These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10974#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 22 consensus length = 996 fasta sequence [GGCAGCTGACTTCA-TA-CCGCAGCGCCTGCTCCTGATATGTCTCTCCGCTATTCGAACGATTCTAATTTTGTGTTCGATGATGCTTCATATAACGATCTGGAACTAGTTCACTTTCGTCTTACTGATTCTGCCCTGAAAGATATTGAGCAACTCGCTAGCACTCTAGGAAACCACAGCTTTAGCATTACGTTCAGTGGGTCCGAAGGAGTAATGTTCTATTATATAATTATTTCACTTCCGTAGTCTTTTATTGTTCCTATCGGGAAAAACAGCAGCAAATTTACATTCAGTACCTCAAGCTTAACAAGTACTCACGATGAATCTTTTAATTGCTTGCGCACCAAAGGAGTTTCAACTAATTGTCTGGGAAAGATGGTCTCCAGAATCACTGTCAACGCTAAGGAGGATAGCTTCTCAGCGGCTAAGGAGCGAATGACACAATTAGAAGACGAAAATAAAAAGTCTCAAACAAAAGAAATCAAATCTGCCAAATCCATGGCTTCAAGAACAGCAGTACCTCAATCCGCTCACAAACAAGGCAGTCATGGTGTAAATTTAAAGGGAAAGGGAAATGAAGTTTCACCTCAGAACATAGATTTCCCTAATGTAGCCAATCGAGTTCAGTCACAGAATCCTGTTGGTTGTGGTCCCAGTCCTCCATTACCTAACCCAGATGTTTTGGCACGCTCACTGAGAGAACGCATTATTCACATACTGGCATTACGGC-C-TTATCAGCGCCCCGAATTATTATTACGGTTGTCCCGTGATGGCTTGTCGCATACCCAGAAAGAGCAAATATCCGACATCTTGTCGTCAGTCGGTCGTGTTGGAAGGCAATCGGCATACTACCTTATACCGTCTGTGGTGTCAGAATTAGATGCCAACTGGCCAGGTTATAC-T-GGTGCTGAGAGAAGACGGATCATTTCTCTAAAGACTAGTCAGCAGTCCCAAACTCCCCCCAAATCTCCTACTGACCGGTCTCGAACCGCTTCTCCT] [+] EMBL CD063803 [GGCAGCTGACTTCA TA CCGCAGCGCCTGCTCCTGATATGTCTCTCCGCTATTCGAACGATTCTAATTTTGTGTTCGATGATGCTTCATATAACGATCTGGAACTAGTTCACTTTCGTCTTACTGATTCTGCCCTGAAAGATATTGAGCAACTCGCTAGCACTCTAGGAAACCACAGCTTTAGCATTACGTTCAGTGGGTCCGAAGGAGTAATGTTCTATTATATAATTATTTCACTTCCGTAGTCTTTTATTGTTCCTATCGGGAAAAACAGCAGCAAATTTACATTCAGTACCTCAAGCTTAACAAGTACTCACGATGAATCTTTTAATTGCTTGCGCACCAAAGGAGTTTCAACTAATTGTCTGGGAAAGATGGTC ] [-] EMBL CD201004 [ TCATTATCCGCAGCGCCTGCTCCTGATATGTCTCTCCGCTATTCGAACGATTCTAATTTTGTGTTCGATGATGCTTCATATAACGATCTGGAACTAGTTCACTTTCGTCTTACTGATTCTGCCCTGGAAGATATTGAGCAACTCGCTAGCACTCTAGGAAACCACAGCTTTAGCATTACGTTCAGTGGGTCCGAAGGAGTAATGTTCTATTATATAATTATTTCACTTCCGTAGTCTTTTATTGTTCCTATCGGGATAAACAGCAGCAAATTTACATTCAGTACCTCAAGCTTAACAAGTACTCACGATGAATCTTTTAATTGCTTGCGCACCAAAGGAGTTTCAACTAATTGTCTGGGAAAGATGGTCTCCAGAATCACTGTCTACGCTAAGGAGGATAGCTTCTCAGCGGCTAAGGAGCGAATGACACAATTAGAAGACGAAAATAAAAAGTCTCAAACAAAAGAAATCAAATCTGCCAAATCCATGGCTTCAAGAACAGCAGTACCTTAATCCGCTCACAAACAAGGCAGTCATGGTGTAAATTTAAAGGGAAAGGGAAATGAAGTTTCACCTCAGAACATAGATTTCCCTAATGTAGCCAATCGAGTTCAGTCACAGAATCCTGTT ] [-] EMBL CD200997 [ AGTTCACTTTCGTCTTACTGATTCTGCCCTGAAAGATATTGAGCAACTCGCTAGCACTCTAGGAAACCACAGCTTTAGCATTACGTTCAGTGGGTCCGAAGGAGTAATGTTCTATTATATAATTATTTCACTTCCGTAGTCTTTTATTGTTCCTATCGGGAAAAACAGCAGCAAATTTACATTCAGTACCTCAAGCTTAACAAGTACTCACGATGAATCCTTTAATTGCTTGCGCACCAAAGGAGTTTCAACTAATTGTCTGGGAAAGATGGTCTCCGGAATCACTGTCAACGCTAAGGAGGATAGCTTCTCAGCGGCTAAGGAGCGAATGACACAATTAGAAGACGAAAATAAAAAGTCTCAAACAAAAGAAATCAAATCTGCCAAATCCATGGCTTCAAGAACAGCAGTACCTCAATCCGCTCACAAACAAGGCAGTCATGGTGTAAATTTAAAGGGAAAGGGAAATGAAGTTTCACCTCAGAACATAGATTTCCCTAATGTAGCCAATCGAGTTCAGTCACAGGATCCTGTT ] [+] EMBL CD118286 [ TATTGAGCAACTCGCTAGCACTCTAGGAAACCACAGCTTTAGCATTACGTTCAGTGGGTCCGAAGGAGTAATGTTCTATTATATAATTATTTCACTTCCGTAGTCTTTTATTGTTCCTATCGGGAAAAACAGCAGCAAATTTACATTCAGTACCTCAAGCTTAACAAGTACTCACGATGAATCTTTTAATTGCTTGCGCACCAAAGGAGTTTCAACTAATTGTCTGGGAAAGATGGTCTCCAGAATCACTGTCAACGCTAAAGAGGATAGCTT ] [+] EMBL CD089863 [ TCAGCGGCTAAGGAGCGAATGACACAATTAGAAGACGAAAATAAAAAGTCTCAAACAAAAGAAATCAAATCTGCCAAATCCATGGCTTCAAGAACAGCAGTACCTCAATCCGCTCACAAACAAGGCAGTCATGGTGTAAATTTAAAGGGAAAGGGAAATGAAGTTTCACCTCAGAACATAGATTTCCCTAATGTAGCCAATCGAGTTCAGTCACAGAATCCTGTTGGTTGTGGTCCCAGTCCTCCATTACCTAACCCAGATGTTTTGGCACGCTCACTGAGAGAACGCATTATTCACATACTGGCATTACGGC C TTATCAGCGCCCCGAATTATTATTACGGTTGTCCCGTGATGGCTTGTCGCATACCCAGAAAGAGCAAATATCCGACATCTTGTCGTCAGTCGGTCGTGTTGGAAGGCAATCGGCATACTACCTTATACCGT ] [+] EMBL CD089690 [ TCAGCGGCTAAGGAGCGAATGACACAATTAGAAGACGAAAATAAAAAGTCTCAAACAAAAGAAATCAAATCTGCCAAATCCATGGCTTCAAGAACAGCAGTACCTCAATCCGCCCACAAACAAGGCAGTCATGGTGTAAATTTAAAGGGAAAGGGAAATGGAGTTTCACCTCAGAACATAGATTTCCCTAATGTAGCCAATCGAGTTCAGTCACAGAATCCTGTTGGTTGTGGTCCCAGTCCTCCATTACCTAACCCAGATGTTTTGGCACGCTCACTGAGAGAACGCATTATTCACATACTGGCATTACGGC C TTATCAGCGCCCCGAATTATTATTACGGTTGTCCCGTGATGGCTTGTCGCATACCCAGAAAGAGCAAATATCCGACATCTTGTCGTCAGTCGGTCGTGTTGGAAGGCAATCGGCATACTAACTTATACCGTCTGTGGTGTCAGAATTAGACGCCA ] [-] EMBL CD095884 [ CAGCGGCTAGGGAGCGAATGGCAC ATTAAGAGACGAAGATAGAAAGTCTCAACGAAAAGAAATCAAATCTGCCAAAAGCATGGCATCAAGAACAGCAGTACCTCAATCCGCTCACAAACAAGGCAGTCATGGTGTAAATNTAAAGGGAAAGGGAAATGAAGTTTCACCTCAGAACATAGATTTCCCTAATGTAGCCAATCGAGTTCAGTCACAGAATCCTGTTGGTTGTGGTCCCAGTCCTCCATTACCTAACCCAGATGTTTTGGCACGCTCACTGAGAGAACGCATTATTCACATACTGGCATTACGGC C TTATCAGCGCCCCGAATTATTATTACGGTTGTCCCGTGATGGCTTGTCGCATACCCAGAAAGAGCAAATATCCGACATCTTGTCGTCAGTCGGTCGTGTTGGAAGGCAATCGGCATACTACCTTATACCGTCTGTGGTGTCAGAATTAGATGCCAACTGGCCAGGTTATAC T GGTGCTGAGAGAAGACGGATCATTTCTCTAAAGACTAGTCAGCAGTCCCAAACTCCCCCCAAATCTCCTACTGACCGGTCTCGAACCGCTTCTCCT] [+] EMBL CD096099 [ AGCGGCTAAGGAGCGAATGACACAATTAGAAGACGAAAATAAAAAGTCTCAAACAAAAGAAATCAAATCTGCCAAATCCATGGCTTCAAGAACAGCAGTACCTCAATCCGCTCACAAACAAGGCAGTCATGGTGTAAATTTAAAGGGAAAGGGAAATGAAGTTTCACCTCAGAACATAGATTTCCCTAATGTAGCCAATCGAGTTCAGTCACAGAATCCTGTTGGTTGTGGTCCCAGTCCTCCATTACCTAACCCAGATGTTTTGGCACGCTCACTGAGAGAACGCATTATTCACATACTGGCATTACGGC C TTATCAGCGCCCCGAATTATTATTACGGTTGTCCCGTGATGGCTTGTCGCATACCCAGAAAGAGCAAATATCCGACATCTTGTCGTCAGTCGGTCGTGTTGGAAGGCAATCGGCATACTACCTTATACCGTCTGTGGTGTCAGAATTAGATGCCAACTGGCCAGGTTATAC T GGTGCTGAGAGAAGACGGATCATTTCTCTAAAGACTAGTCAGCAGTCCCAAACTCCCCCCAAATCTCCTACTGACCGGT ] [+] EMBL CD096043 [ AGCGGCTAAGGAGCGAATGACACAATTAGAAGACGAAAATAAAAAGTCTCAAACAAAAGAAATCAAATCTGCCAAATCCATGGCTTCAAGAACAGCAGTACCTCAATCCGCTCGCAAACAAGGCAGTCATGGTGTAAATTTAAAGGGAAAGGGAAATGAAGTTTCACCTCAGAACATAGATTTCCCTAATGTAGCCAATCGAGTTCAGTCACAGAATCCTGTTGGTTGTGGTCCCAGTCCTCCATTACCTAACCCAGATGTTTTGGCACGCTCACTGAGAGAACGCATTATTCACATACTGGCATTACGGC C TTATCAGCGCCCCGAATTATTATTACGGTTGTCCCGTGATGGCTTGTCGCATACCCAGAAAGAGCAAATATCCGACATCTTGTCGTCAGTCGGTCGTGTTGGAAGGCAATCGGCATACTACCTTATACCGTCTGTGGTGTCAGAATTAGATGCCAACTGGCCAGGNTATAC T GGTGCTGAGAGAAGACGGATCATTTCTCTAAAGACTAGTCAGCAGTCCCAAACTCCCCCCAAATCTCCTACTGACCGnt ] [+] EMBL CD086252 [ AGCGGCTAAGGAGCGAATGACACAATTAGAAGACGAAAATAAAAAGTCTCAAACAAAAGAAATCAAATCTGCCAAATCCATGGCTTCAAGAACAGCAGTACCTCAATCCGCTCACAAACAAGGCAGTCATGGTGTAAATTTAAAGGGAAAGGGAAATGAAGTTTCACCTCAGAACATAGATTTCCCTAATGTAGCCAATCGAGTTCAGTCACAGAATCCTGTTGGTTGTGGTCCCAGTCCTCCATTACCTAACCCAGATGTTTTGGCACGCTCACTGAGAGAACGCATTATTCACATACTGGCATTACGGC C TTATCAGCGCCCCGAATTATTATTACGGTTGTCCCGTGATGGCTTGTCGCATACCCAGAAAGAGCAAATATCCGACATCTTGTCGTCAGTCGGTCGTGTTGGAAGGCAATCGGCATACTACCTTATACCGTCTGTGGTGTCAGAATTAGATGCCAACTGGCCAGGTTATAC T GGTGCTGAGAGAAGACGGATCATTTCTCTAAAGACTAGTCAGCAGTCCCAAACTCCCCCCAAATCTCCTACTGTCC ] [+] EMBL CD095990 [ AGCGGCTAAGGAGCGAATGACACAATTAGAAGACGAAAATAAAAAGTCTCAAACAAAAGAAATCAAATCTGCCAAATCCATGGCTTCAAGAACAGCAGTACCTCAATCCGCTCACAAACAAGGCAGTCATGGTGTAAATTTAAAGGGAAAGGGAAATGAAGTTTCACCTCAGAACATAGATTTCCCTAATGTAGCCAATCGAGTTCAGTCACAGAATCCTGTTGGTTGTGGTCCCAGTCCTCCATTACCTAACCCAGATGTTTTGGCACGCTCACTGAGAGAACGCATTATTCACATACTGGCATTACGGC C TTATCAGCGCCCCGAATTATTATTACGGTTGTCCCGTGATGGCTTGTCGCATACCCAGAAAGAGCAAATATCCGACATCTTGTCGTCAGTCGGTCGTGTTGGAAGGCAATCGGCATACTACCTTATACCGTCTGTGGTGTCAGAATTAGATGCCAACTGGCCAGGTTATAC T GGTGCTGAGAGAAGACGGATCATTTCTCTAAAGACTAGTCAGCAGTCCCAAACTCCNCCCAAATCTCCTACTGACC ] [+] EMBL CD086182 [ AGCGGCTAAGGAGCGAATGACACAATTAGAAGACGAAAATAAAAAGTCTCAAACAAAAGAAATCAAATCTGCCAAATCCATGGCTTCAAGAACAGCAGTACCTCAATCCGCTCACAAACAAGGCAGTCATGGTGTAAATTTAAAGGGAAAGGGAAATGAAGTTTCACCTCAGAACATAGATTTCCCTAATGTAGCCAATCGAGTTCAGTCACAGAATCCTGTTGGTTGTGGTCCCAGTCCTCCATTACCTAACCCAGATGTTTTGGCACGCTCACTGAGAGAACGCATTATTCACATACTGGCATTACGGC C TTATCAGCGCCCCGAATTATTATTACGGTTGTCCCGTGATGGCTTGTCGCATACCCAGAAAGAGCAAATATCCGACATCTTGTCGTCAGTCGGTCGTGTTGGAAGGCAATCGGCATACTACCTTATACCGTCTGTGGTGTCAGAATTAGATGCCAACTGGCCAGGTTATAC T GGTGCTGAGAGAAGACGGATCATTTCTCTAAAGACTAGTCAGC ] [+] EMBL CD095861 [ AGCGGCTAAGGAGCGAATGACACAATTAGAAGACGAAAATAAAAAGTCTCAAACAAAAGAAATCAAATCTGCCAAATCCATGGCTTCAAGAACAGCAGTACCTCAATCCGCTCACAAACAAGGCAGTCATGGTGTAAATTTAAAGGGAAAGGGAAATGAAGTTTCACCTCAGAATATAGATTTCCCTAATGTAGCCAATCGAGTTCAGTCACAGAATCCTGTTGGTTGTGGTCCCAGTCCTCCATTACCTAACCCAGATGTTTTGGCACGCTCACTGAGAGAACGCATTATTCACATACTGGCATTACGGC C TTATCAGCGCCCCGAATTATTATTACGGTTGTCCCGTGATGGCTTGTCGCATACCCAGAAAGAGCAAATATCCGACATCTTGTCGTCAGTCGGTCGTGTTGGAAGGCAATCGGCATACTACCTTATACCGTCTGTGGTGTCAGAATTAGATGCCAACTGGCCAGGTTATAC T GGTGCTGAGAGAAGACGGATCATTTCTCTAAAGACTAGTCAGC ] [+] EMBL CD095725 [ AGCGGCTAAGGAGCGAATGACACAATTAGAAGACGAAAATAAAAAGTCTCAAACAAAAGAAATCAAATCTGCCAAATCCATGGCTTCAAGAACAGCAGTACCTCAATCCGCTCACAAACAAGGCAGTCATGGTGTAAATTTAAAGGGAAAGGGAAATGAAGTTTCACCTCAGAACATAGATTTCCCTAATGTAGCCAATCGAGTTCAGTCACAGAATCCTGTTGGTTGTGGTCCCAGTCCTCCATTACCTAACCCAGATGTTTTGGCACGCTCACTGAGAGAACGCATTATTCACATACTGGCATTACGGC C TTATCAGCGCCCCGAATTATTATTACGGTTGTCCCGTGATGGCTTGTCGCATACCCAGAAAGAGCAAATATCCGACATCTTGTCGTCAGTCGGTCGTGTTGGAAGGCAATCGGCATACTACCTTATACCGTCTGTGGTGTCAGAATTAGATGCCAACGGGCCAGGTTATAC T GGTGCAGAGAGAAGACGGATCATTTCTCTAAAGACTAGTCAGC ] [+] EMBL CD096013 [ AGCGGCTAAGGAGCGAATGACACAATTAGAAGACGAAAATAAAAAGTCTCAAACAAAAGAAATCAAATCTGCCAAATCCATGGCTTCAAGAACAGCAGTACCTCAATCCGCTCACAAACAAGGCAGTCATGGTGTAAATTTAAAGGGAAAGGGAAATGAAGTTTCACCTCAGAACATAGATTTCCCTAATGTAGCCAATCGAGTTCAGTCACAGAATCCTGTTGGTTGTGGTCCCAGTCCTCCATTACCCAACCCAGATGTTTTGGCACGCTCACTGAGAGAACGCATTATTCACATACTGGCATTACGGC C TTATCAGCGCCCCGAATTATTATTACGGTTGTCCCGTGATGGCTTGTCGCATACCCAGAAAGAGCAAATATCCGACATCTTGTCGTCAGTCGGTCGTGTTGGAAGGCAATCGGCATACTACCTTATACCGTCTGTGGTGTCAGAATTAGATGCCAACCGGCCAGGTTATAC T GGTGCTGAGAGAAGACGGATCATTTCTCTAAAGACTAGTCAGC ] [+] EMBL CD086070 [ AGCGGCTAAGGAGCGAATGACACAATTAGAAGACGAAAATAAAAAGTCTCAAACAAAAGAAATCAAATCTGCCAAATCCATGGCTTCAAGAACAGCAGTACCTCAATCCGCTCACAAACAAGGCAGTCATGGTGTAAATTTAAAGGGAAAGGGAAATGAAGTTTCACCTCAGAACATAGATTTCCCTAATGTAGCCAATCGAGTTCAGTCACAGAATCCTGTTGGTTGTGGTCCCAGTCCTCCATTACCTAACCCAGATGTTTTGGCACGCTCACTGAGAGAACGCATTATTCACATACTGGCATTACGGC C TTATCAGCGCCCCGAATTATTATTACGGTTGTCCCGTGATGGCTTGTCGCATACCCAGAAAGAGCAAATATCCGACATCTTGTCGTCAGTCGGTCGTGTTGGAAGGCAATCGGCATACTACCTTATACCGTCTGTGGTGTCAGAATTAGATGCCAACTGGCCAGGTTATAC T GGTGCTGAGAGAAGACGGATCATTTCTCTAAAGACTAGTCAGCAGTCCCAAACTCCCCCCAAATCTCCTACTGACCGGTCTCGAACCGCTTCTCC ] [+] EMBL CD086119 [ AGCGGCTAAGGAGCGAATGACACAATTAGAAGACGAACATAAAAAGTCTCAAACCAAAGAAATCAAATCTGCCAAATCCATGGCTTCAAGAACAGCAGTACCTCAATCCGCTCACAAACAAGGCAGTCATGGTGTAAATTTAAAGGGAAAGGGAAGTGAAGTTTCACCTCAGAACATACATTTCCCTAATGTAGCCAATCGAGTTCAGTCACAGAATCCTGTTGGTTGTGGTCGCAGTCCTCCATTACCTAACCCAGATGTTTTGGCACGCTCACTGATAGAACGCATTATTCACATACTGGCATT CGGCGCTTTATCAGCGCCCCGAATTATTATTACGGTTGTCCCGTGATGGCTTGTCGCATACCCAGAAAGAGCAAATATCCGACATCTTGTCGTCAGTCGGTCGTGTTGGAAGGCAATCGGCATACTACCTTATACCGTCTGTGGTGTCAGAATTAGATGCCAACTGGCCAGG TATTCTT GTTGCTGAGAGAAGACGGATCATTTCTCTAAAGACTAGTCAGCAGTCCCAAACTCCCCCCAAATCTTCTACTGACCGGT ] [+] EMBL CD086226 [ AGCGGCTAAGGAGCGAATGACACAATTAGAAGACGAAAATAAAAAGTCTCAAACAAAAGAAATCAAATCTGCCAAATCCATGGCTTCAAGAACAGCAGTACCTCAATCCGCTCACAAACAAGGCAGTCATGGTGTAAATTTAAAGGGAAAGGGAAATGAAGTTTCACCTCAGAACATAGATTTCCCTAATGTAGCCAATCGAGTTCAGTCACAGAATCCTGTTGGTTGTGGTCCCAGTCCTCCATTACCTAACCCAGATGTTTTGGCACGCTCACTGAGAGAACGCATTATTCACATACTGGCATTACGGC C TTATCAGCGCCCCGAATTATTATTACGGTTGTCCCGTGATGGCTTGTCGCATACCCAGAAAGAGCAAATATCCGACATCTTGTCGTCAGTCGGTCGTGTTGGAAGGCAATCGGCATACTACCTTATACCGTCTGTGGTGTCAGAATTAGATGCCAACTGGCCAGGTTATAC T GGTGCTGAGAGAAGACGGATCATTTCTCTAAAGACTAGTCAGCAGTCCCAAACTCCCCCCAAATCTCCTACTGACCGGT ] [-] EMBL CD086273 [ GCGGCTAAGGAGCGAATGACACAATTAGAAGACGAAAATAAAAAGTCTCAAACAAAAGAAATCAAATCTGCCAAATCCATGGCTTCAAGAACAGCAGTACCTCAATCCGCTCACAAACAAGGCAGTCATGGTGTAAATTTAAAGGGAAAGGGAAATGAAGTTTCACCTCAGAACATAGATTTCCCTAATGTAGCCAATCGAGTTCAGTCACAGAATCCTGTTGGTTGTGTTCCCAGTCCTCCATTACCTAACCCAGATGTTTTGGCACGCTCACTGAGAGAACGCATTATTCACATACTGGCATTACGGC C TTATCAGCGCCCCGAATTATTATTACGGTTGTCCCGTGATGGCTTGTCGCATACCCAGAAAGAGCAAATATCCGACATCTTGTCGTCAGTCGGTCGTGTTGGAAGGCAATCGGCATACTACCTTATACCGTCTGTGGTGTCAGAATTAGATGCCAACTGGCCAGGTTATAC T GGTGCTGAGAGAAGACGGATCATTTCTCTAAAGACTAGTCAGCAGTCCCAAACTCCCTCCAAATCTCCTACTGACCGGTC ] [+] EMBL CD086125 [ GAAAGGGAAATGAAGTTTCGCCTCAGAACATAGATTTCCCTAATGTAGCCAATCGAGTTCAGTCACAGAATCCTGTTGGTTGTGGTCCCGGTCTTCCATTACCTAACCCAGATGTTTTGGCACGCTCACTGAGAGAACGCATTATTCACATACTGGCATTACGGC C TTATCAGCGCCCCGAATTATTATTACGGTTGTCCCGTGATGGCTTGTCGCATACCCAGAAAGAGCAAATATCCGACATCTTGTCGTCAGTCGGTCGTGTTGGAAGGCAATCGGCATACTACCTTATACCGTCTGTGGTGTCAGAATTAGATGCCAACTGGCCAGGTTATAC TAGGTGCTGAGAGAAGACGGATCATTTCTCTAAAGACTAGTCAGCAGTCCCAAACTCCCCCCAAATCTCCTACTGACCGGTCTCGAACCGCTTCTCC ] [+] EMBL CD150728 [ TATTCACATACTGCTATTACGGC C TTATCAGCGCCCCGAATTATTATTACGGTTGTCCCGTGATGGCTTGTCGCATACCCAGAAAGAGCAAATATCCGACATCTTGTCGTCAGTCGGTCGTGTTGGAAGGCAATCGGCATACTACCTTATACTGTCTGTGGTGTCAGAATTAGATGCCAACTGGCCAGGTTATAC T GGTGCTGAGAGAAGACGGATCATTTCTCTAAAGACTAGTCAGCAGTCCCAAACT ] [+] EMBL CD150724 [ TATTCACATACTGGCATTACGGC C TTATCAGCGCCCCGAATTATTATTACGGTTGTCCCGTGATGGCTTGTCGCATACCCAGAAAGAGCAAATATCCGACATCTTGTCGTCAGTCGGTCGTGTTGGAAGGCAATCGGCATACTACCTTATACTGTCTGTGGTGTCAGAATTAGATGCCAACTGGCCCGGTTATAC T GGTGCTGAGAGAAGACGGATCATTTCTCTAAAGACTAGTCAGCAGTCCCAAACT ] consensusID : consensus_10974#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 654 fasta sequence [AGAGTCACTGGCCGACTTTTAACATTAGAAGACGAAAATAAAAAGTCTCAAACAAAAGAAATCAAATCTGCCAAATCCATGGCTTCAAGAACAGCAGTACCTCAATCCGCTCACAAACAAGGCAGTCATGGTGTAAATTTAAAGGGAAAGGGAAATGAAGTTTCACCTCAGAACATAGATTTCCCTAATGTAGCCAATCGAGTTCAGTCACAGAATCCTGTTGGTTGTGGTCCCAGTCCTCCATTACCTAACCCAGATGTTTTGGCACGCTCACTGAGAGAACGCATTATTCACATACTGGCATTACGGCCTTATCAGCGCCCCGAATTATTATTACGGTTGTCCCGTGATGGCTTGTCGCATACCCAGAAAGAGCAAATATCCGACATCTTGTCGTCAGTCGGTCGTGTTGGAAGGCAATCGGCATACTACCTTATACCGTCTGTGGTGTCAGAATTAGATGCCAACTGGCCAGGTTATACTGGTGCTGAGAGAAGACGGATCATTTCTCTAAAGACTAGTCAGCAGTCCCAAACTCCCCCCAAATCTCCTACTGACCGGTCTCGAACCGCTTCTCCTGACAATCTGCACATCCCCTCTGATGACCAGTTTACTCGACGTCCAACAAGAGCAAATGCTGCGTCGGCACCTCAT] [+] EMBL CD086100 [AGAGTCACTGGCCGACTTTTAACATTAGAAGACGAAAATAAAAAGTCTCAAACAAAAGAAATCAAATCTGCCAAATCCATGGCTTCAAGAACAGCAGTACCTCAATCCGCTCACAAACAAGGCAGTCATGGTGTAAATTTAAAGGGAAAGGGAAATGAAGTTTCACCTCAGAACATAGATTTCCCTAATGTAGCCAATCGAGTTCAGTCACAGAATCCTGTTGGTTGTGGTCCCAGTCCTCCATTACCTAACCCAGATGTTTTGGCACGCTCACTGAGAGAACGCATTATTCACATACTGGCATTACGGCCTTATCAGCGCCCCGAATTATTATTACGGTTGTCCCGTGATGGCTTGTCGCATACCCAGAAAGAGCAAATATCCGACATCTTGTCGTCAGTCGGTCGTGTTGGAAGGCAATCGGCATACTACCTTATACCGTCTGTGGTGTCAGAATTAGATGCCAACTGGCCAGGTTATACTGGTGCTGAGAGAAGACGGATCATTTCTCTAAAGACTAGTCAGCAGTCCCAAACTCCCCCCAAATCTCCTACTGACCGGTCTCGAACCGCTTCTCCTGACAATCTGCACAT ] [+] EMBL CD113986 [ AGTCCAGTCACAGAATCCTGTTGGTTGAGGTCCCAGTCCTCCATTACCTAACCCACATGTTTTGGCACGCTCACTGATAGAACGCATTATTCACATACTGGCATTACGGCCTTATCAGCGCCCCGAATTATTATTACGGTTGTCCCGTGATGGCTTGTCGCATACCCATAAAGAGCAAATATCCGACATCTTGTCGTCAGTCGGTCGTGTTGGAAGGCAATCGGCATACTACCTTATACCGTCTGTGGTGTCAGAATTAGATGCCAACTGGCCAGGTTATACTGGTGCTGAGAGAAGACGGATCATTTCTCTAAAGACTANTCATCAGCCCCAAACTCCCCCCAAATCTCCTACTGACCGGTCTCGAACCGCTTCTCCTGACTATTCGTCCACCCCCTCTGATGACCAGTTTACTCGACGTCCAACAAGAGCAAATGCTGCGTCGGCACCTCAT] consensusID : consensus_10974#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 464 fasta sequence [GGAGTTTGGGACTGCTGACTAGTCTTTAGAGAAATGATCCGTCTTCTCTCAGCACCAGTATAACCTGGCCAGTTGGCATCTAATTCTGACACCTCAGAACATAGATTTCCCTAATGTAGCCAATCGAGTTCAGTCACAGAATCCTGTTGGTTGTGGTCCCAGTCCTCCATTACCTAACCCAGATGTTTTGGCACGCTCACTGAGAGAACGCATTATTCACATACTGGCATTACGGCCTTATCAGCGCCCCGAATTATTATTACGGTTGTCCCGTGATGGCTTGTCGCATACCCAGAAAGAGCAAATATCCGACATCTTGTCGTCAGTCGGTCGTGTTGGAAGGCAATCGGCATACTACCTTATACCGTCTGTGGTGCCAGAATTAGATGCCAACTGGCCAGGTTATACTGGTGCTGAGAGAAGACGGATCATTTCTCTAAAGACTACCCAGCAGTCCCAACCTC] [+] EMBL CD095970 [GGAGTTTGGGACTGCTGACTAGTCTTTAGAGAAATGATCCGTCTTCTCTCAGCACCAGTATAACCTGGCCAGTTGGCATCTAATTCTGACACCTCAGAACATAGATTTCCCTAATGTAGCCAATCGAGTTCAGTCACAGAATCCTGTTGGTTGTGGTCCCAGTCCTCCATTACCTAACCCAGATGTTTTGGCACGCTCACTGAGAGAACGCATTATTCACATACTGGCATTACGGCCTTATCAGCGCCCCGAATTATTATTACGGTTGTCCCGTGATGGCTTGTCGCATACCCAGAAAGAGCAAATATCCGACATCTTGTCGTCAGTCGGTCGTGTTGGAAGGCAATCGGCATACTACCTTATACCGTCTGTGGTGCCAGAATTAGATGCCAACTGGCCAGGTTATACTGGTGCTGAGAGAAGACGGATCATTTCTCTAAAGACTACCCAGCAGTCCCAACCTC] consensusID : consensus_10974#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 401 fasta sequence [GCGGCTAAGGAGCGAATGACACAATTAGAAGACGAAAATAAAAAGTCTCAAACAAAAGAAATCAAATCTGCCAAATCCATGGCTTCAAGAACAGCAGTACCTCAATCCGCTCACAAACAAGGCAGTCATGGTGTAAATTTAAAGGGAAAGGGAAATGAAGTTTCACCTCAGAACATAGATTTCCCTAATGTAGCCAATCGAGTTCAGTCACAGAATCCTGTTGGTTGTGGTCCCAGTCCTCCATTACCTAACCCAGATGTTTTGGCACGCTCACTGAGAGAACGCATTATTCACATACTGGCATTACGGCCTTATCAGCGCCCCGAATTATTATTACGGTTGTCCCGTGATGGCTTGTCGCATACCCAGAAAGAGCAAATATCCGACATTAAATAACAATG] [-] EMBL CD095770 [GCGGCTAAGGAGCGAATGACACAATTAGAAGACGAAAATAAAAAGTCTCAAACAAAAGAAATCAAATCTGCCAAATCCATGGCTTCAAGAACAGCAGTACCTCAATCCGCTCACAAACAAGGCAGTCATGGTGTAAATTTAAAGGGAAAGGGAAATGAAGTTTCACCTCAGAACATAGATTTCCCTAATGTAGCCAATCGAGTTCAGTCACAGAATCCTGTTGGTTGTGGTCCCAGTCCTCCATTACCTAACCCAGATGTTTTGGCACGCTCACTGAGAGAACGCATTATTCACATACTGGCATTACGGCCTTATCAGCGCCCCGAATTATTATTACGGTTGTCCCGTGATGGCTTGTCGCATACCCAGAAAGAGCAAATATCCGACATTAAATAACAATG] consensusID : consensus_10974#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 238 fasta sequence [TGACTTCATTATCCGCAGCGCCTGCTCCTGATATGTCTCTCCGCTATTCGAACGATTCTAATTTTGTGTTCGATGATGCTTCATATAACGATCTGGAACTAGTTCACTTTCGTCTTACTGATTCTGCCCTGAAAGATATTGAGCAACTCGCTAGCACTCTAGGAAACCACAGCTTTAGCATTACGTTCAGTGGGTCCGAAGGATCTTTTATTGTTCCTATCGGGAAAAACAGCAGCAA] [-] EMBL CD194713 [TGACTTCATTATCCGCAGCGCCTGCTCCTGATATGTCTCTCCGCTATTCGAACGATTCTAATTTTGTGTTCGATGATGCTTCATATAACGATCTGGAACTAGTTCACTTTCGTCTTACTGATTCTGCCCTGAAAGATATTGAGCAACTCGCTAGCACTCTAGGAAACCACAGCTTTAGCATTACGTTCAGTGGGTCCGAAGGATCTTTTATTGTTCCTATCGGGAAAAACAGCAGCAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_10974#1 ------------------------------------------------------------ consensus_10974#3 ------------------------------------------------------------ consensus_10974#2 ------------------------------------------------------------ consensus_10974#0 GGCAGCTGACTTCATACCGCAGCGCCTGCTCCTGATATGTCTCTCCGCTATTCGAACGAT 60 consensus_10974#4 ------------------------------------------------------------ consensus_10974#1 ------------------------------------------------------------ consensus_10974#3 ------------------------------------------------------------ consensus_10974#2 ------------------------------------------------------------ consensus_10974#0 TCTAATTTTGTGTTCGATGATGCTTCATATAACGATCTGGAACTAGTTCACTTTCGTCTT 120 consensus_10974#4 ------------------------------------------------------------ consensus_10974#1 ------------------------------------------------------------ consensus_10974#3 ------------------------------------------------------------ consensus_10974#2 ------------------------------------------------------------ consensus_10974#0 ACTGATTCTGCCCTGAAAGATATTGAGCAACTCGCTAGCACTCTAGGAAACCACAGCTTT 180 consensus_10974#4 ------------------------------------------------------------ consensus_10974#1 ------------------------------------------------------------ consensus_10974#3 ------------------------------------------------------------ consensus_10974#2 ------------------------------------------------------------ consensus_10974#0 AGCATTACGTTCAGTGGGTCCGAAGGAGTAATGTTCTATTATATAATTATTTCACTTCCG 240 consensus_10974#4 ------------------------------------------------------------ consensus_10974#1 ------------------------------------------------------------ consensus_10974#3 ------------------------------------------------------------ consensus_10974#2 ------------------------------------------------------------ consensus_10974#0 TAGTCTTTTATTGTTCCTATCGGGAAAAACAGCAGCAAATTTACATTCAGTACCTCAAGC 300 consensus_10974#4 ------------------------------------------------------------ consensus_10974#1 ------------------------------------------------------------ consensus_10974#3 ------------------------------------------------------------ consensus_10974#2 ------------------------------------------------------------ consensus_10974#0 TTAACAAGTACTCACGATGAATCTTTTAATTGCTTGCGCACCAAAGGAGTTTCAACTAAT 360 consensus_10974#4 ------------------------------------------------------------ consensus_10974#1 ---------------------------------------------------------AGA 3 consensus_10974#3 ---------------------------------------------------------GCG 3 consensus_10974#2 ------------------------------------------------------------ consensus_10974#0 TGTCTGGGAAAGATGGTCTCCAGAATCACTGTCAACGCTAAGGAGGATAGCTTCTCAGCG 420 consensus_10974#4 ------------------------------------------------------------ consensus_10974#1 GTCACTGGCCGACTTTTAACATTAGAAGACGAAAATAAAAAGTCTCAAACAAAAGAAATC 63 consensus_10974#3 GCTAAGGAGCGAATGACACAATTAGAAGACGAAAATAAAAAGTCTCAAACAAAAGAAATC 63 consensus_10974#2 -----------------------------------------------------GGAGTTT 7 consensus_10974#0 GCTAAGGAGCGAATGACACAATTAGAAGACGAAAATAAAAAGTCTCAAACAAAAGAAATC 480 consensus_10974#4 ------------------------------------------------------------ consensus_10974#1 AAATCTGCCAAATCCATGGCTTCAAGAACAGCAGTACCTCAATCCGCTCACAAACAAGGC 123 consensus_10974#3 AAATCTGCCAAATCCATGGCTTCAAGAACAGCAGTACCTCAATCCGCTCACAAACAAGGC 123 consensus_10974#2 GGGACTGCTGACT----AGTCTTTAGAGAAATGATCCGTC--TTCTCTCAGCACCAGTAT 61 consensus_10974#0 AAATCTGCCAAATCCATGGCTTCAAGAACAGCAGTACCTCAATCCGCTCACAAACAAGGC 540 consensus_10974#4 ------------------------------------------------------------ consensus_10974#1 AGTCATGGTGTAAAT-TTAAAGGGAAAGGGAAATGAAGTTTCACCTCAGAACATAGATTT 182 consensus_10974#3 AGTCATGGTGTAAAT-TTAAAGGGAAAGGGAAATGAAGTTTCACCTCAGAACATAGATTT 182 consensus_10974#2 AACC-TGGCC--AGT-T----GGCATCTAATTCTGA-----CACCTCAGAACATAGATTT 108 consensus_10974#0 AGTCATGGTGTAAAT-TTAAAGGGAAAGGGAAATGAAGTTTCACCTCAGAACATAGATTT 599 consensus_10974#4 -----TGACTTCATTATCCGCAGCGCCTGCTCCTGATATGTCTCTCCGCTATTCGAACGA 55 ** * * * * *** * * * * * consensus_10974#1 CCCTAATGTAGCCAATCGAGTTCAGTCACAGAATCCTGTTGGTTGTGGTCCCAGTCCTCC 242 consensus_10974#3 CCCTAATGTAGCCAATCGAGTTCAGTCACAGAATCCTGTTGGTTGTGGTCCCAGTCCTCC 242 consensus_10974#2 CCCTAATGTAGCCAATCGAGTTCAGTCACAGAATCCTGTTGGTTGTGGTCCCAGTCCTCC 168 consensus_10974#0 CCCTAATGTAGCCAATCGAGTTCAGTCACAGAATCCTGTTGGTTGTGGTCCCAGTCCTCC 659 consensus_10974#4 TTCTAATTTTGTGTTCGATGATGCTTCATATAAC-------GATCTGGAACTAGTTCACT 108 ***** * * * * *** * ** * * *** * *** * * consensus_10974#1 ATTACCTAACCCAGATGTTTTGGCACGCTCACTGAGAGAACGCATTATTCACATACTGGC 302 consensus_10974#3 ATTACCTAACCCAGATGTTTTGGCACGCTCACTGAGAGAACGCATTATTCACATACTGGC 302 consensus_10974#2 ATTACCTAACCCAGATGTTTTGGCACGCTCACTGAGAGAACGCATTATTCACATACTGGC 228 consensus_10974#0 ATTACCTAACCCAGATGTTTTGGCACGCTCACTGAGAGAACGCATTATTCACATACTGGC 719 consensus_10974#4 TTCGTCTTACTGATTCTGCCCTGAAAGAT-ATTGAGC-AACTCGCTAG-CACTCTAGGAA 165 * ** ** * * * * * * **** *** * ** *** * consensus_10974#1 ATTACGGCCTTATCAGCGCCCCGAATTATTATTACGGTTGTCCCGTGATGGCTTGTCGCA 362 consensus_10974#3 ATTACGGCCTTATCAGCGCCCCGAATTATTATTACGGTTGTCCCGTGATGGCTTGTCGCA 362 consensus_10974#2 ATTACGGCCTTATCAGCGCCCCGAATTATTATTACGGTTGTCCCGTGATGGCTTGTCGCA 288 consensus_10974#0 ATTACGGCCTTATCAGCGCCCCGAATTATTATTACGGTTGTCCCGTGATGGCTTGTCGCA 779 consensus_10974#4 ACCACAGCTTTAGCATTACGTTCAGTGGGTCCGAAGGATCTTTTATTGTTCCTATCGGGA 225 * ** ** *** ** * * * * * ** * * * * ** * * consensus_10974#1 TACCCAGAAAGAGCAAATATCCGACATCTTGTCGTCAGTCGGTCGTGTTGGAAGGCAATC 422 consensus_10974#3 TACCCAGAAAGAGCAAATATCCGACATTAAATAA-CAATG-------------------- 401 consensus_10974#2 TACCCAGAAAGAGCAAATATCCGACATCTTGTCGTCAGTCGGTCGTGTTGGAAGGCAATC 348 consensus_10974#0 TACCCAGAAAGAGCAAATATCCGACATCTTGTCGTCAGTCGGTCGTGTTGGAAGGCAATC 839 consensus_10974#4 AAAACAGCAGCAA----------------------------------------------- 238 * *** * * consensus_10974#1 GGCATACTACCTTATACCGTCTGTGGTGTCAGAATTAGATGCCAACTGGCCAGGTTATAC 482 consensus_10974#3 ------------------------------------------------------------ consensus_10974#2 GGCATACTACCTTATACCGTCTGTGGTGCCAGAATTAGATGCCAACTGGCCAGGTTATAC 408 consensus_10974#0 GGCATACTACCTTATACCGTCTGTGGTGTCAGAATTAGATGCCAACTGGCCAGGTTATAC 899 consensus_10974#4 ------------------------------------------------------------ consensus_10974#1 TGGTGCTGAGAGAAGACGGATCATTTCTCTAAAGACTAGTCAGCAGTCCCAAACTCCCCC 542 consensus_10974#3 ------------------------------------------------------------ consensus_10974#2 TGGTGCTGAGAGAAGACGGATCATTTCTCTAAAGACTACCCAGCAGTCCCAACCTC---- 464 consensus_10974#0 TGGTGCTGAGAGAAGACGGATCATTTCTCTAAAGACTAGTCAGCAGTCCCAAACTCCCCC 959 consensus_10974#4 ------------------------------------------------------------ consensus_10974#1 CAAATCTCCTACTGACCGGTCTCGAACCGCTTCTCCTGACAATCTGCACATCCCCTCTGA 602 consensus_10974#3 ------------------------------------------------------------ consensus_10974#2 ------------------------------------------------------------ consensus_10974#0 CAAATCTCCTACTGACCGGTCTCGAACCGCTTCTCCT----------------------- 996 consensus_10974#4 ------------------------------------------------------------ consensus_10974#1 TGACCAGTTTACTCGACGTCCAACAAGAGCAAATGCTGCGTCGGCACCTCAT 654 consensus_10974#3 ---------------------------------------------------- consensus_10974#2 ---------------------------------------------------- consensus_10974#0 ---------------------------------------------------- consensus_10974#4 ---------------------------------------------------- |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||