These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10991#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 18 consensus length = 1741 fasta sequence [ATGTCATGTTATGTACTTTAGCGAATTCACCCGGTTACAGCATTGATGATAATA-GTAAT-AATAATAA-CGATAG-TTTTCAAA-AGGGGAAGACATACATGAAGCCAAATGCAAG-TGTTGAGAATATGTTTAGTTTTGCCTGTTTGTAAAAGCTTAATGATTGATTAGAGTAAAATGAAACTGAAGATTAGTGTAATCTGGGATTACAATGTTAGAATTCTTTCGAAACCAATATAAATATTTAATTGATTATGGGTAAGCACTGATGATTCACTAGTATGTTTTGTTCT-GTTCTGTTTTATTTTATTATTTTGTGTTTGTCACAAAATGAATTAAAGTTGAATAGTGAAGTCTGCGCTGACGGCATCAGAATAAGCCATTTGAGTAGGTGAAGGATCAGAGAATTGCATCATTGTGTTGACAAAACCTATGAATTAGTCTGAAGAATTCACAATCGGTGGTGACATTAACGGCGTTGATGGCGGTGGAGGCAATGTCACATTTTGAGCAGCAGGCGCCATAG-ATGGTGGTGGCGGTGGTGGTGGTGGTGTCGACTGAGCAGATGGTGGAACATTCCGTGGTGATTCAACTGGTGTTTGTGTTTGTCCAGGTGGACTAATTGTTAATGGCTGTAACATTTGTATAGGCGGTGAAGGCTGGTCCGGACGTTGATTAGGTGATGCATTCAACCTGACCACTGTTGTATTC-GGCTGTTGCTGCTGTGGTGGTGGTGGTATTGGAGCTTGAAATTGAGGCCGAGGTGTTGGTTTTTGCATTGCTGGCGGTTGGAAATTTTGTTGTTGATGTTGTTGTGCCTGATACTGTTGTGTATTTGGTGCTGTTGTTTGTTTTTGATATTGAACATTATTCGGTTGAATATTTTGCGGTTGAGACTGTGGAGGTGGTGGTGTTCTTGGTGGTACACTAGAACGTCTATTAGTACGTAATTGTGATTGAACACGTGAATAGAGATTTTCTGTTTCTTCAACATCTACACCAGCAGCAGACCGACCACGATTTTCAAGTTCTCGTTCTAAACGTCGTAAATCAAGTGCTTGAGCCTTTGGTTTACGAAAAGCTGATGAAAGTTCATCGCTACATTTTACCTTTTTCAATTGTGCAAGTTTTTTGAATGGATTTTCTGGTTCAACATGACGTAGATCTGGTCGAAAATCTAATTGTGGTTCAATAATTAATATTGTTTCAGCTGCAGCTTCACCCA-TATTATTTCTTGCAACAGCTTTAATATGTAATTCACCAGGTGTACCAACACGATGAAATTCCAAATTACTAATACCACCATCTTGAAATATTCTCCAATTTCCGCCACCTCCAGACGAGGCTATCAATTCCCCATTAATATACCAGAATATTTTAGGCTTTGGATAACCACCTGCTTTAACAAGAAATTTAACTGGCGAACCTTCAGTGACAGTGACAGCAACAGGGAGAATATCGAATGATGGTGCACATGGCGGTTCTTCTTCATCTCTTTTAACTGTATCATAACCTGCCATGGCATCACTTTCCCAAGCATCCAAACTTTGAAGATATGAAATTGATTCTTTCGATAATACTGAACTAGTGACAATATGTTCATCCGCATTACATTGTAATTCAACCACATTGCTTTGTACTTGTCCTGCTGCATTACGTGTTAATGGCTGTAACATTTGTATAGGCGGTGAAGGCTGGTCCGGACGTTGATTAGGTGATGCATTCAACCTGACCACTGTTGTATTCG] [+] EMBL CD072944 [ATGTCATGTTATGTACTTTAGCGAATTCACCCGGTTACAGCATTGATGATAATA GTAAT AATAATAA CGATAG TTTTCAAA AGGGGAAGACATACATGAAGCCAAATGCAAG TGTTGAGAATATGTTTAGTTTTGCCTGTTTGTAAAAGCTTAATGATTGATTAGAGTAAAATGAAACTGAAGATTAGTGTAATCTGGGATTACAATGTTAGAATTCTTTCGAAACCAATATAAATATTTAATTGATTATGGGTAAGCACTGATGATTCACTAGTATGTTTTGTTCT GTTCTGTTTTATTTTATTATTTTGTGTTTGTCACAAAATGAATTAAAGTTGAATAGTGAAGTCTGCGCTGACGGCATCAGAATAAGCCATTTGAGTAGGTGAAGGATCAGAGAATTGCATCATTGTGTTGACAAAACCTATGAATTAGTCTGAAGAATTCACAATCGGTGGTGACATTAACGGCGTTGATGGCGGTGGAGGCAATGTCACATTTTGAGCAGCAGGCGCCATAA ATGGTGGTGGCGGTGGTGGTGct ] [+] EMBL CD071386 [ AATACGTAATCAATAATAAGCGATAGTTTTTCAAAGAGGGGAAGACATACATGAAGCCAAATGCAAG TGTTGAGAATATGTTTAGTTTTGCCTGTTTGTAAAAGCTTAATGATTGATTAGAGTAAAATGAAACTGAAGATTAGTGTAATCTGGGATTACAATGTTAGAATTCTTTCGAAACCAATATAAATATTTAATTGATTATGGGTAAGCACTGATGATTCACTAGTATGTTTTGTTCTGGTTCTGTTTTATTTTATTATTT ] [-] EMBL SMRAP159 [ anACATGAANCCAAATGCAAGTTATTGAGAATATGNNTAGTNTTGCCTGTTTGTAAAAACTTAATGATTGATTAGAGTGAAATGAAACTGAAGATTAGTGTAATCTGGGATTACAATGTTAGAATTCTTTCGAAACCAATATAAATATTTAATTGATTATGGATA ] [-] EMBL AI975542 [ TTCT GTTCTGTTATATTTTATGATTCTGTGTTTGTCACAAAATCAATTAAAGTTGAATAGTGAAGTATGCGCTGTCGGCATCAGAATGAGCCATTTGAGTAGGTGAAGGATCACAGTATTGCATCATTGTGTTGACAAAACCTATGAATTAGT AGAATTCACAAGCGGTGGTGACATTAACGGCGTTGATGCCGGTGTAGTCAATGTCACATTTTGAGCAGCAGGCGCCATAGTATGTTGGTGACGGTGGTGGTGGTGGTGTCGACTGAGCAGATGGTGGAACATTCCGTGGTGATTCACCTGGTGTTTGTGTTTG ] [+] EMBL CD165219 [ GTGAAGGATCAGAGAATTGCATCATTGTGTTGACAAAACCTATGAATTAGTCTGAAGAATTCACAATCGGTGGTGACATTAACGGCGTTGATGGCGGTGGAGGCAATGTCACATTTTGAGCAGCAGGCGCCATAG ATGGTGGTGGCGGTGGTGGTGGTGGTGTCGGCTGAGCAGATGGTGGAACATTCCGTGGTGATTCAACTGGTGTTTGTGTTTGTCCAGGTGGACTAATTGTTAATGGCTGTAACATTTGTATAGGCGGTGAAGGCTGGTCCGGACGTTGATTAGGTGATGCATTCAACCTGACCACTGTTGTATTC GGCTGTTGCTGCTGTGGTGGTGGTGGTATTGGAGCTTGAAATTGAG ] [-] EMBL CD127024 [ GGCGACATCACCGGCGCAGAGGGCGGCGAAGGCAATGTCACATTTTGAGCAGCAGGCGCCATAG ATGGTGGTGCCGGTGGTGGTGGTGGCGTCGACTGAGCAGATGGTGGAACACTCCGTGGTGATTCAACTGGTGTTTGTGTTTGCCCAGGTGGACTAATTGTTAATGGCTGTAACATTTGTATAGGCGGTGAAGGCTGGTCCGGACGTTGATTAGGTGATGCATTCAACCTGACCACTGTTGTATTCGGGCTGTTGCTGCTGTGGTGagagg ] [-] EMBL CD096347 [ GATGGTGGAACATTCCGTGGTGATTCAACTGGTGTTTGTGTTTGTCCAGGTGGACTAATTGTTAATGGCTGTAACATTTGTATAGGCGGTGAAGGCTGGTCCGGACGTTGATTAGGTGATGCATTCAACCTGACCACTGTTGTATTC GGCTGTTGCTGCTGTGGTGGTGGTGGTATTGGAGCTTGAAATTGAGGCCGAGGTGTTGGTTTTTGCATTGCTGGCGGTTGGAAATTTTGTTGTTGATGTTGTTGTGCCTGATACTGTTGTGTATTTGGTGCTGTTGTTTGTTTTTGATATTGAACATTATTCGGTTGAATATTTTGCGGTTGAGACTGTGGAGGTGGTGGTGTTCTTGGTGGTACACTAGAACGTCTATTAGTACGTAATTGTGATTGAACACGTGAATAGAGATTTTCTGTTTCT ] [-] EMBL BF936230 [ TGTTGCTGATGTGGTGGTGGTGGTATTGGAGCTTGAAATTGAGGCCGAGGTGTTGGTTTTTGCATTGCTGGCGGTTGGAAATTTTGTTGTTGATGTTGTTGTGCCTGATACTGTTGTGTATTTGGTGCTGTTGTTTGTTTTTGATATTGAACATTATTCGGTTGAATATTTTGCGGTTGAGACTGTGGAGGTGGTGGTGTTCTTGGTGGTACACTAGAACGTCTATTAGTACGTAATTGTGATTGAACACGTGAATAGAGATTTTCTGTTTCTTCAACATCTACACCAGCAGCAGACCGACCACGATTTTCAAGTTCTCGTTCTAAACGTCGTAAATCAAGTGCTTGAGCCTTTGGTTTACGAAAAGCTGATGAAAGTTCATCGCTACATTTTACCTTTTTCAATTGTGCAAGTTTTTTGAATGGATTTTCTGGTTCAACATGACGTAGATCTGGTCGAAAATCTAATTGTGGTTCAATAATTAATATTGTTTCAGCTGCAGCTTCAC ] [-] EMBL CD122920 [ GTATTTGGTGCTGTTGTTTGTTTTTGATATTGAACATTATTCGGTTGAATATTTTGCGGTTGAGACTGTGGGGGTGGTGGTGTTCTTGGTGGTACACTAGAACGTCTATTAGTACGTAATTGTGATTGAACACGTGAATAGAGATTTTCTGTTTCTTCGACATCTACACCAGCAGCAGACCGACCACGATTTTCAAGTTCTCGTTCTAAACGTCGTAAATCAAGTGCTTGAGCCTTTGGTTTACGAAAAGCTGATGAAAGTTCATCGCTACATTTTACCTTTTTCAATTGTGCAAGTTTTTTGAATGGATTTTCTGGTTCAACATGACGTAGATCTGGTCGAAAATCTAATTGTGGCTCAATAATTAATATTGTTTCAGCTGCAGCTTCACCCA TATTATTTCTTGCAACAGCTTTAATATGTAATTCACCAGGTGTACCAACACGATGAAATTCCAAATTACTAATACCACCATCTTGAAATATTCTCCAATTTCCGCCACCTCCAGACGAGGCTATCAATTCCCCATTAATATACCAGAATATTTTAGGCTTTGGATAACCACCTGCTTTAACAAGAAATTTAACTGGCGAACCTTCAGTGACAGT ] [+] EMBL CD117640 [ CTTGGTGGTACACTAGAACGTCTATTAGTACGTAATTGTGATTGAACACGTGAATAGAGATTTTCTGTTTCTTCAACATCTACACCAGCAGCAGACCGACCACGATTTTCAAGTTCTCGTTCTAAACGTCGTAAATCAAGTGCTTGAGCCTTTGGTTTACGAAAAGCTGATGAAAGTTCATCGCTACATTTTACCTTTTTCAATTGTGCAAGTTTTTTGAATGGATTTTCTGGTTCAACATGACGTAGATCTGGTCGAAAATCTAATTGTGGTTCAATAATTAATATTGTTTCAGCTGCAGCTTCACCCA TATTATTTCTTGCAACAGCTTTAATATGTAATTCACCAGGTGTACCAACACGATGAAATTCCAAATTACTAATACCACCATCTTGAAATATTCTCCAATTTCCGCCACCTCCAGACGAGGCTATCAATTCCCCATTAATATACCAGAATATTTTAGGCTTTGGATAACCACCTGCTTTAACAAGAAATTTAACTGGCGAACCTTCAGTGACAGTGACAGCAACAGGGAGAATATCGAATGATGGTGCACATGGCGGGTCTTCTTCATCTCTTTTAACTGTATCATAACCTGCCAT ] [-] EMBL CD078383 [ TCTGTTTCTTCAACATCTACACCAGCAGCAGACCGACCACGATTTTCAAGTTCTCGTTCTAAACGTCGTAAATCAAGTGCTTGAGCCTTTGGTTTACGAAAAGCTGATGAAAGTTCATCGCTACATTTTACCTTTTTCAATTGTGCAAGTTTTTTGAATGGATTTTCTGGTTCAACATGACGTAGATCTGGTCGAAAATCTAATTGTGGTTCAATAATTAATATTGTTTCAGCTGCAGCTTCACCCA TATTATTTCTTGCAACAGCTTTAATATGTAATTCACCAGGTGTACCAACACGATGAAATTCCAAATTACTAATACCACCATCTTGAAATATTCTCCAATTTCCGCCACCTCCAGACGAGGCTATCAATTCCCCATTAATATACCAGAATATTTTAGGCTTTGGATAACCACCTGCTTTAACAAGAAATTTAGCTGGCGAACCTTCAGTGACAGTGACAGCAACAGGGAGAATATCGAATGATGGTGCACATGGCGGTTCTTCTTCATCTCTTTTAACTGTATCATAACCTGCCATGGCATCACTTTCCCAAGCATCCAAACTTTGAAGATATGAAATTGATTCTTTC ] [-] EMBL CD078296 [ AACATNTACACCAGCAGCAGACCGACCACGATNTTCAAGTTCTCGTTCTAAACGTCGTAAATCAAGTGCTTGAGCCTTTGGTNTACGAAAAGCTGATGAAAGTTCATCGCTACATTTTACCTTTTTCAATTGTGCAAGTTTTTTGAATGGATTTTCTGGTTCAACATGACGTAGATCTGGTCGAAAATCTAATTGTGGTTCAATAATTAATATTGTTTCAGCTGCAGCTTCACCCA TATTATTTCTTGCAACAGCTTTAATATGTAATTCACCAGGTGTACCAACACGATGAAATTCCAAATTACTAATACCACCATCTTGAAATATTCTCCAATTTCCGCCACCTCCAGACGAGGCTATCAATTCCCCATTAATATACCAGAATATTTTAGGCTTTGGATAACCACCTGCTTTAACAAGAAATTTAGCTGGCGAACCTTCAGTGACAGTGACAGCAACAGGGAGAATATCGAATGATGGTGCACATGGCGGTTCTTCTTCATCTCTTTTAACTGTATCATAACCTGCCATGGCATCACTTTCCCAAGCATCCAAACTTTGAAGATATGAAATTGATTCTTTC ] [-] EMBL AW016961 [ ACCAGCAGCAGGCCGACCACGATTTTCAAGTTCTCGTTCTAAACGTCGTAAATCGAGTGCTTGAGCCTTTGGTCTACGAAAAGCTGATGAAAGTTCATCGATACATTTTACCTTTTTCAATTGTGCAAGTTTTGTGAATGGATTTTCTGGTTCAACATGACGTAGATCTGGTCGAAAATCTAATTGTGGTTCAATAATTAATATTGTTTCAGCTGCAGCTTCACCCA TATTATTTCTTGCAACAGCTTTAATATGTAATTCACCAGGTGTACCAACACGATGAAATTCCAAATTACTAATACCACCATCTTGAAATATTCTCCAATTTCCGCCACCTCCAGACGAGGCTATCAATTCCCCATTAATATACCAGAATATTTTAGGCTTTGGATAACCACCTGCTTTAACAAGAAATTTAACTGGCGAACCTTCAGTGACAGTGACAGCAACAGGGAGAATATCGAATGATGGTGCACATGGCGGTTCTTCTTCATCTCTTTTAACTGTATCATAACCTGCCATGGCATCACTTTCCCAAGCATCCAAACTTTGAAGATATGAAATTGA ] [-] EMBL CD086123 [ CCACGATTTTCAAGTTCTCGTTCTAAACGTCGTAAATCAAGTGCTTGAGCCTTTGGTTTACGAAAAGCTGATGAAAGTTCATCGCTACATTTTACCTTTTTCAATTGTGCAAGTTTTTTGAATGGATTTTCTGGTTCAACATGACGTAGATCTGGTCGAAAATCTAATTGTGGTTCAATAATTAATATTGTTTCAGCTGCAG TTCGCCCAGTA TATT ] [-] EMBL CD167011 [ TAAACGTCGTAAATCAAGTGCTTGAGCCTTTGGTTTACGAAAAGCTGATGAAAGTTCATCGCTACATTTTACCTTTTTCAATTGTGCAAGTTTTTTGAATGGATTTTCTGGTTCAACATGACGTAGATCTGGTCGAAAATCTAATTGTGGTTCAATAATTAATATTGTTTCAGCTGCAGCTTCACCCA TATTATTTCTTGCAACAGCTTTAATATGTAATTCACCAGGTGTACCAACACGATGAAATTCCAAATTACTAAT ] [-] EMBL CD167006 [ TTTTTGAATGGATTTTCTGGTTCAACATGACGTAGATCTGGTCGAAAATCTAATTGTGGTTCAATAATTAATATTGTTTCAGCTGCAGCTTCACCCA TATTATTTCTTGCAACAGCTTTAATATGTAATTCACCAGGTGTACCAACACGATGAAATTCCAAATTACTAAT ] [-] EMBL BF936218 [ GACGTAGATCTGGTCGAAAATCTAATTGTGGTTCAATAATTAATATTGTTTCAGCTGCAGCTTCACCCA TATTATTTCTTGCAACAGCTTTAATATGTAATTCACCAGGTGTACCAACACGATGAAATTCCAAATTACTAATACCACCATCTTGAAATATTCTCCAATTTCCGCCACCTCCAGACGAGGCTATCAATTCCCCATTAATATACCAGAATATTTTAGGCTTTGGATAACCACCTGCTTTAACAAGAAATTTAACTGGCGAACCTTCAGTGACAGTGACAGCAACAGGGAGAATATCGAATGATGGTGCACATGGCGGTTCTTCTTCATCTCTTTTAACTGTATCATAACCTGCCATGGCATCACTTTCCCAAGCATCCAAACTTTGAAGATATGAAATTGATTCTTTCGATAATACTGAACTAGTGACAATATGTTCATCCGCATTACATTGTAATTCAACCACATTGCTTTGTACTTGTCCTGCTGCATTACGTG ] [-] EMBL CD112649 [ AATTCCCCATTAATATACCAGAATATTTTAGGCTTTGGATAACCACCTGCTTTAACAAGAAATTTAACTGGCGAACCTTCAGTGACAGTGACAGCAACAGGGAGAATATCGAATGATGGTGCACATGGCGGTTCTTCTTCATCTCTTTTAACTGTATCATAACCTGCCATGGCATCACTTTCCCAAGCATCCAAACTTTGAAGATATGAAATTGATTCTTTCGATAATACTGAACTAGTGACAATATGTTCATCCGCATTACATTGTAATTCAAC TGGTG TTTGTGTTTGTCCAGGTGGACTAATTGTTAATGGCTGTAACATTTGTATAGGCGGTGAAGGCTGGTCCGGACGTTGATTAGGTGATGCATTCAACCTGACCACTGTTGTATTCG] consensusID : consensus_10991#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 614 fasta sequence [AATGATTGATTAGAGTAAAATGAAACTGAAGATTAGTGTAATCTGGGATTACAATGTTAG-AATTCTTTCGAAACCAATATAAATATTTAATTGATTATGGGTAAGCACTGATGATTCACTAGTATGTTTTGTTCTGTTCTGTTTTATTTTATTATTTTGTGTTTGTCACAAAATGAATTAAAGTTGAATAGTGAAGTCTGCGCTGACGGCATCAGAATAAGCCATTTGAGTAGGTGAAGGATCAGAGAATTGCATCATAGAATTCACAATCGGTGGTGACATTAACGGCGTTGATGGCGGTGGAGGCAATGTCACATTTTGAGCAGCAGGCGCCATANATGGTGGTGGCGGTGGTGGTGGTGGTGTCGGCTGAGCAGATGGTGGAACATTCCGTGGTGATTCAACTGGTGTTTGTGTTTGTCCAGGTGGACTAATTGTTAATGGCTGTAACATTTGTATAGGCGGTGAAGGCTGGTCCGGACGTTGATTAGGTGATGCATTCAACCTGACCACTGTTGTATTCGGCTGTTGCTGCTGTGGTGGTGGTGGTATTGGAGCTTGAAATTGAGGCCGAGGTGTTGGTTTTTGCATTGCTGGCGGTTGGAAATTTTGTT] [+] EMBL CD120902 [AATGATTGATTAGAGTAAAATGAAACTGAAGATTAGTGTAATCTGGGATTACAATGTTAG AATTCTTTCGAAACCAATATAAATATTTAATTGATTATGGGTAAGCACTGATGATTCACTAGTATGTTTTGTTCTGTTCTGTTTTATTTTATTATTTTGTGTTTGTCACAAAATGAATTAAAGTTGAATAGTGAAGTCTGCGCTGACGGCATCAGAATAAGCCATTTGAGTAGGTGAAGGATCAGAGAATTGCATCATAGAATTCACAATCGGTGGTGACATTAACGGCGTTGATGGCGGCGGAGGCAATGTCACATTTTGAGCAGCAGGCGCCATA ] [+] EMBL CD121021 [AATGATTGATTAGAGTAAAATGAAACTGAAGATTAGTGTAATCTGGGATTACAATGTTAG AATTCTTTCGAAACCAATATAAATATTTAATTGATTATGGGTAAGCACTGATGATTCACTAGTATGTTTTGTTCTGTTCTGTTTTATTTTATTATTATGTGTTTGTCACAAAATGAATTAAAGTTGAATAGTGAAGTCTGCGCTGACGGCATCAGAATAAGCCATTTGAGTAGGTGAAGGATCACAGAATTGCATCATATAATTCACAATCGGCGGTG ] [+] EMBL CD187753 [ TACAATGTTAGAAATTCTTTCGAAACCAATATAAATATTTAATTGATTATGGGTAAGCACTGATGATTCACTAGTATGTTTTGTTCTGTTCTGTTTTATTTTATTATTTTGTGTTTGTCACAAAATGAATTAAAGTTGAATAGTGAAGTCTGCGCTGACGGCATCAGAATAAGCCATTTGAGTAGGTGAAGGATCAGAGAATTGCATCATAGAATTCACAATCGGTGGTGACATTAACGGCGTTGATGGCGGTGGAGGCAATGTCACATTTTGAGCAGCAGGCGCCATANATGGTGGTGGCGGTGGTGGTGGTGGTGTCGGCTGAGCAGATGGTGGAACATTCCGTGGTGATTCAACTGGTGTTTGTGTTTGTCCAGGTGGACTAATTGTTAATGGCTGTAACATTTGTATAGGCGGTGAAGGCTGGTCCGGACGTTGATTANGTGATGCATTCAACC ] [+] EMBL CD183839 [ GTGAAGGATCAGAGAATTGCATCATAGAATTCACAATCGGTGGTGACATTAACGGCGTTGATGGCGGTGGAGGCAATGTCACATTTTGAGCAGCAGGCGCCATAGATGGTGGTGGCGGTGGTGGTGGTGGTGTCGGCTGAGCAGATGGTGGAACATTCCGTGGTGATTCAACTGGTGTTTGTGTTTGTCCAGGTGGACTAATTGTTAATGGCTGTAACATTTGTATAGGCGGTGAAGGCTGGTCCGGACGTTGATTAGGTGATGCATTCAACCTGACCACTGTTGTATTCGGCTGTTGCTGCTGTGGTGGTGGTGGTATTGGAGCTTGAAATTGAGGCCGAGGTGTTGGTTTTTGCATTGCTGGCGGTTGGAAATTTTGTT] [-] EMBL CD130107 [ TGGCGGTGGTGGTGGTGGTGTCGGCTGAGCAGATGGTGGAACATTCCGTGGTGATTCAACTGGTGTTTGTGTTTGTCCAGGTGGACTAATTGTTAATGGCTGTAACATTTGTATAGGCGGTGAAGGCTGGTCCGGACGTTGATTAGGTGATGCATTCAACCTGACCA ] consensusID : consensus_10991#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 232 fasta sequence [CYAGGCGCGTACCCGGTTGAACAGTGTGTGTAGTTGAATGT-AACTATCCTGGTTTGTAATGAATTTAGCATYTTTTGTAATTTTTTTTTAGTGGATTCATGTCATGTTATGTACTTTAGCGAATTCACCCGGTTACAGCATTGATGATAATAGTAATAATAATAACGATAGTTTTCAAAAGGGGAAGACATTCATGAAGCCAAATGCAAGTGTTGAGAATATGTTTAGTTTT] [-] EMBL BE519391 [CYAGGCGCGTACCCGGTTGAACAGTGTGTGTAGTTGAATGT AACTATCCTGGTTTGTAATGAATTTAGCATYTTTTGTAATTTTTTTTTAGTGGATTCATGTCATGTTATGTACTTTAGCGAATTCACCCGGTTACAGCATTGATGATAATAGTAATAATAATAACGATAGTTTTCAAAAGGGGAAGACATTCATGAAGCCAAATGCAAGTGTTGAGAATATGTTTAGTTTT] [+] EMBL CD120798 [ TTGAATGTAAACTATCTTGTTTTGTAATGAATTTAGCATTTTTTGTATTTTTTTTTTAGTGGATTCATGTCATGTTATGTACTTTAGCGAATTCACCCGGTTACAGCATTGATGATAATAGTAATAATAATAACGATAGTTTTCAAAAGGG ] consensusID : consensus_10991#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 230 fasta sequence [TGTAACCGGGTGTAATTCGCTAAAGTACATAACATGACATGAATCCACTAAAAAAAAATACAAAAAATGCTAAATTCATTACAAAACAAGATAGTTTACNTTCAACTACNCTCACTGAACAACAACTAGACAATATATNGCATGNCATNTTCNCTCAATTTATCGGNTTACGGGTTCACTTTTTNCCCGCCAATTACCTTTTCTCCNNCCGTCAACAGAAACGAAACGAA] [+] EMBL AA559762 [TGTAACCGGGTGTAATTCGCTAAAGTACATAACATGACATGAATCCACTAAAAAAAAATACAAAAAATGCTAAATTCATTACAAAACAAGATAGTTTACNTTCAACTACNCTCACTGAACAACAACTAGACAATATATNGCATGNCATNTTCNCTCAATTTATCGGNTTACGGGTTCACTTTTTNCCCGCCAATTACCTTTTCTCCNNCCGTCAACAGAAACGAAACGAA] consensusID : consensus_10991#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 228 fasta sequence [ATTTGTGACTTATTTTTTACTATTTACAATGYTAYTTGAGATGATTATATATAAATAAACTTACTGGTCTTCTGGMCAGATCTGTYATCATTAAGATTTATACACACAGGCAAAACTAAACATATCCTCAACACTTGCATTTGGGTTCATGTATGTCTTCCCCTTNAGCCTTCGTTCAAACCATAAATTTATTACAAATAGAACGANATATGTNGTACATAGCGGACC] [+] EMBL SMRAP154 [ATTTGTGACTTATTTTTTACTATTTACAATGYTAYTTGAGATGATTATATATAAATAAACTTACTGGTCTTCTGGMCAGATCTGTYATCATTAAGATTTATACACACAGGCAAAACTAAACATATCCTCAACACTTGCATTTGGGTTCATGTATGTCTTCCCCTTNAGCCTTCGTTCAAACCATAAATTTATTACAAATAGAACGANATATGTNGTACATAGCGGACC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_10991#0 ATGTCATGTTATGTACTTTAGCGAATTCACCCGGTTACAGCATTGATGATAATAGTAATA 60 consensus_10991#1 ------------------------------------------------------------ consensus_10991#2 ------------------------------------------------------------ consensus_10991#3 ------------------------------------------------------------ consensus_10991#4 ------------------------------------------------------------ consensus_10991#0 ATAATAACGATAGTTTTCAAAAGGGGAAGACATACATGAAGCCAAATGCAAGTGTTGAGA 120 consensus_10991#1 ------------------------------------------------------------ consensus_10991#2 ------------------------------------------------------------ consensus_10991#3 ------------------------------------------------------------ consensus_10991#4 ------------------------------------------------------------ consensus_10991#0 ATATGTTTAGTTTTGCCTGTTTGTAAAAGCTTAATGATTGATTAGAGTAAAATGAAACTG 180 consensus_10991#1 --------------------------------AATGATTGATTAGAGTAAAATGAAACTG 28 consensus_10991#2 ------------------------------------------------------------ consensus_10991#3 ------------------------------------------------------------ consensus_10991#4 ------------------------------------------------------------ consensus_10991#0 AAGATTAGTGTAATCTGGGATTACAATGTTAGAATTCTTTCGAAACCAATATAAATATTT 240 consensus_10991#1 AAGATTAGTGTAATCTGGGATTACAATGTTAGAATTCTTTCGAAACCAATATAAATATTT 88 consensus_10991#2 ------------------------------------------------------------ consensus_10991#3 ------------------------------------------------------------ consensus_10991#4 ------------------------------------------------------------ consensus_10991#0 AATTGATTATGGGTAAGCACTGATGATTCACTAGTATGTTTTGTTCTGTTCTGTTTTATT 300 consensus_10991#1 AATTGATTATGGGTAAGCACTGATGATTCACTAGTATGTTTTGTTCTGTTCTGTTTTATT 148 consensus_10991#2 ------------------------------------------------------------ consensus_10991#3 ------------------------------------------------------------ consensus_10991#4 ------------------------------------------------------------ consensus_10991#0 TTATTATTTTGTGTTTGTCACAAAATGAATTAAAGTTGAATAGTGAAGTCTGCGCTGACG 360 consensus_10991#1 TTATTATTTTGTGTTTGTCACAAAATGAATTAAAGTTGAATAGTGAAGTCTGCGCTGACG 208 consensus_10991#2 ------------------------------------------------------------ consensus_10991#3 ------------------------------------------------------------ consensus_10991#4 ------------------------------------------------------------ consensus_10991#0 GCATCAGAATAAGCCATTTGAGTAGGTGAAGGATCAGAGAATTGCATCATTGTGTTGACA 420 consensus_10991#1 GCATCAGAATAAGCCATTTGAGTAGGTGAAGGATCAGAGAATTGCATCAT---------- 258 consensus_10991#2 ------------------------------------------------------------ consensus_10991#3 ------------------------------------------------------------ consensus_10991#4 ------------------------------------------------------------ consensus_10991#0 AAACCTATGAATTAGTCTGAAGAATTCACAATCGGTGGTGACATTAACGGCGTTGATGGC 480 consensus_10991#1 --------------------AGAATTCACAATCGGTGGTGACATTAACGGCGTTGATGGC 298 consensus_10991#2 ------------------------------------------------------------ consensus_10991#3 ------------------------------------------------------------ consensus_10991#4 ------------------------------------------------------------ consensus_10991#0 GGTGGAGGCAATGTCACATTTTGAGCAGCAGGCGCCATAGATGGTGGTGGCGGTGGTGGT 540 consensus_10991#1 GGTGGAGGCAATGTCACATTTTGAGCAGCAGGCGCCATANATGGTGGTGGCGGTGGTGGT 358 consensus_10991#2 ------------------------------------------------------------ consensus_10991#3 ------------------------------------------------------------ consensus_10991#4 ------------------------------------------------------------ consensus_10991#0 GGTGGTGTCGACTGAGCAGATGGTGGAACATTCCGTGG--TGATTCAACTGGTGTTTGTG 598 consensus_10991#1 GGTGGTGTCGGCTGAGCAGATGGTGGAACATTCCGTGG--TGATTCAACTGGTGTTTGTG 416 consensus_10991#2 -------CYAGGCGCGTACCCGGTTGAACAGTGTGTG---TAGTTGAAT--GTAACTATC 48 consensus_10991#3 --------------TGTAACCGG--GTGTAATTCGCTA--AAGTACATAACATG---ACA 39 consensus_10991#4 ------------------------------ATTTGTGACTTATTTTTTACTATTTACAAT 30 * * * * consensus_10991#0 TTTGTCCAGGTGGACTAATTGTTAATGGCTGTAACATTTGTATAGGCGGTGAAGGCTGGT 658 consensus_10991#1 TTTGTCCAGGTGGACTAATTGTTAATGGCTGTAACATTTGTATAGGCGGTGAAGGCTGGT 476 consensus_10991#2 CTGGTTT--GTAATGAATTTAGCATYTTTTGTAATTTTTTTTTAGTGGATTCATGTCATG 106 consensus_10991#3 TGAATCCACTAAAAAAAAATACAAAAAATGCTAAATTCATTACAAAACAAGATAGTTTAC 99 consensus_10991#4 GYTAYTTGAGATGATTATATATAAATAAACTTACTGGTCTTCT-GGMCAGATCTGTYATC 89 * * * ** * * consensus_10991#0 CCGGACGTTGATTAGGTGATGCATTCAACCTGACCAC-TGTTGTATTCGGCTGTTGCTGC 717 consensus_10991#1 CCGGACGTTGATTAGGTGATGCATTCAACCTGACCAC-TGTTGTATTCGGCTGTTGCTGC 535 consensus_10991#2 TT--ATGTACTTTAGCGAATTCACCCGGTTACAGCAT-TGATGATAATAGTAATAATAAT 163 consensus_10991#3 NTTCAACTACNCTCACTGAACAA--CAACTAGACAATATATNGCATGNCATNTTCNCTCA 157 consensus_10991#4 ATTAAGATTTATACACACAGGCA--AAACTAAACATATCCTCAACACTTGCATTTGGGTT 147 * * * * * * consensus_10991#0 TGTGGTGGTGGT-GGTATTGGAGCTTGAAATTGAGGCCGAGGTGTTGGTTTTTGCATTGC 776 consensus_10991#1 TGTGGTGGTGGT-GGTATTGGAGCTTGAAATTGAGGCCGAGGTGTTGGTTTTTGCATTGC 594 consensus_10991#2 AACGATAGTTTTCAAAAGGGGAAGACATTCATGAAGCCAAA-TGCAAGTGTTGAGAATAT 222 consensus_10991#3 ATTTATCGGNTT----ACGGGTTCACTTTTTNCCCGCCAAT-TACCTTTTCTCCNNCCGT 212 consensus_10991#4 CATGTATGTCTTCCCCTTNAGCCTTCGTTCAAACCATAAATTTATTACAAATAGAACGAN 207 * * * * * * consensus_10991#0 TGGCG-GTTGGAAATTTTGTTGTTGATGTTGTTGTGCCTGATACTGTTGTGTATTTGGTG 835 consensus_10991#1 TGGCG-GTTGGAAATTTTGTT--------------------------------------- 614 consensus_10991#2 GTTTA-GTTTT------------------------------------------------- 232 consensus_10991#3 CAACA-GAAACGAAACGAA----------------------------------------- 230 consensus_10991#4 ATATGTNGTACATAGCGGACC--------------------------------------- 228 consensus_10991#0 CTGTTGTTTGTTTTTGATATTGAACATTATTCGGTTGAATATTTTGCGGTTGAGACTGTG 895 consensus_10991#1 ------------------------------------------------------------ consensus_10991#2 ------------------------------------------------------------ consensus_10991#3 ------------------------------------------------------------ consensus_10991#4 ------------------------------------------------------------ consensus_10991#0 GAGGTGGTGGTGTTCTTGGTGGTACACTAGAACGTCTATTAGTACGTAATTGTGATTGAA 955 consensus_10991#1 ------------------------------------------------------------ consensus_10991#2 ------------------------------------------------------------ consensus_10991#3 ------------------------------------------------------------ consensus_10991#4 ------------------------------------------------------------ consensus_10991#0 CACGTGAATAGAGATTTTCTGTTTCTTCAACATCTACACCAGCAGCAGACCGACCACGAT 1015 consensus_10991#1 ------------------------------------------------------------ consensus_10991#2 ------------------------------------------------------------ consensus_10991#3 ------------------------------------------------------------ consensus_10991#4 ------------------------------------------------------------ consensus_10991#0 TTTCAAGTTCTCGTTCTAAACGTCGTAAATCAAGTGCTTGAGCCTTTGGTTTACGAAAAG 1075 consensus_10991#1 ------------------------------------------------------------ consensus_10991#2 ------------------------------------------------------------ consensus_10991#3 ------------------------------------------------------------ consensus_10991#4 ------------------------------------------------------------ consensus_10991#0 CTGATGAAAGTTCATCGCTACATTTTACCTTTTTCAATTGTGCAAGTTTTTTGAATGGAT 1135 consensus_10991#1 ------------------------------------------------------------ consensus_10991#2 ------------------------------------------------------------ consensus_10991#3 ------------------------------------------------------------ consensus_10991#4 ------------------------------------------------------------ consensus_10991#0 TTTCTGGTTCAACATGACGTAGATCTGGTCGAAAATCTAATTGTGGTTCAATAATTAATA 1195 consensus_10991#1 ------------------------------------------------------------ consensus_10991#2 ------------------------------------------------------------ consensus_10991#3 ------------------------------------------------------------ consensus_10991#4 ------------------------------------------------------------ consensus_10991#0 TTGTTTCAGCTGCAGCTTCACCCATATTATTTCTTGCAACAGCTTTAATATGTAATTCAC 1255 consensus_10991#1 ------------------------------------------------------------ consensus_10991#2 ------------------------------------------------------------ consensus_10991#3 ------------------------------------------------------------ consensus_10991#4 ------------------------------------------------------------ consensus_10991#0 CAGGTGTACCAACACGATGAAATTCCAAATTACTAATACCACCATCTTGAAATATTCTCC 1315 consensus_10991#1 ------------------------------------------------------------ consensus_10991#2 ------------------------------------------------------------ consensus_10991#3 ------------------------------------------------------------ consensus_10991#4 ------------------------------------------------------------ consensus_10991#0 AATTTCCGCCACCTCCAGACGAGGCTATCAATTCCCCATTAATATACCAGAATATTTTAG 1375 consensus_10991#1 ------------------------------------------------------------ consensus_10991#2 ------------------------------------------------------------ consensus_10991#3 ------------------------------------------------------------ consensus_10991#4 ------------------------------------------------------------ consensus_10991#0 GCTTTGGATAACCACCTGCTTTAACAAGAAATTTAACTGGCGAACCTTCAGTGACAGTGA 1435 consensus_10991#1 ------------------------------------------------------------ consensus_10991#2 ------------------------------------------------------------ consensus_10991#3 ------------------------------------------------------------ consensus_10991#4 ------------------------------------------------------------ consensus_10991#0 CAGCAACAGGGAGAATATCGAATGATGGTGCACATGGCGGTTCTTCTTCATCTCTTTTAA 1495 consensus_10991#1 ------------------------------------------------------------ consensus_10991#2 ------------------------------------------------------------ consensus_10991#3 ------------------------------------------------------------ consensus_10991#4 ------------------------------------------------------------ consensus_10991#0 CTGTATCATAACCTGCCATGGCATCACTTTCCCAAGCATCCAAACTTTGAAGATATGAAA 1555 consensus_10991#1 ------------------------------------------------------------ consensus_10991#2 ------------------------------------------------------------ consensus_10991#3 ------------------------------------------------------------ consensus_10991#4 ------------------------------------------------------------ consensus_10991#0 TTGATTCTTTCGATAATACTGAACTAGTGACAATATGTTCATCCGCATTACATTGTAATT 1615 consensus_10991#1 ------------------------------------------------------------ consensus_10991#2 ------------------------------------------------------------ consensus_10991#3 ------------------------------------------------------------ consensus_10991#4 ------------------------------------------------------------ consensus_10991#0 CAACCACATTGCTTTGTACTTGTCCTGCTGCATTACGTGTTAATGGCTGTAACATTTGTA 1675 consensus_10991#1 ------------------------------------------------------------ consensus_10991#2 ------------------------------------------------------------ consensus_10991#3 ------------------------------------------------------------ consensus_10991#4 ------------------------------------------------------------ consensus_10991#0 TAGGCGGTGAAGGCTGGTCCGGACGTTGATTAGGTGATGCATTCAACCTGACCACTGTTG 1735 consensus_10991#1 ------------------------------------------------------------ consensus_10991#2 ------------------------------------------------------------ consensus_10991#3 ------------------------------------------------------------ consensus_10991#4 ------------------------------------------------------------ consensus_10991#0 TATTCG 1741 consensus_10991#1 ------ consensus_10991#2 ------ consensus_10991#3 ------ consensus_10991#4 ------ |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||