTGAGCAGATGCTGACAGACGACAGTATAATTNATCTCCAGATTTAGCCGTAAGACGGTCAGCGAATTCTTTCTGAAGCATAACAACCGCTGCTCTAAAACCATGACCTGCACTAATCAGTCTTTGGATGAATGGCGAAGAGATCTTATACGGCAGGTTCGCTATGCAGAGATCGAACTTGGGCCATGATTTTGCCTTGATTGCATCGCCAACGAGAATTTCTAGTTTGGTTCGATGTAGTGAGGTTTGCACACGCTTTTGCAATTCTGAAACCATTCTTGGATCTATTTCGAACGCGTACACTTTCCTTCCCTTTTCTAACAACTTGACAGTGAGATTACCAGTTCCAGAACCAATTTCCAGCAAGGAGTCTGTGGACTTGATACCA ]
[-] EMBL CD191516 [ AACAACAGCTGAATCAACACGTGGTGGGGGA CGAAAACTGTTTCTATTGATTTTCATCAACTGTTCAATTT TGAAGTGAAACTGAGCAGATGCTGACAGACGACAGTATAATTTATCTCCAGATTNAGCCGTAAGACGGTCAGCGAATTCTTTCTGAAGCATAACAACCGCTGCTCTAAAACCATGACCTGCACTAATCAGTCTTTGGATGAATGGCGAAGAGATCTTATACGGCAGGTTCGCTATGCAGAGATCGAACTTGGGCCATGATTTTGCCTTGATTGCATCGCCAACGAGAATTTCTAGTTTGGTTCGATGTAGTGAGGTTTGCACACGCTTTTGCAATTCTGAAACCATTCTTGGATCTATTTCGAACGCGTACACTTTCCTTCCCTTTTCTAACAACTTGACAGTGAGATTACCAGTTCCAGAACCAATTTCCAGCAAGGAGTCTGTGGACTTGATACCA ]
[-] EMBL CD083627 [ CAACACGTGTTGGGGGA CGAAAACTGTTTCTAGTGATTTTCATCAACTGTTCAATTT TGAAGTGAAACTGAGCAGATGCTGACAGACGACAGTATAATTTATCTCCAGATTTAGCCGTAAGACGGTCAGCGAATTCTTTCTGAAGCATAACAACCGCTGCTCTAAAACCATGACCTGCACTAATCAGTCTTTGGATGAATGGCGAAGAGATCTTATACGGCAGGTTCGCTATGCAGAGATCGAACTTGGGCCATGATTTTGCCTTGATTGCATCGCCAACGAGAATTTCTAGTTTGGTTCGATGTAGTGAGGTTTGCACACGCTTTTGCAATTCTGAAACCATTCTTGGATCTATTTCGAACGCGTACACTTTCCTTCCCTTTTCTAACAACTTGACAGTGAGATTACCAGTTCCAGAACCAATTTCCAGCAAGGAGTCTGTGGACTTGATACCAGACTTTTCCAaaaaaag ]
[-] EMBL CD191503 [ GGGGGA CGAAAACTGTTTCTATTGATTTTCATCAATTGTTCAATTT TGAAGTGAAACTGAGCAGATGCTGACAGACGACAGTATAATTGATCTCCAGATTTAGCCGTAAGACGGTCAGCGAATTCTTTCTGAAGCATAACAACCGCTGCTCTAAAACCATGACCTGCACTAATCAGTCTTTGGATGAATGGCGAAGAGATCTTATACGGCAGGTTCGCTATGCAGAGATCGAACTTGGGCCATGATTTTGCCTTGATTGCATCGCCAACGAGAATTTCTAGTTTGGTTCGATGTAGTGAGGTTTGCACACGCTTTTGCAATTCTGAAACCATTCTTGGATCTATTTCGAACGCGTACACTTTCCTTCCCTTTTCTAACAACTTGACAGTGAGATTACCAGTTCCAGAACCAATTTCCAGCAAGGAGTCTGTGGACTTGATACCA ]
[-] EMBL CD191562 [ AACTGTTTCTATTGATTTTCATCAACTGTTCAATTT TGAAGTGAAACTGAGCAGATGCTGACAGACGACAGTATAATTGATCTCCAGATTTAGCCGTAAGACGGTCAGCGAATTCTTTCTGAAGCATAACAACCGCTGCTCTAAAACCATGACCTGCACTAATCAGTCTTTGGATGAATGGCGAAGAGATCTTATACGGCAGGTTCGCTATGCAGAGATCGAACTTGGGCCATGATTTTGCCTTGATTGCATCGCCAACGAGAATTTCTAGTTTGGTTCGATGTAGTGAGGTTTGCACACGCTTTTGCAATTCTGAAACCATTCTTGGATCTATTTCGAACGCGTACACTTTCTTTCCCTTTTCTAACAACTTGACAGTGAGATTACCAGTTCCAGAACCAATTTCCAGCAAGGAGTCTGTGGACTTGATACCA ]
[-] EMBL CD191514 [ ACTGTTTCTATTGATTTTCATCAACTGTTCAATTT TGAAGTGAAACTGAGCAGATGCTGACAGACGACAGTATAATTTATCTCCAGATTTAGCCGTAAGACGGTCAGCGAATTCTTTCTGAAGCATAACAACCGCTGCTCTAAAACCATGACCTGCACTAATCAGTCTTTGGATGAATGGCGAAGAGATCTTATACGGCAGGTTCGCTATGCAGAGATCGAACTTGGGCCATGATTTTGCCTTGATTGCATCGCCAACGAGAATTTCTAGTTTGGTTCGATGTAGTGAGGTTTGCACACGCTTTTGCAATTCTGAAACCATTCTTGGATCTATTTCGAACGCGTACACTTTCCTTCCCTTTTCTAACAACTTGACAGTGAGATTACCAGTTCCAGAACCAATTTCCAGCAAGGAGTCTGTGGACTTGATACCA ]
[-] EMBL CD191489 [ TTTCTATTGATTTTCATCAACTGTTCAATTT TGAAGTGAAACTGAGCAGATGCTGACAGACGACAGTATAATTTATCTCCAGATTTAGCCGTAAGACGGTCAGCGAATTCTTTCTGAAGCATAACAACCGCTGCTCTAAAACCATGACCTGCACTAATCAGTCTTTGGATGAATGGCGAAGAGATCTTATACGGCAGGTTCGCTATGCAGAGATCGAACTTGGGCCATGATTTTGCCTTGATTGCATCGCCAACGAGAATTTCTAGTTTGGTTCGATGTAGTGAGGTTTGCACACGCTTTTGCAATTCTGAAACCATTCTTGGATCTATTTCGAACGCGTACACTTTCCTTCCCTTTTCTAACAACTTGACAGTGAGATTACCAGTTCCAGAACCAATTTCCAGCAAGGAGTCTGTGGACTTGATACCA ]
[-] EMBL CD191537 [ TTCATCAACTGTTCAATTT TGAAGTGAAACTGAGCAGATGCTGACAGACGACAGTATAATTTATCTCCAGATTTAGCCGTAAGACGGTCAGCGAATTCTTTCTGAAGCATAACAACCGCTGCTCTAAAACCATGACCTGCACTAATCAGTCTTTGGATGAATGGCGAAGAGATCTTATACGGCAGGTTCGCTATGCAGAGATCGAACTTGGGCCATGATTTTGCCTTGATTGCATCGCCAACGAGAATTTCTAGTTTGGTTCGATGTAGTGAGGTTTGCACACGC TTTGCAATTCTGAAACCGTTCTTGGATCTATTTCGAACGCGTACACTTTCCTTCCCTTTTCTAACAACTTGACAGTGAGATTACCAGTTCCAGAACCAATTTCCAGCAAGGAGTCTGTGGACTTGATACCA ]
[-] EMBL CD191553 [ AACTGTTCAATTT TGAAGTGAAACTGAGCAGATGCTGACAGACGACAGTATAATTTATCTCCAGATTTAGCCGTAAGACGGTCAGCGAATTCTTTCTGAAGCATAACAACCGCTGCTCTAAAACCATGACCTGCACTAATCAGTCTTTGGATGAATGGCGAAGAGATCTTATACGGCAGGTTCGCTATGCAGAGATCGAACTTGGGCCATGATTTTGCCTTGATTGCATCGCCAACGAGAATTTCTAGTTTGGTTCGATGTAGTGAGGTTTGCACACGCTTTTGCAATTCTGAAACCATTCTTGGATCTATTTCGAACGCGTACACTTTCCTTCCCTTTTCTAACAACTTGACAGTGAAATTACCAGTTCCAGAACCAATTTCCAGCAAGGAGTCTGTGGACTTGATACCA ]
[-] EMBL CD071680 [ CAGTATAATTAATCTCCAGATTTAGCCGTAAGACGGTCAGCGAATTCTTTCTGAAGCATAACAACCGCTGCTCTAAAACCATGACCTGCACTAATCAGT ]
[-] EMBL CD114911 [ CCGCTGCTCTAAAACCATGACCTGCACTAATCAGTCTTTGGATGAATGGCGAAGAGATCTTATACGGCAGGTTCGCTATGCTGAGATCGAACTTGGGCCATGATTTTGCCTTGATTGCATCGCCAACGAGAATTTCTAGTTTGGTTCGATGTAGTGAGGTTTGCACACGCTTTTGCAATTCTGAAACCATTCTTGGATCTATTTCGAACGCGTACACTTTCCTTCCCTTTTCTAACAACTTGACAGTGAGATTACCAGTTCCAGAACCAATTTCCAGCAAGGAGTCTGTGGACTTGATACCAGACTTTTCCACCATTGTGTTAATAACGAGGGGATTTTTCAGTATATGCTGACCTTTTGTCTTCTGAAACCGGATACCGCCTGTTTTAATAGCTAAACTAGAGGAATCAAATTTTGGTTTGACCATTGTATATGCTTTTTTCGAAAACCAAGCCCCTGATGGGCTTATTTGTGGTCTGTA]
[-] EMBL CD114910 [ CCGCTGCTCTAAAACCATGACCTGCACTAATCAGTCTTTGGATGAATGGCGAAGAGATCTTATACGGCAGGTTCGCTATGCTGAGATCGAACTTGGGCCATGATTTTGCCTTGATTGCATCGCCAACGAGAATTTCTAGTTTGGTTCGATGTAGTGAGGTTTGCACACGCTTTTGCAATTCTGAAACCATTCTTGGATCTATTTCGAACGCGTACACTTTCCTTCCCTTTTCTAACAACTTGACAGTGAGATTACCAGTTCCAGAACCAATTTCCAGCAAGGAGTCTGTGGACTTGATACCAGACTTTTCCACCATTGTGTTAATAACGAGGGGATTTTTCAGTATATGCTGACCTTTTGTCTTCTGAAACCGGATACCGCCTGTTTTAATAGCTAAACTAGAGGAATCAAATTTTGGTTTGACCATTGTATATGCTTTTTTCGAAAACCAAGCCCCTGATGGGCTTATTTGTGGTCTGTA]
consensusID : consensus_10826#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 885 fasta sequence
[CCCTCGAGCCAANAATTCGGCACGAGGCGAACAAGTATTGTGTCAGAGAATATAAAGTTTCTCAAAGTTTCAGAAATATCTCGTCATACTGACCGCCACGAAGTTAAAGACGAGTTGAAATGGACAACTGAAGCGTTTCATGCTCCATTAAGAAGATCGGAAACATTGTCCAGTGCCAAGTCAAGTGGAGAAATTACAATCACGACAGATACTGTTATGAGCTTGCACGCCTTCGAAAATATGGCCCCTAAAACAAAAAATATGACTTCGAAATTTTCTAATACTGTTGTAACCAATGAAACTTGCTCTTTATCTACATCACATTCTGGTTCCCGGACCACTTACAGTCATTACAAGCGATCCATTTTACGACAAGTAAAACGTCAAGCAGATAACCTTCGATTAAAGCTTGTTAAAGAGCGTCGTACAATAAGTCACGAACGATTGGTTGATCCACTCCTGTCCACAAGGCAACGCTTTGTGTAGCTTAAATGTACATACTCTACTGATCGTACTAACTTTGCCAATAATAATCTAAGAAAGTCATCCTCGTCTAAAGCACGGGCACGCTTTTTTTCAAAACCTGAGTCTCGAAGTATGTTTGTTATTTTCTCCTCCATTGCTGAAACACCAGTAGACTCACAGGNCATAGCCTCTGGAGTTGGTGACAATCCTTTTGTGCAACAAGTCTNNCATGTAATTTTACGTAAATGAGAAGCTATCGATTTGCCGCTAAAGTAGCTNCGATCGTTNTGTTTTTGCGAGCAACACAGACGCAGTAGTCATCCATTCTGATGCATACAGCGGTATGGATGCCTGGCTCNATCGACACAGCTGATCACCACGTGTGGGGGAGAAACTGNTNCTATGATCTATATTAAATAN]
[+] EMBL CD081963 [CCCTCGAGCCAANAATTCGGCACGAGGCGAACAAGTATTGTGTCAGAGAATATAAAGTTTCTCAAAGTTTCAGAAATATCTCGTCATACTGACCGCCACGAAGTTAAAGACGAGTTGAAATGGACAACTGAAGCGTTTCATGCTCCATTAAGAAGATCGGAAACATTGTCCAGTGCCAAGTCAAGTGGAGAAATTACAATCACGACAGATACTGTTATGAGCTTGCACGCCTTCGAAAATATGGCCCCTAAAACAAAAAATATGACTTCGAAATTTTCTAATACTGTTGTAACCAATGAAACTTGCTCTTTATCTACATCACATTCTGGTTCCCGGACCACTTACAGTCATTACAAGCGATCCATTTTACGACAAGTAAAACGTCAAGCAGATAACCTTCGATTAAAGCTTGTTAAAGAGCGTCGTACAATAAGTCACGAACGATTGGTTGATCCACTCCTGTCCACAAGGCAACGCTTTGTGTAGCTTAAATGTACATACTCTACTGATCGTACTAACTTTGCCAATAATAATCTAAGAAAGTCATCCTCGTCTAAAGCACGGGCACGCTTTTTTTCAAAACCTGAGTCTCGAAGTATGTTTGTTATTTTCTCCTCCATTGCTGAAACACCAGTAGACTCACAGGNCATAGCCTCTGGAGTTGGTGACAATCCTTTTGTGCAACAAGTCTNNCATGTAATTTTACGTAAATGAGAAGCTATCGATTTGCCGCTAAAGTAGCTNCGATCGTTNTGTTTTTGCGAGCAACACAGACGCAGTAGTCATCCATTCTGATGCATACAGCGGTATGGATGCCTGGCTCNATCGACACAGCTGATCACCACGTGTGGGGGAGAAACTGNTNCTATGATCTATATTAAATAN]
[+] EMBL CD084269 [ ACGAGTTGAAATGGACAACTGAAGCGTTTCATGCTCCATTAAGAAGATCGGAAACATTGTCCAGTGCCAAGTCAAGTGGAGAAATTACAATCACGACAGATACTGTTATGAGCTTGCACGCCTTCGAAAATATGGCCCCTAAAACAAAAAATATGACTTCGAAATTTTCTAATACTGTTGTAACCAATGAAACTTGCTCTTTATCTACATCACATTCTGGTTCCCGGACCACTTACAGTCATTACAAGCGATCCATTTTACGACAAGTAAAACGTCAAGCAGATAACCTTCGATTAAAGCTTGTTAAAGAGCGTCGTACAATAAGTCACGAACGATTGGTTGATCCACTCCTGTCCACAAGGCAACGCTTTGTGTAGCTTAAATGTACATACTCTACTGATCGTACTAACTTTGCCAATAATAATCTAAGAAAGTCATCCTCGTCTAAAGCACGGGCACGCTTTTTTTCAAAACCTGAGTCTCGAAGTATGTTTGTTATTTTCTCCTCCATTGCTGAAACACCAGTAGA ]
consensusID : consensus_10826#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 504 fasta sequence
[TGGGAATTGGCCCTCAGGCCAGAATCGGCACGAGGTTTCCTAGTATCTCGTCATACTGACCGCCACGAAGTTAAAGACGAGTTGAAATGGACAACTGAAGCGTTTCATGCTCCATTAAGAAGATCGGAAACATTGTCCAGTGCCAAGTCAAGTGGAGAAATTACAATCACGACAGATACTGTTATGAGCTTGCACGCCTTCGAAAATATGGCCCCTAAAACAAAAAATATGACTTCGAAATTTTCTAATACTGTTGTAACCAATGAAACTTGCTCTTTATCTACATCACATTCTGGTTCCCGGACCACTTACAGTCATTACAAGCGATCCATTTTACGACAAGTAAAACGTCAAGCAGATAACCTTCGATTAAAGCTTGTTAAAGAGCGTCGTACAATAAGTCACGAACGATTGGTTGATCCACTCCTGTCCACAAGGCAACGCTTTGTGTAGCTTAAATGTACATACTCTACTGATCGTACTAACTTTGTAAATATATTGTAA]
[+] EMBL CD084384 [TGGGAATTGGCCCTCAGGCCAGAATCGGCACGAGGTTTCCTAGTATCTCGTCATACTGACCGCCACGAAGTTAAAGACGAGTTGAAATGGACAACTGAAGCGTTTCATGCTCCATTAAGAAGATCGGAAACATTGTCCAGTGCCAAGTCAAGTGGAGAAATTACAATCACGACAGATACTGTTATGAGCTTGCACGCCTTCGAAAATATGGCCCCTAAAACAAAAAATATGACTTCGAAATTTTCTAATACTGTTGTAACCAATGAAACTTGCTCTTTATCTACATCACATTCTGGTTCCCGGACCACTTACAGTCATTACAAGCGATCCATTTTACGACAAGTAAAACGTCAAGCAGATAACCTTCGATTAAAGCTTGTTAAAGAGCGTCGTACAATAAGTCACGAACGATTGGTTGATCCACTCCTGTCCACAAGGCAACGCTTTGTGTAGCTTAAATGTACATACTCTACTGATCGTACTAACTTTGTAAATATATTGTAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_10826#0 GCCAAGAGTTCGGCACGAGGGCCGCTCCTGCACCCAAGTGAACGTCGAAATACAACGTGC 60
consensus_10826#3 ------------------------------------------------------------
consensus_10826#2 ------------------------------------------------------------
consensus_10826#1 ------------------------------------------------------------
consensus_10826#0 TACAGTTTGGCTTAGATGGTTACTCACGCACACTGCTCTTCATAGTTCCCAGACACACAA 120
consensus_10826#3 ------------------------------------------------------------
consensus_10826#2 ------------------------------------------------------------
consensus_10826#1 ---------------------------------TCGCATACGTAATGCAGCTGCATGGCA 27
consensus_10826#0 CCTACCTCCAAGCTAGACGCAAATTAACCAAAGGCTGAAATCGGTATCTGTATTTTGTTT 180
consensus_10826#3 ------------------------------------------------------------
consensus_10826#2 ------------------------------------------------------------
consensus_10826#1 TGTTTTTTTTTTTTTTTTTTTTTTTTTTTTCAA-CCAAAATTTATATTTTTTTTTTTAAA 86
consensus_10826#0 AGACTGTGTTTCCACTTCAAGCCAAAAATTTAGCCATTTGGCAAATTGTTACTCTGGAAC 240
consensus_10826#3 ------------------------------------------------------------
consensus_10826#2 ------------------------------------------------------------
consensus_10826#1 GGCCAATAATAATCTAAAAAAGTCATCCTTGTTTAAAGCACGGGCACGCTTTTTTTCAAA 146
consensus_10826#0 ACATGGTAACCTCGAAATGGATTTCCTCACTTGTGCTTCATGCATGAGAAATGGAATATG 300
consensus_10826#3 ------------------------------------------------------------
consensus_10826#2 ------------------------------------------------------------
consensus_10826#1 ACCTG--AGTCTCGAAGTATGTTTGTTATTTTCTCCTCCATTGCTGAAACACC-AGTAGA 203
consensus_10826#0 TTTACCTGTTACAAGTGTCAAATGTATGGTGGGAAACGAGTTAATTTTTTGTCAAAATAA 360
consensus_10826#3 ------------------------------------------------------------
consensus_10826#2 ------------------------------------------------------------
consensus_10826#1 CTCACAGGCAATA-GCCTCTGGAGT-TGGTGACAATC--------CTTTTGTGCAA--CA 251
consensus_10826#0 AGAGTGCATACACTATTTCCTACCATTGAATATCCTATCTTTTAAACATGACTCAACCGG 420
consensus_10826#3 ------------------------------------------------------------
consensus_10826#2 ------------------------------------------------------------
consensus_10826#1 AGTCTCCATGTAA-ATTTTACGTAAATGAGAAGCTATCGATTTGCCGCTAAAGTTAGCTC 310
consensus_10826#0 TGAGTGTGAATATCCTGCCTGTAAACAGTTATTGTTTCAATTAATTGGTTTTTGTTTTGA 480
consensus_10826#3 ------------------------------------------------------------
consensus_10826#2 ------------------------------------------------------------
consensus_10826#1 CGATCGTTTTGTTTTTGCGAGCAAACACAAGACGCAGTAGTCCATCCCATTCTGAATGCA 370
consensus_10826#0 TTTTCATATTGTAATTGTTGTGTAAGCTTCGTCCTTGGTCGGCGTGTTCTCATGGCATAT 540
consensus_10826#3 ------------------------------------------------------------
consensus_10826#2 ------------------------------------------------------------
consensus_10826#1 TTA-CAGGCGGTAATGGATGCCTGGGCTCAATCC--GAACAACAG---CTGAATCAACAC 424
consensus_10826#0 ACTGTCCTGATAGAACACTGCCTTTTTTCTTTTCCAAGGTTTATT-AGCATGATTAAATG 599
consensus_10826#3 ------------------------------------------------------------
consensus_10826#2 --------------------------------CCCTCGAGCCAAN-AATTCGGCACGAGG 27
consensus_10826#1 GTGGTGGGGGACGAAAACTGTTTCTATTGATTTTCATCAACTGTTCAATTTTGAAGTGAA 484
consensus_10826#0 CCCGAACAAGTATTGTGTCA-GAGAATATAAAGTTTCTCANAGTTTCAGAAATATCTCGT 658
consensus_10826#3 ------TGGGAATTGGCCCT-CAGGCCA-GAATCGGCACGAGGTTTCCTAG-TATCTCGT 51
consensus_10826#2 --CGAACAAGTATTGTGTCA-GAGAATATAAAGTTTCTCAAAGTTTCAGAAATATCTCGT 84
consensus_10826#1 ACTGAGCAGATGCTGACAGACGACAGTATAATTTATCTCCAGATTTAGCCGTAAGACGGT 544
** * * * * * *** * **
consensus_10826#0 CATACTGACCGCCACGAAGTTAAAGACGAGTTGAAATGGACAACTGAAGCGTTTCATGCT 718
consensus_10826#3 CATACTGACCGCCACGAAGTTAAAGACGAGTTGAAATGGACAACTGAAGCGTTTCATGCT 111
consensus_10826#2 CATACTGACCGCCACGAAGTTAAAGACGAGTTGAAATGGACAACTGAAGCGTTTCATGCT 144
consensus_10826#1 CAGCGAATTCTTTCTGAAGCATAACAACCGCTGCTCTAAAACCATGACCTGCACTAATCA 604
** * **** ** * * ** * * *** * * *
consensus_10826#0 CCATTAAGAAGATCGGAAACATTGTCCAGTGC--CAAGTCAA--GTGGAGAAATTACAAT 774
consensus_10826#3 CCATTAAGAAGATCGGAAACATTGTCCAGTGC--CAAGTCAA--GTGGAGAAATTACAAT 167
consensus_10826#2 CCATTAAGAAGATCGGAAACATTGTCCAGTGC--CAAGTCAA--GTGGAGAAATTACAAT 200
consensus_10826#1 GTCTTTGGATGAATGGCGAAGAGATCTTATACGGCAGGTTCGCTATGCAGAGATCGAACT 664
** ** ** ** * ** * * ** ** ** *** ** * *
consensus_10826#0 CACGACA-GATACTGTTATGAGCTTGCA-CGCCTTCGAAAATATGGCCCCTAAAACAAAA 832
consensus_10826#3 CACGACA-GATACTGTTATGAGCTTGCA-CGCCTTCGAAAATATGGCCCCTAAAACAAAA 225
consensus_10826#2 CACGACA-GATACTGTTATGAGCTTGCA-CGCCTTCGAAAATATGGCCCCTAAAACAAAA 258
consensus_10826#1 TGGGCCATGATTTTGCCTTGA--TTGCATCGCCAACGAGAATTTCTAGTTTGGTTCGATG 722
* ** *** ** *** ***** **** *** *** * * * *
consensus_10826#0 -AATATGACTTCGAAATTTTCTAATACTGTTGTAACCAATG--AAACTTGCTCTTTATC- 888
consensus_10826#3 -AATATGACTTCGAAATTTTCTAATACTGTTGTAACCAATG--AAACTTGCTCTTTATC- 281
consensus_10826#2 -AATATGACTTCGAAATTTTCTAATACTGTTGTAACCAATG--AAACTTGCTCTTTATC- 314
consensus_10826#1 TAGTGAGGTTTGCACACGCTTTTGCAATTCTGAAACCATTCTTGGATCTATTTCGAACGC 782
* * * ** * * * * * * ** ***** * * * * *
consensus_10826#0 -TACATCACATTCTGGTTCCCGGACCACTT-ACAGTCA--TTACAAGC----GATCCATT 940
consensus_10826#3 -TACATCACATTCTGGTTCCCGGACCACTT-ACAGTCA--TTACAAGC----GATCCATT 333
consensus_10826#2 -TACATCACATTCTGGTTCCCGGACCACTT-ACAGTCA--TTACAAGC----GATCCATT 366
consensus_10826#1 GTACACTTTCCTTCCCTTTTCTAACAACTTGACAGTGAGATTACCAGTTCCAGAACCAAT 842
**** * ** * ** **** ***** * **** ** ** *** *
consensus_10826#0 TTACGACAAGTAAAACGTCAAGCAGATAACCTTCGATTAAAGCTTGTTAAAGAGCGTCGT 1000
consensus_10826#3 TTACGACAAGTAAAACGTCAAGCAGATAACCTTCGATTAAAGCTTGTTAAAGAGCGTCGT 393
consensus_10826#2 TTACGACAAGTAAAACGTCAAGCAGATAACCTTCGATTAAAGCTTGTTAAAGAGCGTCGT 426
consensus_10826#1 TTCCAGCAAGGAGTCTGTGGACTTGATACCAGACTTTTCCACCATTGTGTTAATAACGAG 902
** * **** * ** * **** * * ** * * * * *
consensus_10826#0 ACAATAAGTCACGAACGATTGGTTGATCCACTCCTGTCCACAAGGCAACGCTTTGTGTAG 1060
consensus_10826#3 ACAATAAGTCACGAACGATTGGTTGATCCACTCCTGTCCACAAGGCAACGCTTTGTGTAG 453
consensus_10826#2 ACAATAAGTCACGAACGATTGGTTGATCCACTCCTGTCCACAAGGCAACGCTTTGTGTAG 486
consensus_10826#1 GGGATTTTTCAGTATATGCTGACCTTTTGTCTTCTGAA-ACCGGATACCGCCTGTTTTAA 961
** *** * ** * ** *** ** * * *** * * **
consensus_10826#0 C--TTAAATGTACATACTCTACTGATCGTACTAACTTTGTAGGTA-TATTGTAAATAG-- 1115
consensus_10826#3 C--TTAAATGTACATACTCTACTGATCGTACTAACTTTGTAAATA-TATTGTAA------ 504
consensus_10826#2 C--TTAAATGTACATACTCTACTGATCGTACTAACTTTGCCAATAATAATCTAAGAAAGT 544
consensus_10826#1 TAGCTAAACTAGAGGAATCAAATTTTGGTTTGACCATTGTATATGCTTTTTTCGAAAA-- 1019
**** * ** * * * ** * * *** * * * *
consensus_10826#0 ---------TTAACATAAAACTGTTTTTTTGTTTAAAAAAAAAGTTAAA----------- 1155
consensus_10826#3 ------------------------------------------------------------
consensus_10826#2 CATCCTCGTCTAAAGCACGGGCACGCTTTTTTTCAAAACCTGAGTCTCGAAGTATGTTTG 604
consensus_10826#1 ----CCAAGCCCCTGATGGGCTTATTTGTGGTCTGTA----------------------- 1052
consensus_10826#0 ------------------------------------------------------------
consensus_10826#3 ------------------------------------------------------------
consensus_10826#2 TTATTTTCTCCTCCATTGCTGAAACACCAGTAGACTCACAGGNCATAGCCTCTGGAGTTG 664
consensus_10826#1 ------------------------------------------------------------
consensus_10826#0 ------------------------------------------------------------
consensus_10826#3 ------------------------------------------------------------
consensus_10826#2 GTGACAATCCTTTTGTGCAACAAGTCTNNCATGTAATTTTACGTAAATGAGAAGCTATCG 724
consensus_10826#1 ------------------------------------------------------------
consensus_10826#0 ------------------------------------------------------------
consensus_10826#3 ------------------------------------------------------------
consensus_10826#2 ATTTGCCGCTAAAGTAGCTNCGATCGTTNTGTTTTTGCGAGCAACACAGACGCAGTAGTC 784
consensus_10826#1 ------------------------------------------------------------
consensus_10826#0 ------------------------------------------------------------
consensus_10826#3 ------------------------------------------------------------
consensus_10826#2 ATCCATTCTGATGCATACAGCGGTATGGATGCCTGGCTCNATCGACACAGCTGATCACCA 844
consensus_10826#1 ------------------------------------------------------------
consensus_10826#0 -----------------------------------------
consensus_10826#3 -----------------------------------------
consensus_10826#2 CGTGTGGGGGAGAAACTGNTNCTATGATCTATATTAAATAN 885
consensus_10826#1 -----------------------------------------
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| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||