These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10983#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 15 consensus length = 1631 fasta sequence [CCTCCGAGGCCANAATTCGGCACGAGGAGCAAAAAGCAATGTTTTGTTCGAACATAAGGTCGTTGGGAGTACCCAGCTTTGCCAAGTGGCTGACACATTTTGTCCGTCCGTCTTCTCTTTCAAAGAATTACTAACTGATAGTAAGAAATGGTCCTGGTGTTTCTTCTTCCCGTGTCCTTTCCAATCTACCAGATAGCCGGCAGATCCCTTCAAACTCTGAGATCTGTTCATCGTTCTTCTCCAACCGATTTGGCGGCACAGCCAGTGACGGTCTTACAACGGATAGAATAAGTCACCCAACCGTCACTCACTCTAACTCACCTACATCTCCATTCGACAATATGTTGACCTCTACACATTCGTTTGAAAATTTCCTGCCATCAAGTTTAAGACAATTAACACAGTCTGGACAATCTCATATACAAAATTCGTCAGGTCCCTCACTAAACCCATGTCAGTCTGATACTCCACTGCCTCCCGAAATGCGACCTGACATTCACCTTACCCCTTTCAGTGACTCCCAGTGTGTTCTTCCTATTACTGCCTCTCAATTCTATTCCAGTCATCAGTTTGAAAATACAAAAAAACTCCAGGCCTCTGGTAGCCTTAAAGTCGCCCCCTGGATTCTTGTCCCACCAGTTCCTGAGGGCACTGCAGCTCATATGAGAACAGGAAGAGTTCATGAAGCTAAGCCAAACTTGTTCAACAACCCTTCATTTGGTCCCATAGTAATTGATGATGACTTCAAGCACGCCCTGCACAGTAAACTTCAAGCTTGCTTGTTCACGGCTGATGAGTCCACAAAGGAAAAATTACCTCGTAATCTAGGAGCTTACACTGACGTCGTTCCTCTAGAAGTTTTAGACCAACCAAGAGTATCAGTTACATTTGGCCTTCCTGGAGTTTGTTTTAAAGCTTGGTCTCCTCGATTTAATCGATATATGCTTCTTCGACGCATAATTTTACCACATGATCATGAAGCAGCTTTAGCACCTGATGCTTTTTATTTAGCTAAACAACTATCTGATTTAAATCATTCTGCTATTGTTGGGTTTCGGGATGTATTTTTCACTGATGCATTTGCTGATAACTCGGTTATCTTGGTTTATGAATACATACCTTGTTCATCAACTCTACAACAAATTCATATGAGTGATCCATTGAAATTAACTAGTTTTACTTCGCCTTTCAGTATTGGTCGCTCAGTGTTACCCCATAGTGCCATAAAAAATGCTCCATCTGATCTCGGAATGCCCCATGAGTCTGTTATGTGGTCATATTTAATCCAATTAACCAGTGGTTTGCGTTTTATTCACCAGACGTTTCACCGATCATGTGGTATACTGGATCCTACTAAAGTGTTATTACAAGACGGACCGCGTTTGCGAATCAATTGTTTTGGTTTAAAGGATATTCTGTTCTATTCTGCACAAGATACTAATTTAGTGGAAAGTCAGGCAGATGACTTTATACAACTTGGCAAATTAATGATAGGAGTTGCTTGTGGTACAGTTGCAGCTGTACAGGCTAGTCAACGAGCTTCTTCATTCAATCTACTTCAACGTGCATATCGACCAGAATTAGTCACTCTTATTCGAAGTTTAGTATCACGACAGATATCAGGAGCAGAT] [+] EMBL CD081959 [CCTCCGAGGCCANAATTCGGCACGAGGAGCAAAAAGCAATGTTTTGTTCGAACATAAGGTCGTTGGGAGTACCCAGCTTTGCCAAGTGGCTGACACATTTTGTCCGTCCGTCTTCTCTTTCAAAGAATTACTAACTGATAGTAAGAAATGGTCCTGGTGTTTCTTCTTCCCGTGTCCTTTCCAATCTACCAGATAGCCGGCAGATCCCTTCAAACTCTGAGATCTGTTCATCGTTCTTCTCCAACCGATTTGGCGGCACAGCCAGTGACGGTCTTACAACGGATAGAATAAGTCACCCAACCGTCACTCACTCTAACTCACCTACATCTCCATTCGACAATATGTTGACCTCTACACATTCGTTTGAAAATTTCCTGCCATCAAGTTTAAGACAATTAACACAGTCTGGACAATCTCATATACAAAATTCGTCAGGTCCCTCACTAAACCCATGTCAGTCTGATACTCCACTGCCTCCCGAAATGCGACCTGACATTCACCTTACCCCTTTCAGTGACTCCCAGTGTGTTCTTCCTATTACTGCCTCTCAATTCTATTCCAGTCATCAGTTTGAAAATACAAAAAAACTCCAGGCCTCTGGTAGCCTTAAAGTCGCCCNCTGGATTCTTGTCCCACCAGTTCCTGAGGGCACTGCAGCTCATATG ] [-] EMBL CD155686 [ TGCCAAGTGGCTGACACATTTTGTCCGTCCGTCTTCTCTTTCAAAGAATTACTAACTGATAGTAAGAAATGGTCCTGGTGTTTCTTCTTCCCGTGTCCTTTCCAATCTACCAGATAGCCGGCAGATCCCTTCAAACTCTGAGATCTGTTCATCGTTCTTCTCCAACCGATTTGGCGGCACAGCCAGTGACGGTCTTACAACGGATAGAATAAGTCACCCAACCGTCACTCACTCTAACT ] [-] EMBL CD155815 [ TGCCAAGTGGCTGACACATTTTGTCCGTCCGTCTTCTCTTTCAAAGAATTACTAACTGATAGTAAGAAATGGTCCTGGTGTTTCTTCTTCCCGTGTCCTTTCCAATCTACCAGATAGCCGGCAGATCCCTTCAAACTCTGAGATCTGTTCATCGTTCTTCTCCAACCGATTTGGCGGCACAGCCAGTGACGGTCTTACAACGGATAGAATAAGTCACCCAACCGTCACTCACTCTAACTCACCTACATCTCCATTCGACAATATGTTGACCTCTACACATTCGTTTGAAAATTTCCTGCCATCAAGTTTAAGACAATTAACACAGTCTGGACAATCTCATATACAAAATTCGTCAGGTCCCTCACTAAACCCATGTCAGTCTGATA ] [-] EMBL CD182889 [ CTTACAACGGATAGAATAAGTCACCCAACCGTCACTCACTCTAACTCACCTACATCTCCATTCGACAATATGTTGACCTCTACACATTCGTTTGAAAATTTCCTGCCATCAAGTTTAAGACAATTAACACAGTCTGGACAATCTCATATACAAAATTCGTCAGGTCCCTCACTAAACCCATGTCAGTCTGATA ] [+] EMBL CD199768 [ ATGCGACCTGACATTCACCTTACCCCTTTCAGTGACTCCCAGTGTGTTCTTCCTGTTACTGCCTCTCAATTCTATTCCAGTCATCAGTTTGAAAATACAAAAAAACTCCAGGCCTCTGGTAGCCTTAAAGTCGCCCCCTGGATTCTTGTCCCACCAGTTCCTGAGGGCACTGCAGCTCATATGAGAACAGGAAGAGTTCATGAAGCTAAGCCAAACTTGTTCAACAACCCTTCATTTGGTCCCATAGTAATTGATGATGACTTCAAGC ] [+] EMBL CD199679 [ ATGCGACCTGACATTCACCTTACCCCTTTCAGTGACTCCCAGTGTGTTCTTCCTATTACTGCCTCTCAATTCTATTCCAGTCATCAGTTTGAAAATACAAAAAAACTCCAGGCCTCTGGTAGCCTTAAAGTCGCCCCCTGGATTCTTGTCCCACCAGTTCCTGAGGGCACTGCAGCTCATATGAGAACAGGAAGAGTTCATGAAGCTAAGCCAAACTTGTTCAACAACCCTTCATTTGGTCCCATAGTAATTGATGATGACTTCAAGC ] [-] EMBL CD199751 [ TGCGACCTGACATTCACCTTACCCCTTTCAGTGACTCCCAGTGTGTTCTTCCTATTACTGCCTCTCAATTCTATTCCAGTCATCAGTTTGAAAATACAAAAAAACTCCAGGCCTCTGGTAGCCTTAAAGTCGCCCCCTGGATTCTTGTCCCACCAGTTCCTGAGGGCACTGCAGCTCATATGAGAACAGGAAGAGTTCATGAAGCTAAGCCAAACTTGTTCAACAACCCTTCATTTGGTCCCATAGTAATTGATGATGACTTCAAGCA ] [-] EMBL CD199756 [ TGCGACCTGACATTCACCTTACCCCTTTCAGTGACTCCCAGTGTGTTCTTCCTATTACTGCCTCTCAATTCTATTCCAGTCATCAGTTTGAAAATACAAAAAAACTCCAGGCCTCTGGTAGCCTTAAAGTCGCCCCCTGGATTCTTGTCCCACCAGTTCCTGAGGGCACTGCAGCTCATATGAGAACAGGAAGAGTTCATGAAGCTAAGCCAAACTTGTTCAACAACCCTTCATTTGGTCCCATAGTAATTGATGATGACTTCAAGCA ] [-] EMBL CD199759 [ TGCGACCTGACATTCACCTTACCCCTTTCAGTGACTCCCAGTGTGTTCTTCCTATTACTGCCTCTCAATTCTATTCCAGTCATCAGTTTGAAAATACAAAAAAACTCCAGGCCTCTGGTAGCCTTAAAGTCGCCCCCTGGATTCTTGTCCCACCAGTTCCTGAGGGCACTGCAGCTCATATGAGAACAGGAAGAGTTCATGAAGCTAAGCCAAACTTGTTCAACAACCCTTCATTTGGTCCCATAGTAATTGATGATGACTTCAAGCA ] [+] EMBL CD136841 [ GAAGAGTTCATGAAGCTAAGCCAAACTTGTTCAACAACCCTTCATTTGGTCCCATAGTAATTGATGATGACTTCAAGCACGCCCTGCACAGTAAACTTCAAGCTTGCTTGTTCACGGCTGATGAGTCCACAAAGGAAAAATTACCTCGTAATCTAGGAGCTTACACTGACGTCGTTCCTCTAGAAGTTTTAGACCAACCAAGAGTATCAGTTACATTTGGCCTTCCTGGAGTTTGTTTTAAAGCTTGGTCTCCTCGATTTAATCGATATATGCTTCTTCGACGCATAATTTTACCACATGATCATGAAGCAGCTTTAGCACCTGATGCTTTTTATTTAGCTAAACAACTATCTGATTTAAATCATTCTGCTATTGTTGGGTTTCGGGATGTATTTTTCACTGATGCATTTGCTGATAACTCGGT ] [-] EMBL CD136884 [ AAGAGTTCATGAAGCTAAGCCAAACTTGTTCAACAACCCTTCATTTGGTCCCATAGTAATTGATGATGACTTCAAGCACGCCCTGCACAGTAAACTTCAAGCTTGCTTGTTCACGGCTGATGAGTCCACAAAGGAAAAATTACCTCGTAATCTAGGAGCTTACACTGACGTCGTTCCTCTAGAAGTTTTAGACCAACCAAGAGTATCAGTTACATTTGGCCTTCCTGGAGTTTGTTTTAAAGCTTGGTCTCCTCGATTTAATCGATATATGCTTCTTCGACGCATAATTTTACCACATGATCATGAAGCAGCTTTAGCACCTGATGCTTTTTATTTAGCTAAACAACTATCTGATTTAAATCATTCTGCTATTGTTGGGTTTCGGGATGTATTTTTCACTGATGCATTTGCTGATAACTCGGTT ] [+] EMBL CD188890 [ AAACAACTATCTGATTTAAATCATTCTGCTATTGTTGGGTTTCGGGATGTATTTTTCACTGATGCATTTGCTGATAACTCGGTTATCTTGGTTTATGAATACATACCTTGTTCATCAACTCTACAACAAATTCATATGAGTGATCCATTGAAATTAACTAGTTTTACTTCGCCTTTCAGTATTGGTCGCTCAGTGTTACCCCATAGTGCCATAAAAAATGCTCCATCTGATCTCGGAATGCCCCATGAGTCTGTTATGTGGTCATATTTAATCCAATTAACCAGTGGTTTGCGTTTTATTCACCAGACGTTTCACCGATCATGTGGTATACTGGATCCTACTAAAGTGTTATTACAAGACGGACCGCGTTTGCGAATCAATTGTTTTGGTTTAAAGGATATTCTGTTCTATTCTGCACAAGATACTATTTTAGTGGAAAGTCAGGCAGATGACTTTATACAACTTGGCAAATTAATGATAGGAGTTGCTTGTGGTACAGTTGCAGCTGTACAGGCTAGTCAACGAGCTTCTTCATTCAATCTACTTCAACG ] [-] EMBL CD188785 [ TACATACCTTGTTCATCAACTCTACAACAAATTCATATGAGTGATCCATTGAAATTAACTAGTTTTACTTCGCCTTTCAGTATTGGTCGCTCAGTGTTACCCCATAGTGCCATAAAAAATGCTCCATCTGATCTCGGAATGCCCCATGAGTCTGTTATGTGGTCATATTTAATCCAATTAACCAGTGGTTTGCGTTTTATTCACCAGACGTTTCACCGATCATGTGGTATACTGGATCCTACTAAAGTGTTATTACAAGACGGACCGCGTTTGCGAATCAATTGTTTTGGTTTAAAGGATATTCTGTTCTATTCTGCACAAGATACTAATTTAGTGGAAAGTCAGGCAGATGACTTTATACAACTTGGCAAATTAATGATAGGAGTTGCTTGTGGTACAGTTGCAGCTGTACAGGCTAGTCAACGAGCTTCTTCATTCAATCTACTTCAACGTGCATATCGACCAGAATTAGTCACTCTTATTCGAAGTTTAG ] [+] EMBL CD112829 [ CCATAGTGCCATAAAAAATGCTCCATCTGATCTCGGAATGCCCCATGAGTCTGTTATGTGGTCATATTTAATCCAATTAACCAGTGGTTTGCGTTTTATTCACCAGACGTTTCACCGATCATGTGGTATACTGGATCCTACTAAAGTGTTATTACAAGACGGACCGCGTTTGCGAATCAATTGTTTTGGTTTAAAGGATATTCTGTTCTATTCTGCACAAGATACTAATTTAGTGGAAAGTCAGGCAGATGACTTTATACAACTTGGCAAATTAATGATAGGAGTTGCTTGTGGTACAGTTGCAGCTGTACAGGCTAGTCAACGAGCTTCTTCATTCAATCTACTTCAACGTGCATATCGACCAGAATTAGTCACTCTTATTCGAAGTTTAGTATCACGACAGATATCAGGAGCAGAT] [+] EMBL CD180494 [ ATGCTCCATCTGATCTCGGAATGACCCATGAGTCTGTTATGTGGTCATATTTAATCCAATTAACCAGTGGTTTGCGTTTTATTCACCAGACGTTTCACCGATCATGTGGTATACTGGATCCTACTAAAGTGTTATTACAAGACGGACCGCGTTTGCGAATCAATTGTTTTGGTTTAAAGGATATTCTGTTCTATTCTGCACAAGATACTAATTTAGTGGAAAGTCAGGCAGATGACTTTATACAACTTGGCAAATTAATGATAGGAGTTGCTTGTGGTACAGTTGCAGCTGTACAGGCTAGTCAACGAGCTTCTTCATTCAATCTACTTCAAGGTGCATATCGACCAGAATTAGTCACTCTTA ] consensusID : consensus_10983#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 828 fasta sequence [CCTGAACATTCTCTTAATAGAAATTGCGTAAGATACGAAGTTTCATCATACTGGGAAAGTCATGACGTCCAACTACGTTCATGGTGGTGCAGGGATCCAGAACAGTATGCTATCGTACACTTTGAAAAATCTGTCACTCGGGTCCAATCAAATTGCTCAGATGAATGACCAAACTAACTCATTGTGTATGACTCCACCAGCTACGCAAATGAATTTTCTTCGTCCTATTCCTGGTGCATCTAGTGAGGCTGCTTTCCCAAACACACATCGTTCAGCTTCTGGTCGTACGTTGGGGATAGCAGATTTCCTCTCACTGAATACTACTCCAACTAACAGACCTTCTGTATTGTCCACTGTATCTATTTCGAAAGCATCACTCGCTCCCCAAAATGGACATCCGACGAGAGCTCCTGAAAGAGTGGCTCTAACGTCGAAAGCAGTGGTTCCGGGAAACCATGGATTTGCCAGCATGTTCCGTCCCCGAGGTCCTGGTGTTTCTTCTTCCCGTGTCCTTTCCAATCTACCAGATAGCCGGCAGATCCCTTCAAACTCTGAGATCTGTTCATCGTTCTTCTCCAACCGATTTGGCGGCACAGCCAGTGACGGTCTTACAACGGATAGAATAAGTCACCCAACCGTCACTCACTCTAACTCACCTACATCTCCATTCGACAATATGTTGACCTCTACACATTCGTTTGAAAATTTCCTGCCATCAAGTTTAAGACAATTAACACAGTCTGGACAATCTCATATACAAAATTCGTCAAGTCCCTCACTAANACCATGTCAGTCTGATACTCCACTGCCTNCCGAAATGCGACCTGA] [+] EMBL CD161267 [CCTGAACATTCTCTTAATAGAAATTGCGTAAGATACGAAGTTTCATCATACTGGGAAAGTCATGACGTCCAACTACGTTCATGGTGGTGCAGGGATCCAGAACAGTATGCTATCGTACACTTTGAAAAATCTGTCACTCGGGTCCAATCAAATTGCTCAGATGAATGACCAAACTGACTCATTGTGTATGACTCCACCAGCTACGCAAATGAATTTTCTTCGTCCTATTCCTGGTGCATCTAGTGAGGCTGCTTTCCCAAACACACATCGTTCAGCTTCTGGTCGTACGTTGGGGATAGCAGATTCCCTCTCACTGAATACTACTCCAACTAACAGACCTTCTGTATTGTCCACTGTATCTATTTCGAAAGCATCACTCGCTCCCCAAAATGGACATCCGACGAGAGCTCCTGAAAGAGTGGCTCTAACGTCGAAAGCAGTGGTTCCGGGAAACCATGGATTTGCCAGCATGTTCC ] [+] EMBL CD195190 [ TCTCTTAATCTACATCGCGTTAGATACGACTTGTCATCATACTGGGAAAGGCGTGACTTTCAACTACGGACATGGTGGTGCAAGGATCCA AACAGCAAGCTATCGTACACTGTGAAAAATCTGTTGCTCGGGTCCAATCAAATTGCTCATATGAATGACCAAACTAACTCATTGTGTATGACTCCACCAGCTACTCATATGAATATTCTTCGTCCTATTCCTGGTGCATCTAGTGAGGCTGCTTTCCCAAACACACATCGTTCAGCTTCTGGTCGTACGTTGGGGATAGCAGATTTCCTCTCACTGAATACTACTCCAACTAACAGACCTTCTGTATTGTCCACTGTATCTATTTCGAAAGCATC ] [+] EMBL CD114182 [ ACACTTTGAAAAATCTGTCACTCGGGTCCAATCAAATTGCTCAGATGAATGACCAAACTAACTCATTGTGTATGACTCCACCAGCTACGCAAATGAATTTTCTTCGTCCTATTCCTGGTGCATCTAGTGAGGCTGCTTTCCCAAACACACATCGTTCAGCTTCTGGTCGTACGTTGGGGATAGCAGATTTCCTCTCACTGAATACTACTCCAACTAACAGACCTTCTGTATTGTCCACTGTATCTATTTCGAAAGCATCACTCGCTCCCCAAAATGGACATCCGACGAGAGCTCCTGAAAGAGTGGCTCTAACGTCGAAAGCAGTGGTTCCGGGAAACCATGGATTTGCCAGCATGTTCCGTCCCCGAGGTCCTGGTGTTTCTTCTTCCCGTGTCCTTTCCAATCTACCAGATAGCCGGCAGATCCCTTCAAACTCTGAGATCTGTTCATCGTTCTTCTCCAACCGATTTGGCGGCACAGCCAGTGACGGTCTTACAACGGATAGAATAAGTCACCCAACCGTCACTCACTCTAACTCACCTACATCTCCATTCGACAATATGTTGACCTCTACACATTCGTTTGAAAATTTCCTGCCATCAAGTTTAAGACAATTAACACAGTCTGGACAATCTCATATACAAAATTCGTCAAGTCCCTCACTAANACCATGTCAGTCTGATACTCCACTGCCTNCCGAAATGCGACCTGA] [-] EMBL CD114261 [ CACTTTGAAAAATCTGTCACTCGGGTCCAATCAAATTGCTCAGATGAATGACCAAACTAACTCATTGTGTATGACTCCACCAGCTACGCAAATGAATNTTCTTCGTCCTATTCNTGGTGCATCTAGTGAGGCTGCTTTCCCAAACACACATCGTTCAGCTTCTGGTCGTACGTTGGGGATAGCAGATTTCCTCTCACTGAATACTACTCCAACTAACAGACCTTCTGTATTGTCCACTGTATCTAATTTGAAAGCGTCACTCGCTCCCCAAAATGGACATCCGACGAGAGCTCCTGAAAGAGTGGCTCTAACGTCGAAAGCAGTGGTTCCGGGAAACCATGGATTTGCCAGCATGTTCCGTCCCCAAGGTCCTGGTGTTTATTCTTCCAGTGTCCTTTCCAATCTACCAGATAGCCGGCAGATCCCTTCAAACTGTGAGATATGTTCATCGTTCTTCTCCAACCGATTTGGCGGCACAGCCAGTGACGGTCTTACAACGGATAGAATAAGTCACCCATCCGTCACTCACTGTAACTCACCTACATCTCCATTCGACAATATGTTGACCTCTACACATTCGTTTGAAAATTTCCCGCCATCAAGTTTAAGACAATTAACACAGTCTGGAC ] [+] EMBL CD125401 [ TGGGTTTGCCAGCATGTTCCGTCCCCGAGGTCCTGGTGTTTCTTCTTCCCGTGTCCTTTCCAATCTACCAGATAGCCGGCAGATCCCTTCAAACTCTGAGATCTGTTCATCGTTCTTCTCCAACCGATTTGGCGGCACAGCCAGTGACGGTCTTACAACGGATAGAATAAGTCACCCAACCGTCACTCACTCTAACTCACCTACATCTCCATTCGACAATATGTTGACCTCTACACATTCGTTTGAAAATTTCCTGCCATCAAGTTTAAGACAATTAACACAGTCTGGACAATCTCATATACAAAATTCGTCAGGTCCCTCACTAAACCCATGT ] consensusID : consensus_10983#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 530 fasta sequence [GAATCTCGACAGTGTGCAACGTGCATATCGACCAGAATTAGTCACTCTTATTCGAAGATTTAGTATCAGGACAGATATCAGGAGCAGATCAACTAATGCGAGCTACTGCACCATTTGCATTCGATCACTTAACAAGGTTATATGATCACTCAGATCTCTTGGAAAGTCAATTATTATTGGAACTGGAATGTGACAGACTTTTCCGACTCATCTGTAAACTTCAGTCTATTGTGGAGCGTTGCGATCAGGGTACTTCCCCAGAATGGTCTGAAACAGGTGATCGTTATATGTTGAAATTATTTCGAGATTTCGTATTTCACCAATCCGATCCCCTTGGTGCTCCATACTTAGATCTTGCACATATTATTACTACACTGAACAAGGTCGAAGCTGCTTCACCTGAACGTCTTTGTCTAGTCAGCCGTGATAGTCAAAATGTGATTATTGTCACCTATGCAGATATTAAACAATGGTTAGATACAAGCTTTTCTTATCTAGTGGATAAACATCGTCGGAGTCAATGTGAACTA] [+] EMBL CD061238 [GAATCTCGACAGTGTGCAACGTGCATATCGACCAGAATTAGTCACTCTTATTCGAAGATTTAGTATCAGGACAGATATCAGGAGCAGATCAACTAATGCGAGCTACTGCACCATTTGCATTCGATCACTTAACAAGGTTATATGATCACTCAGATCTCTTGGAAAGTCAATTATTATTGGAACTGGAATGTGACAGACTTTTCCGACTCATCTGTAAACTTCAGTCTATTGTGGAGCGTAGCGATCAGGGTACTTCCCCAGAATGGTCTGAAACAGGTGATCGTTATATGTTGAAATTATTTCGAGATTTCGTATTTCACCAATCCGATCCCCTTGGTGCTCCAT ] [+] EMBL CD155303 [ ATCAACTAATGCGAGCTACTGCACCATTTGCATTCGATCACTTAACAAGGTTATATGATCACTCAGATCTCTTGGAAAGTCAATTATTATTGGAACTGGAATGTGACAGACTTTTCCGACTCATCTGTAAACTTCAGTCTATTGTGGAGCGTTGCGATCAGGGTACTTCCCCAGAATGGTCTGAAACAGGTGATCGTTATATGTTGAAATTATTTCGAGATTTCGTATTTCACCAATCCGATCCCCTTGGTGCTCCATACTTAGATCTTGCACATATTATTACTACACTGAACAAGGTCGAAGCTGCTTCACCTGAACGTCTTTGTCTAGTCAGTCGTGATAGTCAAAATGTGATTATTGTCACCTATGCAGATATTAAACAATGGTTAGATACAAGCTTTTCTTATCTAGTGGATAAACATCGTCGGAGTCAATGTGAACTA] [+] EMBL CD130460 [ TGCGAGCTACTGCACCATTTGCATTCGATCACTTAACAGGGTTATATGATCACTCAGATCTCTTGGAAAGTCAATTATTATTGGAACTGGAATGTGACAGACTTTTCCGACTCATCTGTAAACTTCAGTCTATTGTGGAGCGTTGCGATCAGGGTACTCCCCCAGAATGGTCTGAAACAGGTGATCGTTATATGTTGAAATTATTTCGAGATTTCGTATTTCACCAATCCGATCCCCTTGGTGCTCCATACTTAGATCTTGCACATATTATTACTACAC ] [+] EMBL CD130403 [ CTGCACCATTTGCATTCGATCACTTAACAAGGTTATATGATCACTCAGATCTCTTGGAAAGTCAATTATTATTGGAACTGGAATGTGACAGACTTTTCCGACTCATCTGTAAACTTCAGTCTATTGTGGAGCGTTGCGATCAGGGTACTCCCCCAGAATGGTCTGAAACAGGTGATCGTTATATGTTGAAATTATTTCGAGATTTCGTATTTCACCAATCCGATCCCCTTGGTGCTCCATACTTAGATCTTGCACATATTATTACTACACTGAACAAGGTCGAAGCTGCTTCACCTGAACGTCTTTGTCTAGTCAGCCGTGATAGTCAAAATGTGATTATTGTCACCTATGCAGATA ] [-] EMBL CD130448 [ TGCACCATTTGCATTCGATCACTTAACAAGGTTATATGATCACTCAGATCTCTTGGAAAGTCAATTATTATTGGAACTGGAATGTGACAGACTTTTCCGACTCATCCGTAAACTTCAGTCTATTGTGGAGCGTTGCGATCAGGGTACTTCCCCAGAATGGTCTGAAACAGGTGATCGTTATATGTTGAAATTATTTCGAGATTTCGTATTTCACCAATCCGATCCCCTTGGTGCTCCATACTTAGATCTTGCACATATTATTACTACACTGAACAAGGTCGAAGCTGCTTCACCTGAACGTCTTTGTCTAGTCAGCCGTGATAGTCAAAATGTGATTATTGTCACCTATGCAGATATT ] [+] EMBL CD116715 [ ATGATCACTCAGATCTCTTGGAAGGTCAATTATTATTGGAACTGGAATGTGACAGACTTTTCCGACTCATCTGTAAACTTCAGTCTATTGTGGAGCGTTGCGATCAGGGTACTTCCCCAGAATGGTCTGAAACAGGTGATCGTTATATGTTGAAATTATTTCGAGATTTCGCATTTCACCAATCCGATCCCCCTGGTGCTCCATACTTAGATCTTGCACATATTATTACTACACTGAACAAGGTCGAAGCTGCTTCACCTGAACGTCTTTGTCTAGTCAGCCGTGATAGTCAAAATGT ] consensusID : consensus_10983#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 309 fasta sequence [TACACTTTGAAAAATCTGTCACTCGGGTCCAATCAAATTGCTCAGGTAAACGCGAATAACTGACACTTTACCGTTGTTATTTCTCGAACATGTCCTCGTGACAGATGAATGACCAAACTAACTCATTGTGTATGACTCCACCAGCTACGCAAATGAATTTTCTTCGTCCTATTCCTGGTGCATCTAGTGAGGCTGCTTTCCCAAACACACATCGTTCAGCTTCTGGTCGTACGTTGGGGATAGCAGATTTCCTCTCACTGAATACTACTCCAACTAACAGACCTTCTGTATTGTCCACTGTATCTATTT] [+] EMBL CD195123 [TACACTTTGAAAAATCTGTCACTCGGGTCCAATCAAATTGCTCAGGTAAACGCGAATAACTGACACTTTACCGTTGTTATTTCTCGAACATGTCCTCGTGACAGATGAATGACCAAACTAACTCATTGTGTATGACTCCACCAGCTACGCAAATGAATTTTCTTCGTCCTATTCCTGGTGCATCTAGTGAGGCTGCTTTCCCAAACACACATCGTTCAGCTTCTGGTCGTACGTTGGGGATAGCAGATTTCCTCTCACTGAATACTACTCCAACTAACAGACCTTCTGTATTGTCCACTGTATCTATTT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_10983#1 ------------------------------------------------------------ consensus_10983#3 ------------------------------------------------------------ consensus_10983#0 CCTCCGAGGCCANAATTCGGCACGAGGAGCAAAAAGCAATGTTTTGTTCGAACATAAGGT 60 consensus_10983#2 ------------------------------------------------------------ consensus_10983#1 ------------------------------------------------------------ consensus_10983#3 ------------------------------------------------------------ consensus_10983#0 CGTTGGGAGTACCCAGCTTTGCCAAGTGGCTGACACATTTTGTCCGTCCGTCTTCTCTTT 120 consensus_10983#2 ------------------------------------------------------------ consensus_10983#1 --------------------------------------------CCTGAACATTCTCTTA 16 consensus_10983#3 ------------------------------------------------------------ consensus_10983#0 CAAAGAATTACTAACTGATAGTAAGAAATGGTCCTGGTGTTTCTTCTTCCCGTGTCCTTT 180 consensus_10983#2 ------------------------------------------------------------ consensus_10983#1 ATAGAAATTGCGTAAGATACGAAGTTTCATCATACTGGGAAAGTCAT--GACGTCCAACT 74 consensus_10983#3 ------------------------------TACACTTTGAAAAATCT--GTCACTCGGGT 28 consensus_10983#0 CCAATCTACCAGATAGCCGGCAGATCCCTTCAAACTCTGAGATCTGTTCATCGTTCTTCT 240 consensus_10983#2 ----GAATCTCGACAGTGTGCAACGTGCATATCGACCAGA-ATTAGT----CACTCTTAT 51 ** * * * * * consensus_10983#1 ACGTTCATGGTGGTGCAGGGATCCAGAACAGTATGCTATCGTACACTTTG-------AAA 127 consensus_10983#3 CCAATCAAATTGCTCAGGTAAACGCGAATAA--------CTGACACTTTA-------CCG 73 consensus_10983#0 CCAACCGATTTGGCGGCACAGCCAGTGACGGTCTTACAACGGATAGAATAAGTCACCCAA 300 consensus_10983#2 TCGAA-GATTTAGTATCAGGACAGATATCAGGAGCAGATCAACTAATGCG--------AG 102 * * * * consensus_10983#1 AATCTG--TCACTCGGGTCCAATCAAATTGCT--CAGATGA-ATGACCAAACTAACTCAT 182 consensus_10983#3 TTGTTA--TTTCTCGAACATGTCCTCGTGAC----AGATGA-ATGACCAAACTAACTCAT 126 consensus_10983#0 CCGTCAC-TCACTCTAACTCACCTACATCTCCATTCGACAATATGTTGACCTCTACACAT 359 consensus_10983#2 CTACTGCACCATTTGCATTCGATCACTTAACA---AGGTTATATGATCACTCAGATCTCT 159 * * * * * *** * * * consensus_10983#1 T-GTGTATGACT------CCACCAG--CTACGCAAATGAATTTTCTTCGTCCTATTCCTG 233 consensus_10983#3 T-GTGTATGACT------CCACCAG--CTACGCAAATGAATTTTCTTCGTCCTATTCCTG 177 consensus_10983#0 TCGTTTGAAAATTTCCTGCCATCAAGTTTAAGACAATTAACACAGTCTGGACAATCTCAT 419 consensus_10983#2 TGGAAAGTCAATT----ATTATTGG----AACTGGAATGTGACAGACTTTTCCGACTCAT 211 * * * * * * * * * consensus_10983#1 GTGCAT--CTAGTGAGGCTGCTTTCCCAAACACACATCGTTCAGCTTCTGGTCGTACGTT 291 consensus_10983#3 GTGCAT--CTAGTGAGGCTGCTTTCCCAAACACACATCGTTCAGCTTCTGGTCGTACGTT 235 consensus_10983#0 ATACAAAATTCGTCAGG-TCCCTCACTAAACCCATGTCAGTCTGATACTCCAC-TGCCTC 477 consensus_10983#2 CTGTAAA---CTTCAGTCTATTGTGGAGCGTTGCGATCAGGGTACTTCCCCAGAATGGTC 268 * * * ** * ** * * * consensus_10983#1 GGGGATAGCAGATTTCCTCTCACTGAATACTACTCCAACTAACAGACCTTCTGTATTGTC 351 consensus_10983#3 GGGGATAGCAGATTTCCTCTCACTGAATACTACTCCAACTAACAGACCTTCTGTATTGTC 295 consensus_10983#0 CCGAAATGCGACCTGACATTCACCT--TACCCCTTTCAGTGAC--TCCCAGTGTGTTCTT 533 consensus_10983#2 TGAAACAGGTGATCGTTATATGTTGAAATTATTTCGAGATTTCGTATTTCACCAATCCGA 328 * * * * * * consensus_10983#1 CACTGTATCTATTTCGAAAGCATCACTCGCTCCCCAAAATGGACATCCGACGAGAGCTCC 411 consensus_10983#3 CACTGTATCTATTT---------------------------------------------- 309 consensus_10983#0 C-CTATTACTGCCTCTCAATTCTATTCCAGTCATCAGTTTGAAAATACAAAAAAACTCCA 592 consensus_10983#2 TCCCCTTGGTGCTCCATACTTAGATCTTGCACAT-ATTATTACTACACTGAACAAGGTCG 387 * * * consensus_10983#1 TGAAAG-AGTGGCTCTAACGTCGAAAGCAGTGGTTCCGGGAAACCATGGATTTGCCAGCA 470 consensus_10983#3 ------------------------------------------------------------ consensus_10983#0 GGCCTCTGGTAGCCTTAAAGTCGCCCCCTGGATTCTTGTCCCACCAGTTCCTGAGGGCAC 652 consensus_10983#2 AAGCTG-CTTCACCTGAACGTCTTTGTCTAGTCAGCCGTGATAGTCAAAA-TGTGATTAT 445 consensus_10983#1 TGTTCCGTCCCCGAGGTCCTGGTGTTTCTTCTTCCCGTGTCCTTTCCAATCTACCAGATA 530 consensus_10983#3 ------------------------------------------------------------ consensus_10983#0 TGCAGCTCATATGAGAACAGGAAGAGTTCATGAAGCTAAGCCAAACTTGTTCAACAACCC 712 consensus_10983#2 TGTCACCTATGC-AGATATTAAACAATGGTTAGATACAAGCTTTTCTTATCTAGTGGATA 504 consensus_10983#1 GCCGGCAGATCCCTTCAAACTCTGAGATCTGTTCATCGTTCTTCTCCAACCGATTTGGCG 590 consensus_10983#3 ------------------------------------------------------------ consensus_10983#0 TTCATTTGGTCCCATAGTAATTGATGATGACTTCAAGCACGCCCTGCACAGTAAACTTCA 772 consensus_10983#2 AACAT-------CGTCGGAGTCAATGTGAACTA--------------------------- 530 consensus_10983#1 GCACAGCCAGTGACGGTCTTACAACGGATAGAATAAGTCACCCAACCGTCACTCACTCTA 650 consensus_10983#3 ------------------------------------------------------------ consensus_10983#0 AGCTTGCTTGTTCACGGCTGATGAGTCCACAAAGGAAAAATTACCTCGTAATCTAGGAGC 832 consensus_10983#2 ------------------------------------------------------------ consensus_10983#1 ACTCACCTACATCTCCATTCGACAATATGTTGACCTCTACACATTCGTTTGAAAATTTCC 710 consensus_10983#3 ------------------------------------------------------------ consensus_10983#0 TTACACTGACGTCGTTCCTCTAGAAGTTTTAGACCAAC-CAAGAGTATCAGTTACATTTG 891 consensus_10983#2 ------------------------------------------------------------ consensus_10983#1 TGCCATCAAGTTTAAGACAATTAACACAGTCTGGACAATCTCATATACAAAATTCGTCAA 770 consensus_10983#3 ------------------------------------------------------------ consensus_10983#0 GCCTTCCTGGAGTTTGTTTTAAAGCTTGGTCTCCTCGATTTAATCGATATATGCTTCTTC 951 consensus_10983#2 ------------------------------------------------------------ consensus_10983#1 GTCCCTCACTAANACCATGTCAGTCTGATACTCCACTGCCTNCCGAAATGCGACCTGA-- 828 consensus_10983#3 ------------------------------------------------------------ consensus_10983#0 GACGCATAATTTTACCACATGATCATGAAGCAGCTTTAGCACCTGATGCTTTTTATTTAG 1011 consensus_10983#2 ------------------------------------------------------------ consensus_10983#1 ------------------------------------------------------------ consensus_10983#3 ------------------------------------------------------------ consensus_10983#0 CTAAACAACTATCTGATTTAAATCATTCTGCTATTGTTGGGTTTCGGGATGTATTTTTCA 1071 consensus_10983#2 ------------------------------------------------------------ consensus_10983#1 ------------------------------------------------------------ consensus_10983#3 ------------------------------------------------------------ consensus_10983#0 CTGATGCATTTGCTGATAACTCGGTTATCTTGGTTTATGAATACATACCTTGTTCATCAA 1131 consensus_10983#2 ------------------------------------------------------------ consensus_10983#1 ------------------------------------------------------------ consensus_10983#3 ------------------------------------------------------------ consensus_10983#0 CTCTACAACAAATTCATATGAGTGATCCATTGAAATTAACTAGTTTTACTTCGCCTTTCA 1191 consensus_10983#2 ------------------------------------------------------------ consensus_10983#1 ------------------------------------------------------------ consensus_10983#3 ------------------------------------------------------------ consensus_10983#0 GTATTGGTCGCTCAGTGTTACCCCATAGTGCCATAAAAAATGCTCCATCTGATCTCGGAA 1251 consensus_10983#2 ------------------------------------------------------------ consensus_10983#1 ------------------------------------------------------------ consensus_10983#3 ------------------------------------------------------------ consensus_10983#0 TGCCCCATGAGTCTGTTATGTGGTCATATTTAATCCAATTAACCAGTGGTTTGCGTTTTA 1311 consensus_10983#2 ------------------------------------------------------------ consensus_10983#1 ------------------------------------------------------------ consensus_10983#3 ------------------------------------------------------------ consensus_10983#0 TTCACCAGACGTTTCACCGATCATGTGGTATACTGGATCCTACTAAAGTGTTATTACAAG 1371 consensus_10983#2 ------------------------------------------------------------ consensus_10983#1 ------------------------------------------------------------ consensus_10983#3 ------------------------------------------------------------ consensus_10983#0 ACGGACCGCGTTTGCGAATCAATTGTTTTGGTTTAAAGGATATTCTGTTCTATTCTGCAC 1431 consensus_10983#2 ------------------------------------------------------------ consensus_10983#1 ------------------------------------------------------------ consensus_10983#3 ------------------------------------------------------------ consensus_10983#0 AAGATACTAATTTAGTGGAAAGTCAGGCAGATGACTTTATACAACTTGGCAAATTAATGA 1491 consensus_10983#2 ------------------------------------------------------------ consensus_10983#1 ------------------------------------------------------------ consensus_10983#3 ------------------------------------------------------------ consensus_10983#0 TAGGAGTTGCTTGTGGTACAGTTGCAGCTGTACAGGCTAGTCAACGAGCTTCTTCATTCA 1551 consensus_10983#2 ------------------------------------------------------------ consensus_10983#1 ------------------------------------------------------------ consensus_10983#3 ------------------------------------------------------------ consensus_10983#0 ATCTACTTCAACGTGCATATCGACCAGAATTAGTCACTCTTATTCGAAGTTTAGTATCAC 1611 consensus_10983#2 ------------------------------------------------------------ consensus_10983#1 -------------------- consensus_10983#3 -------------------- consensus_10983#0 GACAGATATCAGGAGCAGAT 1631 consensus_10983#2 -------------------- |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||