These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10979#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 27 consensus length = 1004 fasta sequence [AAACAATATGTATAATTATTCGCATATTTTACAAAGGGTGCAGTTAGCGACTAAGCTATTTGAGCGTCTTTGACTTTGAGTGATTTAATCACAGCAAGAGAAGACCCTTTTAGTGTCCATGGAACATTTTTATACATAGCGATCCCGTTTTCGTTTACTCTAAGATCTGGCTTCACTTGTTCAAAAATTTTCTTTTTGGGATTAAGTTGGTCATCAGGATCGTGTCTAGTTCCAGGAACCACAACTGAATCACCTAACTGTATATCTGG-GCCCTCGACAATCAAAGGCTCTACTCCACATGTATCTGGAGAGCTTGCACACATCAACATTGCTTCTGATTCAACACCACGCATTTTTGCTGGCTTGAGGTTGCAGAGAAATATCCCGACTCGATTTTGTAGTGATTCGATAGGCAGATATTTCACCAGCCCGCTGACAACAGTGCGTATTTCACTT-CCACCCAAGTCAACTTTCTCTACATATAACGAGTCAGCATCAGGATGTCGATTTACATCTATAATTCGACCGACACGTAGATCCAGACGACCAATATCAACAGGCTTCTCAGCAGATTGTGGTTTTCCATCTGGTATTTTACGTTCGGTCTTCGGATTTTTAGTTTTCACTGAGTCTGTTTGTACCTCTGTCCTCTGTTCGGGTTGCTCTTCAGGCACTAG-TTTTTTTTCAGACAATGGTCCGATTTCCAGTGAATTTCCATTCAAATTAGAAACACTGGATACAGCCTTGACAGATGGTAAATGATATTGTTGGTTTAACCCAAGAAGTAGCTCCTGTTGAATAACTGATTCTTTTAACGATTTTATCCTGTGCAACAACTGTTGA-TTCTGTACTTTGAGGCATGCTTCAACATAGTTTACCGCATCTGGTGTCGCAATTGATTCCAAATGTTTTAACTTGTCAGAGATAGACTGCAATAGCTTATTCATCCTCGCAACCCGACAGTACCGAATAATTTTATACAGCGCGCCAAACGGTCCAAATGG] [+] EMBL CD074870 [AAACAATATGTATAATTATTCGCATATTTTACAAAGGGTGCAGTTAGCGACTAAGCTATTTGAGCGTCTTTGACTTTGAGTGATTTAATCACAGCAAGAGAAGACCCTTTTAGTGTCCATGGAACATTTTTATACATAGCGATCCCGTTTTCGTTTACTCTAAGATCTGGCTTCACTTGTTCAAAAATTTTCTTTTTGGGATTAAGTTGGTCATCAGGATCGTGTCTAGTTCCAGGAACCACAACTGAATCACCTAACTGTATATCTGG GCCCTCGACAATCAAAGGCTCTACTCCACATGTATCTGGAGAGCTTGCACACATCAACATTGCTTCTGATTCAACACCACGCATTTTTGCTGGCTTGAGGTTGCAGAGAAATATCCCGACTCGATTTTGTAGTGATTCGATAGGCAGATATTTCACCAGCCCGCTGACAACAGTGCGTATTTCACTT CCACCCAAGTCAACTTTCTCTACATATAACGAGTCAGCATCAGGATGTCGATTTACATCTATAATTCGACCGACACGTAGATCCAGACGACCAATATCAACAGGCTTCTCAGCAGATTGTGGTTTTCCATCTGGTATTTTACGTTCGGTCTTCGGATTTTTAGTTNTCACTGAGTCT ] [-] EMBL AI977628 [ ATCCCGTTTTCGTTTACTCTAAGATCTGGCTTCACTTGTTCAAAAATTTTCTTTTTGGGATTAAGTTGGTCATCAGGATCGTGTCTAGTTCCAGGAACCACAACTGAATCACCTAACTGTATATCTGG GCCCTCGACAATCAAAGGCTCTACTCCACATGTATCTGGAGAGCTTGCACACATCAACATTGCTTCTGATTCAACACCACGCATTTTTGCTGGCTTGAGGTTGCAGAGAAATATCCCGACTCGATTTTGTAGTGATTCGATAGGCAGATATTTCACCAGCCCGCTGACAACAGTGCGTATTTCACTT CCACCCAAGTCAACTTTCTCTACATATAACGAGTCAGCATCAGGATGTCGATTTACATCTATAATTCGACCGACACGTAGATCCAGACGACCAATATCAACAGGCTTCTCAGCAGATTGTGGTTTTCCATCTGGTATTTTACGTTCG ] [+] EMBL CD066235 [ ATCTGGNGCCCTCGACAATCAAAGGCTCTACTCCACATGTATCTGGAGAGCTTGCACACATCAACATTGCTTCTGATTCAACACCACGCATTTTTGCTGGCTTGAGGTTGCAGAGAAATATCCCGACTCGATTTTGTAGTGATTCGATAGGCAGATATTTCACCAGCCCGCTGACAACAGTGCGTATTTCACTT CCACCCAAGTCAACTTTCTCTACATATAACGAGTCAGCATCAGGATGTCGATTTACATCTATAATTCGACCGACACGTAGATCCAGACGACCAATATCAACAGGCTTCTCAGCAGATTGTGGTTTTCCATCTGGTATTTTATGTTCGGTCTTCGGATTTTTAGTTTTCACTGAGTCTGTTTGTACCTCTGTCCTCTGTTCGGGTTGCTCTTCAGGCACTAG TTTTTTTTCAGACAATGGTCCGATTTCCAGTGAATTTCCATTCAAATTAGAAACACTGGATACAGCCTTGACAGATGGTAAATGATATTGTTGGTTTAACCCAAGAAGTAGCTCCTGTTGAATAACTGATTCTCTTAACGA ] [-] EMBL CD110763 [ GG CCCCTCGACAATCAAAGGCTCTACTCCACATGTATCTGGAGAGCTTGCACACATCAACATTGCTTCTGATTCAACACCACGCATTTTTGCTGGCTTGAGGTTGCAGAGAAATATCCCGACTCGATTTTGTAGTGATTCGATAGGCAGATATTTCACCAGCCCGCTGACAACAGTGCGTATTTCACTT CCACCCAAGTCAACTTTCTCTACATATAACGAGTCAGCATCAGGATGTCGATTTACATCTATACTTCGACCGACACGTAGATCCAGACGACCAATAT ] [+] EMBL CD145016 [ CACATGTATCTGGAGAGCTTGCACACATCAACATTGCTTCTGATTCAACACCACGCATTTTTGCTGGCTTGAGGTTGCAGAGAAATATCCCGACTCGATTTTGTAGTGATTCGATAGGCAGATATTTCACCAGCCCGCTGACAACAGTGCGTATTTCACTT CCACCCAAGTCAACTTTCTCTACATATAACGAGTCAGCATCAGGATGTCGATTTACATCTATAATTCGACCGACATGTAGATCCAGACGACCAATATCAACAGGCTTCTCAGCAGATTGTGGTTTTCCATCTGGTATTTTACGTTCGGTCTTCGGATTTTTAGTTTTCACTGAGTCTGTTTG ] [+] EMBL CD145002 [ CACATGTATCTGGAGAGCTTGCACACATCAACATTGCTTCTGATTCAACACCACGCATTTTTGCTGGCTTGAGGTTGCAGAGAAATATCCCGACTCGATTTTGTAGTGATTCGATAGGC ] [+] EMBL CD145074 [ CACATGTATCTGGAGAGCTTGCACACATCAACATTGCTTCTGATTCAACACCACGCATTTTTGCTGGCTTGAGGTTGCAGAGAAATATCCCGACTCGATTTTGTAGTGATTCGATAGGCAGATATTTCACCAGCCCGCTGACAACAGTGCGTATTTCACTT CCACCCAAGTCAACTTTCTCTACATATAACGAGTCAGCATCAGGATGTCGATTTACATCTATAATTCGACCGACACGTAGATCCAGACGACCAATATCAACAGGCTTCTCAGCAGATTGTGGTTTTCCATCTGGTATTTTACGTTCGGTCTTCGGATTTTTAGTTTTCACTGAGTCTGTTTG ] [-] EMBL CD145068 [ ACATGTATCTGGAGAGCTTGCACACATCAACATTGCTTCTGATTCAACACCACGCATTTTTGCTGGCTTGAGGTTGCAGAGAAATATCCCGACTCGATTTTGTAGTGATTCGATAGGCA ] [-] EMBL CD152792 [ ACATGTATCTGGAGAGCTTGCACACATCAACATTGCTTCTGATTCAACACCACGCATTTTTGCTGGCTTGAGGTTGCAGAGAAATATCCCGACTCGATTTTGTAGTGATTCGATAGGCAGATATTTCCCCAAGCCGGTGGCCACAGGGGGGATTTTGGTTCCCCCCCAAGTCACTTTTCTTTACATATAACGAGTCAGCATCAGGATGTCGATTTACATCTATAATTCGACCGACACGTAGATCCAGACGACCAATA ] [-] EMBL CD145129 [ ACATGTATCTGGAGAGCTTGCACACATCAACATTGCTTCTGATTCAACACCACGCATTTTTGCTGGCTTGAGGTTGCAGAGAAATATCCCGACTCGATTTTGTAGTGATTCGATAGGCAGATATTTCACCAGCCCGCTGACAACAGTGCGTATTTCACTT CCACCCAAGTCAACTTTCTCTACATATAACGAGTCAGCATCAGGATGTCGATTTACATCTATAATTCGACCGACACGTAGATCCAGACGACCAATATCAACAGGCTTCTCAGCAGATTGTGGTTTTCCATCTGGTATTTTACGTTCGGTCTTCGGATTTTTAGTTTTCACTGAGTCTGTTTGT ] [-] EMBL CD144995 [ ACATGTATCTGGAGAGCTTGCACACATCAACATTGCTTCTGATTCAACACCACGCATTTTTGCTGGCTTGAGGTTGCAGAGAAATATCCCGACTCGATTTTGTAGTGATTCGATAGGCAGATATTTCACCAGCCCGCTGACAACAGTGCGTATTTCACTT CCACCCAAGTCAACTTTCTCTACATATAACGAGTCAGCATCAGGATGTCGATTTACATCTATAATTCGACCGACACGTAGATCCAGACGACCAATATCAACAGGCTTCTCAGCAGATTGTGGTTTTCCATCTGGTATTTTACGTTCGGTCTTCGGATTTTTAGTTTTCACTGAGTCTGTTTGT ] [-] EMBL CD145143 [ ACATGTATCTGGAGAGCTTGCACACATCAACATTGCTTCTGATTCAACACCACGCATTTTTGCTGGCTTGAGGTTGCAGAGAAATATCCCGACTCGATTTTGTAGTGATTCGATAGGCAGATATTTCACCAGCCCGCTGACAACAGTGCGTATTTCACTT CCACCCAAGTCAACTTTCTCTACATATAACGAGCCAGCATCAGGATGTCGATTTACATCTATAATTCGACCGACACGTAGATCCAGACGACCAATATCAACAGGCTTCTCAGCAGATTGTGGTTTTCCATCTGGTATTTTACGTTCGGTCTTCGGATTTTTAGTTTTCACTGAGTCTGTTTGT ] [-] EMBL CD145080 [ ACATGTATCTGGAGAGCTTGCACACATCAACATTGCTTCTGATTCAACACCACGCATTTTTGCTGGCTTGAGGTTGCAGAGAAATATCCCGACTCGATTTTGTAGTGATTCGATAGGCAGATATTTCACCAGCCCGCTGATAACAGTGCGTATTTCACTT CCACCCAAGTCAACTTTCTCTACATATAACGAGT GCATCAGGATGTCGATTTACATCTATAATTCGACCGACACGTAGATCCAGACGACCAATATCAACAGGCTTCTCAGCAGATTGTGGTTTTCCATCTGGTATTTTACGTTCGGTCTTCGGATTTTTAGTTTTCACTGAGTCTGTTTGT ] [-] EMBL CD145133 [ ACATGTATCTGGAGAGCTTGCACACATCAACATTGCTTCTGATTCAACACCACGCATTTTTGCTGGCTTGAGGTTGCAGAGAAATATCCCGACTCGATTTTGTAGTGATTCGATAGGCAGATATTTCACCAGCCCGCTGACAACAGTGCGTATTTCACTT CCACCCAAGTCAACTTTCTCTACATATAACGAGTCAGCATCAGGATGTCGATTTACATCTATAATTCGACCGACACGTAGATCCAGACGACCAATATCAACAGGCTTCTCAGCAGATTGTGGTTTTCCATCTGGTATTTTACGTTCGGTCTTCGGATTTTTAGTTTTCACTGAGTCTGTTTGT ] [-] EMBL CD145149 [ CCACGCATTTTTGCTGGCTTGAGGTTGCAGAGAAATATCCCGACTCGATTTTGTAGTGATTCGATAGGCAGATATTTCACCAGCCCGCTGACAACAGTGCGTATTTCACTT CCACCCAAGTCAACTTTCTCTACATATAACGAGTCAGCATCAGGATGTCGATTTACATCTATAATTCGACCGACACGTAGATCCAGACGACCAATATCAACAGGCTTCTCAGCAGATTGTGGTTTTCCATCTGGTATTTTACGTTCGGTCTTCGGATTTTTAGTTTTCACTGAGTCTGTTTGT ] [-] EMBL CD160652 [ ACTCGATTTTGCAGTGATTCGATAGGCAGATATTTCACCAGCCCGCTGACAACAGTGCGTATTTCACTT CCACCCAAGTCAACTTTCTCTACATATAACGAGTCAGCATCAGGATGTCGATTTACATCTATAATTCGACCGACACGTAGATCCAGACGACCAATATCAACAGGCTTCTCAGCAGATTGTGGTTTTCCATCTGGTATTTTACGTTCGGTCTTCGGATTTTTAGTTTTCACTGAGTCTGTTTGTACCTCTGTCCTCTGTTCGGGTTGCTCTTCAGGCACTAGTTTTTTTTTCAGACAATGGTCCGATTTCCAGTGAATTTCCATTCAAATTAGAAACACTGGATACAGCCTTGACAGATGGTAAATGATATTGTTGGTTTAACCCAAGAAGTAGCTCCTGTTGAATAACTGATTCTTTTAAC ] [+] EMBL CD152703 [ CTT GCGCCCAAGTCAACTTTCTCTACATATAACGAGTCAGCATCAGGATGTCGACTGAGATCTATAATTCGACCGACACGTAGATCCAGACGACCAATATCAACAGGCTTCTCAGCAGATTGTGGTTTTCCATCTGGTATTTTACGTTCGGTCTTCGGATTTTTAGTTTTCACTGAGCCTGTTTG ] [+] EMBL CD152863 [ CTT CCACCCAAGGCGACTTTCTCTACATATAACGAGTCAGCATCAGGATGTCGATTTACATCTATAATTCGACCGACACGTAGATCCAGACGACCAATATCAACAGGCTTGTCAGCAGATTGTGGTTTTCCATCTGGGATTTTACGTTCGGACTTCGGATTTTTAGTATTCACTGAGTCTGTTTGTACCTCTGTCCTCTGCTCGGGTTGCTCTTCAGGCACTAG TTTTTTTTCAGACAATGGTCCGATTTCCAGTGAATTTCCATTCAAATTAGAAACACTGGATACAGCCTTGACAGATGGTAAATGATATTGc ] [+] EMBL CD152647 [ CTT CCACCCAAGGCAACTTTCTCTACATATAACGAGTCAGCATCAGGATGTCGATTTACATCTATAATTCGACCGACACGTAGATCCAGACGACCAATATCAACAGGCTTCTCAGCAGATTGCGGTTTTCCATCTGGTATTTTACGTTCGGTCTTCGGATTTGTAGTGTTCACTGAGTCTGTTTG ] [+] EMBL CD152609 [ CTT CCACCCAAGTCAACTTTCTCTACATATAACGAGTCAGCATCAGGATGTCGATTTACATCTATAATTCGACCGACACGTAGATCCAGACGACCAATATCAACAGGCTTCTCAGCAGATTGTGGTTTTCCATCTGGTATTTTACGTTCGGTCTTCGGATTTTTAGTTTTCACTGAGTCTGTTTG ] [+] EMBL CD145003 [ CTT CCACCCAAGTCAACTTTCTCTACATATAACGAGTCAGCATCAGGATGTCGATTTACATCTATAATTCGACCGACACGTAGATCCAGACGACCAATATCAACAGGCTTCTCAGCAGATTGTGGTTTTCCATCTGGTATTTTACGTTCGGTCTACGGATTTTTAGTTTTCACTGAGTCTGTTTG ] [+] EMBL CD145014 [ CTT CCACCCAAGTCAACTTTCTCTACATATAACGAGTCAGCATCAGGATGTCGATTTACATCTATAATTCGACCGACACGTAGATCCAGACGACCAATATCAACAGGCTTCTCAGCAGATTGTGGTTTTCCATCTGGTATTTTACGTTCGGTCTTCGGATTTTTAGTTTACACTGAGTCTGTTTG ] [-] EMBL CD152870 [ TT CCACCCAAGTCAATTTTCTATACATATAACGAGTCAGCATCAGGATGTCGATTCACATCTATAATTCGACCGACACGTAGATCCAGACGACCAATATCAACAGGCTTCTCAGCAGATTGTGGTTTTCCATCTGGTATTTTACGTTCGGTCTTCGGATTTTTAGTTTTCCCCCAGTCTGTTTGT ] [-] EMBL CD152661 [ tc CCACCCAAGTCAACTTTCTCTACGTATAACGAGTCAGCATCAGGATGTCGATTTACATCTATAATTCGACCGACACGTAGATCCAGACGACCAATATCAACAGGCTTCTCAGCAGATTGTGGTTTTCCATCTGGTATTTTACGTTCGGTCTTCGGATTTTTAGTTTTCACTGAGTCTGTTTGTACCTCTGTCCTCTGTTCGGGTTGCTCTTCAGGCACTAG TTTTTTTTCAGACAATGGTCCGATTTCCAGTGAATTTCCATTCAAATTAGAAACACTGGATACAGCCTTGACAGATGGTAAATGATATTGTTGGTTTAACCCAAGAAGTAGCTCCTGTTGAATAACTGATTCTTTTAACGATTTTATCCTGTGCAACAACTGTTGA TTCTGTACTTTGAGGCATGCTTCAACATAGTTTACCGCATCTGGTGTCGCAATTGATTCCAAATGTTTTAACTTGTCAGAGATAGACTGCAATAGCTTATTCATCCTCGCAACCCGACAGTACCGA ] [-] EMBL CD145067 [ tc CCACCCAAGTCAACTTTCTCTACATATAACGAGTCAGCATCAGGATGTCGATTTACATCTATAATTCGACCGACACGTAGATCCAGACGACCAATATCAACAGGCTTCTCAGCAGATTGTGGTTTTCCATCTGGTATTTTACGTTCGGTCTTCGGATTTTTAGTTTTCACTGAGTCTGTTTGT ] [-] EMBL CD098023 [ ATCTATAATTCGACCGACACGTAGATCCAGACGACCAATATCAACAGGCTTCTCAGCAGATTGTGGTTTTCCATCTGGTATTTTACGTTCGGTCTTCGGATTTTTAGTTTTCACTGAGTCTGTTTGTACCTCTGTCCTCTGTTCGGGTTGCTCTTCAGGCACTAG TTTTTTTTCAGACAATGGTCCGATTTCCAGTGAATTTCCATTCAAATTAGAAACACTGGATACAGCCTTGACAGATGGTAAATGATATTGTTGGTTTAACCCAAGAAGTAGCTCCTGTTGAATAACTGATTCTTTTAACGATTTTATCCTGTGCAACAACTGTTGA TTCTGTACTTTGAGGCATGCTTCAGCATAGTTTACCGCATCTGGTGCCGCAATTGATTCCAAATGTTTTAACTTGTCAGAGATAGACTGCAATAGCTTATTCATCCTCGCAACCCGACAGTACCGAATAATTTTATACAGCGCGCCAAACGGTCCAAATGG] [-] EMBL CD134345 [ GACAATGGTCCGATTTCCAGTGAATTTCCATTCAAATTAGAAACACTGGATACAGCCTTGACAGATGGTAAATGATATTGTTGGTTTAACCCAAGAAGTAGCTCCTGTT AATAACTGATTCTTTTAACGATTTTATCCTGTGCAACAACTGTTGATTTCTGTACTTTGAGGCATGCTTCAACATAGTTTACCGCATCTGGTGTCGCAATTGATTCCAAATGTTTTAACTTGTCAGAGATAGACTGCAATAGC ] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||