These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10973#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 14 consensus length = 2183 fasta sequence [TACATCCTCCTGTTAGTGATGTTGTCAATCATGGACATTATACAGATGATGAAAATATTGGAAATCCAATCCCTTATCGAGGTGCGAAACGTATGCCTCGCGAAGCATACGGTCACCGCAGTTCTGGTGGGTCAAAGAACTGCAGTGACTGGAACAGTGATCCTAGTCTATTTGTTGAGAAGTTTTTTGTTCCTCAACATCTCATGGGTTTAGCTATAGGTGCTCGTGGTGTAAATATTCGTGCTGCAAGAGAGATTCCCGATGTAATCCGTATCGAGTCGTGGGAACCGTCCGAATACAGTGCAAGAAACAATGACCCTATCGATAATTCTGGAGATTATGGTGAAGCTGCGATGTTTGTTATAGAAGCCAAGACTCCGGAAGCTGCAAAACAAGCTCGAGCTAAACTGGAATACTCTGAGCTGTATTTAGGTGTTCCACGTCGTTATGTAGGCCGTTTGATCGGGAAAAGAACCTCAAATATTATGTCCATTATTCGTAAATCTGGTGTTGTTCACATTCATTTCGATGATCATATCGAAGGCCCTGTATCTCTCAGCGATGATAATAACCAAACTGATGTTATCAAGTATTCCCATCCAGGGCGTCCTTTAGCAAGCACAATGCGACGAGTCTTTTTGAAGGCTGGAAGTGCTCAGACATCCTCGCAACCACATACAGATGAGGAATACGGTGGATTCATACTAGCTGGCACAAGGGACTCTATCGAAAAAGCTCGTTTGTTGATCAACTTCCAAATGGATTACTTCTACGATCTTGAAAAAATGGAGAGCGAAAAGCTGGAGTTAATGCGTAGTTTATCTCATGGTGGAGTGGACTCTGGTCCAGACTACCCACCTCGTGGTACGGTAGTCGGACGTTGGGGTGACCGCGGTGGTGTTGGGAATTATGGACGTGGTGGTCGCGGACGCAGACCAGGTCGTAGTGGTCTGTTACATCCTCCTGTTAGTGATGTTGTCAATCATGGACATTATACAGATGATGAAAATATTGGAAATCCAATCCCTTATCGAGGCGCGAAACGTATGCCTCGCGAAGCATACGGTCACCGCAGTTCTGGTGGAAGAATCCCACGTCAAAGTGGAAGAGGAAGTCGGCGAATGGGAGGTTCTGGTCGCGATCCTAATTGGAATAACCACATTAACAACAATGGAGATGTCGCTGACCGTCGTCGAGGCTCGAATGATTCGGATGTCTTAGAGTCTGACAACTTACCTGACGGTTTATCATCGGAACGGGCAAACGCTGGAAAACATAACAGGATAGGACGTCATTCTCCAGCTCCAAATGGATTTTATTCTGATAGAGAACGTGGGGACGAAAGTGAGGATACCCTTAATCCTAACAACGAAAACAATTTCCCTTGTGGTGATGCGTCTTCTGAAGACGGCGGGGGTTGTTCAGTTGACAATATGCGTTCAAGACTGAATAAATATGTACATAGTCGTCGTAACAGTAAATCACGCCCCCCACGTCGCTCACATCAAGATCGTCCTCAAAATTCCGACCAATGGGATACCAATTGTCAATTCAACAACGTCGATTCATCTCTCGGTAGTCAGAAATTGCGTAGTGCTGGTGGTAATTATTCTGCCAGACAGCAGTCGGTGCAAGTAGTATACCAGGAATAGAGTTCCTTGCACATTTTTACTGGATGTTTGTGTGTACCTCTTTAAGTTGAGTTAACGAAAAAACCTTGTGTATTACATTCTTATGTCTTCATTTCTT-GTTGTTGTTCGAATATTGTTTCTTTTGTTACTTTCCTGAAGT------TATATATATATATATGGTCTTATATCAACAGTGTTGTCTGCAAACGTTATTACCAATATCCAGTCTCATCTCGTTCATTTCGTATATAAGAATACGTTACACATGTTTATACAACTTTATGATATCTCAAACCTGTGATTAGCATGTATATCTTATGTGGTTCACTAGTTTGTTCACGCTCAAATAGCAGTACTTCATTTTAACCGATTCCAGTCTTTTCATCTAGTACCAAGATTTTTAAAAAATAAAAGGACAACCACTTCAGGTTTACTCATAAGCAACTGTTGTATCTCCATTTCTATAAAGATCTGTCACTTTTTAAGAATAATCACCTTTGAACTCATTACTTATCTACCCGTAACTGCGTTTTCCCATCTAAGTGTATTAACTAG] [+] EMBL CD096517 [TACATCCTCCTGTTAGTGATGTTGTCAATCATGGACATTATACAGATGATGAAAATATTGGAAATCCAATCCCTTATCGAGGTGCGAAACGTATGCCTCGCGAAGCATACGGTCACCGCAGTTCTGGTGGGTCAAAGAACTGCAGTGACTGGAACAGTGATCCTAGTCTATTTGTTGAGAAGTTTTTTGTTCCTCAACATCTCATGGGTTTAGCTATAGGTGCTCGTGGTGTAAATATTCGTGCTGCAAGAGAGATTCCCGATGTAATCCGTATCGAGTCGTGGGAACCGTCCGAATACAGTGCAAGAAACAATGACCCTATCGATAATTCTGGAGATTATGGTGAAGCTGCGATGTTTGTTATAGAAGCCAAGACTCCGGAAGCTGCAAAACAAGCTCGAGCTAAACTGGAATACTCTGAGCTGTATTTAGGTGCTCCACGTCGTTATGTAGGCCGTTTGATCGGGAAAAGAACCTCANATATTATGTCCATTATTCGTANATCTGGTGTTGTTCACATTCATTTCGATGATCATATCGAAGGCCCTGTATCTCTCAGCGATGATAATAACCAAACTGATGn ] [+] EMBL CD064948 [ TCCCGATGTAATCCGTATCGAGTCGTGGGAACCGTCCGAATACAGTGCAAGAAACAATGACCCTATCGATAATTCTGGAGATTATGGTGAAGCTGCGATGTTTGTTATAGAAGCCAAGACTCCGGAAGCTGCAAAACAAGCTCGAGCTAAACTGGAATACTCTGAGCTGTATTTAGGTGTTCCACGTCGTTATGTAGGCCGTTTGATCGGGAAAAGAACCTCAAATATTATGTCCATTATTCGTAAATCTGGTGTTGTTCACATTCATTTCGATGATCATATCGAAGGCCCTGTATCTCTCAGCGATGATAATAACCAAACTGATGTTATCAAGTATTCCCATCCAGGGCGTCCTTTAGCAAGCACAATGCGACGAGTCTTTTTGAAGGCTGGAAGTGCTCAGACATCCTCGCAACCACATACAGATGAGGAATACGGTGGATTCATACTAGCTGGCACAAGGGACTCTATCG ] [+] EMBL CD064957 [ TCCCGATGTAATCCGTATCGAGTCGTGGGAACCGTCCGAATACAGTGCAAGAAACAATGACCCTATCGATAATTCTGGAGATTATGGTGAAGCTGCGATGTTTGTTATAGAAGCCAAGACTCCGGAAGCTGCAAAACAAGCTCGAGCTAAACTGGAATACTCTGAGCTGTATTTAGGTGTTCCACGTCGTTATGTAGGCCGTTTGATCGGGAAAAGAACCTCAAATATTATGTCCATTATTCGTAAATCTGGTGTTGTTCACATTCATTTCGATGATCATATCGAAGGCCCTGTATCTCTCAGCGATGATAATAACCAAACTGATGTTATCAAGTATTCCCATCCAGGGCGTCCTTTAGCAAGCACAATGCGACGAGTCTTTTTGAAGGCTGGAAGTGCTCAGACATCCTCGCAACCACATACAGATGAGGAATACGGTGGATTCATACTAGCTGGCACAAGGGACTCTATCGAAAAAGCTCGTTTGTTGATCAACTTCCAAATGGATTACTTCTACGATCTTGAAAAAATGGAGAGCGAAAAGCTGGAGTTAATGCGTAGTTTATCTCATGGTGGAGAGG ] [+] EMBL CD060527 [ TTGATCGGGAAAAGAACCTCAAATATTATGTCCATTATTCGTAAATCTGGTGTTGTTCACATTCATTTCGATGATCATATCGAAGGCCCTGTATCTCTCAGCGATGATAATAACCAAACTGATGTTATCAAGTATTCCCATCCAGGGCGTCCTTTAGCAAGCACAATGCGACGAGTCTTTTTGAAGGCTGGAAGTGCTCAGACATCCTCGCAACCACATACAGATGAGGAATACGGTGGATTCATACTAGCTGGCACAAGGGACTCTATCGAAAAAGCTCGTTTGTTGATCAACTTCCAAATGGATTACTTCTACGATCTTGAAAAAATGGAGAGCGAAAAGCTGGAGTTAATGCGTAGTTTATCTCATGGTGGAGTGGACTCTGGTCCAGACTATCCACCTCGTGGTACGGgcatcc ] [-] EMBL CD128835 [ ATGTCCATTATTCGTAAATCGGGTGTTGTTCACATTCATTTCGATGATCATATCGAAGGCCCTGTATCTCTCAGCGATGATAATAACCAAACTGATGTTATCAAGTATTCCCATCCAGGGCGTCCTTTAACAAGCACAATGCGACGAGTCTTTTTGAAGGCTGGAAGTGCTCAGACATCCTCGCAACCACATACAGATGAGGAATACGGTGGATTCATACTAGCTGGCACAAGGGACTCTATCGAAAAAGCTCGTTTGTTGATCAACTTCCAAATGGATTACTTCTACGATCTTGAAAAAATGGAGAGCGAAAAGCTGGAGTTAATGCGTAGTTTATCTCATGGTGGAGTGGACTCTGGTCCAGACTACCCACCTCGTGGTACGGTAGTCGGACGTTGGGGTGACCGCGGTGGTGTTGGGAATTATGGACGTGGTGGTCGCGGACGCAGACCAGGTCGTAGTGGTCTGTTACATCCTCCTGTTAGTGATGTTGTCAATCATGGACATTATACAGAT ] [+] EMBL CD153732 [ TTTAGCAAGCACAATGCGACGAGTCTTTTTGAAGGCTGGAAGTGCTCAGACATCCTCGCAACCACATACAGATGAGGAATACGGTGGATTCATATTAGCTGGCACAAGGGACTCTATCGAAAAAGCTCGTTTGTTGATCAACTTCCAAATGGATTACTTCTACGATCTTGAAAAAATGGAGAGCGAAAAGCTGGAGTTAATGCGTAGTTTATCTCATGGTGGAGTGGACTCTGGTCCAGACTACCCACCTCGTGGTACGGTAGTCGGACGTTGGGGTGACCGCGGTGGTGTTGGGAATTATGGACGTGGTGGTCGCGGACGCAGACCAGGTCGTAGTGGTCTGTTACATCCTCCTGTTAGTGATGTTGTCAATCATGGACATTATACAGATGATGAAAATATTGGAAATCCAATCCCTTATCGAGGCGCAAAACGTATGCCTCGCGAAGCATACAATCACCGCAGTTCTGGTGGAAGAATCCCACGT ] [+] EMBL CD116420 [ TATGGACGTGGTGGTCGCGGACGCAGACCAGGTCGTAGTGGTCTGTTACATCCTCCTGTTAGTGATGTTGTCAATCATGGACATTATACAGATGATGAAAATATTGGAAATCCAATCCCTTATCGAGGCGCGAAACGTATGCCTCGCGAAGCATACGGTCACCGCAGTTCTGGTGGAAGAATCCCACGTCAAAGTGGAAGAGGAAGTCGGCGAATGGGAGGTTCTGGTCGCGATCCTAATTGGAATAACCACATTAACAACAATGGAGATGTCGCTGACCGTCGTCGAGGCTCGAATGATTCGGATGTCTTAGAGTCTGACAACTTACCTGACGG ] [+] EMBL CD134724 [ ATGAAAATATTGGAAATCCAATCCCTTATCGAGGCGCGAAACGTATGCCTCGCGAAGCATACGGTCACCGCAGTTCTGGTGGAAGAATCCCACGTCAAAGTGGAAGAGGAAGTCGGCGAATGGGAGGTTCTGGTCGCGATCCTAATTGGAATAACCACATTAACAACAATGGAGATGTCGCTGACCGTCGTCGAGGCTCGAATGATTCGGATGTCTTAGAGTCTGACAACTTACCTGACGGTTTATCATCGGAACGGGCAAACGCTGGAAAACATAACAGGATAGGACGTCATTCTCCAGCTCCAAATGGATTTTATTCTGATAGAGAACGTGGGGACGAAAGTGAGGATACCCTTAATCCTAACAACGAAAACAATTTCCCTTGTGGTGATGCGTCTTCTGAAGACGGCGGGGGTTGTTCAGTTGACAATATGCGTTCAAGACTGAATAAATATGTACATAGTCGTCGTAACAGTAAATCACGCCCCCCACGTCGCTCACATCAAGATCGTCCTCAAAATTCCGACCAATGGGATACCAATTGTCAATTC ] [+] EMBL CD134756 [ ATGAAAATATTGGAAATCCAATCCCTTATCGAGGCGCGAAACGTATGCCTCGCGAAGCATACGGTCACCGCAGTTCTGGTGGAAGAATCCCACGTCAAAGTGGAAGAGGAAGTCGGCGAATGGGAGGTTCTGGTCGCGATCCTAATTGGAATAACCACATTAACAACAATGGAGATGTCGCTGACCGTCGTCGAGGCTCGAATGATTCGGATGTCTTAGAGTCTGACAACTTACCTGACGGTTTATCATCGGAACGGGCAAACGCTGGAAAACATAACAGGATAGGACGTCATTCTCCAGCTCCAAATGGATTTTATTCTGATAGAGAACGTGGGGACGAAAGTGAGGATACCCTTAATCCTAACAACGAAAACAATTTCCCTTGTGGTGATGCGTCTTCTGAAGACGGCGGGGGTTGTTCAGTTGACAATATGCGTTCAAGACTGAATAAATATGTACATAGTCGTCGTAACAGTAAATCACGCCCCCCACGTCGCTCACATCAAGATCGTCCTCAAAATTCCGACCAATGGGATACCAATTGTCAATTC ] [+] EMBL AI975626 [ ATAACCACATTAACAACAATGGAGATGTCGCTGACCGTCGTCGAGGCTCGAATGATTCGGATGTCTTAGAGTCTGACAACTTACCTGACGGTTTATCATCGGAACGGGCAAACGCTGGAAAACATAACAGGATAGGACGTCATTCTCCAGCTCCAAATGGATTTTATTCTGATAGAGAACGTGGGGACGAAAGTGAGGATACCCTTAATCCTAACAACGAAAACAATTTCCCTTGTGGTGATGCGTCTTCTGAAGACGGCGGGGGTTGTTCAGTTGACAATATGCGTTCAAGACTGAATAAATATGTACATAGTCGTCGTAACAGTAAATCACGCCCCCCACGTCGCTCACATCAAGATCGTCCTCAAAATTCCGACCAATGGGATACCAATTGTCAATTCAACAACGTCGATTCATCTCTCGGTAGTCAGAAATTGCGTAGTGCTGGTGGTAATTATTCTGCCAGACAGCAGTCGGTGCAAGTAGTATACCAGGAATAGAGT ] [+] EMBL AI977612 [ TAATCCTAACAACGAAAACAATTTCCCTTGTGGTGATGCGTCTTCTGAAGACGGCGGGGGTTGTTCAGTTGACAATATGCGTTCAAGACTGAATAAATATGTACATAGTCGTCGTAACAGTAAATCACGCCCCCCACGTCGCTCACATCAAGATCGTCCTCAAAATTCCGACCAATGGGATACCAATTGTCAATTCAACAACGTCGATTCATCTCTCGGTAGTCAGAAATTGCGTAGTGCTGGTGGTAATTATTCTGCCAGACAGCAGTCGGTGCAAGTAGTATACCAGGAATAGAGTTCCTTGCACATTTTTACTGGATGTTTGTGTGTACCTCTTTAAGTTGAGTTAACGAAAAAACCTTGTGTATTACATTCTTATGTCTTCATTTCTT GTTGTTGTTCGAATATTGTTTCTTTTGTTACTTTCCTGAAGT TATATATATATATATGGNCTTATATCAACAGTGTTGTCTGCAAACGTTATTACCAATATCCAGTCTCATCTCGTTCATTTCGTATATAAGAATACGTTACACATGTTTATACAACTTTATGATATCTCA ] [+] EMBL AI976970 [ ACAACGAAAACAATTTCCCTTGTGGTGATGCGTCTTCTGAAGACGGCGGGGGTTGTTCAGTTGACAATATGCGTTCAAGACTGAATAAATATGTACATAGTCGTCGTAACAGTAAATCACGCCCCCCACGTCGCTCACATCAAGATCGTCCTCAAAATTCCGACCAATGGGATACCAATTGTCAATTCAACAACGTCGATTCATCTCTCGGTAGTCAGAAATTGCGTAGTGCTGGTGGTAATTATTCTGCCAGACAGCAGTCGGTGCAAGTAGTATACCAGGAATAGAGTTCCTTGCACATTTTTACTGGATGTTTGTGTGTACCTCTTTAAGTTGAGTTAACGAAAAAACCTTGCGTATTACATTCTTATGTCTTCATTTCTTGGATG TGCTCGAATATTGTTTCTTTTGTTACTTTCCTGAAGN GATATATATATATATatata ] [+] EMBL AI110938 [ GTCGTCGTAACAGTAAATCACGCCCCCCACGTCGCTCACATCAAGATCGTCCTCAAAATTCCGACCAATGGGATACCAATTGTCAATTCAACAACGTCNATTCATCTCTCGGTAGTCANAAATTGCGTAGTGCTGGTGGTNATTAATCTGCCAAACAGCAGTCGGTGCAAGTAGTATACCAGGAATAGAGTTCCTTGCACATTTTTACTGGATGCTTGTGTGTACCTCTTTAAGTTGAGTTAACNAAAAAACCTTGTGTATTACATTCTTATGTCTNCATTTCTT GTTGTTGTTCGAATATTGTTTCTTTTGTTACTTTCCTGAAGT TATATATATATATATGGTCTTATATCAACAGTGTTGTCTGCAAACGTTATTACCAATATCCAGTCTCATC ] [+] EMBL AW016951 [ CGGTAGTCAGAAATTGCGTAGTGCTGGTGGTAATTATTCTGCCAGACAGCAGTCGGTGCAAGTAGTATACCAGGAATAGAGTTCCTTGCACATTTTTACTGGATGTTTGTGTGTACCTCTTTAAGTTGAGTTAACGAAAAAACCTTGTGTATTACATTCTTATGTCTTCATTTCTT GTTGTTGTTCGAATATTGTTTCTTTTGTTACTTTCCTGAAGTTATATATATATATATATATATAGTCTTATATCAACAGTGTTGTCTGCAAACGTTATTACCAATATCCAGTCTCATCTCGTTCATTTCGTATATAAGAATACGTTACACATGTTTATACAACTTTATGATATCTCAAACCTGTGATTAGCATGTATATCTTATGTGGTTCACTAGTTTGTTCACGCTCAAATAGCAGTACTTCATTTTAACCGATTCCAGTCTTTTCATCTAGTACCAAGATTTTTAAAAAATAAAAGGACAACCACTTCAGGTTTACTCATAAGCAACTGTTGTATCTCCATTTCTATAAAGATCTGTCACTTTTTAAGAATAATCACCTTTGAACTCATTACTTATCTACCCGTAACTGCGTTTTCCCATCTAAGTGTATTAACTAG] consensusID : consensus_10973#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 1015 fasta sequence [NGGTCGCAGTTACGGGTAGATAAGTAATGAGTTCAAAGGTGATTATTCTTAAAAAGTGACAGATCTTTATAGAAATGGAGATGAAACTAATAGTAAACCGGAAGTCGAACTCATACTGGATGATCAGCTAAATTATCTCCCTATTCCATCTTGGTGGCCTTGCCGCGTTGTCAAGATTCGAGATGATGTCGCGGTGGTGAAGTTAAATGTAACCCCACCGGCCGATGCAACGCCCTCAGAGATTTCACTTTGTACACAGCTTTCTACCGTCACCGAGATCGTAAGTCGTAAGTCCCTACGTCAGCCCAGTGATGATTGCCCGTGTCTGTCACCTGATATCATCCACCGGCATCGTATCGAAATTCCAAAAGAATTGGCAGATTTTGCTTCTGATCCTTCTGTCCACCATGACTTTTTGCGCCATTGTGGTGGCCCTGTAAG-CCTGTACTACGACAATGAGTCTTCCTGTTTGGTCGTGTTAACGACAGACCCTGTAACAGCAAAGAATGTTGCCTTGTTGGAAGATACTCATTTAAGGATGTTGCGCCAAAAATGGGCCCTAACTCGAAGTCTTCGGCAAACTATTCGAAATCTTGAGGTCAACC-GAGGACCAGATGTATCACGACCAGGTGGGTCAAAGAACTGCAGTGACTGGAACAGTGATCCTAGTCTATTTGTTGAGAAGTTTTTTGTTCCTCAACATCTCATGGGTTTAGCTATAGGTGCTCGTGGTGTAAATATTCGTGCTGCAAGAGAGATTCCCGATGTAATCCGTATCGAGTCGTGGGAACCGTCCGAATACAGTGCAAGAAACAATGACCCTATCGATAATTCTGGAGATTATGGTGAAGCTGCGATGTTTGTTATAGAAGCCAAGACTCCGGAAGCTGCAAAACAAGCTCGAGCT-AAACTGGAATACTCTGAGCTGTATTTAGGTGTTCCACGTCGTTATGTAGGCCGTTTGATCGGGAA-AAGAACCTCAAATATTATGTCCATTATTCGTAAATCTGGTGTA] [-] EMBL CD096606 [NGGTCGCAGTTACGGGTAGATAAGTAATGAGTTCAAAGGTGATTATTCTTAAAAAGTGACAGATCTTTATAGAAATGGAGATGAAACTAATAGTAAACCGGAAGTCGAACTCATACTGGATGATCAGCTAAATTATCTCCCTATTCCATCTTGGTGGCCTTGCCGCGTTGTCAAGATTCGAGATGATGTCGCGGTGGTGAAGTTAAATGTAACCCCACCGGCCGATGCAACGCCCTCAGAGATTTCACTTTGTACACAGCTTTCTACCGTCACCGAGATCGTAAGTCGTAAGTCCCTACGTCAGCCCAGTGATGATTGCCCGTGTCTGTCACCTGATATCATCCACCGGCATCGTATCGAAATTCCAAAAGAATTGGCAGATTTTGCTTCTGATCCTTCTGTCCACCATGACTTTTTGCGCCATTGTGGTGGCCCTGTAAG CCTGTACTACGACAATGAGTCTTCCTGTTTGGTCGTGTTAACGACAGACCCTGTAACAGCAAAGAATGTTGCCTTGTTGGAAGATACTCATTTAAGGATGTTG ] [+] EMBL CD130417 [ GGAAGTCGAACTCATACTGGATGATCAGCTAAATTATCTCCCTATTCCATCTTGGTGGCCTTGCCGCGTTGTCAAGATTCGAGATGATGTCGCGGTGGTGAAGTTAAATGTAACCCCACCGGCCGATGCAACGCCCTCAGAGATTTCACTTTGTACACAGCTTTCTACCGTC ] [-] EMBL CD130396 [ GAAGTCGAACTCATACTGGATGATCAGCTAAATTATCTCCCTATTCCATCTTGGTGGCCTTGCCGCGTTGTCAAGATTCGAGATGATGTCGCGGTGGTGAAGTTAAATGTAACCCCACCGGCCGATGCAACGCCCTCAGAGATTTCACTTTGTACACAGCTTTCTACCGTCA ] [+] EMBL CD112231 [ GTAAGTCCTGTACTACGACAATGAGTCTTCCTGTATGGTCGTGTTAGCGACAGACCCTGTAACAGCAAAGAATGTTGCCTTGTTGGAAGATACTCATTTAAGGATGTTGCGCCAAAAATGGGCCCTAACTCGAAGTCTTCGGCAAACTATTCGAAATCTTGAGGTCAACC GAGGACCAGATGTATCACGACCAGGTGGGTCAAAGGACTGCAGTGACTGGAACAGTGATCCTAGTCTATTTGTTGAGAAGTTTTTTGTTCCTCAACATCTCATGGGTTTAGCTATAGGTGCTCGTGGTGTAAATATTCGTGCTGCAAGAGAGATTCCCGATGTAATCCGTATCGAGTCGTGGGAACCGTCCGAATACAGTGCAAGAAACAATGACCCTATCGATAATTCTGGAGATTATGGTGAAGCTGCGATGTTTGTTATAGAAGCCAAGACTCCGGAAGCTG AAAAC ] [+] EMBL CD112124 [ TAAG CCTGTACTACGACAATGAGTCTTCCTGTTTGGTCGTGTTAACGACAGACCCTGTAACAGCAAAGAATGTTGCCTTGTTGGAAGATACTCATTTAAGGATGTTGCGCCAAAAATGGGCCCTAACTCGAAGTCTTCGGCAAACTATTCGAAATCTTGAGGTCAACC GAGGACCAGATGTATCACGACCAGGTGGGTCAAAGAACTGCAGTGACTGGAACAGTGATCCTAGTCTATTTGTTGAGAAGTTTTTTGTTCCTCAACATCTCATGGGTTTAGCTATAGGTGCTCGTGGTGTAAATATTCGTGCTGCAAGAGAGATTCCCGATGTAATCCGTATCGAGTCGTGGGAACCGTCCGAATACAGTGCAAGAAACAATGACCCTATCGATAATTCTGGAGATTATGGTGAAGCT ] [+] EMBL CD112126 [ TAAG CCTGTACTACGACAATGAGTCTTCCTGTTTGGTCGTGTTAACGACAGACCCTGTAACAGCAAAGAATGTTGCCTTGTTGGAAGATACTCATTTAAGGATGTTGCGCCAAAAATGGGCCCTAACTCGAAGTCTTCGGCAAACTATTCGAAATCTTGAGGTCAACC GAGGACCAGATGTATCACGACCAGGTGGGTCAAAGAACTGCAGTGACTGGAACAGTGATCCTAGTCTATTTGTTGAGAAGTTTTTTGTTCCTCAACATCTCATGGGTTTAGCTATAGGTGCTCGTGGTGTAAATATTCGTGCTGCAAGAGAGATTCCCGATGTAATCCGTATCGAGTCGTGGGAACCGTCCGAATATAGTGCAAGAAACAATGACCCTATCGATAATTCTGGAGATTATGGTGAAGCTGCGATGTTTGTTATAGAAGCCAAGACTCCGGAAGCTGCAAAACAAGCTCGAGCT AAACTGGAAT ] [+] EMBL CD064841 [ ACGACAATGAGTCTTCCTGTTTGGTCGTGTTAACGACAGACCCTGTAACAGCAAAGAATGTTGCCTTGTTGGAAGATACTCATTTAAGGATGTTGCGCCAAAAATGGGCCCTAACTCGAAGTCTTCGGCAAACTATTCGAAATCTTGAGGTCAACC GAGGACCAGATGTATCACGACCAGGTGGGTCAAAGAACTGCAGTGACTGGAACAGTGATCCTAGTCTATTTGTTGAGAAGTTTTTTGTTCCTCAACATCTCATGGGTTTAGCTATAGGTGCTCGTGGTGTAAATATTCGTGCTGCAAGAGAGATTCCCGATGTAATCCGTATCGAGTCGTGGGAACCGTCCGAATACAGTGCAAGAAACAATGACCCTATCGATAATTCTGGAGATTATGGTGAAGCTGCGATGTTTGTTATAGAAGCCAAGACTCCGGAAGCTGCAAAACAAGCTCGAGCT AAACTGGAATACTCTGAGCTGTATTTAGGTGTTCCACGTCGTTATGTAGGCCGTTTGATCGGGAA AAGAACCTCANATATTATGTCCATTATTCGTAAAT ] [+] EMBL CD121040 [ AATGAGTCTTCCTGTTTGGTCGTGTTAACGACAGACCCTGTAACAGCAAAGAATGTTGCCTTGTTGGAAGATACTCATTTAAGGATGTTGCGCCAAAAATGGGCCCTAACTCGAAGTCTTCGGCAAACTATTCGAAATCTTGAGGTCAACC GAGGACCAGATGTATCACGACCAGGTGGGTCAAAGAACTGCAGTGACTGGAACAGTGATCCTAGTCTATTTGTTGAGAAGTTTTTTGTTCCTCAACATCTCATGGGTTTAGCTATAGGTGCTCGTGGTGTAA ] [-] EMBL CD064753 [ AACTCGAAGTCTTCGGCAAACTATTCGAAATCTTGAGGTCAACC GAGGACCAGATGTATCACGACCAGGTGGGTCAAAGAACTGCAGTGACTGGAACAGTGATCCTAGTCTATTTGTTGAGAAGTTTTTTGTTCCTCAACATCTCATGGGTTTAGCTATAGGTGCTCGTGGTGTAAATATTCGTGCTGCAAGAGAGATTCCCGATGTAATCCGTATCGAGTCGTGGGAACCGTCCCAATACAGTGCAAGAAACAATGACCCTATCGATAATTCTGGAGATTATGGTGAAGCTGCGATGTTTGTTATAGAAGCCAAGACTCCGGAAGCTGCAAAACAAGCTCGAGCT AAACTGGAATACTCTGAGCTGTATTTAGGTGTTCCACGTCGTTATGTAGGCCGTTTGATCGGGAA AAGAACCTCAAATATTATGTCCATTATTCGTAAATCTGGT ] [+] EMBL CD060854 [ AACCAGAGGACCAGATGTATCACGACCAGGTGGGTCAAAGAACTGGAGTGACTGGAACAGTGATCCTAGTCTATTTGTTGAGAAGTTTTTTGTTCCTCAACATCTCATGGGTTTAGCTATAGGTGCTCGTGGTGTAAATATTCGTGCTGCAAGAGAGATTCCCGATGTAATCCGTATCGAGTCGTGGGAACCGTCCGAATACAGTGCAAGAAACAATGACCCTATCGATAATACTGGAGATTATGGTGAAGCTGCGATGTTTGTTATAGAAGCCAAGACTCCGGACGCTGCAAAACAAGCTCGAGCTAAAACTGGAATACTCTGAGCTGTATTAAGGTGTACCACGTCGTTATGTAGGCCGTTAGATCGGGAACAAGAACCTCAAATATTATGTCCATTATTCGTAAATCTGGTGTA] consensusID : consensus_10973#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 556 fasta sequence [GGATCAGAAGCAAAATCTGCCAATTCTTTTGGAATTTCGATACGATGCCGGTGGATGATATCAGGTGACAGACACGGGCAATCATCACTGGGCTGACGTAGGGACTTACGACTTACGATCTCGGTGACGGTAGAAAGCTGTGTTCAAAGTGAAATCTCTGAGGGCGTTGCATCGGCCGGTGGGGTTACATTTAACTTCACCACCGCGACATCATCTCGAATCTTGACAACGCGGCAAGGCCACCAAGATGGAATAGGGAGATAATTTAGCTGATCATCCAGTATGAGTTCGACTTCCGGTTTACTATTAGTTTCATCTCCCCAACGACCAGGCAGTGTAATTGTATTACTAGAGGAACTTGGAGTCTGATCAGTCGCGATAGAAAATAGGGCTTCCCCGCTTTGTCCAGGATGAACATCCCTTTCAGAGGTTGGGGGTAGTCGCACATTTTTGATCGGAACCTGTTCCTCTTCATTCTTTTCCGGGTAGAAGACAATCACATTTTCGTCAACTACGTTGCGCAGGACAGCTTTTATGTATTGATTTAAACGTCCCT] [+] EMBL CD169490 [GGATCAGAAGCAAAATCTGCCAATTCTTTTGGAATTTCGATACGATGCCGGTGGATGATATCAGGTGACAGACACGGGCAATCATCACTGGGCTGACGTAGGGACTTACGACTTACGATCTCGGTGACGGTAGAAAGCTGTGTTCAAAGTGAAATCTCTGAGGGCGTTGCATCGGCCGGTGGGGTTACATTTAACTTCACCACCGCGACATCATCTCGAATCTTGACAACGCGGCAAGGCCACCAAGATGGAATAGGGAGATAATTTAGCTGATCATCCAGTATGAGTTCGACTTCCGGTTTACTATTAGTTTCATCTCCCCAACGACCAGGCAGTGTAATTGTATTACTAGAGGAACTTGGAGTCTGATCAGTCGCGATAGAAAATAGGGCTTCCCCGCTTTGTCCAGGATGAACATCCCTTTCAGAGGTTGGGGGTAGTCGCACATTTTTGATCGGAACCTGTTCCTCTTCATTCTTTTCCGGGTAGAAGACAATCACATTTTCGTCAACTACGTTGCGCAGGACAGCTTTTATGTATTGATTTAAACGTCCCT] [+] EMBL CD169449 [GGATCAGAAGCAAAATCTGCCAATTCTTTTGGAATTTCGATACGATGCCGGTGGATGATATCAGGTGACAGACACGGGCAATCATCACTGGGCTGACGTAGGGACTTACGACTTACGATCTCGGTGACGGTAGAAAGCTGTGTTCAAAGTGAAATCTCTGAGGGCGTTGCATCGGCCGGTGGGGTTACATTTAACTTCACCACCGCGACATCATCTCGAATCTTGACAACGCGGCAAGGCCACCAAGATGGAATAGGGAGATAATTTAGCTGATCATCCAGTATGAGTTCGACTTCCGGGTTACTATTAGTTc ] [-] EMBL CD192362 [ TTGACAACGCGGCAAGGCCACCAAGATGGAATAGGGAGATAATTTAGCTGATCATCCAGTATGAGTTCGACTTCCGGTTTACTATTAGTTTCATCTCCCCAACGACCAGGCAGTGTAATTGTATTACTAGAGGAACTTGGAGTCTGATCAGTAGCGATAGAAAATAGGGCTTCCCCGCTTTGTCCAGGATGAACATCCCTTTCAGA ] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_10973#0 TACATCCTCCTGTTAGTGATGTTGTCAATCATGGACATTATACAGATGATGAAAATATTG 60 consensus_10973#1 ------------------------------------------------------------ consensus_10973#2 ------------------------------------------------------------ consensus_10973#0 GAAATCCAATCCCTTATCGAGGTGCGAAACGTATGCCTCGCGAAGCATACGGTCACCGCA 120 consensus_10973#1 ------------------------------------------------------------ consensus_10973#2 ------------------------------------------------------------ consensus_10973#0 GTTCTGGTGGGTCAAAGAACTGCAGTGACTGGAACAGTGATCCTAGTCTATTTGTTGAGA 180 consensus_10973#1 ------------------------------------------------------------ consensus_10973#2 ------------------------------------------------------------ consensus_10973#0 AGTTTTTTGTTCCTCAACATCTCATGGGTTTAGCTATAGGTGCTCGTGGTGTAAATATTC 240 consensus_10973#1 ------------------------------------------------------------ consensus_10973#2 ------------------------------------------------------------ consensus_10973#0 GTGCTGCAAGAGAGATTCCCGATGTAATCCGTATCGAGTCGTGGGAACCGTCCGAATACA 300 consensus_10973#1 ------------------------------------------------------------ consensus_10973#2 ------------------------------------------------------------ consensus_10973#0 GTGCAAGAAACAATGACCCTATCGATAATTCTGGAGATTATGGTGAAGCTGCGATGTTTG 360 consensus_10973#1 ------------------------------------------------------------ consensus_10973#2 ------------------------------------------------------------ consensus_10973#0 TTATAGAAGCCAAGACTCCGGAAGCTGCAAAACAAGCTCGAGCTAAACTGGAATACTCTG 420 consensus_10973#1 ------------------------------------------------------------ consensus_10973#2 ------------------------------------------------------------ consensus_10973#0 AGCTGTATTTAGGTGTTCCACGTCGTTATGTAGGCCGTTTGATCGGGAAAAGAACCTCAA 480 consensus_10973#1 ------------------------------------------------------------ consensus_10973#2 ------------------------------------------------------------ consensus_10973#0 ATATTATGTCCATTATTCGTAAATCTGGTGTTGTTCACATTCATTTCGATGATCATATCG 540 consensus_10973#1 ------------------------------------------------------------ consensus_10973#2 ------------------------------------------------------------ consensus_10973#0 AAGGCCCTGTATCTCTCAGCGATGATAATAACCAAACTGATGTTATCAAGTATTCCCATC 600 consensus_10973#1 ------------------------------------------------------------ consensus_10973#2 ------------------------------------------------------------ consensus_10973#0 CAGGGCGTCCTTTAGCAAGCACAATGCGACGAGTCTTTTTGAAGGCTGGAAGTGCTCAGA 660 consensus_10973#1 ------------------------------------------------------------ consensus_10973#2 ------------------------------------------------------------ consensus_10973#0 CATCCTCGCAACCACATACAGATGAGGAATACGGTGGATTCATACTAGCTGGCACAAGGG 720 consensus_10973#1 ------------------------------------------------------------ consensus_10973#2 ------------------------------------------------------------ consensus_10973#0 ACTCTATCGAAAAAGCTCGTTTGTTGATCAACTTCCAAATGGATTACTTCTACGATCTTG 780 consensus_10973#1 ------------------------------------------------------------ consensus_10973#2 ------------------------------------------------------------ consensus_10973#0 AAAAAATGGAGAGCGAAAAGCTGGAGTTAATGCGTAGTTTATCTCATGGTGGAGTGGACT 840 consensus_10973#1 ------------------------------------------------------------ consensus_10973#2 ------------------------------------------------------------ consensus_10973#0 CTGGTCCAGACTACCCACCTCGTGGTACGGTAGTCGGACGTTGGGGTGACCGCGGTGGTG 900 consensus_10973#1 ------------------------------------------------------------ consensus_10973#2 ------------------------------------------------------------ consensus_10973#0 TTGGGAATTATGGACGTGGTGGTCGCGGACGCAGACCAGGTCGTAGTGGTCTGTTACATC 960 consensus_10973#1 -------------------NGGTCGCAGTTACGGGTAGATAAGTAATGAGTTCAAAGGTG 41 consensus_10973#2 ------------------------------------------------------------ consensus_10973#0 CTCCTGTTAGTGATGTTGTCAATCATGGACATTATACAGATGATGAAAATATTGGAAATC 1020 consensus_10973#1 ATTATTCTTAAAAAGTGACAGATCTT------TATAGAAATGGAGATGAAACTAATAGT- 94 consensus_10973#2 ------------------------------------------------------------ consensus_10973#0 CAATCCCTTATCGAGGCGCGAAACGTATGCCTCGCGAAGCATACGGTCACCGCAGTTCTG 1080 consensus_10973#1 -AAACCGGAAGTCGAACTCATACTGGATGATCAGCTAAATTATCTCCCTATTCCATCTTG 153 consensus_10973#2 ------------------------GGATCAGAAGCAAAATCTGC--------CAATTCTT 28 * ** ** ** * * * * consensus_10973#0 GTGGAAGAATCCCAC-GTCAAAGTGGAAGAGGAAGTCGGCGAATGGGAGGTTCTGGTCGC 1139 consensus_10973#1 GTGGCCTTGCCGCGTTGTCAAGATTCGAGATGATGTCG-CGGTGGTGAAGTT-------- 204 consensus_10973#2 TTGGAATTTCGATAC------GATGCCGGTGGATGATATCAGGTGACAGACACGGG---C 79 *** * * ** * * * * consensus_10973#0 GATCCTAATTGGAATAACCACATTAACAACAATGGA-GATGTCGCTGACCGTCGTCGAGG 1198 consensus_10973#1 AAATGTAACCCCACCGGCCGATGCAACGCCCTCAGA-GATTTCACT--TTGTACACAGCT 261 consensus_10973#2 AATCATCACTGGGCTGACGTAGGGACTTACGACTTACGATCTCGGTGACGGTAGAAAGCT 139 * * * * * * * *** ** * ** consensus_10973#0 CTCGAATGATTCGGATGTCTTAGAGTCTGACAACTTACCTGACGGTTTATCATCGGAACG 1258 consensus_10973#1 TTCTACCGTCACCGAGATCGTAAGTCGTAAGTCCCTAC--GTCAGCCCAGT--------- 310 consensus_10973#2 GTGTTCAAAGTGAAATCTCTGAGGGCGTTGCA-TCGGCCGGTGGGGTTACA--------- 189 * * ** * * * * * * consensus_10973#0 GGCAAACGCTGGAAAACATAACAGGATAGGACGTCATTCTCCAGCTCCAAATGGATTTTA 1318 consensus_10973#1 GATGATTGCCCGTGTCTGTCACCTGATA-----TCATCCACCGGCATCGTATCGA---AA 362 consensus_10973#2 --TTTAACTTCACCACCGCGACATCATC-----TCGAATCTTGACAACGCGGCAAGGCCA 242 ** ** ** * * * * consensus_10973#0 TTCTGATAGAGAACGTGGGGACGAAAGTGAGGATACCCTTAATCCTAACAACGAAAACAA 1378 consensus_10973#1 TTCCAAAAGAA----TTGGCA-------GATTTTGCTTCTGATCCTTCTGTCCACCATGA 411 consensus_10973#2 CCAAGATGGAA----TAGGGA-------GATAATTTAGCTGATC-----ATCCAGTATGA 286 * ** * ** * ** * * *** * * * * consensus_10973#0 TTTCCCTTGTGGTGATGCGTCTTCTGAAGACGGCGGGGGTTGTTCAGTTGACAATATGCG 1438 consensus_10973#1 CTTTTTGCGCCATTGTGGTGGCCCTGTAAGC--------CTGTACTAC-GACAATGAGTC 462 consensus_10973#2 GTTCGACTTCCGGTTTACTATTAGTTTCATCTCC-----CCAACGACCAGGCAGTGTAAT 341 ** * * * * ** * consensus_10973#0 TTCAAGACTGAATAAATATGTACATAGTC--GTCGTAACAGTAAATCACGCC-CCCCACG 1495 consensus_10973#1 TTCCTGTTTGGTCGTGT-TAACGACAGAC--CCTGTAACAGCAAAGAATGTT-GCCTTGT 518 consensus_10973#2 TGTATTACTAGAGGAACTTGGAGTCTGATCAGTCGCGATAGAAAATAGGGCTTCCCCGCT 401 * * * * * * ** *** * ** consensus_10973#0 TCGCTCAC-ATCAAGATCGTCCTCAAAATTCCGAC-CAATGGGATACCAATTGTCAATTC 1553 consensus_10973#1 TGGAAGAT-AC-----TCATTTAAGGATGTTGCGC-CAAAAATGGGCC-----CTAACTC 566 consensus_10973#2 TTGTCCAGGATGAACATCCCTTTCAGAGGTTGGGGGTAGTCGCACATTTTTGATCGGAAC 461 * * * * ** * * * * consensus_10973#0 AACAACGTCGATTCATCTCTCGGTAGTCAGAAATTG-CGTAGTGCTGGTGGTAATTATTC 1612 consensus_10973#1 GAAGTCTTCGGCAAACTATTCGAAATCTTGAGGTCAACCGAGGACCAGATGTA-TCA--C 623 consensus_10973#2 CTGTTCCTC--TTCATTCTTTTCCGGGTAGAAGACAATCACATTTTCGT--CAACTA--- 514 * ** * * ** * * * consensus_10973#0 TGCCAGACAGCAGTCGGTGCAAGTAGTATACCAGGAATAGAGTTCCTTGCACATTTTTAC 1672 consensus_10973#1 GACCAGGTGG--GTCAAAG-AACTGCAGTGACTGGAACAGTGATCCTAGTCTATTTGTTG 680 consensus_10973#2 CGTTGCGCAG--GACAGCTTTTATGTATTGATTTAAAC---GTCCCT------------- 556 * * * * * ** * *** consensus_10973#0 TGGATGTTTGTGTGTACCT-CTTTAAGTTGAGTTAACGAAAAAACCTTGTGTATTACATT 1731 consensus_10973#1 AGAAGTTTTTTGTTCCTCAACATCTCATGGGTTTAGCTATAGGTGCTCGTGGTGTAAATA 740 consensus_10973#2 ------------------------------------------------------------ consensus_10973#0 CTTATGTCTTCAT-----TTCTTGTTGTTGTTCGAATATTGTTTCTTTTGTTACTTTCCT 1786 consensus_10973#1 TTCGTGCTGCAAGAGAGATTCCCGATGTAATCCG--TATCGAGTCGTGGGA-ACCGTCCG 797 consensus_10973#2 ------------------------------------------------------------ consensus_10973#0 GAAGTTATATATATATATATGGTCTTATATCAACAGTGTTGTCTGCAAACGTTATTACCA 1846 consensus_10973#1 AATACAGTGCAAGAAACAATGACCCTA--TCGATAAT----TCTGGAGA--TTATGGTGA 849 consensus_10973#2 ------------------------------------------------------------ consensus_10973#0 ATATCCAGTCTCATCTCGTTCATTTCGTATATAAGAATACGTTACACATGTTTATACAAC 1906 consensus_10973#1 AGCTGCGATGTTTGTTATAGAAGCCAAGACTCCGGAAGCTGCAAAACAAGCTCGAGCTAA 909 consensus_10973#2 ------------------------------------------------------------ consensus_10973#0 TTTATGATATCTCAAACCTGTGATTAGCATGTATATCTTATGTGGTTCACTAGTTTGTTC 1966 consensus_10973#1 ACTGGAATA-CTCTGAGCTGTATTTAG-----GTGTTCCACGTCGTTATGTAGGCCGTT- 962 consensus_10973#2 ------------------------------------------------------------ consensus_10973#0 ACGCTCAAATAGCAGTACTTCATTTTAACCGATTCCAGTCTTTTCATCTAGTACCAAGAT 2026 consensus_10973#1 -TGATCGGGAAA-AGAACCTCAAATATTATGTCCATTATTCGTAAATCTGGTGTA----- 1015 consensus_10973#2 ------------------------------------------------------------ consensus_10973#0 TTTTAAAAAATAAAAGGACAACCACTTCAGGTTTACTCATAAGCAACTGTTGTATCTCCA 2086 consensus_10973#1 ------------------------------------------------------------ consensus_10973#2 ------------------------------------------------------------ consensus_10973#0 TTTCTATAAAGATCTGTCACTTTTTAAGAATAATCACCTTTGAACTCATTACTTATCTAC 2146 consensus_10973#1 ------------------------------------------------------------ consensus_10973#2 ------------------------------------------------------------ consensus_10973#0 CCGTAACTGCGTTTTCCCATCTAAGTGTATTAACTAG 2183 consensus_10973#1 ------------------------------------- consensus_10973#2 ------------------------------------- |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||